AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene33709

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene33709.t1 MTR_4g014580 98.214 56 1 0 6 61 139 194 1.58e-29 112
MS.gene33709.t1 MTR_4g014580 77.358 53 7 1 73 125 679 726 2.05e-20 86.3
MS.gene33709.t1 MTR_4g014990 75.758 66 16 0 73 138 1033 1098 9.38e-26 101
MS.gene33709.t1 MTR_4g014990 50.442 113 35 3 3 101 184 289 2.88e-23 94.7
MS.gene33709.t1 MTR_4g015030 62.500 88 19 2 3 76 211 298 4.62e-24 96.7
MS.gene33709.t1 MTR_4g015030 66.667 66 19 1 73 138 1054 1116 1.97e-21 89.4
MS.gene33709.t1 MTR_4g014570 62.500 88 19 2 3 76 224 311 1.85e-23 95.1
MS.gene33709.t1 MTR_4g014570 64.615 65 21 1 73 137 1075 1137 6.73e-22 90.5
MS.gene33709.t1 MTR_4g014990 50.442 113 35 3 3 101 184 289 2.95e-23 94.4
MS.gene33709.t1 MTR_6g015475 59.770 87 21 2 3 75 188 274 8.10e-23 93.2
MS.gene33709.t1 MTR_4g015060 77.966 59 13 0 3 61 195 253 3.94e-22 91.3
MS.gene33709.t1 MTR_4g015060 57.627 59 24 1 78 136 1052 1109 7.13e-15 70.5
MS.gene33709.t1 MTR_6g015665 49.515 103 35 3 3 91 239 338 4.75e-22 91.3
MS.gene33709.t1 MTR_6g015510 76.271 59 14 0 3 61 195 253 1.43e-21 89.7
MS.gene33709.t1 MTR_6g015430 52.475 101 31 3 5 91 17 114 2.82e-21 89.0
MS.gene33709.t1 MTR_6g015435 53.333 105 30 4 3 91 181 282 3.31e-21 88.6
MS.gene33709.t1 MTR_6g015490 51.485 101 32 3 5 91 17 114 3.85e-21 88.6
MS.gene33709.t1 MTR_6g015430 50.485 103 34 3 3 91 208 307 7.34e-21 87.8
MS.gene33709.t1 MTR_6g015490 49.515 103 35 3 3 91 241 340 1.04e-20 87.4
MS.gene33709.t1 MTR_4g415060 64.407 59 20 1 78 136 21 78 3.19e-20 79.0
MS.gene33709.t1 MTR_6g015750 40.580 138 65 4 3 138 160 282 1.11e-19 84.3
MS.gene33709.t1 MTR_6g015680 48.571 105 35 4 3 91 189 290 1.24e-19 84.3
MS.gene33709.t1 MTR_6g015680 51.667 60 29 0 74 133 1044 1103 5.99e-14 67.8
MS.gene33709.t1 MTR_6g015405 50.476 105 33 4 3 91 194 295 2.04e-19 83.6
MS.gene33709.t1 MTR_6g015405 58.537 41 17 0 73 113 1040 1080 1.73e-11 60.8
MS.gene33709.t1 MTR_6g015745 50.476 105 33 4 3 91 197 298 2.09e-19 83.6
MS.gene33709.t1 MTR_6g015730 67.797 59 19 0 3 61 463 521 1.24e-18 81.3
MS.gene33709.t1 MTR_6g015695 48.571 105 35 4 3 91 196 297 2.20e-18 80.5
MS.gene33709.t1 MTR_7g088950 50.000 94 33 2 3 82 1162 1255 2.54e-18 80.5
MS.gene33709.t1 MTR_7g088950 51.724 87 28 2 3 75 159 245 1.86e-17 77.8
MS.gene33709.t1 MTR_7g088950 47.872 94 35 2 3 82 660 753 6.82e-17 76.3
MS.gene33709.t1 MTR_7g088950 50.000 94 33 2 3 82 1162 1255 2.61e-18 80.5
MS.gene33709.t1 MTR_7g088950 51.724 87 28 2 3 75 159 245 1.90e-17 77.8
MS.gene33709.t1 MTR_7g088950 47.872 94 35 2 3 82 660 753 6.82e-17 76.3
MS.gene33709.t1 MTR_7g088950 50.000 94 33 2 3 82 1162 1255 2.77e-18 80.5
MS.gene33709.t1 MTR_7g088950 51.724 87 28 2 3 75 159 245 2.10e-17 77.8
MS.gene33709.t1 MTR_7g088950 47.872 94 35 2 3 82 660 753 7.52e-17 76.3
MS.gene33709.t1 MTR_7g088950 50.000 94 33 2 3 82 660 753 2.90e-18 80.1
MS.gene33709.t1 MTR_7g088950 51.724 87 28 2 3 75 159 245 2.21e-17 77.8
MS.gene33709.t1 MTR_7g088950 50.000 94 33 2 3 82 661 754 2.90e-18 80.1
MS.gene33709.t1 MTR_7g088950 48.936 94 34 2 3 82 159 252 1.67e-17 78.2
MS.gene33709.t1 MTR_7g088950 50.000 94 33 2 3 82 1128 1221 3.08e-18 80.1
MS.gene33709.t1 MTR_7g088950 51.724 87 28 2 3 75 159 245 2.38e-17 77.8
MS.gene33709.t1 MTR_7g088950 47.872 94 35 2 3 82 626 719 8.61e-17 76.3
MS.gene33709.t1 MTR_7g088950 50.000 94 33 2 3 82 626 719 3.10e-18 80.1
MS.gene33709.t1 MTR_7g088950 51.724 87 28 2 3 75 159 245 2.32e-17 77.8
MS.gene33709.t1 MTR_7g088950 50.000 94 33 2 3 82 1162 1255 3.14e-18 80.1
MS.gene33709.t1 MTR_7g088950 51.724 87 28 2 3 75 159 245 2.45e-17 77.8
MS.gene33709.t1 MTR_7g088950 47.872 94 35 2 3 82 660 753 8.70e-17 76.3
MS.gene33709.t1 MTR_7g088950 50.000 94 33 2 3 82 660 753 3.16e-18 80.1
MS.gene33709.t1 MTR_7g088950 51.724 87 28 2 3 75 159 245 2.39e-17 77.8
MS.gene33709.t1 MTR_7g088950 50.000 94 33 2 3 82 626 719 3.45e-18 80.1
MS.gene33709.t1 MTR_7g088950 51.724 87 28 2 3 75 159 245 2.58e-17 77.4
MS.gene33709.t1 MTR_7g088950 50.000 94 33 2 3 82 626 719 3.48e-18 80.1
MS.gene33709.t1 MTR_7g088950 51.724 87 28 2 3 75 159 245 2.69e-17 77.4
MS.gene33709.t1 MTR_6g015670 48.421 95 33 3 4 82 15 109 4.93e-18 77.0
MS.gene33709.t1 MTR_6g015410 48.485 99 37 2 5 89 157 255 5.72e-18 79.3
MS.gene33709.t1 MTR_6g015590 66.102 59 20 0 3 61 91 149 2.44e-17 77.4
MS.gene33709.t1 MTR_4g020850 62.295 61 23 0 1 61 150 210 2.49e-17 77.8
MS.gene33709.t1 MTR_4g020850 57.627 59 25 0 3 61 878 936 9.84e-15 70.1
MS.gene33709.t1 MTR_4g023400 48.980 98 36 2 6 89 668 765 3.27e-17 77.4
MS.gene33709.t1 MTR_4g023400 43.548 62 34 1 1 61 161 222 9.57e-11 58.9
MS.gene33709.t1 MTR_4g023400 48.485 99 37 2 6 90 668 766 3.37e-17 77.4
MS.gene33709.t1 MTR_4g023400 43.548 62 34 1 1 61 161 222 8.72e-11 58.9
MS.gene33709.t1 MTR_4g015050 78.431 51 11 0 5 55 102 152 5.87e-17 76.6
MS.gene33709.t1 MTR_6g015455 54.545 88 22 4 5 76 539 624 9.63e-17 75.9
MS.gene33709.t1 MTR_4g020700 55.738 61 27 0 1 61 670 730 1.06e-16 75.9
MS.gene33709.t1 MTR_4g020700 55.738 61 27 0 1 61 670 730 1.10e-16 75.9
MS.gene33709.t1 MTR_4g021170 64.407 59 20 1 3 61 651 708 1.71e-16 75.1
MS.gene33709.t1 MTR_4g020590 59.322 59 24 0 3 61 660 718 1.89e-16 75.1
MS.gene33709.t1 MTR_4g020590 59.322 59 24 0 3 61 660 718 1.97e-16 75.1
MS.gene33709.t1 MTR_4g020590 59.322 59 24 0 3 61 660 718 2.00e-16 75.1
MS.gene33709.t1 MTR_4g020590 59.322 59 24 0 3 61 660 718 2.04e-16 75.1
MS.gene33709.t1 MTR_4g020590 59.322 59 24 0 3 61 660 718 2.07e-16 75.1
MS.gene33709.t1 MTR_4g020490 57.627 59 25 0 3 61 835 893 2.48e-16 74.7
MS.gene33709.t1 MTR_4g020640 61.017 59 23 0 3 61 690 748 5.14e-16 73.9
MS.gene33709.t1 MTR_4g020640 61.017 59 23 0 3 61 690 748 5.33e-16 73.9
MS.gene33709.t1 MTR_4g021095 36.111 144 55 3 6 112 618 761 6.43e-16 73.6
MS.gene33709.t1 MTR_4g020535 54.098 61 28 0 1 61 146 206 1.49e-15 72.4
MS.gene33709.t1 MTR_4g020590 60.714 56 22 0 6 61 656 711 1.53e-15 72.4
MS.gene33709.t1 MTR_4g020550 57.143 63 27 0 3 65 633 695 1.85e-15 72.4
MS.gene33709.t1 MTR_4g415070 69.091 55 17 0 3 57 180 234 2.44e-15 71.2
MS.gene33709.t1 MTR_0373s0040 53.030 66 31 0 3 68 68 133 7.94e-15 70.1
MS.gene33709.t1 MTR_4g021057 57.627 59 25 0 3 61 692 750 1.04e-14 70.1
MS.gene33709.t1 MTR_4g021057 57.627 59 25 0 3 61 692 750 1.26e-14 69.7
MS.gene33709.t1 MTR_4g021023 55.932 59 26 0 3 61 694 752 1.30e-14 69.7
MS.gene33709.t1 MTR_4g021023 55.932 59 26 0 3 61 443 501 1.30e-14 69.7
MS.gene33709.t1 MTR_0294s0010 66.071 56 19 0 6 61 16 71 4.99e-14 68.2
MS.gene33709.t1 MTR_6g015600 59.322 59 23 1 3 61 14 71 5.06e-14 68.2
MS.gene33709.t1 MTR_6g015580 61.404 57 21 1 5 61 12 67 7.87e-14 67.4
MS.gene33709.t1 MTR_6g016000 66.038 53 18 0 3 55 193 245 8.25e-14 67.4
MS.gene33709.t1 MTR_6g016000 66.038 53 18 0 3 55 193 245 8.82e-14 67.4
MS.gene33709.t1 MTR_6g015580 59.322 59 23 1 3 61 176 233 2.47e-13 66.2
MS.gene33709.t1 MTR_6g015580 59.322 59 23 1 3 61 176 233 2.51e-13 66.2
MS.gene33709.t1 MTR_4g020750 59.259 54 22 0 8 61 26 79 6.92e-13 63.9
MS.gene33709.t1 MTR_2g450830 57.895 57 23 1 5 61 213 268 3.18e-12 62.8
MS.gene33709.t1 MTR_3g104170 42.188 64 37 0 73 136 112 175 8.17e-12 59.7
MS.gene33709.t1 MTR_3g104240 42.188 64 37 0 73 136 112 175 8.17e-12 59.7
MS.gene33709.t1 MTR_3g104130 42.188 64 37 0 73 136 112 175 1.03e-11 59.7
MS.gene33709.t1 MTR_3g104210 42.188 64 37 0 73 136 112 175 1.03e-11 59.7
MS.gene33709.t1 MTR_4g068200 59.649 57 22 1 6 61 189 245 1.88e-11 60.8
MS.gene33709.t1 MTR_6g015775 66.667 42 14 0 6 47 169 210 2.52e-11 60.5
MS.gene33709.t1 MTR_6g015505 38.889 90 29 3 73 136 815 904 5.96e-11 59.3
MS.gene33709.t1 MTR_6g015575 53.191 47 22 0 73 119 89 135 8.06e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 21 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAACCAGTTGGCGAAAATT+TGG 0.190447 4.3:+83765454 MS.gene33709:CDS
GAACCAGTTGGCGAAAATTT+GGG 0.281243 4.3:+83765455 MS.gene33709:CDS
TCAAATGATGTTCTACTACT+AGG 0.345615 4.3:+83761625 MS.gene33709:CDS
CAAATGATGTTCTACTACTA+GGG 0.394559 4.3:+83761626 MS.gene33709:CDS
ACTCGAGATTCGACTCTAAC+TGG 0.410087 4.3:-83761568 None:intergenic
GCTAGATATGATTCAACTAC+TGG 0.438544 4.3:+83761591 MS.gene33709:CDS
CCAGATGAGAATGTTCTTGT+TGG 0.462623 4.3:+83765491 MS.gene33709:CDS
CCAACAAGAACATTCTCATC+TGG 0.482187 4.3:-83765491 None:intergenic
ATGTTCTACTACTAGGGATG+TGG 0.495044 4.3:+83761632 MS.gene33709:CDS
GATCACTCTTCAAGTAGAGC+TGG 0.504877 4.3:+83765547 MS.gene33709:CDS
GAATGAAAGTGAGGATATCA+AGG 0.505347 4.3:+83761486 MS.gene33709:CDS
TAGAACATCATTTGAAAATG+AGG 0.513160 4.3:-83761617 None:intergenic
AACCAGTTGGCGAAAATTTG+GGG 0.551858 4.3:+83765456 MS.gene33709:CDS
TGAAGAGTGATCCTCTTGGC+AGG 0.553675 4.3:-83765536 None:intergenic
CTCATATATGATGAACCAGT+TGG 0.562231 4.3:+83765443 MS.gene33709:CDS
TGTTCTACTACTAGGGATGT+GGG 0.587460 4.3:+83761633 MS.gene33709:CDS
CCACAGTGATGTCAAATCCC+AGG 0.592105 4.3:+83760031 None:intergenic
GAGAATGTTCTTGTTGGTGA+TGG 0.605342 4.3:+83765497 MS.gene33709:CDS
TACTTGAAGAGTGATCCTCT+TGG 0.627194 4.3:-83765540 None:intergenic
AAAATGAATGTCCTGCCAAG+AGG 0.655746 4.3:+83765525 MS.gene33709:CDS
GTTCTACTACTAGGGATGTG+GGG 0.657484 4.3:+83761634 MS.gene33709:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAATAAATATATAAATAA+AGG - chr4.3:83763807-83763826 None:intergenic 0.0%
!!! AAAAAAAAAAGTTTTATACT+TGG - chr4.3:83763100-83763119 None:intergenic 10.0%
!!! ATAATTTGTTATTTCATTAT+TGG + chr4.3:83763210-83763229 MS.gene33709:intron 10.0%
!!! TTGGTTTATTTTTTTTTAAT+AGG + chr4.3:83761464-83761483 MS.gene33709:intron 10.0%
!! AGTAAACAATTAAAAGAAAA+TGG + chr4.3:83760619-83760638 MS.gene33709:intron 15.0%
!! ATAAAAATGATTATGTTATG+AGG + chr4.3:83764975-83764994 MS.gene33709:intron 15.0%
!! CTGTTTAATTATTAACAAAT+TGG + chr4.3:83764115-83764134 MS.gene33709:intron 15.0%
!! CTTATTCATAAACAAATTAT+AGG - chr4.3:83761287-83761306 None:intergenic 15.0%
!! GTAAACAATTAAAAGAAAAT+GGG + chr4.3:83760620-83760639 MS.gene33709:intron 15.0%
!! TAATGAGAATTTAAAAGTTT+AGG - chr4.3:83763432-83763451 None:intergenic 15.0%
!!! AAATTTGTTTACAATAAAGT+TGG + chr4.3:83761688-83761707 MS.gene33709:intron 15.0%
!!! AATAAATATGCATTTTTCAT+TGG + chr4.3:83761445-83761464 MS.gene33709:intron 15.0%
!!! ATCTAAAACTTAAATGAATT+GGG + chr4.3:83763049-83763068 MS.gene33709:intron 15.0%
!!! CTTTTGATTTTTTTATTTGT+TGG - chr4.3:83760854-83760873 None:intergenic 15.0%
!!! GTTTCTTTTAAAGTTTTTAT+AGG - chr4.3:83760455-83760474 None:intergenic 15.0%
!!! TTATTGTATCTAATTTTGAA+GGG - chr4.3:83760061-83760080 None:intergenic 15.0%
!!! TTTTTAATACCGATATAAAA+TGG - chr4.3:83763532-83763551 None:intergenic 15.0%
!! AATTATTAACAAATTGGAAG+AGG + chr4.3:83764121-83764140 MS.gene33709:intron 20.0%
!! AGAAAAGAAAGAAAATACAA+AGG - chr4.3:83761111-83761130 None:intergenic 20.0%
!! AGGAACTTAATATTAACAAA+AGG - chr4.3:83761091-83761110 None:intergenic 20.0%
!! ATATATCCATAACATCATTT+CGG - chr4.3:83762118-83762137 None:intergenic 20.0%
!! GGAAGAATATAAATTAAACA+AGG - chr4.3:83760087-83760106 None:intergenic 20.0%
!! TCTAAATTAATTGAATGTTG+TGG + chr4.3:83764566-83764585 MS.gene33709:intron 20.0%
!! TGAGATTTAGTACAATATTA+CGG + chr4.3:83760508-83760527 MS.gene33709:intron 20.0%
!! TGATGTTATGGATATATTAA+TGG + chr4.3:83762121-83762140 MS.gene33709:intron 20.0%
!!! AAAAGCTTTGAATATTAGTT+TGG + chr4.3:83762467-83762486 MS.gene33709:intron 20.0%
!!! AACACTTAACCATTTTATAT+CGG + chr4.3:83763520-83763539 MS.gene33709:intron 20.0%
!!! AATAAAAGAAAAAGTACAAG+AGG - chr4.3:83762360-83762379 None:intergenic 20.0%
!!! ACAATTCATATGTTTTTGAA+CGG - chr4.3:83760794-83760813 None:intergenic 20.0%
!!! ACATAGCTTTTTTCTTTATT+GGG + chr4.3:83762087-83762106 MS.gene33709:intron 20.0%
!!! ATAATACTAGTTTGTACAAA+AGG - chr4.3:83763784-83763803 None:intergenic 20.0%
!!! ATTTTGAAAAATTTCACTGA+AGG - chr4.3:83762956-83762975 None:intergenic 20.0%
!!! CATCTAAAACTTAAATGAAT+TGG + chr4.3:83763048-83763067 MS.gene33709:intron 20.0%
!!! GAAAAGTATAATTGTATATG+TGG - chr4.3:83761369-83761388 None:intergenic 20.0%
!!! GTTATTGTATCTAATTTTGA+AGG - chr4.3:83760062-83760081 None:intergenic 20.0%
!!! TTTATAAAGCACTAAAACAT+TGG - chr4.3:83763134-83763153 None:intergenic 20.0%
! AAAATGTAAGAAGAGAACTT+AGG - chr4.3:83763838-83763857 None:intergenic 25.0%
! AAATGATTATGTTATGAGGA+AGG + chr4.3:83764979-83764998 MS.gene33709:intron 25.0%
! AACATGATCTTCACAAATTA+TGG + chr4.3:83760727-83760746 MS.gene33709:intron 25.0%
! AAGATCATTAGTTAATGAGT+TGG + chr4.3:83760483-83760502 MS.gene33709:intron 25.0%
! AAGTTGAAAATAAGCTATGA+TGG + chr4.3:83762029-83762048 MS.gene33709:intron 25.0%
! AATTGTCTTATGTGAAACTA+TGG + chr4.3:83760808-83760827 MS.gene33709:intron 25.0%
! AATTTATCATGAGACCTTTA+TGG - chr4.3:83764018-83764037 None:intergenic 25.0%
! AATTTGGATAATTATCACCA+GGG - chr4.3:83765121-83765140 None:intergenic 25.0%
! AGAGATAAGCAAATAATTAG+AGG + chr4.3:83761754-83761773 MS.gene33709:intron 25.0%
! AGATAAGCAAATAATTAGAG+GGG + chr4.3:83761756-83761775 MS.gene33709:intron 25.0%
! AGTTAACCAAGTATACATAA+TGG + chr4.3:83761783-83761802 MS.gene33709:intron 25.0%
! ATATCGTAAAAACATTGCAA+AGG + chr4.3:83763338-83763357 MS.gene33709:intron 25.0%
! ATCTTTCAAGAAATTTGAGA+TGG + chr4.3:83762711-83762730 MS.gene33709:intron 25.0%
! ATTTGAGAAAAAATTTCGCT+TGG - chr4.3:83761869-83761888 None:intergenic 25.0%
! CAATGGAAACTAAATTTCTT+TGG - chr4.3:83762784-83762803 None:intergenic 25.0%
! CTAAATATAACTCGTTTGAT+CGG - chr4.3:83763294-83763313 None:intergenic 25.0%
! CTAACAAGGTAAAAAACAAT+TGG + chr4.3:83764215-83764234 MS.gene33709:intron 25.0%
! GAGATAAGCAAATAATTAGA+GGG + chr4.3:83761755-83761774 MS.gene33709:intron 25.0%
! TAAAGAAAAAAGCTATGTCA+AGG - chr4.3:83762085-83762104 None:intergenic 25.0%
! TAAAGTGAAATATACAGACT+TGG + chr4.3:83760911-83760930 MS.gene33709:intron 25.0%
! TAAATATAACTCGTTTGATC+GGG - chr4.3:83763293-83763312 None:intergenic 25.0%
! TAATAAGTGTAGTAAAGATG+AGG + chr4.3:83760253-83760272 MS.gene33709:intron 25.0%
! TACGATATATATTGTGAACA+TGG + chr4.3:83760669-83760688 MS.gene33709:intron 25.0%
! TAGAACATCATTTGAAAATG+AGG - chr4.3:83761620-83761639 None:intergenic 25.0%
! TATAATTGTATATGTGGATG+TGG - chr4.3:83761363-83761382 None:intergenic 25.0%
! TATGGATATATTAATGGTTG+TGG + chr4.3:83762127-83762146 MS.gene33709:intron 25.0%
! TATTTGTCAGAACAAAATGT+AGG + chr4.3:83762332-83762351 MS.gene33709:intron 25.0%
! TCTAATTATTTGCTTATCTC+TGG - chr4.3:83761755-83761774 None:intergenic 25.0%
! TTTAAGTGCAAAGAATTCTA+AGG + chr4.3:83764496-83764515 MS.gene33709:intron 25.0%
! TTTGTTTATGAATAAGCTAC+TGG + chr4.3:83761291-83761310 MS.gene33709:intron 25.0%
!! AAAACTCAAAGGTATGTAAA+TGG - chr4.3:83761066-83761085 None:intergenic 25.0%
!! AAAAGTTTAGGATGACAAAT+AGG - chr4.3:83763420-83763439 None:intergenic 25.0%
!! AAATCAGTTTTCCTATGAAA+AGG + chr4.3:83763155-83763174 MS.gene33709:CDS 25.0%
!! ACAGCAATATCAAATTTTTG+TGG + chr4.3:83762813-83762832 MS.gene33709:intron 25.0%
!! ACCTGTAGATTTTGTAATAA+GGG + chr4.3:83760382-83760401 MS.gene33709:intron 25.0%
!! ACTATTTTACTTACCACTAA+AGG + chr4.3:83763567-83763586 MS.gene33709:intron 25.0%
!! ATGAAACCAAACAATTTTAC+TGG - chr4.3:83762513-83762532 None:intergenic 25.0%
!! CAAGTATACATAATGGAAAA+TGG + chr4.3:83761790-83761809 MS.gene33709:intron 25.0%
!! CAATATCAAATTTTTGTGGA+AGG + chr4.3:83762817-83762836 MS.gene33709:intron 25.0%
!! CATTTTCCATTATGTATACT+TGG - chr4.3:83761792-83761811 None:intergenic 25.0%
!! TACCTGTAGATTTTGTAATA+AGG + chr4.3:83760381-83760400 MS.gene33709:intron 25.0%
!! TGAAAACTTTTGTACATACT+AGG - chr4.3:83760108-83760127 None:intergenic 25.0%
!! TGAATCAACATGAAATTTTC+AGG + chr4.3:83763261-83763280 MS.gene33709:intron 25.0%
!! TTTTAATAGGAATGAAAGTG+AGG + chr4.3:83761477-83761496 MS.gene33709:intron 25.0%
!! TTTTACCTTGTTAGTGAAAA+GGG - chr4.3:83764209-83764228 None:intergenic 25.0%
!! TTTTATCATCAACAGTTACA+AGG - chr4.3:83762195-83762214 None:intergenic 25.0%
!! TTTTTACCTTGTTAGTGAAA+AGG - chr4.3:83764210-83764229 None:intergenic 25.0%
!!! AAGTTTTATCTCACTAAGTA+GGG - chr4.3:83760557-83760576 None:intergenic 25.0%
!!! AAGTTTTCATTTTTGTGTCA+AGG + chr4.3:83760119-83760138 MS.gene33709:intron 25.0%
!!! AGTATTAGCTTTTCAAGATT+AGG - chr4.3:83763947-83763966 None:intergenic 25.0%
!!! CAATTCATATGTTTTTGAAC+GGG - chr4.3:83760793-83760812 None:intergenic 25.0%
!!! GACATAGCTTTTTTCTTTAT+TGG + chr4.3:83762086-83762105 MS.gene33709:intron 25.0%
!!! TAGTACAATGACTTTTTTGT+TGG - chr4.3:83760937-83760956 None:intergenic 25.0%
AAAGACTAAGAACCTTTCTA+AGG - chr4.3:83764424-83764443 None:intergenic 30.0%
AACAAAAGGTCAAAACTCAA+AGG - chr4.3:83761077-83761096 None:intergenic 30.0%
AACTTAAATGAATTGGGAGA+TGG + chr4.3:83763055-83763074 MS.gene33709:intron 30.0%
AAGTATTTCCTTCGATCATT+CGG + chr4.3:83764276-83764295 MS.gene33709:intron 30.0%
ACTTAAATGAATTGGGAGAT+GGG + chr4.3:83763056-83763075 MS.gene33709:intron 30.0%
AGAAGAACCTTCATAATTGA+AGG - chr4.3:83765150-83765169 None:intergenic 30.0%
AGTTCTATCATATTGTGTGT+CGG + chr4.3:83760956-83760975 MS.gene33709:intron 30.0%
ATGTCACATATTAAGCAAAC+AGG - chr4.3:83761188-83761207 None:intergenic 30.0%
ATTGGATATATTTCCTTGTG+TGG + chr4.3:83764233-83764252 MS.gene33709:intron 30.0%
CAAATGATGTTCTACTACTA+GGG + chr4.3:83761626-83761645 MS.gene33709:CDS 30.0%
CAATTATGACTAACCTTTAG+TGG - chr4.3:83763583-83763602 None:intergenic 30.0%
CAATTTGGATAATTATCACC+AGG - chr4.3:83765122-83765141 None:intergenic 30.0%
CATACATGGATCATTACATT+CGG + chr4.3:83763459-83763478 MS.gene33709:intron 30.0%
CATTTAGTACATTGACAACA+TGG - chr4.3:83761255-83761274 None:intergenic 30.0%
CTACTTAGTGAGATAAAACT+TGG + chr4.3:83760556-83760575 MS.gene33709:intron 30.0%
GTAAAAACATTGCAAAGGAA+AGG + chr4.3:83763343-83763362 MS.gene33709:intron 30.0%
GTATGAAATGGTCATGATAA+TGG + chr4.3:83763177-83763196 MS.gene33709:intron 30.0%
TAACAAATATATCGACAGCT+TGG - chr4.3:83764657-83764676 None:intergenic 30.0%
TAATACTCAAAGATTGTCCA+AGG + chr4.3:83763960-83763979 MS.gene33709:intron 30.0%
TAGGCATGTTTGAAAAATCT+GGG - chr4.3:83763928-83763947 None:intergenic 30.0%
TCAAATGATGTTCTACTACT+AGG + chr4.3:83761625-83761644 MS.gene33709:CDS 30.0%
TCTTACTAATTAGCATCAAG+TGG + chr4.3:83760144-83760163 MS.gene33709:intron 30.0%
TGATAGACAGGTAACAAAAT+GGG + chr4.3:83761958-83761977 MS.gene33709:intron 30.0%
TGTCACATATTAAGCAAACA+GGG - chr4.3:83761187-83761206 None:intergenic 30.0%
TTAAATGATGATATCGAGAG+AGG + chr4.3:83762053-83762072 MS.gene33709:intron 30.0%
TTAGGCATGTTTGAAAAATC+TGG - chr4.3:83763929-83763948 None:intergenic 30.0%
TTATAGTTCCTCAAGTGAAA+GGG + chr4.3:83765177-83765196 MS.gene33709:intron 30.0%
TTGATAGACAGGTAACAAAA+TGG + chr4.3:83761957-83761976 MS.gene33709:intron 30.0%
TTGCTATCTATTCAACCAAA+TGG + chr4.3:83760704-83760723 MS.gene33709:intron 30.0%
TTTATAGTTCCTCAAGTGAA+AGG + chr4.3:83765176-83765195 MS.gene33709:intron 30.0%
TTTCTTTGGTAAAAATCTGC+AGG - chr4.3:83762770-83762789 None:intergenic 30.0%
! AAAAATTTCACTGAAGGTAC+TGG - chr4.3:83762950-83762969 None:intergenic 30.0%
! AAGCTTTTTGATAAACTTGC+TGG - chr4.3:83760767-83760786 None:intergenic 30.0%
! ACCATTTCATACCTTTTCAT+AGG - chr4.3:83763169-83763188 None:intergenic 30.0%
! CACTTAAAGTCTTATAGTTC+TGG + chr4.3:83764730-83764749 MS.gene33709:intron 30.0%
! CCTGTAGATTTTGTAATAAG+GGG + chr4.3:83760383-83760402 MS.gene33709:intron 30.0%
! TAATTGAAGGCTAGTCAATT+TGG - chr4.3:83765137-83765156 None:intergenic 30.0%
! TCCTATGAAAAGGTATGAAA+TGG + chr4.3:83763165-83763184 MS.gene33709:intron 30.0%
! TGCAAAGAATTCTAAGGAAT+TGG + chr4.3:83764502-83764521 MS.gene33709:intron 30.0%
! TTACATTTTTGTTCTTGCAG+AGG + chr4.3:83763849-83763868 MS.gene33709:intron 30.0%
! TTCTTTTGCACTTGATCATT+GGG - chr4.3:83762011-83762030 None:intergenic 30.0%
!! AAGAGTATTTATGCAGAACT+AGG - chr4.3:83761144-83761163 None:intergenic 30.0%
!! AGCTTTTTGATAAACTTGCT+GGG - chr4.3:83760766-83760785 None:intergenic 30.0%
!! CAAGTTTTATCTCACTAAGT+AGG - chr4.3:83760558-83760577 None:intergenic 30.0%
!! TAGAAAGGTTCTTAGTCTTT+TGG + chr4.3:83764424-83764443 MS.gene33709:intron 30.0%
!!! ACAATAGTTGAAGTTTTGAG+TGG - chr4.3:83760182-83760201 None:intergenic 30.0%
!!! AGCTTTTTTCTTTATTGGGA+TGG + chr4.3:83762091-83762110 MS.gene33709:intron 30.0%
!!! TCGAGATTGTTGTTGTTTTT+GGG + chr4.3:83765387-83765406 MS.gene33709:intron 30.0%
AAATCCTTTATAGCCACACA+AGG - chr4.3:83764249-83764268 None:intergenic 35.0%
AAGACGATTAGCAGAAATCA+TGG + chr4.3:83763720-83763739 MS.gene33709:intron 35.0%
ACAATACTCGACAACATTTC+TGG - chr4.3:83761894-83761913 None:intergenic 35.0%
ACCTATCGTAGAAAAGATAG+TGG + chr4.3:83760323-83760342 MS.gene33709:intron 35.0%
AGACGATTAGCAGAAATCAT+GGG + chr4.3:83763721-83763740 MS.gene33709:intron 35.0%
AGGCATGTTTGAAAAATCTG+GGG - chr4.3:83763927-83763946 None:intergenic 35.0%
AGGTCTCTTCTAATTCGAAT+GGG + chr4.3:83764622-83764641 MS.gene33709:intron 35.0%
ATTCTGTAAACCGTGAAAGT+AGG - chr4.3:83765066-83765085 None:intergenic 35.0%
ATTTCCTTGTGTGGCTATAA+AGG + chr4.3:83764242-83764261 MS.gene33709:intron 35.0%
CAACAAAAAAAAAGAGCTGC+AGG + chr4.3:83760209-83760228 MS.gene33709:intron 35.0%
CAGAAACTAAAAAATCCCTG+AGG + chr4.3:83764602-83764621 MS.gene33709:intron 35.0%
CAGAGATTTCAACGTATACA+TGG - chr4.3:83764077-83764096 None:intergenic 35.0%
CATATCCTAAGTGTTTCACA+GGG + chr4.3:83762554-83762573 MS.gene33709:intron 35.0%
CCAAAAACTTGCAAAGAATC+AGG - chr4.3:83761326-83761345 None:intergenic 35.0%
CCCCTTATTACAAAATCTAC+AGG - chr4.3:83760386-83760405 None:intergenic 35.0%
CTCATATATGATGAACCAGT+TGG + chr4.3:83765443-83765462 MS.gene33709:CDS 35.0%
CTCATTAGAATGCTCATACA+TGG + chr4.3:83763445-83763464 MS.gene33709:intron 35.0%
CTTCATGTTCTCAAATGCTT+TGG - chr4.3:83762639-83762658 None:intergenic 35.0%
CTTCATTTCTTTGGGTACTA+CGG + chr4.3:83764853-83764872 MS.gene33709:intron 35.0%
GAATAGATAGCAAGTCATCA+TGG - chr4.3:83760697-83760716 None:intergenic 35.0%
GAATGAAAGTGAGGATATCA+AGG + chr4.3:83761486-83761505 MS.gene33709:CDS 35.0%
GCACTAAAACATTGGATAAG+AGG - chr4.3:83763126-83763145 None:intergenic 35.0%
GCAGATAACATAACATCAGA+TGG + chr4.3:83765242-83765261 MS.gene33709:intron 35.0%
GCTAGATATGATTCAACTAC+TGG + chr4.3:83761591-83761610 MS.gene33709:CDS 35.0%
GTGCTTCCAGTAAAATTGTT+TGG + chr4.3:83762504-83762523 MS.gene33709:intron 35.0%
TAACAAATTGGAAGAGGACT+TGG + chr4.3:83764127-83764146 MS.gene33709:intron 35.0%
TACCTGTCTATCAAACAAGT+AGG - chr4.3:83761951-83761970 None:intergenic 35.0%
TAGTACCCAAAGAAATGAAG+TGG - chr4.3:83764853-83764872 None:intergenic 35.0%
TCATATCCTAAGTGTTTCAC+AGG + chr4.3:83762553-83762572 MS.gene33709:intron 35.0%
TCTGCAGGAATGAATGTTAA+AGG - chr4.3:83762755-83762774 None:intergenic 35.0%
TGTAAGAAGAGAACTTAGGT+AGG - chr4.3:83763834-83763853 None:intergenic 35.0%
TGTGAAACACTTAGGATATG+AGG - chr4.3:83762554-83762573 None:intergenic 35.0%
TGTGAAGATCATGTTCCATT+TGG - chr4.3:83760722-83760741 None:intergenic 35.0%
TTCAACGTATACATGGTTCT+TGG - chr4.3:83764070-83764089 None:intergenic 35.0%
TTGACAACATGGCAAGAAAT+CGG - chr4.3:83761244-83761263 None:intergenic 35.0%
TTTATCTCACTAAGTAGGGT+CGG - chr4.3:83760553-83760572 None:intergenic 35.0%
! AAATGTTGTCGAGTATTGTG+GGG + chr4.3:83761895-83761914 MS.gene33709:intron 35.0%
! AACAAAATGGGAGTGTGTAT+TGG + chr4.3:83761970-83761989 MS.gene33709:intron 35.0%
! ACAATAAAGTTGGTCGCAAA+TGG + chr4.3:83761698-83761717 MS.gene33709:intron 35.0%
! ACTTTCACGAGATGCAATTT+TGG + chr4.3:83764469-83764488 MS.gene33709:intron 35.0%
! AGAAATGTTGTCGAGTATTG+TGG + chr4.3:83761893-83761912 MS.gene33709:intron 35.0%
! AGATGGACTCAAAAATGTGT+TGG + chr4.3:83765259-83765278 MS.gene33709:intron 35.0%
! CAATTTTGAGCCTACTTTCA+CGG + chr4.3:83765053-83765072 MS.gene33709:intron 35.0%
! CATTGTATCGTGTGTTTTGT+GGG - chr4.3:83763652-83763671 None:intergenic 35.0%
! CCTGATTCTTTGCAAGTTTT+TGG + chr4.3:83761323-83761342 MS.gene33709:intron 35.0%
! CTCTGAGAACTCTTATTCTA+TGG + chr4.3:83764092-83764111 MS.gene33709:intron 35.0%
! CTTCTTTTGCACTTGATCAT+TGG - chr4.3:83762012-83762031 None:intergenic 35.0%
! GAAATGTTGTCGAGTATTGT+GGG + chr4.3:83761894-83761913 MS.gene33709:intron 35.0%
! GTTTCTTTGGTGATTTCTCA+CGG - chr4.3:83762267-83762286 None:intergenic 35.0%
! TATAGGTTTTCCTCTGTGTT+TGG - chr4.3:83760438-83760457 None:intergenic 35.0%
! TCCACTATCTTTTCTACGAT+AGG - chr4.3:83760327-83760346 None:intergenic 35.0%
! TGGTTGTTGTTGCAAACAAA+TGG + chr4.3:83760576-83760595 MS.gene33709:intron 35.0%
! TGTGGTCTTTTTGCAGAAAT+CGG + chr4.3:83762145-83762164 MS.gene33709:intron 35.0%
!! AGTCTCTTGAGCTTTTTAGT+TGG + chr4.3:83761822-83761841 MS.gene33709:intron 35.0%
!! CATGATTTGCTACGAGATAT+GGG + chr4.3:83762229-83762248 MS.gene33709:intron 35.0%
!! GCAAACTTGCCATTTACTTT+TGG + chr4.3:83761393-83761412 MS.gene33709:intron 35.0%
!! TGACTAGCCTTCAATTATGA+AGG + chr4.3:83765140-83765159 MS.gene33709:intron 35.0%
!!! ATTGCTGTTTTCTAGCTCAA+TGG - chr4.3:83762801-83762820 None:intergenic 35.0%
!!! GTCGAGATTGTTGTTGTTTT+TGG + chr4.3:83765386-83765405 MS.gene33709:intron 35.0%
!!! TAATTTTGAAGGGAGTACCT+GGG - chr4.3:83760051-83760070 None:intergenic 35.0%
AAAATGAATGTCCTGCCAAG+AGG + chr4.3:83765525-83765544 MS.gene33709:CDS 40.0%
AACCAGTTGGCGAAAATTTG+GGG + chr4.3:83765456-83765475 MS.gene33709:CDS 40.0%
AAGTTATGCCCTTTCACTTG+AGG - chr4.3:83765188-83765207 None:intergenic 40.0%
AATACGACTGTCAAGTCATG+TGG + chr4.3:83765083-83765102 MS.gene33709:intron 40.0%
ACGTATACATGGTTCTTGGA+AGG - chr4.3:83764066-83764085 None:intergenic 40.0%
ACTGGACCACTTCATTTCTT+TGG + chr4.3:83764844-83764863 MS.gene33709:intron 40.0%
AGAGAGTAGTATATGGAACC+TGG + chr4.3:83765356-83765375 MS.gene33709:intron 40.0%
AGTCAAATCACCAAACACAG+AGG + chr4.3:83760425-83760444 MS.gene33709:intron 40.0%
AGTGTCATCTGCAATCAAAG+TGG - chr4.3:83764171-83764190 None:intergenic 40.0%
ATGTTCTACTACTAGGGATG+TGG + chr4.3:83761632-83761651 MS.gene33709:CDS 40.0%
CATTCAGCTCTATAAGAGAG+AGG + chr4.3:83765303-83765322 MS.gene33709:intron 40.0%
CCAACAAGAACATTCTCATC+TGG - chr4.3:83765494-83765513 None:intergenic 40.0%
CCAGATGAGAATGTTCTTGT+TGG + chr4.3:83765491-83765510 MS.gene33709:CDS 40.0%
CTACTACACCACAATACACT+CGG - chr4.3:83764797-83764816 None:intergenic 40.0%
CTCGGCTCTTCACATATAAT+TGG - chr4.3:83764779-83764798 None:intergenic 40.0%
CTGGACCACTTCATTTCTTT+GGG + chr4.3:83764845-83764864 MS.gene33709:intron 40.0%
CTTTCAAAACCATCCAACCA+AGG - chr4.3:83763493-83763512 None:intergenic 40.0%
GAACCAGTTGGCGAAAATTT+GGG + chr4.3:83765455-83765474 MS.gene33709:CDS 40.0%
GAGGTCTCTTCTAATTCGAA+TGG + chr4.3:83764621-83764640 MS.gene33709:intron 40.0%
GATGGACCGAAATGATGTTA+TGG + chr4.3:83762109-83762128 MS.gene33709:intron 40.0%
GCGTATGTGCCAAAAGTAAA+TGG - chr4.3:83761405-83761424 None:intergenic 40.0%
GGAAATAGATGACAGACAGT+GGG - chr4.3:83764396-83764415 None:intergenic 40.0%
GTCCTACTTGTTTGATAGAC+AGG + chr4.3:83761946-83761965 MS.gene33709:intron 40.0%
GTGTATTGTGGTGTAGTAGT+TGG + chr4.3:83764798-83764817 MS.gene33709:intron 40.0%
TAAAGATGAGGATGTTGCGT+TGG + chr4.3:83760265-83760284 MS.gene33709:intron 40.0%
TAATTAGCATCAAGTGGCCA+AGG + chr4.3:83760150-83760169 MS.gene33709:intron 40.0%
TACATGGTTCTTGGAAGGTT+AGG - chr4.3:83764061-83764080 None:intergenic 40.0%
TACATTCGGAAATGTAGCCT+TGG + chr4.3:83763473-83763492 MS.gene33709:intron 40.0%
TACTTGAAGAGTGATCCTCT+TGG - chr4.3:83765543-83765562 None:intergenic 40.0%
TAGCAGGTTATGGTTTCATG+AGG + chr4.3:83762297-83762316 MS.gene33709:intron 40.0%
TATCAAACAAGTAGGACCCA+AGG - chr4.3:83761943-83761962 None:intergenic 40.0%
TATGAAGCACGTACACTCTT+CGG - chr4.3:83761034-83761053 None:intergenic 40.0%
TATTTCCGAGGTCCTTAGAA+AGG + chr4.3:83764409-83764428 MS.gene33709:intron 40.0%
TCGAATTAGAAGAGACCTCA+GGG - chr4.3:83764620-83764639 None:intergenic 40.0%
TGAACCAGTTGGCGAAAATT+TGG + chr4.3:83765454-83765473 MS.gene33709:CDS 40.0%
TGTTCTACTACTAGGGATGT+GGG + chr4.3:83761633-83761652 MS.gene33709:CDS 40.0%
TTCGAATTAGAAGAGACCTC+AGG - chr4.3:83764621-83764640 None:intergenic 40.0%
! AAAGTTGGTCGCAAATGGTT+TGG + chr4.3:83761703-83761722 MS.gene33709:intron 40.0%
! AAGAACCTTTCTAAGGACCT+CGG - chr4.3:83764417-83764436 None:intergenic 40.0%
! AAGTGCCCTTTTCACTAACA+AGG + chr4.3:83764201-83764220 MS.gene33709:intron 40.0%
! AATGTTGTCGAGTATTGTGG+GGG + chr4.3:83761896-83761915 MS.gene33709:intron 40.0%
! ATTTTTGTGGAAGGAGATGC+AGG + chr4.3:83762826-83762845 MS.gene33709:intron 40.0%
! ATTTTTGTTCTTGCAGAGGC+TGG + chr4.3:83763853-83763872 MS.gene33709:intron 40.0%
! GAAATTTGAGATGGCTGTGT+TGG + chr4.3:83762720-83762739 MS.gene33709:intron 40.0%
! GAGAATGTTCTTGTTGGTGA+TGG + chr4.3:83765497-83765516 MS.gene33709:CDS 40.0%
! GCATTGTATCGTGTGTTTTG+TGG - chr4.3:83763653-83763672 None:intergenic 40.0%
!! AGGTACTGGCAGAATTAGAA+AGG - chr4.3:83762936-83762955 None:intergenic 40.0%
!! CTTAGTCTTTTGGTAGAGTG+CGG + chr4.3:83764434-83764453 MS.gene33709:intron 40.0%
!! GCATGATTTGCTACGAGATA+TGG + chr4.3:83762228-83762247 MS.gene33709:intron 40.0%
!!! CTAATTTTGAAGGGAGTACC+TGG - chr4.3:83760052-83760071 None:intergenic 40.0%
!!! TAGTTGAAGTTTTGAGTGGC+TGG - chr4.3:83760178-83760197 None:intergenic 40.0%
!!! TGAGGGACTAGTTTTGAAGT+TGG + chr4.3:83762589-83762608 MS.gene33709:intron 40.0%
AAATGAAGTGGTCCAGTAGC+CGG - chr4.3:83764841-83764860 None:intergenic 45.0%
AAGGGGAGTAGATCAGATGA+AGG + chr4.3:83760400-83760419 MS.gene33709:intron 45.0%
ACAATCTCGACTTTGTCACC+AGG - chr4.3:83765377-83765396 None:intergenic 45.0%
ACCACTGGACATCTCCATAA+AGG + chr4.3:83764001-83764020 MS.gene33709:intron 45.0%
ACCTTTATGGAGATGTCCAG+TGG - chr4.3:83764005-83764024 None:intergenic 45.0%
ACTCGAGATTCGACTCTAAC+TGG - chr4.3:83761571-83761590 None:intergenic 45.0%
AGGGGAGTAGATCAGATGAA+GGG + chr4.3:83760401-83760420 MS.gene33709:intron 45.0%
ATAAGAGATGACATGCCAGC+AGG - chr4.3:83764347-83764366 None:intergenic 45.0%
ATCCAAGACCGAATGATCGA+AGG - chr4.3:83764287-83764306 None:intergenic 45.0%
ATGGAGATGTCCAGTGGTAT+GGG - chr4.3:83763999-83764018 None:intergenic 45.0%
CAGTGGGAACTACTTCTTGA+TGG - chr4.3:83764380-83764399 None:intergenic 45.0%
CGGAAATAGATGACAGACAG+TGG - chr4.3:83764397-83764416 None:intergenic 45.0%
CTACGCTTCTCGAGTTTCTT+TGG - chr4.3:83762280-83762299 None:intergenic 45.0%
CTCAGATTGCTTCATCTTGC+TGG + chr4.3:83762662-83762681 MS.gene33709:intron 45.0%
CTGTCTGTCATCTATTTCCG+AGG + chr4.3:83764397-83764416 MS.gene33709:intron 45.0%
CTTGCTGGTGTACAACTTGA+TGG + chr4.3:83762677-83762696 MS.gene33709:intron 45.0%
GAGTGGCAGAGAGTAGTATA+TGG + chr4.3:83765349-83765368 MS.gene33709:intron 45.0%
GATCACTCTTCAAGTAGAGC+TGG + chr4.3:83765547-83765566 MS.gene33709:CDS 45.0%
GGAAGAGGACTTGGAACAAA+TGG + chr4.3:83764136-83764155 MS.gene33709:intron 45.0%
GTTCTACTACTAGGGATGTG+GGG + chr4.3:83761634-83761653 MS.gene33709:CDS 45.0%
TATGGAGATGTCCAGTGGTA+TGG - chr4.3:83764000-83764019 None:intergenic 45.0%
TGGTTCTTGGAAGGTTAGGA+AGG - chr4.3:83764057-83764076 None:intergenic 45.0%
TTACAAGGCTTCGCTCAACA+AGG - chr4.3:83762180-83762199 None:intergenic 45.0%
TTCCTTCGATCATTCGGTCT+TGG + chr4.3:83764282-83764301 MS.gene33709:intron 45.0%
TTGAGATGGCTGTGTTGGAA+CGG + chr4.3:83762725-83762744 MS.gene33709:intron 45.0%
! AGACTCGACTAAGGTGGTTT+TGG + chr4.3:83760346-83760365 MS.gene33709:intron 45.0%
! CCACCTTTGAAAATGAGGAG+TGG + chr4.3:83765332-83765351 MS.gene33709:intron 45.0%
! CCACTCCTCATTTTCAAAGG+TGG - chr4.3:83765335-83765354 None:intergenic 45.0%
! CTGCCACTCCTCATTTTCAA+AGG - chr4.3:83765338-83765357 None:intergenic 45.0%
! GAAATGTAGCCTTGGTTGGA+TGG + chr4.3:83763481-83763500 MS.gene33709:intron 45.0%
! GTTCGCCACCTTTGAAAATG+AGG + chr4.3:83765327-83765346 MS.gene33709:intron 45.0%
! TTCGGAAATGTAGCCTTGGT+TGG + chr4.3:83763477-83763496 MS.gene33709:intron 45.0%
!! AGATAGTGGAGACTCGACTA+AGG + chr4.3:83760337-83760356 MS.gene33709:intron 45.0%
!! GTCGCAAATGGTTTGGTTCA+GGG + chr4.3:83761710-83761729 MS.gene33709:intron 45.0%
!!! TTTTTTATTTTAAAATTTAG+TGG - chr4.3:83763020-83763039 None:intergenic 5.0%
AACGACTCTGCTGCAATGGA+TGG - chr4.3:83764889-83764908 None:intergenic 50.0%
AATGAAGTGGTCCAGTAGCC+GGG - chr4.3:83764840-83764859 None:intergenic 50.0%
ACGACTGTCAAGTCATGTGG+TGG + chr4.3:83765086-83765105 MS.gene33709:intron 50.0%
ACTACTAGGGATGTGGGGTA+TGG + chr4.3:83761639-83761658 MS.gene33709:intron 50.0%
AGATTGTCCAAGGCTGTCTG+AGG + chr4.3:83763970-83763989 MS.gene33709:intron 50.0%
AGGATGTTGCGTTGGATGTG+TGG + chr4.3:83760273-83760292 MS.gene33709:intron 50.0%
CATTGCAGCAGAGTCGTTTC+AGG + chr4.3:83764891-83764910 MS.gene33709:intron 50.0%
CTACTAGGGATGTGGGGTAT+GGG + chr4.3:83761640-83761659 MS.gene33709:intron 50.0%
CTGAAACGACTCTGCTGCAA+TGG - chr4.3:83764893-83764912 None:intergenic 50.0%
GATTAGGTGTGTCCTGGTGT+CGG - chr4.3:83761012-83761031 None:intergenic 50.0%
GCACGTACACTCTTCGGATT+AGG - chr4.3:83761028-83761047 None:intergenic 50.0%
GTACGTGCTTCATAGCTCGT+TGG + chr4.3:83761040-83761059 MS.gene33709:intron 50.0%
GTGAAGAGCCGAGTGTATTG+TGG + chr4.3:83764786-83764805 MS.gene33709:intron 50.0%
GTGCACCCTGTGAAACACTT+AGG - chr4.3:83762562-83762581 None:intergenic 50.0%
TAGTGGAGACTCGACTAAGG+TGG + chr4.3:83760340-83760359 MS.gene33709:intron 50.0%
TGAAGAGTGATCCTCTTGGC+AGG - chr4.3:83765539-83765558 None:intergenic 50.0%
! AGAAACTCGAGAAGCGTAGC+AGG + chr4.3:83762281-83762300 MS.gene33709:intron 50.0%
! TCGAGAAGCGTAGCAGGTTA+TGG + chr4.3:83762287-83762306 MS.gene33709:intron 50.0%
! TCTGAGGTTTCCCATACCAC+TGG + chr4.3:83763986-83764005 MS.gene33709:intron 50.0%
! TCTTCGGATTAGGTGTGTCC+TGG - chr4.3:83761018-83761037 None:intergenic 50.0%
! TGCCCCAAATTTTCGCCAAC+TGG - chr4.3:83765461-83765480 None:intergenic 50.0%
!! ATTGTGTGTCGGTGTCGTGT+CGG + chr4.3:83760967-83760986 MS.gene33709:intron 50.0%
!! GGTCGCAAATGGTTTGGTTC+AGG + chr4.3:83761709-83761728 MS.gene33709:intron 50.0%
!! GTTTTGAGTGGCTGGATCCT+TGG - chr4.3:83760170-83760189 None:intergenic 50.0%
ACAGGGTGCACAAGCTGTTG+AGG + chr4.3:83762571-83762590 MS.gene33709:intron 55.0%
AGCAGAGTCGTTTCAGGAGG+GGG + chr4.3:83764897-83764916 MS.gene33709:intron 55.0%
CAGCAGAGTCGTTTCAGGAG+GGG + chr4.3:83764896-83764915 MS.gene33709:intron 55.0%
CAGGGTGCACAAGCTGTTGA+GGG + chr4.3:83762572-83762591 MS.gene33709:intron 55.0%
CTGCTGCAATGGATGGCAGA+GGG - chr4.3:83764882-83764901 None:intergenic 55.0%
GCAGCAGAGTCGTTTCAGGA+GGG + chr4.3:83764895-83764914 MS.gene33709:intron 55.0%
TCTGCTGCAATGGATGGCAG+AGG - chr4.3:83764883-83764902 None:intergenic 55.0%
TGCAGCAGAGTCGTTTCAGG+AGG + chr4.3:83764894-83764913 MS.gene33709:intron 55.0%
TGCTGCAATGGATGGCAGAG+GGG - chr4.3:83764881-83764900 None:intergenic 55.0%
TGGGAAACCTCAGACAGCCT+TGG - chr4.3:83763980-83763999 None:intergenic 55.0%
! ATGTGGGGTATGGGAGGCAT+TGG + chr4.3:83761649-83761668 MS.gene33709:intron 55.0%
AAGTGGTCCAGTAGCCGGGA+AGG - chr4.3:83764836-83764855 None:intergenic 60.0%
AGTGGTCCAGTAGCCGGGAA+GGG - chr4.3:83764835-83764854 None:intergenic 60.0%
CAGAGTCGTTTCAGGAGGGG+GGG + chr4.3:83764899-83764918 MS.gene33709:intron 60.0%
CCAAGGACTTCCAGAGCCAG+CGG - chr4.3:83761926-83761945 None:intergenic 60.0%
CTAGGGATGTGGGGTATGGG+AGG + chr4.3:83761643-83761662 MS.gene33709:intron 60.0%
GCAGAGTCGTTTCAGGAGGG+GGG + chr4.3:83764898-83764917 MS.gene33709:intron 60.0%
GCTGCAATGGATGGCAGAGG+GGG - chr4.3:83764880-83764899 None:intergenic 60.0%
GGCACTTCTAGTCCCCTTCC+CGG + chr4.3:83764819-83764838 MS.gene33709:intron 60.0%
TGTGGTGGTTTCTCGCTCCC+TGG + chr4.3:83765101-83765120 MS.gene33709:intron 60.0%
! TCCTGGTGTCGGACAGGTGT+CGG - chr4.3:83761001-83761020 None:intergenic 60.0%
!! CGCTGGCTCTGGAAGTCCTT+GGG + chr4.3:83761924-83761943 MS.gene33709:intron 60.0%
!! GTGTCGGTGTCGTGTCGGTT+CGG + chr4.3:83760972-83760991 MS.gene33709:intron 60.0%
ACCGACACCTGTCCGACACC+AGG + chr4.3:83760997-83761016 MS.gene33709:intron 65.0%
CTAGTCCCCTTCCCGGCTAC+TGG + chr4.3:83764826-83764845 MS.gene33709:intron 65.0%
GTATTGTGGGGGACTGCCGC+TGG + chr4.3:83761907-83761926 MS.gene33709:intron 65.0%
GTGGTCCAGTAGCCGGGAAG+GGG - chr4.3:83764834-83764853 None:intergenic 65.0%
! GGTGTGTCCTGGTGTCGGAC+AGG - chr4.3:83761007-83761026 None:intergenic 65.0%
!! CCGCTGGCTCTGGAAGTCCT+TGG + chr4.3:83761923-83761942 MS.gene33709:intron 65.0%
!! TGGGGGACTGCCGCTGGCTC+TGG + chr4.3:83761913-83761932 MS.gene33709:intron 75.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 83760039 83765613 83760039 ID=MS.gene33709
chr4.3 mRNA 83760039 83765613 83760039 ID=MS.gene33709.t1;Parent=MS.gene33709
chr4.3 exon 83760039 83760052 83760039 ID=MS.gene33709.t1.exon1;Parent=MS.gene33709.t1
chr4.3 CDS 83760039 83760052 83760039 ID=cds.MS.gene33709.t1;Parent=MS.gene33709.t1
chr4.3 exon 83761486 83761655 83761486 ID=MS.gene33709.t1.exon2;Parent=MS.gene33709.t1
chr4.3 CDS 83761486 83761655 83761486 ID=cds.MS.gene33709.t1;Parent=MS.gene33709.t1
chr4.3 exon 83763143 83763176 83763143 ID=MS.gene33709.t1.exon3;Parent=MS.gene33709.t1
chr4.3 CDS 83763143 83763176 83763143 ID=cds.MS.gene33709.t1;Parent=MS.gene33709.t1
chr4.3 exon 83765415 83765613 83765415 ID=MS.gene33709.t1.exon4;Parent=MS.gene33709.t1
chr4.3 CDS 83765415 83765613 83765415 ID=cds.MS.gene33709.t1;Parent=MS.gene33709.t1
Gene Sequence

>MS.gene33709

ATGTCAAATCCCAGGTACTCCCTTCAAAATTAGATACAATAACAACCTTGTTTAATTTATATTCTTCCTAGTATGTACAAAAGTTTTCATTTTTGTGTCAAGGAATCTTACTAATTAGCATCAAGTGGCCAAGGATCCAGCCACTCAAAACTTCAACTATTGTTAGTATTCAACAAAAAAAAAGAGCTGCAGGTAGTAATAGAAGCTAATGTTATAATAAGTGTAGTAAAGATGAGGATGTTGCGTTGGATGTGTGGTAAGACTAGACAAAATATGATCATAACACCTATCGTAGAAAAGATAGTGGAGACTCGACTAAGGTGGTTTTGGCATGTAGAAAAATACCTGTAGATTTTGTAATAAGGGGAGTAGATCAGATGAAGGGTAGTCAAATCACCAAACACAGAGGAAAACCTATAAAAACTTTAAAAGAAACTATTAACAAAGATCATTAGTTAATGAGTTGGATTGAGATTTAGTACAATATTACGGCGTTGTTTGATCTATGTAGCCGACCCTACTTAGTGAGATAAAACTTGGTTGTTGTTGCAAACAAATGGATGAACTTTATTGTGAAAAAAGTAAACAATTAAAAGAAAATGGGAAAAACACACACATAGAGTTATCTAATACGATATATATTGTGAACATGGTTCCATGATGACTTGCTATCTATTCAACCAAATGGAACATGATCTTCACAAATTATGGATATGTGAGCTTACCCAGCAAGTTTATCAAAAAGCTTAATCCCGTTCAAAAACATATGAATTGTCTTATGTGAAACTATGGCAATATATAACAATAAGAGACCAACAAATAAAAAAATCAAAAGTTTCAATATACAATGAAGTAACAGAATGTCATTAAACTAAAGTGAAATATACAGACTTGGCCAACAAAAAAGTCATTGTACTAGTTCTATCATATTGTGTGTCGGTGTCGTGTCGGTTCGGACACCGACACCTGTCCGACACCAGGACACACCTAATCCGAAGAGTGTACGTGCTTCATAGCTCGTTGGCCATTTACATACCTTTGAGTTTTGACCTTTTGTTAATATTAAGTTCCTTTGTATTTTCTTTCTTTTCTTCTAAAGTGTCCTAGTTCTGCATAAATACTCTTGTGCGTGTGAAAGAATCATTCCCTGTTTGCTTAATATGTGACATATAGTTGACATCTTAAGCTTTTATTTTAAATCTCCGATTTCTTGCCATGTTGTCAATGTACTAAATGATAATTGCACCTATAATTTGTTTATGAATAAGCTACTGGACAACACTTCCTGATTCTTTGCAAGTTTTTGGAAACAATTCAACTTCCACATCCACATATACAATTATACTTTTCTTACGCAAACTTGCCATTTACTTTTGGCACATACGCAAACTTAAATATGCATAATAAATAAATATGCATTTTTCATTGGTTTATTTTTTTTTAATAGGAATGAAAGTGAGGATATCAAGGATATTGTTGAAAAAGTTACACATTTGCTTGACAAGACAGACTTGTTCATTGCTGATCATCCAGTTAGAGTCGAATCTCGAGTGCTAGATATGATTCAACTACTGGACACCTCATTTTCAAATGATGTTCTACTACTAGGGATGTGGGGTATGGGAGGCATTGGTAAAACAACTATTGCAAAATTTGTTTACAATAAAGTTGGTCGCAAATGGTTTGGTTCAGGGAGTAGAATAATCATCACAACCAGAGATAAGCAAATAATTAGAGGGGATAGAGTTAACCAAGTATACATAATGGAAAATGGATGAAAGTGAGTCTCTTGAGCTTTTTAGTTGGCATGCATTCAAGAAAGTGAGTCCAAGCGAAATTTTTTCTCAAATTTCCAGAAATGTTGTCGAGTATTGTGGGGGACTGCCGCTGGCTCTGGAAGTCCTTGGGTCCTACTTGTTTGATAGACAGGTAACAAAATGGGAGTGTGTATTGGAGAAACTCGAGAATTCCCAATGATCAAGTGCAAAAGAAGTTGAAAATAAGCTATGATGGCTTAAATGATGATATCGAGAGAGGCATATTCCTTGACATAGCTTTTTTCTTTATTGGGATGGACCGAAATGATGTTATGGATATATTAATGGTTGTGGTCTTTTTGCAGAAATCGGAATAAGTGTCCTTGTTGAGCGAAGCCTTGTAACTGTTGATGATAAAAACAAGCTTGAAATGCATGATTTGCTACGAGATATGGGAAGAGAGATCATCCGTGAGAAATCACCAAAGAAACTCGAGAAGCGTAGCAGGTTATGGTTTCATGAGGATGTTCATGATGTATTTGTCAGAACAAAATGTAGGAACCTCTTGTACTTTTTCTTTTATTCTAGATTTAAAACATCTAAAGCTTAAAGATGCAAAACAAACATATATGAACTAGCTGTCAACATTCATCTATTCTGTTGATTATCACAAAAGCTTTGAATATTAGTTTGGATGTTAATCGTTTTGTGCTTCCAGTAAAATTGTTTGGTTTCATCGCAAGTTTTTTTTTCTGCCTCATATCCTAAGTGTTTCACAGGGTGCACAAGCTGTTGAGGGACTAGTTTTGAAGTTGGCAGCTAATGCAAAATGTTTTAGTACCAAAGCATTTGAGAACATGAAGAAACTCAGATTGCTTCATCTTGCTGGTGTACAACTTGATGGAGATTTTAAATATCTTTCAAGAAATTTGAGATGGCTGTGTTGGAACGGATTTCCTTTAACATTCATTCCTGCAGATTTTTACCAAAGAAATTTAGTTTCCATTGAGCTAGAAAACAGCAATATCAAATTTTTGTGGAAGGAGATGCAGGTATTAATTTTTAGTTAAATTTTTGCATTTTATGAATTGTTTTCAGTTTTCATTTTTATGTAGACAGTTTTCATCTGTTTCTCAACCTTTCTAATTCTGCCAGTACCTTCAGTGAAATTTTTCAAAATGTCTAAATTGTAAAGCTTATTATTTTAACGAAACATTAGTTCCACTAAATTTTAAAATAAAAAAATTTAAAACATCTAAAACTTAAATGAATTGGGAGATGGGTTTAAATTTGATTAACTTCCAAGTATAAAACTTTTTTTTTTTTACCTCTTATCCAATGTTTTAGTGCTTTATAAAAAAATCAGTTTTCCTATGAAAAGGTATGAAATGGTCATGATAATGGAACTTCTCTTATAATTTGTTATTTCATTATTGGATGATAGTGTTAAGATTTACAGAAAGCATGAATCAACATGAAATTTTCAGGAGAGTACCCGATCAAACGAGTTATATTTAGTATATTTCGTATTCAAAAACTTTGATATCGTAAAAACATTGCAAAGGAAAGGATTGCAATCTTTGACTATTTGACTAAAGAAGCTTTCAATTTAAATTTAAAACCTATTTGTCATCCTAAACTTTTAAATTCTCATTAGAATGCTCATACATGGATCATTACATTCGGAAATGTAGCCTTGGTTGGATGGTTTTGAAAGAAAAAGTAACACTTAACCATTTTATATCGGTATTAAAAACTATGAGTCAATGACACTATTTTACTTACCACTAAAGGTTAGTCATAATTGCAACTGATTTTATTTTTGAGTATTGCTATTTAGTACGAGAGATAAACCCACAAAACACACGATACAATGCAAACTGACAATTATATATATTTATTTTAATAATAAATTAATACAATTAAGACGATTAGCAGAAATCATGGGTCATTCTTAGTGTTATTCTTTGCTTTCGTTGCTTTTTCCTTTTGTACAAACTAGTATTATCCTTTATTTATATATTTATTTAAGCTTCCTACCTAAGTTCTCTTCTTACATTTTTGTTCTTGCAGAGGCTGGAGAATCTAAAATTTCTCAATCTTAGTCATTCTCATTGTTTAGTACAGACCCCAGATTTTTCAAACATGCCTAATCTTGAAAAGCTAATACTCAAAGATTGTCCAAGGCTGTCTGAGGTTTCCCATACCACTGGACATCTCCATAAAGGTCTCATGATAAATTTGAAAGACTGTATTAGCCTTCCTAACCTTCCAAGAACCATGTATACGTTGAAATCTCTGAGAACTCTTATTCTATGGCTGTTTAATTATTAACAAATTGGAAGAGGACTTGGAACAAATGGAATCTTTAACCACTTTGATTGCAGATGACACTGCAATAACAGAAGTGCCCTTTTCACTAACAAGGTAAAAAACAATTGGATATATTTCCTTGTGTGGCTATAAAGGATTTTCACATGAAGTATTTCCTTCGATCATTCGGTCTTGGATGTCACTAACAAATAATCTCTCATCCTTAGTTCAAACACCTGCTGGCATGTCATCTCTTATTTCTTTAGATCCATCAAGAAGTAGTTCCCACTGTCTGTCATCTATTTCCGAGGTCCTTAGAAAGGTTCTTAGTCTTTTGGTAGAGTGCGGCTCAGAACTTCAACTTTCACGAGATGCAATTTTGGATGCTTTAAGTGCAAAGAATTCTAAGGAATTGGAATCAACTGCAACTACATCACAAGTATCAGTTTTAGAGACTTCTAAATTAATTGAATGTTGTGGTCAAGTCACGTTTCAGAAACTAAAAAATCCCTGAGGTCTCTTCTAATTCGAATGGGAATGAATTGCCAAGCTGTCGATATATTTGTTACATTTTTATATATAAAATATTAGAACAGTAAGTTTCGTATAAAAATAGATGAGCACTTAAAGTCTTATAGTTCTGGTTGTTGAATTATTTTTGATAATACCAATTATATGTGAAGAGCCGAGTGTATTGTGGTGTAGTAGTTGGCACTTCTAGTCCCCTTCCCGGCTACTGGACCACTTCATTTCTTTGGGTACTACGGACCCCCTCTGCCATCCATTGCAGCAGAGTCGTTTCAGGAGGGGGGGCTAAGCACAATTTTTACTTCAGAACACTGTCAGATGATCATATTTTTTTACTGATAAAAATGATTATGTTATGAGGAAGGTTACATCTTTCATTGTTGAATAAATGATAATGTGATATTAATATATTAGTACAATTTTGAGCCTACTTTCACGGTTTACAGAATACGACTGTCAAGTCATGTGGTGGTTTCTCGCTCCCTGGTGATAATTATCCAAATTGACTAGCCTTCAATTATGAAGGTTCTTCTGTAATTTTTATAGTTCCTCAAGTGAAAGGGCATAACTTGAAGACAATGATGTGCTTTGTCTATTCTTCAAGCGCAGATAACATAACATCAGATGGACTCAAAAATGTGTTGGTGATAAATCACACGAAGAGCACATTCAGCTCTATAAGAGAGAGGCGTTCGCCACCTTTGAAAATGAGGAGTGGCAGAGAGTAGTATATGGAACCTGGTGACAAAGTCGAGATTGTTGTTGTTTTTGGGAACAGTTTTATTGTGATGAAGACAGCAGTTTATCTCATATATGATGAACCAGTTGGCGAAAATTTGGGGCAATGTCATACTCCAGATGAGAATGTTCTTGTTGGTGATGGTGATGAAAATGAATGTCCTGCCAAGAGGATCACTCTTCAAGTAGAGCTGGCAGAAGATTTCAATCAAAAACAGAAAATAAGAAAACTTGACTGA
Protein sequence

>MS.gene33709.t1

MSNPRNESEDIKDIVEKVTHLLDKTDLFIADHPVRVESRVLDMIQLLDTSFSNDVLLLGMWVLYKKISFPMKSFIVMKTAVYLIYDEPVGENLGQCHTPDENVLVGDGDENECPAKRITLQVELAEDFNQKQKIRKLD