Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33801.t1 | KEH31064.1 | 87.5 | 542 | 38 | 4 | 1 | 523 | 1 | 531 | 4.70E-263 | 916.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33801.t1 | A0A072UMP6 | 87.5 | 542 | 38 | 4 | 1 | 523 | 1 | 531 | 3.4e-263 | 916.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05423 | MS.gene33801 | 0.808086 | 3.68E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33801.t1 | MTR_4g088785 | 88.930 | 542 | 30 | 4 | 1 | 523 | 1 | 531 | 0.0 | 933 |
| MS.gene33801.t1 | MTR_2g013690 | 72.212 | 547 | 116 | 7 | 1 | 523 | 36 | 570 | 0.0 | 721 |
| MS.gene33801.t1 | MTR_2g085170 | 50.177 | 564 | 217 | 11 | 5 | 521 | 43 | 589 | 1.00e-172 | 500 |
| MS.gene33801.t1 | MTR_8g055930 | 39.142 | 373 | 185 | 12 | 106 | 453 | 106 | 461 | 8.34e-66 | 221 |
| MS.gene33801.t1 | MTR_1g096320 | 42.478 | 339 | 149 | 12 | 144 | 453 | 375 | 696 | 2.42e-65 | 225 |
| MS.gene33801.t1 | MTR_1g096320 | 42.478 | 339 | 149 | 12 | 144 | 453 | 369 | 690 | 2.89e-65 | 224 |
| MS.gene33801.t1 | MTR_8g085850 | 35.574 | 357 | 196 | 9 | 118 | 454 | 105 | 447 | 1.49e-62 | 213 |
| MS.gene33801.t1 | MTR_8g085850 | 35.376 | 359 | 188 | 10 | 118 | 454 | 105 | 441 | 3.43e-60 | 206 |
| MS.gene33801.t1 | MTR_8g085850 | 35.376 | 359 | 188 | 10 | 118 | 454 | 114 | 450 | 5.72e-60 | 206 |
| MS.gene33801.t1 | MTR_1g021670 | 35.331 | 317 | 164 | 9 | 164 | 463 | 175 | 467 | 2.60e-40 | 152 |
| MS.gene33801.t1 | MTR_2g019450 | 34.459 | 296 | 154 | 8 | 164 | 438 | 117 | 393 | 1.87e-39 | 149 |
| MS.gene33801.t1 | MTR_8g055930 | 34.737 | 285 | 150 | 9 | 106 | 370 | 106 | 374 | 1.88e-38 | 145 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33801.t1 | AT1G28240 | 61.523 | 486 | 149 | 4 | 4 | 460 | 40 | 516 | 0.0 | 605 |
| MS.gene33801.t1 | AT1G53040 | 50.361 | 554 | 211 | 13 | 3 | 516 | 7 | 536 | 2.44e-167 | 484 |
| MS.gene33801.t1 | AT1G53040 | 50.361 | 554 | 211 | 13 | 3 | 516 | 7 | 536 | 2.44e-167 | 484 |
| MS.gene33801.t1 | AT1G53040 | 50.361 | 554 | 211 | 13 | 3 | 516 | 7 | 536 | 2.44e-167 | 484 |
| MS.gene33801.t1 | AT1G53040 | 52.156 | 487 | 179 | 11 | 3 | 449 | 7 | 479 | 5.22e-154 | 449 |
| MS.gene33801.t1 | AT1G53040 | 52.156 | 487 | 179 | 11 | 3 | 449 | 7 | 479 | 5.22e-154 | 449 |
| MS.gene33801.t1 | AT1G53040 | 48.095 | 420 | 164 | 11 | 3 | 382 | 7 | 412 | 1.58e-109 | 333 |
| MS.gene33801.t1 | AT2G02910 | 38.442 | 385 | 175 | 14 | 99 | 453 | 98 | 450 | 2.86e-66 | 221 |
| MS.gene33801.t1 | AT2G02910 | 38.442 | 385 | 175 | 14 | 99 | 453 | 98 | 450 | 2.86e-66 | 221 |
| MS.gene33801.t1 | AT4G09630 | 39.523 | 377 | 184 | 13 | 118 | 467 | 337 | 696 | 1.67e-65 | 225 |
| MS.gene33801.t1 | AT4G09630 | 39.523 | 377 | 184 | 13 | 118 | 467 | 352 | 711 | 2.36e-65 | 225 |
| MS.gene33801.t1 | AT1G34550 | 43.438 | 320 | 133 | 13 | 164 | 453 | 327 | 628 | 5.50e-63 | 217 |
| MS.gene33801.t1 | AT1G34550 | 43.438 | 320 | 133 | 13 | 164 | 453 | 421 | 722 | 9.71e-63 | 218 |
| MS.gene33801.t1 | AT4G38500 | 36.286 | 350 | 169 | 13 | 117 | 442 | 114 | 433 | 1.76e-53 | 189 |
| MS.gene33801.t1 | AT5G42660 | 34.625 | 387 | 198 | 15 | 107 | 465 | 103 | 462 | 1.42e-45 | 166 |
| MS.gene33801.t1 | AT5G46220 | 33.446 | 296 | 155 | 9 | 160 | 431 | 113 | 390 | 2.29e-34 | 135 |
Find 111 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTACTTTCCAGCAGCTTTAT+TGG | 0.229502 | 4.4:+23989276 | None:intergenic |
| GCAATCTCTTTACTTGTCTT+TGG | 0.249830 | 4.4:-23989036 | MS.gene33801:CDS |
| CTTTGGATCTTCAAGTTTGC+TGG | 0.256889 | 4.4:-23992425 | MS.gene33801:CDS |
| TTAAGTAGAGGTGCAGAATT+TGG | 0.266817 | 4.4:-23991531 | MS.gene33801:CDS |
| AAGGCGGAACTTTGTAATTC+AGG | 0.311262 | 4.4:-23988903 | MS.gene33801:intron |
| GTTGTTGCATCAGCTGTATT+TGG | 0.328487 | 4.4:-23991179 | MS.gene33801:intron |
| TTGGGCTACCATCTTCCTAT+AGG | 0.333976 | 4.4:-23991939 | MS.gene33801:CDS |
| TGGGCTACCATCTTCCTATA+GGG | 0.345876 | 4.4:-23991938 | MS.gene33801:CDS |
| TAGATAGAGTAGCGAGCATT+TGG | 0.354599 | 4.4:+23990483 | None:intergenic |
| GGAAGTTTGGCCTCTGTATA+TGG | 0.358268 | 4.4:+23989199 | None:intergenic |
| AAAGCTTCTGTTGCATAGAT+TGG | 0.362625 | 4.4:-23990508 | MS.gene33801:CDS |
| ACCGCTTATAAGAGGAAGTT+TGG | 0.380454 | 4.4:+23989186 | None:intergenic |
| GAATTTGGTGGTTCGGAGTT+TGG | 0.385068 | 4.4:-23991516 | MS.gene33801:CDS |
| AACATTGCCCTTCCCTTCTC+CGG | 0.385472 | 4.4:-23991589 | MS.gene33801:CDS |
| CCTGAGGGGTTCTGGCAGGC+TGG | 0.391703 | 4.4:-23990980 | MS.gene33801:CDS |
| AATCTATGCAACAGAAGCTT+TGG | 0.395272 | 4.4:+23990510 | None:intergenic |
| CAAGTAAAGAGATTGCTAAT+AGG | 0.397105 | 4.4:+23989043 | None:intergenic |
| CCTTCTTGTAAAACTCGATC+TGG | 0.397408 | 4.4:+23989233 | None:intergenic |
| TGAAGACGACCTTCTTGAAA+TGG | 0.399269 | 4.4:-23991219 | MS.gene33801:CDS |
| CGCCACCGCAAAGTTGTTGC+TGG | 0.399529 | 4.4:-23988390 | MS.gene33801:CDS |
| CTATTACACGGATGCCCTAT+AGG | 0.402333 | 4.4:+23991924 | None:intergenic |
| AACAACTTTGCGGTGGCGCT+TGG | 0.417791 | 4.4:+23988395 | None:intergenic |
| TTTCTTCATCTACAAACATA+AGG | 0.420958 | 4.4:+23991013 | None:intergenic |
| TCCACCGGAAGGTAACTTAC+TGG | 0.423371 | 4.4:+23991633 | None:intergenic |
| CTTACTATTACACATCCTTC+AGG | 0.430460 | 4.4:+23989076 | None:intergenic |
| TTTCACCTACCGCTTATAAG+AGG | 0.435512 | 4.4:+23989178 | None:intergenic |
| CTGAGGGGTTCTGGCAGGCT+GGG | 0.439314 | 4.4:-23990979 | MS.gene33801:CDS |
| CTGGGAATCAGCAAGAAGAT+TGG | 0.445554 | 4.4:-23990961 | MS.gene33801:CDS |
| GCTTATGTTCACACTTATGT+AGG | 0.448519 | 4.4:-23989375 | MS.gene33801:CDS |
| CGTGCAATGGCTTCTTCCAC+CGG | 0.450750 | 4.4:+23991618 | None:intergenic |
| TATGCTAAATTCTGAAGAAC+CGG | 0.452797 | 4.4:+23991570 | None:intergenic |
| TGATATCAGGTGAAGATTCT+CGG | 0.452948 | 4.4:-23992076 | MS.gene33801:intron |
| AGGTGCAGAATTTGGTGGTT+CGG | 0.457980 | 4.4:-23991523 | MS.gene33801:CDS |
| CAAGTTTGCTGGTCGTAAGA+AGG | 0.464912 | 4.4:-23992414 | MS.gene33801:CDS |
| GCTGGTCCCTTGAAGTAAAT+CGG | 0.468904 | 4.4:+23988999 | None:intergenic |
| AGTGTGAACATAAGCAGTTT+AGG | 0.469255 | 4.4:+23989383 | None:intergenic |
| TCAAATCCTGTGTTGCGGCC+AGG | 0.471029 | 4.4:+23991248 | None:intergenic |
| CTTCCAGGGCCTCTTCCAAC+CGG | 0.476663 | 4.4:+23988444 | None:intergenic |
| AAGTTGACCGATTTACTTCA+AGG | 0.477130 | 4.4:-23989006 | MS.gene33801:CDS |
| TCGTTTCTCTGCTTCAAAGT+AGG | 0.477669 | 4.4:+23991486 | None:intergenic |
| CACACTTATGTAGGTTTCTG+TGG | 0.479071 | 4.4:-23989366 | MS.gene33801:CDS |
| GCTTGAAACGTCTCCCGAAA+AGG | 0.484124 | 4.4:-23988478 | MS.gene33801:CDS |
| TACTTCCAGCAACAACTTTG+CGG | 0.484994 | 4.4:+23988385 | None:intergenic |
| CGTGGAAAAGATAAAAGATC+TGG | 0.485251 | 4.4:-23988420 | MS.gene33801:CDS |
| TCACCGGTTGGAAGAGGCCC+TGG | 0.491778 | 4.4:-23988447 | MS.gene33801:CDS |
| TCGGGAGACGTTTCAAGCAT+AGG | 0.492952 | 4.4:+23988483 | None:intergenic |
| GCAGAAGCCAATAAAGCTGC+TGG | 0.495208 | 4.4:-23989283 | MS.gene33801:CDS |
| TCAAGCATAGGCAATGGAGG+TGG | 0.497114 | 4.4:+23988495 | None:intergenic |
| AAATTCTGAAGAACCGGAGA+AGG | 0.497687 | 4.4:+23991576 | None:intergenic |
| CGAAAAGGTTGTAGCTTCAC+CGG | 0.499747 | 4.4:-23988463 | MS.gene33801:CDS |
| GGAATTTGAGCAGTGGTCAC+TGG | 0.503096 | 4.4:+23988531 | None:intergenic |
| CTCGATCTGGGAGTCAATAG+AGG | 0.504764 | 4.4:+23989246 | None:intergenic |
| GTAGCTTCACCGGTTGGAAG+AGG | 0.513350 | 4.4:-23988453 | MS.gene33801:CDS |
| CCACCGGAAGGTAACTTACT+GGG | 0.516565 | 4.4:+23991634 | None:intergenic |
| ATATGTTCTTGGATTGTGAA+AGG | 0.521275 | 4.4:-23988922 | MS.gene33801:CDS |
| GATATCAGGTGAAGATTCTC+GGG | 0.522045 | 4.4:-23992075 | MS.gene33801:intron |
| CTTGAAATGGATCAGTGTAA+TGG | 0.523846 | 4.4:-23991206 | MS.gene33801:CDS |
| CAAGCATAGGCAATGGAGGT+GGG | 0.527098 | 4.4:+23988496 | None:intergenic |
| CCAGCCTGCCAGAACCCCTC+AGG | 0.527394 | 4.4:+23990980 | None:intergenic |
| TTTGCTGGTCGTAAGAAGGT+TGG | 0.531006 | 4.4:-23992410 | MS.gene33801:CDS |
| AGCATAGGCAATGGAGGTGG+GGG | 0.534716 | 4.4:+23988498 | None:intergenic |
| AGTAGAGGTGCAGAATTTGG+TGG | 0.545458 | 4.4:-23991528 | MS.gene33801:CDS |
| TACACTGATCCATTTCAAGA+AGG | 0.546610 | 4.4:+23991210 | None:intergenic |
| AATACCTGAGGGGTTCTGGC+AGG | 0.549609 | 4.4:-23990984 | MS.gene33801:CDS |
| ACTAAACCTGGCCGCAACAC+AGG | 0.550697 | 4.4:-23991254 | MS.gene33801:CDS |
| CAATGTTGGCATCCGTGCAA+TGG | 0.551345 | 4.4:+23991605 | None:intergenic |
| CTGAAGAACCGGAGAAGGGA+AGG | 0.552383 | 4.4:+23991581 | None:intergenic |
| GGAGAAGGGAAGGGCAATGT+TGG | 0.556921 | 4.4:+23991591 | None:intergenic |
| TTTGGTGGTTCGGAGTTTGG+TGG | 0.558315 | 4.4:-23991513 | MS.gene33801:CDS |
| AAGGTTGTAGCTTCACCGGT+TGG | 0.560098 | 4.4:-23988459 | MS.gene33801:CDS |
| TCAGCAAGAAGATTGGTTTG+TGG | 0.569901 | 4.4:-23990954 | MS.gene33801:CDS |
| GACGTTTCAAGCATAGGCAA+TGG | 0.570364 | 4.4:+23988489 | None:intergenic |
| GGAAGAGGCCCTGGAAGGCG+TGG | 0.579917 | 4.4:-23988438 | MS.gene33801:CDS |
| AAGCATAGGCAATGGAGGTG+GGG | 0.580888 | 4.4:+23988497 | None:intergenic |
| TATGAAGAAAATTTAAGTAG+AGG | 0.585258 | 4.4:-23991543 | MS.gene33801:CDS |
| ATTAGCTCTAATACTCTGCA+TGG | 0.588754 | 4.4:+23992043 | None:intergenic |
| CGGTGGAAGAAGCCATTGCA+CGG | 0.593807 | 4.4:-23991617 | MS.gene33801:CDS |
| CCCAGTAAGTTACCTTCCGG+TGG | 0.597326 | 4.4:-23991634 | MS.gene33801:CDS |
| ACGGATGCCCTATAGGAAGA+TGG | 0.599528 | 4.4:+23991931 | None:intergenic |
| ATTTGAGCAGTGGTCACTGG+TGG | 0.599984 | 4.4:+23988534 | None:intergenic |
| CGGTTGGAAGAGGCCCTGGA+AGG | 0.603662 | 4.4:-23988443 | MS.gene33801:CDS |
| CTTCTTGTAAAACTCGATCT+GGG | 0.604503 | 4.4:+23989234 | None:intergenic |
| ATGCCCAGTAAGTTACCTTC+CGG | 0.604621 | 4.4:-23991637 | MS.gene33801:CDS |
| AGTTGACCGATTTACTTCAA+GGG | 0.607890 | 4.4:-23989005 | MS.gene33801:CDS |
| TCAGGTGAAGATTCTCGGGA+AGG | 0.608373 | 4.4:-23992071 | MS.gene33801:intron |
| CTCTCCGTCTGAAGTATCGA+CGG | 0.609077 | 4.4:-23992000 | MS.gene33801:CDS |
| GCATCAATCAGATTTGTAAG+AGG | 0.611517 | 4.4:-23991278 | MS.gene33801:intron |
| TTTGTAAGAGGAACTAAACC+TGG | 0.619439 | 4.4:-23991266 | MS.gene33801:CDS |
| CAGCAGCAGAGATGAGACAG+AGG | 0.621390 | 4.4:+23992378 | None:intergenic |
| ACGCTTTGATGTATTTGTCG+AGG | 0.623038 | 4.4:-23989305 | MS.gene33801:CDS |
| AGTCAATGAGTGTGCACTGT+GGG | 0.625562 | 4.4:-23991446 | MS.gene33801:intron |
| AATTCTGAAGAACCGGAGAA+GGG | 0.625910 | 4.4:+23991577 | None:intergenic |
| GCCAAACTTCCTCTTATAAG+CGG | 0.626059 | 4.4:-23989187 | MS.gene33801:intron |
| TGAAGAACCGGAGAAGGGAA+GGG | 0.630078 | 4.4:+23991582 | None:intergenic |
| CAATGGCTTCTTCCACCGGA+AGG | 0.630189 | 4.4:+23991622 | None:intergenic |
| CAATGTCAAATCCTGTGTTG+CGG | 0.637432 | 4.4:+23991243 | None:intergenic |
| TTCCAGCAACAACTTTGCGG+TGG | 0.637995 | 4.4:+23988388 | None:intergenic |
| GTTTCAAGCATAGGCAATGG+AGG | 0.642918 | 4.4:+23988492 | None:intergenic |
| GGTGTTCACAGAAATACCAC+AGG | 0.648519 | 4.4:-23988578 | MS.gene33801:intron |
| GGTGTTCCAGATGTTCCTGA+AGG | 0.649291 | 4.4:-23989091 | MS.gene33801:intron |
| ACTTATGTAGGTTTCTGTGG+AGG | 0.654390 | 4.4:-23989363 | MS.gene33801:CDS |
| TGACAGAGGAATTTGAGCAG+TGG | 0.666246 | 4.4:+23988524 | None:intergenic |
| AAAATATAAGTGATTATTCG+GGG | 0.667462 | 4.4:-23991050 | MS.gene33801:CDS |
| GGCAATGTGAAACTATTACA+CGG | 0.667987 | 4.4:+23991912 | None:intergenic |
| TGTTCTTGGATTGTGAAAGG+CGG | 0.672575 | 4.4:-23988919 | MS.gene33801:CDS |
| TCAGACGGAGAGTCACTCGT+AGG | 0.697685 | 4.4:+23992011 | None:intergenic |
| AATGGATCAGTGTAATGGAG+TGG | 0.722153 | 4.4:-23991201 | MS.gene33801:CDS |
| GGGGTTGACACCATATACAG+AGG | 0.725173 | 4.4:-23989209 | MS.gene33801:CDS |
| GACGCAGCAGTAAATCCCTG+TGG | 0.740502 | 4.4:+23988562 | None:intergenic |
| GTGTTCACAGAAATACCACA+GGG | 0.758203 | 4.4:-23988577 | MS.gene33801:intron |
| GAGTCAATGAGTGTGCACTG+TGG | 0.796361 | 4.4:-23991447 | MS.gene33801:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCAACATATAAAAAAATTT+AGG | + | chr4.4:23991303-23991322 | None:intergenic | 10.0% |
| !! | AAAAATATAAGTGATTATTC+GGG | - | chr4.4:23989772-23989791 | MS.gene33801:intron | 15.0% |
| !! | AAATTGAATAATCATATTGT+TGG | - | chr4.4:23990074-23990093 | MS.gene33801:intron | 15.0% |
| !! | AAGAAAGAAAGAAAAAAAAA+CGG | + | chr4.4:23990100-23990119 | None:intergenic | 15.0% |
| !! | ACAAAATTTGAAGAAATTAT+TGG | + | chr4.4:23989048-23989067 | None:intergenic | 15.0% |
| !! | ACTATATGAATTAGAAAATA+TGG | + | chr4.4:23990251-23990270 | None:intergenic | 15.0% |
| !! | CAAAAATATAAGTGATTATT+CGG | - | chr4.4:23989771-23989790 | MS.gene33801:intron | 15.0% |
| !! | TATAATTATATATACCATTC+AGG | - | chr4.4:23989724-23989743 | MS.gene33801:intron | 15.0% |
| !! | TATCATAATATGATAATAAG+AGG | + | chr4.4:23988514-23988533 | None:intergenic | 15.0% |
| !!! | AATAATTTCTTCAAATTTTG+TGG | - | chr4.4:23989047-23989066 | MS.gene33801:CDS | 15.0% |
| !!! | AATTTTTTTATATGTTGATC+CGG | - | chr4.4:23991304-23991323 | MS.gene33801:intron | 15.0% |
| !!! | GAATAATCACTTATATTTTT+GGG | + | chr4.4:23989772-23989791 | None:intergenic | 15.0% |
| !!! | TGTTAGATATATTGTTTTAT+CGG | - | chr4.4:23990475-23990494 | MS.gene33801:intron | 15.0% |
| !!! | TTTACTATCTTTTTAATCTA+AGG | - | chr4.4:23988983-23989002 | MS.gene33801:CDS | 15.0% |
| !! | AAAAACTTCAGTAACAAAAA+TGG | + | chr4.4:23990009-23990028 | None:intergenic | 20.0% |
| !! | AAAATATAAGTGATTATTCG+GGG | - | chr4.4:23989773-23989792 | MS.gene33801:intron | 20.0% |
| !! | AATAAAGCAGATGTTTAATA+TGG | + | chr4.4:23990456-23990475 | None:intergenic | 20.0% |
| !! | ATAAAGCAGATGTTTAATAT+GGG | + | chr4.4:23990455-23990474 | None:intergenic | 20.0% |
| !! | CATATAGAAAAACATAACTA+CGG | + | chr4.4:23990034-23990053 | None:intergenic | 20.0% |
| !! | TATGAAGAAAATTTAAGTAG+AGG | - | chr4.4:23989280-23989299 | MS.gene33801:CDS | 20.0% |
| !! | TATTGTATTAATAGACAATG+TGG | + | chr4.4:23991032-23991051 | None:intergenic | 20.0% |
| !!! | AGAAAGAACAATTTTTTCTT+TGG | - | chr4.4:23988381-23988400 | MS.gene33801:CDS | 20.0% |
| !!! | CGAATAATCACTTATATTTT+TGG | + | chr4.4:23989773-23989792 | None:intergenic | 20.0% |
| !!! | TGTATTTTTCTCAAACTTAA+TGG | - | chr4.4:23991708-23991727 | MS.gene33801:intron | 20.0% |
| !!! | TTATTGTAGCTTCTTTTTTT+GGG | - | chr4.4:23992221-23992240 | MS.gene33801:intron | 20.0% |
| !!! | TTTTATCTTGTTTGTATATC+TGG | - | chr4.4:23991949-23991968 | MS.gene33801:CDS | 20.0% |
| !!! | TTTTCATTTCAATATGTTCT+TGG | - | chr4.4:23991890-23991909 | MS.gene33801:CDS | 20.0% |
| ! | AAAGGTTGGAATTACATATT+TGG | - | chr4.4:23989942-23989961 | MS.gene33801:intron | 25.0% |
| ! | ATAGATACGTTAATCACAAT+GGG | - | chr4.4:23990375-23990394 | MS.gene33801:intron | 25.0% |
| ! | CACATTATCACCTAATTAAA+CGG | + | chr4.4:23988710-23988729 | None:intergenic | 25.0% |
| ! | CTAGGTAAGTATAGATATAA+GGG | + | chr4.4:23989430-23989449 | None:intergenic | 25.0% |
| ! | CTTATATCTATACTTACCTA+GGG | - | chr4.4:23989429-23989448 | MS.gene33801:CDS | 25.0% |
| ! | CTTCAAAACTTCATTATGTT+TGG | + | chr4.4:23990989-23991008 | None:intergenic | 25.0% |
| ! | GAAAAACACAAGGATATTTA+TGG | + | chr4.4:23990962-23990981 | None:intergenic | 25.0% |
| ! | GAAACTTCCTCTATATATTT+GGG | - | chr4.4:23991664-23991683 | MS.gene33801:intron | 25.0% |
| ! | GCGTAAAAACAAGTAAATAA+AGG | + | chr4.4:23989690-23989709 | None:intergenic | 25.0% |
| ! | TCAAAGTCAGAAAACATATT+AGG | + | chr4.4:23991372-23991391 | None:intergenic | 25.0% |
| ! | TCCCAAAAATAATTAGATCA+GGG | + | chr4.4:23990583-23990602 | None:intergenic | 25.0% |
| ! | TCTATGAAAAAAGTGGTAAA+AGG | + | chr4.4:23990291-23990310 | None:intergenic | 25.0% |
| ! | TGAAACTTCCTCTATATATT+TGG | - | chr4.4:23991663-23991682 | MS.gene33801:intron | 25.0% |
| ! | TTGAGAAAAATACATTACAC+AGG | + | chr4.4:23991702-23991721 | None:intergenic | 25.0% |
| ! | TTTAGAAGAGTCAATTTGTA+AGG | + | chr4.4:23991115-23991134 | None:intergenic | 25.0% |
| ! | TTTCTTCATCTACAAACATA+AGG | + | chr4.4:23989813-23989832 | None:intergenic | 25.0% |
| !! | AACCATTAGTTTATCATCAA+TGG | + | chr4.4:23991177-23991196 | None:intergenic | 25.0% |
| !! | ATTTTTCTCAAACTTAATGG+TGG | - | chr4.4:23991711-23991730 | MS.gene33801:intron | 25.0% |
| !! | GTTATTATTGTTTCTCTTGA+GGG | - | chr4.4:23992131-23992150 | MS.gene33801:intron | 25.0% |
| !! | TACCATTGATGATAAACTAA+TGG | - | chr4.4:23991172-23991191 | MS.gene33801:intron | 25.0% |
| !! | TATCTGGCTATAATAACTTT+TGG | - | chr4.4:23991965-23991984 | MS.gene33801:CDS | 25.0% |
| !! | TCTTCAGTTTTCTGAATATT+TGG | - | chr4.4:23989141-23989160 | MS.gene33801:intron | 25.0% |
| !! | TTTGGAATCTATGAAAAAAG+TGG | + | chr4.4:23990298-23990317 | None:intergenic | 25.0% |
| !! | TTTTCAATCTACATATGACA+TGG | - | chr4.4:23990735-23990754 | MS.gene33801:intron | 25.0% |
| !!! | ATTTAAGTTTTTCACACTCA+TGG | + | chr4.4:23990224-23990243 | None:intergenic | 25.0% |
| !!! | CTTATTGTAGCTTCTTTTTT+TGG | - | chr4.4:23992220-23992239 | MS.gene33801:intron | 25.0% |
| !!! | CTTTTTAATCTAAGGTTTCT+TGG | - | chr4.4:23988991-23989010 | MS.gene33801:CDS | 25.0% |
| !!! | GTTAGACTACTTAATTTGTA+TGG | - | chr4.4:23989018-23989037 | MS.gene33801:CDS | 25.0% |
| !!! | TATTGTAGCTTCTTTTTTTG+GGG | - | chr4.4:23992222-23992241 | MS.gene33801:intron | 25.0% |
| !!! | TTTAAGTTTTTCACACTCAT+GGG | + | chr4.4:23990223-23990242 | None:intergenic | 25.0% |
| AAAAAATAGTTAGGTGGAGA+AGG | + | chr4.4:23988866-23988885 | None:intergenic | 30.0% | |
| AAAATAATCTGACAGTATGC+AGG | + | chr4.4:23990425-23990444 | None:intergenic | 30.0% | |
| AAAGAAGCTACAATAAGCAA+AGG | + | chr4.4:23992217-23992236 | None:intergenic | 30.0% | |
| AAATAATCTGACAGTATGCA+GGG | + | chr4.4:23990424-23990443 | None:intergenic | 30.0% | |
| AAGAAAATTCTGAACCACAT+TGG | + | chr4.4:23992092-23992111 | None:intergenic | 30.0% | |
| AAGAAACAGAAAAATACCTG+AGG | - | chr4.4:23989827-23989846 | MS.gene33801:intron | 30.0% | |
| AAGTAAATGAGCAATGAACA+AGG | + | chr4.4:23992174-23992193 | None:intergenic | 30.0% | |
| AGAAACAGAAAAATACCTGA+GGG | - | chr4.4:23989828-23989847 | MS.gene33801:intron | 30.0% | |
| AGTGTTAATTCTAAACATGC+AGG | + | chr4.4:23990703-23990722 | None:intergenic | 30.0% | |
| ATAATAACCATTGACACAAG+AGG | + | chr4.4:23992119-23992138 | None:intergenic | 30.0% | |
| ATAATGTGATTCCTGTGATA+TGG | - | chr4.4:23988722-23988741 | MS.gene33801:intron | 30.0% | |
| ATATGTTCTTGGATTGTGAA+AGG | - | chr4.4:23991901-23991920 | MS.gene33801:CDS | 30.0% | |
| ATCCCAAATGAATTGCATTT+CGG | + | chr4.4:23991338-23991357 | None:intergenic | 30.0% | |
| CAAGTAAAGAGATTGCTAAT+AGG | + | chr4.4:23991783-23991802 | None:intergenic | 30.0% | |
| CAATTCTATGATCATAATGC+TGG | + | chr4.4:23992017-23992036 | None:intergenic | 30.0% | |
| CCCAAAAATAATTAGATCAG+GGG | + | chr4.4:23990582-23990601 | None:intergenic | 30.0% | |
| CCTAGGTAAGTATAGATATA+AGG | + | chr4.4:23989431-23989450 | None:intergenic | 30.0% | |
| CCTTATATCTATACTTACCT+AGG | - | chr4.4:23989428-23989447 | MS.gene33801:CDS | 30.0% | |
| CTCTATTCCCAAATATATAG+AGG | + | chr4.4:23991674-23991693 | None:intergenic | 30.0% | |
| GATAGATACGTTAATCACAA+TGG | - | chr4.4:23990374-23990393 | MS.gene33801:intron | 30.0% | |
| GTCCCAAAAATAATTAGATC+AGG | + | chr4.4:23990584-23990603 | None:intergenic | 30.0% | |
| TAATTATATGCCAATCCTGA+TGG | + | chr4.4:23989974-23989993 | None:intergenic | 30.0% | |
| TATACAACATGTAGAACTAC+AGG | + | chr4.4:23990507-23990526 | None:intergenic | 30.0% | |
| TATATGATCTGATTGTTGCT+GGG | - | chr4.4:23990048-23990067 | MS.gene33801:intron | 30.0% | |
| TCATTGCTCATTTACTTTCA+TGG | - | chr4.4:23992177-23992196 | MS.gene33801:intron | 30.0% | |
| TCCTGTTTGAAAAAAATCCT+TGG | - | chr4.4:23988677-23988696 | MS.gene33801:intron | 30.0% | |
| TGATAATAAGAGGAGAAATG+AGG | + | chr4.4:23988504-23988523 | None:intergenic | 30.0% | |
| TTGTAAGGTAAAAAGCTCTT+TGG | + | chr4.4:23991100-23991119 | None:intergenic | 30.0% | |
| ! | ACCCCTGATCTAATTATTTT+TGG | - | chr4.4:23990578-23990597 | MS.gene33801:intron | 30.0% |
| ! | GGTTATTATTGTTTCTCTTG+AGG | - | chr4.4:23992130-23992149 | MS.gene33801:intron | 30.0% |
| ! | TACCACAATGCATATCTTTT+TGG | - | chr4.4:23991415-23991434 | MS.gene33801:intron | 30.0% |
| ! | TATGCTAAATTCTGAAGAAC+CGG | + | chr4.4:23989256-23989275 | None:intergenic | 30.0% |
| ! | TTAAGTTTTTCACACTCATG+GGG | + | chr4.4:23990222-23990241 | None:intergenic | 30.0% |
| !! | ATGGCTTTAGATGATATAAG+AGG | - | chr4.4:23990754-23990773 | MS.gene33801:intron | 30.0% |
| !! | CCCCTGATCTAATTATTTTT+GGG | - | chr4.4:23990579-23990598 | MS.gene33801:intron | 30.0% |
| !!! | ATTGTAGCTTCTTTTTTTGG+GGG | - | chr4.4:23992223-23992242 | MS.gene33801:intron | 30.0% |
| !!! | GGGTATGTTTTGCTTTTTTT+AGG | - | chr4.4:23989397-23989416 | MS.gene33801:CDS | 30.0% |
| !!! | TCTCCACCTAACTATTTTTT+GGG | - | chr4.4:23988866-23988885 | MS.gene33801:intron | 30.0% |
| !!! | TTCTCCACCTAACTATTTTT+TGG | - | chr4.4:23988865-23988884 | MS.gene33801:intron | 30.0% |
| AAAAATTTAGGTGCCCACTT+TGG | + | chr4.4:23991291-23991310 | None:intergenic | 35.0% | |
| AAAGCTTCTGTTGCATAGAT+TGG | - | chr4.4:23990315-23990334 | MS.gene33801:intron | 35.0% | |
| AACATGCAGGATTATCAGTA+AGG | + | chr4.4:23990690-23990709 | None:intergenic | 35.0% | |
| AATAATCTGACAGTATGCAG+GGG | + | chr4.4:23990423-23990442 | None:intergenic | 35.0% | |
| AATCTATGCAACAGAAGCTT+TGG | + | chr4.4:23990316-23990335 | None:intergenic | 35.0% | |
| ACATGCAGGATTATCAGTAA+GGG | + | chr4.4:23990689-23990708 | None:intergenic | 35.0% | |
| AGTGTGAACATAAGCAGTTT+AGG | + | chr4.4:23991443-23991462 | None:intergenic | 35.0% | |
| CAACTGCTGATGAGAAAATA+TGG | + | chr4.4:23991249-23991268 | None:intergenic | 35.0% | |
| CACCAAAAAGATATGCATTG+TGG | + | chr4.4:23991420-23991439 | None:intergenic | 35.0% | |
| CATGTACATACAACACAATC+AGG | + | chr4.4:23990616-23990635 | None:intergenic | 35.0% | |
| CGTGGAAAAGATAAAAGATC+TGG | - | chr4.4:23992403-23992422 | MS.gene33801:CDS | 35.0% | |
| CTATATGATCTGATTGTTGC+TGG | - | chr4.4:23990047-23990066 | MS.gene33801:intron | 35.0% | |
| CTTACTATTACACATCCTTC+AGG | + | chr4.4:23991750-23991769 | None:intergenic | 35.0% | |
| CTTCTTGTAAAACTCGATCT+GGG | + | chr4.4:23991592-23991611 | None:intergenic | 35.0% | |
| CTTGAAATGGATCAGTGTAA+TGG | - | chr4.4:23989617-23989636 | MS.gene33801:intron | 35.0% | |
| GAAACAGAAAAATACCTGAG+GGG | - | chr4.4:23989829-23989848 | MS.gene33801:intron | 35.0% | |
| GCAATCTCTTTACTTGTCTT+TGG | - | chr4.4:23991787-23991806 | MS.gene33801:intron | 35.0% | |
| GCATCAATCAGATTTGTAAG+AGG | - | chr4.4:23989545-23989564 | MS.gene33801:intron | 35.0% | |
| GCTTATGTTCACACTTATGT+AGG | - | chr4.4:23991448-23991467 | MS.gene33801:CDS | 35.0% | |
| GGCAATGTGAAACTATTACA+CGG | + | chr4.4:23988914-23988933 | None:intergenic | 35.0% | |
| GGTAAGTATAGATATAAGGG+AGG | + | chr4.4:23989427-23989446 | None:intergenic | 35.0% | |
| GTAAACTAAAACTTACGACG+TGG | + | chr4.4:23988968-23988987 | None:intergenic | 35.0% | |
| GTTTGGCTATGAAAAACACA+AGG | + | chr4.4:23990972-23990991 | None:intergenic | 35.0% | |
| TAAAACCAAGAGATGCACAT+TGG | + | chr4.4:23990789-23990808 | None:intergenic | 35.0% | |
| TACACTGATCCATTTCAAGA+AGG | + | chr4.4:23989616-23989635 | None:intergenic | 35.0% | |
| TAGCCCAAAAAATAGTTAGG+TGG | + | chr4.4:23988872-23988891 | None:intergenic | 35.0% | |
| TATTACCAATGTGCATCTCT+TGG | - | chr4.4:23990781-23990800 | MS.gene33801:intron | 35.0% | |
| TCACCTAATTAAACGGAGTT+CGG | + | chr4.4:23988703-23988722 | None:intergenic | 35.0% | |
| TCATTAACTACTTGAACTCG+TGG | + | chr4.4:23988615-23988634 | None:intergenic | 35.0% | |
| TCCCAAATGAATTGCATTTC+GGG | + | chr4.4:23991337-23991356 | None:intergenic | 35.0% | |
| TCCCGAAATGCAATTCATTT+GGG | - | chr4.4:23991333-23991352 | MS.gene33801:intron | 35.0% | |
| TCTCGTCAAAATTTCCTGAA+TGG | + | chr4.4:23989741-23989760 | None:intergenic | 35.0% | |
| TCTGTTGATATTGAGGATCA+GGG | - | chr4.4:23989072-23989091 | MS.gene33801:CDS | 35.0% | |
| TGACAGTTGAAAAACTAAGC+TGG | + | chr4.4:23991845-23991864 | None:intergenic | 35.0% | |
| TGATATCAGGTGAAGATTCT+CGG | - | chr4.4:23988747-23988766 | MS.gene33801:intron | 35.0% | |
| TGGTAGCCCAAAAAATAGTT+AGG | + | chr4.4:23988875-23988894 | None:intergenic | 35.0% | |
| TGTGGTTTCTGTTGATATTG+AGG | - | chr4.4:23989065-23989084 | MS.gene33801:CDS | 35.0% | |
| TTCTGTTGATATTGAGGATC+AGG | - | chr4.4:23989071-23989090 | MS.gene33801:CDS | 35.0% | |
| TTTATATGTTGATCCGGAGT+CGG | - | chr4.4:23991310-23991329 | MS.gene33801:intron | 35.0% | |
| TTTGTAAGAGGAACTAAACC+TGG | - | chr4.4:23989557-23989576 | MS.gene33801:intron | 35.0% | |
| ! | AAGTTGACCGATTTACTTCA+AGG | - | chr4.4:23991817-23991836 | MS.gene33801:intron | 35.0% |
| ! | AATTAGTCTGCCAAGACATA+AGG | - | chr4.4:23990895-23990914 | MS.gene33801:intron | 35.0% |
| ! | ACTCACAATCGATTCAACTT+CGG | + | chr4.4:23988645-23988664 | None:intergenic | 35.0% |
| ! | AGTTGACCGATTTACTTCAA+GGG | - | chr4.4:23991818-23991837 | MS.gene33801:intron | 35.0% |
| ! | ATCGAGTTTTACAAGAAGGA+GGG | - | chr4.4:23991594-23991613 | MS.gene33801:CDS | 35.0% |
| ! | TAAGTTTTTCACACTCATGG+GGG | + | chr4.4:23990221-23990240 | None:intergenic | 35.0% |
| ! | TCAGGGACAAAATTTTGTCA+CGG | - | chr4.4:23991862-23991881 | MS.gene33801:intron | 35.0% |
| ! | TTAAGTAGAGGTGCAGAATT+TGG | - | chr4.4:23989292-23989311 | MS.gene33801:CDS | 35.0% |
| ! | TTCATATGGGTTTTCTACGT+TGG | - | chr4.4:23988470-23988489 | MS.gene33801:CDS | 35.0% |
| !! | AGCTTAGTTTTTCAACTGTC+AGG | - | chr4.4:23991844-23991863 | MS.gene33801:intron | 35.0% |
| !! | ATTAGCTCTAATACTCTGCA+TGG | + | chr4.4:23988783-23988802 | None:intergenic | 35.0% |
| !! | GCTTAGTTTTTCAACTGTCA+GGG | - | chr4.4:23991845-23991864 | MS.gene33801:intron | 35.0% |
| !! | GTTTTACTGATTGTTCCTCA+AGG | - | chr4.4:23990154-23990173 | MS.gene33801:intron | 35.0% |
| !!! | GCCAAGGATTTTTTTCAAAC+AGG | + | chr4.4:23988681-23988700 | None:intergenic | 35.0% |
| !!! | TACTTTTCCCTCTAAAGCAA+GGG | + | chr4.4:23991143-23991162 | None:intergenic | 35.0% |
| !!! | TTACTTTTCCCTCTAAAGCA+AGG | + | chr4.4:23991144-23991163 | None:intergenic | 35.0% |
| !!! | TTGTAGCTTCTTTTTTTGGG+GGG | - | chr4.4:23992224-23992243 | MS.gene33801:intron | 35.0% |
| AACTTCCTCTTATAAGCGGT+AGG | - | chr4.4:23991640-23991659 | MS.gene33801:CDS | 40.0% | |
| AAGGCGGAACTTTGTAATTC+AGG | - | chr4.4:23991920-23991939 | MS.gene33801:CDS | 40.0% | |
| ACAACTTAACTCCTTCAGGA+TGG | + | chr4.4:23990131-23990150 | None:intergenic | 40.0% | |
| ACACACATAATTGACGATGG+GGG | + | chr4.4:23989523-23989542 | None:intergenic | 40.0% | |
| ACCGCTTATAAGAGGAAGTT+TGG | + | chr4.4:23991640-23991659 | None:intergenic | 40.0% | |
| ACGCTTTGATGTATTTGTCG+AGG | - | chr4.4:23991518-23991537 | MS.gene33801:CDS | 40.0% | |
| ACTTATGTAGGTTTCTGTGG+AGG | - | chr4.4:23991460-23991479 | MS.gene33801:CDS | 40.0% | |
| CAATGTCAAATCCTGTGTTG+CGG | + | chr4.4:23989583-23989602 | None:intergenic | 40.0% | |
| CACACACATAATTGACGATG+GGG | + | chr4.4:23989524-23989543 | None:intergenic | 40.0% | |
| CACACTTATGTAGGTTTCTG+TGG | - | chr4.4:23991457-23991476 | MS.gene33801:CDS | 40.0% | |
| CCTTCTTGTAAAACTCGATC+TGG | + | chr4.4:23991593-23991612 | None:intergenic | 40.0% | |
| CTACAATAAGCAAAGGAGAG+AGG | + | chr4.4:23992210-23992229 | None:intergenic | 40.0% | |
| CTGAGAACGAAGCAAGTTAA+AGG | - | chr4.4:23992461-23992480 | MS.gene33801:CDS | 40.0% | |
| CTGATATCACACCATATCAC+AGG | + | chr4.4:23988736-23988755 | None:intergenic | 40.0% | |
| CTGTGATATGGTGTGATATC+AGG | - | chr4.4:23988734-23988753 | MS.gene33801:intron | 40.0% | |
| CTTATTCCTCCTTCCAAAGT+GGG | - | chr4.4:23991275-23991294 | MS.gene33801:intron | 40.0% | |
| CTTGAAACCTCTTGTGTCAA+TGG | - | chr4.4:23992109-23992128 | MS.gene33801:intron | 40.0% | |
| CTTTCTATACTCCATCCTGA+AGG | - | chr4.4:23990117-23990136 | MS.gene33801:intron | 40.0% | |
| GATATCAGGTGAAGATTCTC+GGG | - | chr4.4:23988748-23988767 | MS.gene33801:intron | 40.0% | |
| GCACACACATAATTGACGAT+GGG | + | chr4.4:23989525-23989544 | None:intergenic | 40.0% | |
| GCAGTGCTTCATTATACACA+CGG | + | chr4.4:23989471-23989490 | None:intergenic | 40.0% | |
| GCCAAACTTCCTCTTATAAG+CGG | - | chr4.4:23991636-23991655 | MS.gene33801:CDS | 40.0% | |
| GTCCCGAAATGCAATTCATT+TGG | - | chr4.4:23991332-23991351 | MS.gene33801:intron | 40.0% | |
| GTGTTCACAGAAATACCACA+GGG | - | chr4.4:23992246-23992265 | MS.gene33801:intron | 40.0% | |
| GTTGTTGCATCAGCTGTATT+TGG | - | chr4.4:23989644-23989663 | MS.gene33801:intron | 40.0% | |
| TACTTCCAGCAACAACTTTG+CGG | + | chr4.4:23992441-23992460 | None:intergenic | 40.0% | |
| TAGATAGAGTAGCGAGCATT+TGG | + | chr4.4:23990343-23990362 | None:intergenic | 40.0% | |
| TCAAGGCACAGAATGAAGAA+GGG | - | chr4.4:23990171-23990190 | MS.gene33801:intron | 40.0% | |
| TCGTTTCTCTGCTTCAAAGT+AGG | + | chr4.4:23989340-23989359 | None:intergenic | 40.0% | |
| TCTTATTCCTCCTTCCAAAG+TGG | - | chr4.4:23991274-23991293 | MS.gene33801:intron | 40.0% | |
| TGAAGACGACCTTCTTGAAA+TGG | - | chr4.4:23989604-23989623 | MS.gene33801:intron | 40.0% | |
| TGGAGAGACATTGTGTACTA+GGG | + | chr4.4:23991012-23991031 | None:intergenic | 40.0% | |
| TGTTCTTGGATTGTGAAAGG+CGG | - | chr4.4:23991904-23991923 | MS.gene33801:CDS | 40.0% | |
| TTCCTTACACAGATGCAAGA+CGG | - | chr4.4:23989914-23989933 | MS.gene33801:intron | 40.0% | |
| TTGAGGATCAGGGATAATGT+TGG | - | chr4.4:23989082-23989101 | MS.gene33801:CDS | 40.0% | |
| TTTCACCTACCGCTTATAAG+AGG | + | chr4.4:23991648-23991667 | None:intergenic | 40.0% | |
| ! | AAATTCTGAAGAACCGGAGA+AGG | + | chr4.4:23989250-23989269 | None:intergenic | 40.0% |
| ! | AATGGATCAGTGTAATGGAG+TGG | - | chr4.4:23989622-23989641 | MS.gene33801:intron | 40.0% |
| ! | AATTCTGAAGAACCGGAGAA+GGG | + | chr4.4:23989249-23989268 | None:intergenic | 40.0% |
| ! | CAGGGACAAAATTTTGTCAC+GGG | - | chr4.4:23991863-23991882 | MS.gene33801:intron | 40.0% |
| ! | CCAGATCGAGTTTTACAAGA+AGG | - | chr4.4:23991590-23991609 | MS.gene33801:CDS | 40.0% |
| ! | CTTTGGATCTTCAAGTTTGC+TGG | - | chr4.4:23988398-23988417 | MS.gene33801:CDS | 40.0% |
| ! | GAACTACTTGTTGCTCTACT+GGG | - | chr4.4:23990397-23990416 | MS.gene33801:intron | 40.0% |
| ! | GATCGAGTTTTACAAGAAGG+AGG | - | chr4.4:23991593-23991612 | MS.gene33801:CDS | 40.0% |
| ! | GTACTTTCCAGCAGCTTTAT+TGG | + | chr4.4:23991550-23991569 | None:intergenic | 40.0% |
| ! | TCGAGTTTTACAAGAAGGAG+GGG | - | chr4.4:23991595-23991614 | MS.gene33801:CDS | 40.0% |
| ! | TGGGTTTTCTACGTTGGAAA+AGG | - | chr4.4:23988476-23988495 | MS.gene33801:CDS | 40.0% |
| ! | TTTTCCGTCGATACTTCAGA+CGG | + | chr4.4:23988830-23988849 | None:intergenic | 40.0% |
| !! | TCAGCAAGAAGATTGGTTTG+TGG | - | chr4.4:23989869-23989888 | MS.gene33801:intron | 40.0% |
| !!! | CTCTGCTGCTGTTTTCATAT+GGG | - | chr4.4:23988457-23988476 | MS.gene33801:CDS | 40.0% |
| !!! | TCTCTGCTGCTGTTTTCATA+TGG | - | chr4.4:23988456-23988475 | MS.gene33801:CDS | 40.0% |
| AAAGTGAGCCCTTGCTTTAG+AGG | - | chr4.4:23991132-23991151 | MS.gene33801:intron | 45.0% | |
| AAGTTGCACTGTGACCAATG+TGG | - | chr4.4:23992075-23992094 | MS.gene33801:intron | 45.0% | |
| AATTAAACGGAGTTCGGCCA+AGG | + | chr4.4:23988697-23988716 | None:intergenic | 45.0% | |
| ACACATCCTTCAGGAACATC+TGG | + | chr4.4:23991741-23991760 | None:intergenic | 45.0% | |
| AGATGCAAGACGGACATGAA+AGG | - | chr4.4:23989924-23989943 | MS.gene33801:intron | 45.0% | |
| AGTCAATGAGTGTGCACTGT+GGG | - | chr4.4:23989377-23989396 | MS.gene33801:CDS | 45.0% | |
| ATGCCCAGTAAGTTACCTTC+CGG | - | chr4.4:23989186-23989205 | MS.gene33801:intron | 45.0% | |
| ATTTAGGTGCCCACTTTGGA+AGG | + | chr4.4:23991287-23991306 | None:intergenic | 45.0% | |
| CAAGGCACAGAATGAAGAAG+GGG | - | chr4.4:23990172-23990191 | MS.gene33801:intron | 45.0% | |
| CATATTTGGCAAGCACCATC+AGG | - | chr4.4:23989956-23989975 | MS.gene33801:intron | 45.0% | |
| CGAGACAACTTAACTCCTTC+AGG | + | chr4.4:23990135-23990154 | None:intergenic | 45.0% | |
| CGCACACACATAATTGACGA+TGG | + | chr4.4:23989526-23989545 | None:intergenic | 45.0% | |
| CTATTACACGGATGCCCTAT+AGG | + | chr4.4:23988902-23988921 | None:intergenic | 45.0% | |
| CTCAAGGCACAGAATGAAGA+AGG | - | chr4.4:23990170-23990189 | MS.gene33801:intron | 45.0% | |
| CTGGGAATCAGCAAGAAGAT+TGG | - | chr4.4:23989862-23989881 | MS.gene33801:intron | 45.0% | |
| CTTCTTCATTCTGTGCCTTG+AGG | + | chr4.4:23990172-23990191 | None:intergenic | 45.0% | |
| GAAAAATACCTGAGGGGTTC+TGG | - | chr4.4:23989835-23989854 | MS.gene33801:intron | 45.0% | |
| GAAAGCTGCTCCTTATGTCT+TGG | + | chr4.4:23990908-23990927 | None:intergenic | 45.0% | |
| GACGTTTCAAGCATAGGCAA+TGG | + | chr4.4:23992337-23992356 | None:intergenic | 45.0% | |
| GCTGGTCCCTTGAAGTAAAT+CGG | + | chr4.4:23991827-23991846 | None:intergenic | 45.0% | |
| GGAAGTTTGGCCTCTGTATA+TGG | + | chr4.4:23991627-23991646 | None:intergenic | 45.0% | |
| GGTGTTCACAGAAATACCAC+AGG | - | chr4.4:23992245-23992264 | MS.gene33801:intron | 45.0% | |
| GTGGAGAGACATTGTGTACT+AGG | + | chr4.4:23991013-23991032 | None:intergenic | 45.0% | |
| GTTTCAAGCATAGGCAATGG+AGG | + | chr4.4:23992334-23992353 | None:intergenic | 45.0% | |
| TACTTACCTAGGGAAGTCCT+TGG | - | chr4.4:23989439-23989458 | MS.gene33801:intron | 45.0% | |
| TATACACACGGTTGTCACCA+AGG | + | chr4.4:23989459-23989478 | None:intergenic | 45.0% | |
| TGACAGAGGAATTTGAGCAG+TGG | + | chr4.4:23992302-23992321 | None:intergenic | 45.0% | |
| TGCAGGATTATCAGTAAGGG+CGG | + | chr4.4:23990686-23990705 | None:intergenic | 45.0% | |
| TGGCCGAACTCCGTTTAATT+AGG | - | chr4.4:23988697-23988716 | MS.gene33801:intron | 45.0% | |
| TGGGCTACCATCTTCCTATA+GGG | - | chr4.4:23988885-23988904 | MS.gene33801:intron | 45.0% | |
| TTGGGCTACCATCTTCCTAT+AGG | - | chr4.4:23988884-23988903 | MS.gene33801:intron | 45.0% | |
| TTTGCTGGTCGTAAGAAGGT+TGG | - | chr4.4:23988413-23988432 | MS.gene33801:CDS | 45.0% | |
| ! | AAGTGAGCCCTTGCTTTAGA+GGG | - | chr4.4:23991133-23991152 | MS.gene33801:intron | 45.0% |
| ! | AGGTGCAGAATTTGGTGGTT+CGG | - | chr4.4:23989300-23989319 | MS.gene33801:CDS | 45.0% |
| ! | AGTAGAGGTGCAGAATTTGG+TGG | - | chr4.4:23989295-23989314 | MS.gene33801:CDS | 45.0% |
| ! | GAATTTGGTGGTTCGGAGTT+TGG | - | chr4.4:23989307-23989326 | MS.gene33801:CDS | 45.0% |
| ! | GGAACTACTTGTTGCTCTAC+TGG | - | chr4.4:23990396-23990415 | MS.gene33801:intron | 45.0% |
| ! | TATCTTTTCCACGCCTTCCA+GGG | + | chr4.4:23992396-23992415 | None:intergenic | 45.0% |
| ! | TTATCTTTTCCACGCCTTCC+AGG | + | chr4.4:23992397-23992416 | None:intergenic | 45.0% |
| !! | CAAGTTTGCTGGTCGTAAGA+AGG | - | chr4.4:23988409-23988428 | MS.gene33801:CDS | 45.0% |
| AACATTGCCCTTCCCTTCTC+CGG | - | chr4.4:23989234-23989253 | MS.gene33801:CDS | 50.0% | |
| AAGCATAGGCAATGGAGGTG+GGG | + | chr4.4:23992329-23992348 | None:intergenic | 50.0% | |
| AAGGTTGTAGCTTCACCGGT+TGG | - | chr4.4:23992364-23992383 | MS.gene33801:CDS | 50.0% | |
| ACGGATGCCCTATAGGAAGA+TGG | + | chr4.4:23988895-23988914 | None:intergenic | 50.0% | |
| ATTTGAGCAGTGGTCACTGG+TGG | + | chr4.4:23992292-23992311 | None:intergenic | 50.0% | |
| CAAGCATAGGCAATGGAGGT+GGG | + | chr4.4:23992330-23992349 | None:intergenic | 50.0% | |
| CAATGTTGGCATCCGTGCAA+TGG | + | chr4.4:23989221-23989240 | None:intergenic | 50.0% | |
| CCACCGGAAGGTAACTTACT+GGG | + | chr4.4:23989192-23989211 | None:intergenic | 50.0% | |
| CTCGATCTGGGAGTCAATAG+AGG | + | chr4.4:23991580-23991599 | None:intergenic | 50.0% | |
| GAGTCAATGAGTGTGCACTG+TGG | - | chr4.4:23989376-23989395 | MS.gene33801:CDS | 50.0% | |
| GCAAGACGGACATGAAAGGT+TGG | - | chr4.4:23989928-23989947 | MS.gene33801:intron | 50.0% | |
| GCAGAAGCCAATAAAGCTGC+TGG | - | chr4.4:23991540-23991559 | MS.gene33801:CDS | 50.0% | |
| GGAATTTGAGCAGTGGTCAC+TGG | + | chr4.4:23992295-23992314 | None:intergenic | 50.0% | |
| GGGGTTGACACCATATACAG+AGG | - | chr4.4:23991614-23991633 | MS.gene33801:CDS | 50.0% | |
| GGTGTTCCAGATGTTCCTGA+AGG | - | chr4.4:23991732-23991751 | MS.gene33801:intron | 50.0% | |
| GTCCGTCTTGCATCTGTGTA+AGG | + | chr4.4:23989919-23989938 | None:intergenic | 50.0% | |
| TCAAGCATAGGCAATGGAGG+TGG | + | chr4.4:23992331-23992350 | None:intergenic | 50.0% | |
| TCAGGTGAAGATTCTCGGGA+AGG | - | chr4.4:23988752-23988771 | MS.gene33801:intron | 50.0% | |
| TCCACCGGAAGGTAACTTAC+TGG | + | chr4.4:23989193-23989212 | None:intergenic | 50.0% | |
| TCGGGAGACGTTTCAAGCAT+AGG | + | chr4.4:23992343-23992362 | None:intergenic | 50.0% | |
| TGAAGAACCGGAGAAGGGAA+GGG | + | chr4.4:23989244-23989263 | None:intergenic | 50.0% | |
| TTCCAGCAACAACTTTGCGG+TGG | + | chr4.4:23992438-23992457 | None:intergenic | 50.0% | |
| TTGGCAAGCACCATCAGGAT+TGG | - | chr4.4:23989961-23989980 | MS.gene33801:intron | 50.0% | |
| TTGTCACCAAGGACTTCCCT+AGG | + | chr4.4:23989448-23989467 | None:intergenic | 50.0% | |
| ! | CGGCTGATAAAAAGCGCACT+GGG | - | chr4.4:23988942-23988961 | MS.gene33801:CDS | 50.0% |
| ! | TTTGGTGGTTCGGAGTTTGG+TGG | - | chr4.4:23989310-23989329 | MS.gene33801:CDS | 50.0% |
| !! | CCAGTGCGCTTTTTATCAGC+CGG | + | chr4.4:23988944-23988963 | None:intergenic | 50.0% |
| !! | CTCTCCGTCTGAAGTATCGA+CGG | - | chr4.4:23988823-23988842 | MS.gene33801:intron | 50.0% |
| !! | TGCGCTTTTTATCAGCCGGT+GGG | + | chr4.4:23988940-23988959 | None:intergenic | 50.0% |
| AACAACTTTGCGGTGGCGCT+TGG | + | chr4.4:23992431-23992450 | None:intergenic | 55.0% | |
| AAGGGCGGAGCCATTCACTA+GGG | + | chr4.4:23990671-23990690 | None:intergenic | 55.0% | |
| ACTAAACCTGGCCGCAACAC+AGG | - | chr4.4:23989569-23989588 | MS.gene33801:intron | 55.0% | |
| AGCATAGGCAATGGAGGTGG+GGG | + | chr4.4:23992328-23992347 | None:intergenic | 55.0% | |
| AGCCATTCACTAGGGGTGGA+AGG | + | chr4.4:23990663-23990682 | None:intergenic | 55.0% | |
| CAATGGCTTCTTCCACCGGA+AGG | + | chr4.4:23989204-23989223 | None:intergenic | 55.0% | |
| CAGCAGCAGAGATGAGACAG+AGG | + | chr4.4:23988448-23988467 | None:intergenic | 55.0% | |
| CCATTCACTAGGGGTGGAAG+GGG | + | chr4.4:23990661-23990680 | None:intergenic | 55.0% | |
| CCCAGTAAGTTACCTTCCGG+TGG | - | chr4.4:23989189-23989208 | MS.gene33801:CDS | 55.0% | |
| CGGTGGAAGAAGCCATTGCA+CGG | - | chr4.4:23989206-23989225 | MS.gene33801:CDS | 55.0% | |
| CGTGCAATGGCTTCTTCCAC+CGG | + | chr4.4:23989208-23989227 | None:intergenic | 55.0% | |
| CTGAAGAACCGGAGAAGGGA+AGG | + | chr4.4:23989245-23989264 | None:intergenic | 55.0% | |
| GACGCAGCAGTAAATCCCTG+TGG | + | chr4.4:23992264-23992283 | None:intergenic | 55.0% | |
| GCCATTCACTAGGGGTGGAA+GGG | + | chr4.4:23990662-23990681 | None:intergenic | 55.0% | |
| GGAGAAGGGAAGGGCAATGT+TGG | + | chr4.4:23989235-23989254 | None:intergenic | 55.0% | |
| TAAGGGCGGAGCCATTCACT+AGG | + | chr4.4:23990672-23990691 | None:intergenic | 55.0% | |
| TCAAATCCTGTGTTGCGGCC+AGG | + | chr4.4:23989578-23989597 | None:intergenic | 55.0% | |
| TCAGACGGAGAGTCACTCGT+AGG | + | chr4.4:23988815-23988834 | None:intergenic | 55.0% | |
| TTTCACATTGCCTCCCCCAC+CGG | - | chr4.4:23988922-23988941 | MS.gene33801:CDS | 55.0% | |
| ! | AATACCTGAGGGGTTCTGGC+AGG | - | chr4.4:23989839-23989858 | MS.gene33801:intron | 55.0% |
| ! | CCGGCTGATAAAAAGCGCAC+TGG | - | chr4.4:23988941-23988960 | MS.gene33801:CDS | 55.0% |
| ! | GTAGCTTCACCGGTTGGAAG+AGG | - | chr4.4:23992370-23992389 | MS.gene33801:CDS | 55.0% |
| ! | TAGGTGCCCACTTTGGAAGG+AGG | + | chr4.4:23991284-23991303 | None:intergenic | 55.0% |
| ! | TTGCATTTCGGGACCGACTC+CGG | + | chr4.4:23991326-23991345 | None:intergenic | 55.0% |
| ! | TTTTTATCAGCCGGTGGGGG+AGG | + | chr4.4:23988935-23988954 | None:intergenic | 55.0% |
| !! | CGCTTTTTATCAGCCGGTGG+GGG | + | chr4.4:23988938-23988957 | None:intergenic | 55.0% |
| !! | GCGCTTTTTATCAGCCGGTG+GGG | + | chr4.4:23988939-23988958 | None:intergenic | 55.0% |
| !! | GTGCGCTTTTTATCAGCCGG+TGG | + | chr4.4:23988941-23988960 | None:intergenic | 55.0% |
| AGGGCGGAGCCATTCACTAG+GGG | + | chr4.4:23990670-23990689 | None:intergenic | 60.0% | |
| ATCGCCAAGCACGCGACATG+GGG | + | chr4.4:23990939-23990958 | None:intergenic | 60.0% | |
| CCCCTTCCACCCCTAGTGAA+TGG | - | chr4.4:23990658-23990677 | MS.gene33801:intron | 60.0% | |
| CGCCACCGCAAAGTTGTTGC+TGG | - | chr4.4:23992433-23992452 | MS.gene33801:CDS | 60.0% | |
| CTTCCAGGGCCTCTTCCAAC+CGG | + | chr4.4:23992382-23992401 | None:intergenic | 60.0% | |
| GATCGCCAAGCACGCGACAT+GGG | + | chr4.4:23990940-23990959 | None:intergenic | 60.0% | |
| CGGTTGGAAGAGGCCCTGGA+AGG | - | chr4.4:23992380-23992399 | MS.gene33801:CDS | 65.0% | |
| GCGGAGCCATTCACTAGGGG+TGG | + | chr4.4:23990667-23990686 | None:intergenic | 65.0% | |
| GGAGGTGGGGGAGATGACAG+AGG | + | chr4.4:23992316-23992335 | None:intergenic | 65.0% | |
| GGATCGCCAAGCACGCGACA+TGG | + | chr4.4:23990941-23990960 | None:intergenic | 65.0% | |
| TCGTCCCCATGTCGCGTGCT+TGG | - | chr4.4:23990932-23990951 | MS.gene33801:intron | 65.0% | |
| ! | CTGAGGGGTTCTGGCAGGCT+GGG | - | chr4.4:23989844-23989863 | MS.gene33801:intron | 65.0% |
| ! | TCACCGGTTGGAAGAGGCCC+TGG | - | chr4.4:23992376-23992395 | MS.gene33801:CDS | 65.0% |
| CCAGCCTGCCAGAACCCCTC+AGG | + | chr4.4:23989846-23989865 | None:intergenic | 70.0% | |
| GGAAGAGGCCCTGGAAGGCG+TGG | - | chr4.4:23992385-23992404 | MS.gene33801:CDS | 70.0% | |
| ! | CCTGAGGGGTTCTGGCAGGC+TGG | - | chr4.4:23989843-23989862 | MS.gene33801:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 23988365 | 23992480 | 23988365 | ID=MS.gene33801 |
| chr4.4 | mRNA | 23988365 | 23992480 | 23988365 | ID=MS.gene33801.t1;Parent=MS.gene33801 |
| chr4.4 | exon | 23992348 | 23992480 | 23992348 | ID=MS.gene33801.t1.exon1;Parent=MS.gene33801.t1 |
| chr4.4 | CDS | 23992348 | 23992480 | 23992348 | ID=cds.MS.gene33801.t1;Parent=MS.gene33801.t1 |
| chr4.4 | exon | 23991874 | 23992089 | 23991874 | ID=MS.gene33801.t1.exon2;Parent=MS.gene33801.t1 |
| chr4.4 | CDS | 23991874 | 23992089 | 23991874 | ID=cds.MS.gene33801.t1;Parent=MS.gene33801.t1 |
| chr4.4 | exon | 23991447 | 23991660 | 23991447 | ID=MS.gene33801.t1.exon3;Parent=MS.gene33801.t1 |
| chr4.4 | CDS | 23991447 | 23991660 | 23991447 | ID=cds.MS.gene33801.t1;Parent=MS.gene33801.t1 |
| chr4.4 | exon | 23991180 | 23991289 | 23991180 | ID=MS.gene33801.t1.exon4;Parent=MS.gene33801.t1 |
| chr4.4 | CDS | 23991180 | 23991289 | 23991180 | ID=cds.MS.gene33801.t1;Parent=MS.gene33801.t1 |
| chr4.4 | exon | 23990945 | 23991099 | 23990945 | ID=MS.gene33801.t1.exon5;Parent=MS.gene33801.t1 |
| chr4.4 | CDS | 23990945 | 23991099 | 23990945 | ID=cds.MS.gene33801.t1;Parent=MS.gene33801.t1 |
| chr4.4 | exon | 23990478 | 23990535 | 23990478 | ID=MS.gene33801.t1.exon6;Parent=MS.gene33801.t1 |
| chr4.4 | CDS | 23990478 | 23990535 | 23990478 | ID=cds.MS.gene33801.t1;Parent=MS.gene33801.t1 |
| chr4.4 | exon | 23989188 | 23989448 | 23989188 | ID=MS.gene33801.t1.exon7;Parent=MS.gene33801.t1 |
| chr4.4 | CDS | 23989188 | 23989448 | 23989188 | ID=cds.MS.gene33801.t1;Parent=MS.gene33801.t1 |
| chr4.4 | exon | 23988904 | 23989103 | 23988904 | ID=MS.gene33801.t1.exon8;Parent=MS.gene33801.t1 |
| chr4.4 | CDS | 23988904 | 23989103 | 23988904 | ID=cds.MS.gene33801.t1;Parent=MS.gene33801.t1 |
| chr4.4 | exon | 23988365 | 23988589 | 23988365 | ID=MS.gene33801.t1.exon9;Parent=MS.gene33801.t1 |
| chr4.4 | CDS | 23988365 | 23988589 | 23988365 | ID=cds.MS.gene33801.t1;Parent=MS.gene33801.t1 |
| Gene Sequence |
| Protein sequence |
