Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34054.t1 | RHN81479.1 | 98.9 | 544 | 6 | 0 | 1 | 544 | 1 | 544 | 2.2e-310 | 1073.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34054.t1 | Q7XA06 | 63.8 | 544 | 187 | 3 | 1 | 541 | 1 | 537 | 1.1e-204 | 714.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34054.t1 | A0A396JT26 | 98.9 | 544 | 6 | 0 | 1 | 544 | 1 | 544 | 1.6e-310 | 1073.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene34054 | MS.gene89310 | PPI |
| MS.gene34054 | MS.gene44760 | PPI |
| MS.gene34054 | MS.gene85425 | PPI |
| MS.gene34054 | MS.gene75993 | PPI |
| MS.gene058512 | MS.gene34054 | PPI |
| MS.gene34054 | MS.gene85428 | PPI |
| MS.gene62006 | MS.gene34054 | PPI |
| MS.gene34054 | MS.gene023945 | PPI |
| MS.gene34054 | MS.gene022022 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34054.t1 | MTR_1g094810 | 96.324 | 544 | 5 | 1 | 1 | 544 | 1 | 529 | 0.0 | 1059 |
| MS.gene34054.t1 | MTR_4g073400 | 55.388 | 529 | 227 | 3 | 17 | 544 | 17 | 537 | 0.0 | 610 |
| MS.gene34054.t1 | MTR_1g025550 | 53.028 | 545 | 243 | 4 | 1 | 543 | 1 | 534 | 0.0 | 595 |
| MS.gene34054.t1 | MTR_4g115660 | 30.309 | 518 | 321 | 14 | 53 | 541 | 51 | 557 | 1.82e-73 | 244 |
| MS.gene34054.t1 | MTR_7g075790 | 32.068 | 474 | 287 | 14 | 3 | 453 | 4 | 465 | 8.26e-66 | 222 |
| MS.gene34054.t1 | MTR_3g106660 | 27.290 | 513 | 326 | 14 | 60 | 541 | 60 | 556 | 4.51e-62 | 214 |
| MS.gene34054.t1 | MTR_8g035590 | 31.671 | 401 | 252 | 11 | 11 | 395 | 1 | 395 | 4.44e-57 | 199 |
| MS.gene34054.t1 | MTR_4g073510 | 44.776 | 134 | 61 | 3 | 327 | 459 | 193 | 314 | 2.17e-22 | 100 |
| MS.gene34054.t1 | MTR_7g080570 | 41.803 | 122 | 67 | 4 | 422 | 540 | 43 | 163 | 1.91e-20 | 89.0 |
| MS.gene34054.t1 | MTR_2g072180 | 23.288 | 292 | 195 | 10 | 67 | 335 | 72 | 357 | 3.98e-14 | 75.9 |
| MS.gene34054.t1 | MTR_8g032320 | 31.410 | 156 | 97 | 3 | 259 | 414 | 2 | 147 | 1.22e-13 | 68.9 |
| MS.gene34054.t1 | MTR_8g032300 | 30.573 | 157 | 97 | 4 | 259 | 414 | 2 | 147 | 4.48e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34054.t1 | AT5G04220 | 64.771 | 545 | 180 | 4 | 1 | 541 | 1 | 537 | 0.0 | 702 |
| MS.gene34054.t1 | AT5G04220 | 66.667 | 483 | 149 | 4 | 63 | 541 | 1 | 475 | 0.0 | 651 |
| MS.gene34054.t1 | AT2G20990 | 52.920 | 548 | 246 | 5 | 1 | 544 | 1 | 540 | 0.0 | 607 |
| MS.gene34054.t1 | AT1G20080 | 51.381 | 543 | 254 | 4 | 1 | 542 | 1 | 534 | 0.0 | 595 |
| MS.gene34054.t1 | AT1G20080 | 51.381 | 543 | 254 | 4 | 1 | 542 | 1 | 534 | 0.0 | 595 |
| MS.gene34054.t1 | AT1G20080 | 51.381 | 543 | 254 | 4 | 1 | 542 | 1 | 534 | 0.0 | 595 |
| MS.gene34054.t1 | AT1G20080 | 51.381 | 543 | 254 | 4 | 1 | 542 | 1 | 534 | 0.0 | 595 |
| MS.gene34054.t1 | AT1G20080 | 51.381 | 543 | 254 | 4 | 1 | 542 | 1 | 534 | 0.0 | 595 |
| MS.gene34054.t1 | AT2G20990 | 50.699 | 572 | 246 | 6 | 1 | 544 | 1 | 564 | 0.0 | 593 |
| MS.gene34054.t1 | AT2G20990 | 49.488 | 586 | 246 | 6 | 1 | 544 | 1 | 578 | 0.0 | 590 |
| MS.gene34054.t1 | AT5G04220 | 65.109 | 321 | 100 | 4 | 225 | 541 | 3 | 315 | 5.04e-140 | 407 |
| MS.gene34054.t1 | AT1G05500 | 29.401 | 568 | 347 | 16 | 11 | 541 | 1 | 551 | 3.25e-77 | 254 |
| MS.gene34054.t1 | AT2G21010 | 45.725 | 269 | 129 | 5 | 279 | 544 | 1 | 255 | 3.52e-77 | 244 |
| MS.gene34054.t1 | AT3G61050 | 33.005 | 406 | 249 | 12 | 1 | 395 | 1 | 394 | 2.24e-58 | 202 |
| MS.gene34054.t1 | AT3G61050 | 33.005 | 406 | 249 | 12 | 1 | 395 | 1 | 394 | 2.24e-58 | 202 |
| MS.gene34054.t1 | AT1G05500 | 31.678 | 423 | 246 | 12 | 146 | 541 | 1 | 407 | 4.70e-56 | 194 |
| MS.gene34054.t1 | AT3G60950 | 27.961 | 304 | 160 | 10 | 71 | 367 | 39 | 290 | 1.64e-24 | 108 |
| MS.gene34054.t1 | AT3G61030 | 27.632 | 304 | 154 | 9 | 71 | 367 | 39 | 283 | 6.39e-23 | 102 |
| MS.gene34054.t1 | AT2G21040 | 50.649 | 77 | 37 | 1 | 425 | 500 | 15 | 91 | 1.56e-20 | 92.0 |
| MS.gene34054.t1 | AT1G50260 | 26.129 | 310 | 201 | 10 | 69 | 354 | 190 | 495 | 5.58e-15 | 78.6 |
| MS.gene34054.t1 | AT1G53590 | 24.149 | 323 | 214 | 10 | 67 | 365 | 68 | 383 | 3.94e-12 | 69.7 |
| MS.gene34054.t1 | AT1G70810 | 36.957 | 92 | 53 | 3 | 260 | 351 | 5 | 91 | 6.66e-11 | 61.6 |
| MS.gene34054.t1 | AT5G47710 | 38.542 | 96 | 54 | 3 | 258 | 353 | 3 | 93 | 6.93e-11 | 61.6 |
| MS.gene34054.t1 | AT5G47710 | 38.542 | 96 | 54 | 3 | 258 | 353 | 3 | 93 | 6.93e-11 | 61.6 |
| MS.gene34054.t1 | AT5G47710 | 38.542 | 96 | 54 | 3 | 258 | 353 | 3 | 93 | 6.93e-11 | 61.6 |
| MS.gene34054.t1 | AT5G47710 | 38.542 | 96 | 54 | 3 | 258 | 353 | 3 | 93 | 6.93e-11 | 61.6 |
| MS.gene34054.t1 | AT1G70800 | 37.624 | 101 | 58 | 4 | 251 | 351 | 5 | 100 | 7.03e-11 | 61.6 |
| MS.gene34054.t1 | AT1G70790 | 41.379 | 87 | 46 | 3 | 258 | 344 | 4 | 85 | 8.17e-11 | 61.6 |
| MS.gene34054.t1 | AT1G70790 | 41.379 | 87 | 46 | 3 | 258 | 344 | 4 | 85 | 8.17e-11 | 61.6 |
| MS.gene34054.t1 | AT1G70790 | 41.379 | 87 | 46 | 3 | 258 | 344 | 4 | 85 | 8.17e-11 | 61.6 |
Find 142 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTACAGCCTCATGTGGATTT+TGG | 0.161713 | 1.2:-73517748 | MS.gene34054:intron |
| TGCCCTCTAAACTTCTTATT+TGG | 0.168636 | 1.2:+73515938 | None:intergenic |
| ATTCCTCTTGGTCTTCTTCT+TGG | 0.184387 | 1.2:-73519428 | MS.gene34054:CDS |
| CCAATATTTGATGAATATAT+TGG | 0.236728 | 1.2:-73518837 | MS.gene34054:CDS |
| CCCAATCATAGACTTGTAAT+TGG | 0.238477 | 1.2:+73516673 | None:intergenic |
| CCAATATATTCATCAAATAT+TGG | 0.250135 | 1.2:+73518837 | None:intergenic |
| GTTAGACCAATTAGTGAATT+AGG | 0.267667 | 1.2:-73519183 | MS.gene34054:CDS |
| ATTTGATATGTGGCCTTTCT+TGG | 0.280149 | 1.2:-73518982 | MS.gene34054:CDS |
| TTCTGCAGGTATGAAAGTTT+TGG | 0.282874 | 1.2:-73518166 | MS.gene34054:intron |
| AAAGCAAACCCGCTCCTTCT+TGG | 0.286531 | 1.2:+73515798 | None:intergenic |
| TGCAAGGTCAATACTATGTT+TGG | 0.291324 | 1.2:+73518090 | None:intergenic |
| TTTGCAGTGATCACCTTTAG+AGG | 0.302647 | 1.2:-73515725 | MS.gene34054:CDS |
| TAATTCATGTTGAGATAAAA+TGG | 0.314770 | 1.2:-73514866 | MS.gene34054:CDS |
| TCCAATTACAAGTCTATGAT+TGG | 0.315176 | 1.2:-73516674 | MS.gene34054:CDS |
| GGGGTTCTTTGAAAGTTTCT+TGG | 0.325108 | 1.2:-73519474 | MS.gene34054:CDS |
| CATTCCTTGAATTTATTAGA+TGG | 0.332392 | 1.2:+73514892 | None:intergenic |
| AGTGGGCCTAATTCACTAAT+TGG | 0.335206 | 1.2:+73519177 | None:intergenic |
| TTATCTTTGGCCTCAGATCT+TGG | 0.336761 | 1.2:-73517361 | MS.gene34054:CDS |
| TTCACCCAGAGAGGAATTTC+AGG | 0.340892 | 1.2:+73519135 | None:intergenic |
| GGAAACAAATGAAAAGGAAT+TGG | 0.343840 | 1.2:-73518145 | MS.gene34054:CDS |
| AAGTTGCAAACCTTTATCTT+TGG | 0.347676 | 1.2:-73517374 | MS.gene34054:CDS |
| TACGGCTTAAGCAGCTTTAG+AGG | 0.359782 | 1.2:+73516016 | None:intergenic |
| AAACTAACTCTTTCGTAATC+AGG | 0.363663 | 1.2:+73519108 | None:intergenic |
| AGAAGGAGCGGGTTTGCTTT+CGG | 0.368737 | 1.2:-73515795 | MS.gene34054:CDS |
| ACGTTGATTCATCAAGAATA+GGG | 0.369250 | 1.2:+73517334 | None:intergenic |
| TGGTCTTTATAGATTTGTTC+AGG | 0.370982 | 1.2:-73517689 | MS.gene34054:intron |
| CAAATTCCTCCTCTTGATAG+TGG | 0.371588 | 1.2:+73516755 | None:intergenic |
| TATTACATGTGAATGTGGTT+AGG | 0.379262 | 1.2:-73516869 | MS.gene34054:CDS |
| GCGGATAAGTTTAAGACCTT+TGG | 0.382540 | 1.2:-73517926 | MS.gene34054:CDS |
| AGATCTGAGGCCAAAGATAA+AGG | 0.387195 | 1.2:+73517364 | None:intergenic |
| AGCGGGTTTGCTTTCGGTTG+TGG | 0.387500 | 1.2:-73515789 | MS.gene34054:CDS |
| TTTGCTTTCGGTTGTGGTAC+AGG | 0.389101 | 1.2:-73515783 | MS.gene34054:CDS |
| GGGTTCTTTGAAAGTTTCTT+GGG | 0.389257 | 1.2:-73519473 | MS.gene34054:CDS |
| GTCTATGAAGATCAAAGTTC+AGG | 0.394021 | 1.2:-73518061 | MS.gene34054:intron |
| TACGTTGATTCATCAAGAAT+AGG | 0.403364 | 1.2:+73517333 | None:intergenic |
| ATTTACACTTGATTTGCTTA+AGG | 0.404829 | 1.2:-73515981 | MS.gene34054:CDS |
| TTTGCTATTGGAATTCCTCT+TGG | 0.405196 | 1.2:-73519440 | MS.gene34054:CDS |
| GAGGCTCCTCTAGCATAAAC+TGG | 0.415645 | 1.2:+73515435 | None:intergenic |
| GATCGACTTACCACAAATAG+TGG | 0.416324 | 1.2:+73518758 | None:intergenic |
| TATGTCAAACTGAGCCTGAC+TGG | 0.419431 | 1.2:-73516801 | MS.gene34054:CDS |
| ACTCCAAATAAGAAGTTTAG+AGG | 0.424971 | 1.2:-73515941 | MS.gene34054:CDS |
| GCATGTTTCATCAGGTTGAT+TGG | 0.427787 | 1.2:-73519019 | MS.gene34054:intron |
| TCATGGAACAAGTCATCAAA+TGG | 0.428179 | 1.2:-73518122 | MS.gene34054:CDS |
| AAAGGTTGTGGTGTCTTTGA+TGG | 0.436285 | 1.2:-73517881 | MS.gene34054:CDS |
| GCAAGGTCAATACTATGTTT+GGG | 0.443699 | 1.2:+73518091 | None:intergenic |
| TTCATACTATCTTCTCTGAA+TGG | 0.445049 | 1.2:+73515890 | None:intergenic |
| TTATGCCTGAAATTCCTCTC+TGG | 0.446224 | 1.2:-73519140 | MS.gene34054:CDS |
| ACTCTTCCTCCCACTATTTG+TGG | 0.446962 | 1.2:-73518768 | MS.gene34054:intron |
| TCACTAATTGGTCTAACAAC+AGG | 0.448248 | 1.2:+73519189 | None:intergenic |
| TAACAAAATGCAGGAATCCC+TGG | 0.449558 | 1.2:-73514973 | MS.gene34054:intron |
| GTCAGGCTCAGTTTGACATA+TGG | 0.457579 | 1.2:+73516804 | None:intergenic |
| GTAAATTCTTTATTCTCGTA+CGG | 0.461838 | 1.2:+73515998 | None:intergenic |
| TTCATTCCAACGTGGTTGAC+GGG | 0.462970 | 1.2:+73515463 | None:intergenic |
| CTGGAAGTTTGTCCCCAGTC+AGG | 0.464687 | 1.2:+73516787 | None:intergenic |
| AGAGAAGATAGTATGAAATT+CGG | 0.467927 | 1.2:-73515884 | MS.gene34054:CDS |
| CTTCATTCCAACGTGGTTGA+CGG | 0.468702 | 1.2:+73515462 | None:intergenic |
| AACAAAATGCAGGAATCCCT+GGG | 0.473300 | 1.2:-73514972 | MS.gene34054:intron |
| CTGAGTGATGTGGTGCATAA+TGG | 0.477183 | 1.2:-73514933 | MS.gene34054:CDS |
| AGTACCATCTAATAAATTCA+AGG | 0.478035 | 1.2:-73514896 | MS.gene34054:CDS |
| ATTACATGTGAATGTGGTTA+GGG | 0.483908 | 1.2:-73516868 | MS.gene34054:CDS |
| CCAATTACAAGTCTATGATT+GGG | 0.487047 | 1.2:-73516673 | MS.gene34054:CDS |
| GGATATGTCAGAAAGGATAG+TGG | 0.491916 | 1.2:-73515848 | MS.gene34054:CDS |
| AATTGGAGAACTTGAGATTG+AGG | 0.492351 | 1.2:+73516690 | None:intergenic |
| TTGAATTTCTCATTCCATTG+AGG | 0.492601 | 1.2:+73516729 | None:intergenic |
| CCTTTAGAGGCGAAAAGAAA+AGG | 0.501075 | 1.2:-73515712 | MS.gene34054:CDS |
| TCAAGTACCTTCTCCAAGAA+AGG | 0.503469 | 1.2:+73518969 | None:intergenic |
| TTTGGGTTGGCGATATCTGG+AGG | 0.509662 | 1.2:-73517730 | MS.gene34054:CDS |
| CTAAAGGTGATCACTGCAAA+GGG | 0.513629 | 1.2:+73515728 | None:intergenic |
| ACCACAACCTTTGCAAAACA+TGG | 0.513949 | 1.2:+73517892 | None:intergenic |
| GATTAATCTCCACATGCCCC+AGG | 0.514352 | 1.2:+73514955 | None:intergenic |
| GAAATTCAAGATTGTTGTGA+AGG | 0.518827 | 1.2:-73516715 | MS.gene34054:CDS |
| GGTTGGTGCACATGACAAGC+TGG | 0.526836 | 1.2:-73516053 | MS.gene34054:CDS |
| CATCTAATAAATTCAAGGAA+TGG | 0.529092 | 1.2:-73514891 | MS.gene34054:CDS |
| GAGTTTGATCAATTGAGTCT+TGG | 0.529640 | 1.2:-73518792 | MS.gene34054:CDS |
| GAACAAGTCATCAAATGGGC+TGG | 0.529916 | 1.2:-73518117 | MS.gene34054:CDS |
| ATGTCAAACTGAGCCTGACT+GGG | 0.530491 | 1.2:-73516800 | MS.gene34054:CDS |
| TTCTGAATCAAAGCAAGTCA+AGG | 0.530603 | 1.2:-73519387 | MS.gene34054:intron |
| ATTGGAGAACTTGAGATTGA+GGG | 0.531440 | 1.2:+73516691 | None:intergenic |
| TATGCCTGAAATTCCTCTCT+GGG | 0.532945 | 1.2:-73519139 | MS.gene34054:CDS |
| TATGTGGCCTTTCTTGGAGA+AGG | 0.533642 | 1.2:-73518976 | MS.gene34054:intron |
| GGAGGAATTTGAATCCTCAA+TGG | 0.534114 | 1.2:-73516743 | MS.gene34054:CDS |
| TTGGGTTGGCGATATCTGGA+GGG | 0.536736 | 1.2:-73517729 | MS.gene34054:CDS |
| TATTGGAAAGTATCAGATCA+AGG | 0.540715 | 1.2:-73518820 | MS.gene34054:CDS |
| AAATGAAAAGGAATTGGTCA+TGG | 0.544170 | 1.2:-73518139 | MS.gene34054:CDS |
| GCAGGAATCCCTGGGGCATG+TGG | 0.544730 | 1.2:-73514964 | MS.gene34054:intron |
| ACAGGAGGCTGACGAAGTTG+AGG | 0.550573 | 1.2:-73515765 | MS.gene34054:CDS |
| TTCACATGTAATATTCCCAC+TGG | 0.557080 | 1.2:+73516879 | None:intergenic |
| TGTTGAGATAAAATGGAAGG+TGG | 0.558509 | 1.2:-73514859 | MS.gene34054:CDS |
| AAACCAAGAAGAAGACCAAG+AGG | 0.560579 | 1.2:+73519425 | None:intergenic |
| CATGGAACAAGTCATCAAAT+GGG | 0.569785 | 1.2:-73518121 | MS.gene34054:CDS |
| TTTGTGTACAGGCAATTTGT+GGG | 0.575356 | 1.2:-73518881 | MS.gene34054:intron |
| TGTGGTGTCTTTGATGGAGA+AGG | 0.577038 | 1.2:-73517875 | MS.gene34054:intron |
| ACGGCTTAAGCAGCTTTAGA+GGG | 0.581907 | 1.2:+73516017 | None:intergenic |
| CAGGAGGCTGACGAAGTTGA+GGG | 0.583761 | 1.2:-73515764 | MS.gene34054:CDS |
| GATGAGGTCCAAGAAGGAGC+GGG | 0.586490 | 1.2:-73515806 | MS.gene34054:CDS |
| GTTCAATGTACAGCCTCATG+TGG | 0.586957 | 1.2:-73517755 | MS.gene34054:intron |
| CTCCAAATAAGAAGTTTAGA+GGG | 0.589712 | 1.2:-73515940 | MS.gene34054:CDS |
| ATGTGTATCTTCTCATGTAG+AGG | 0.590209 | 1.2:+73515413 | None:intergenic |
| AGAATTCCAGTTTATGCTAG+AGG | 0.594294 | 1.2:-73515441 | MS.gene34054:CDS |
| TTCAGAAGGATATGTCAGAA+AGG | 0.595674 | 1.2:-73515855 | MS.gene34054:CDS |
| GGGGACATCATGTCAATACC+TGG | 0.598945 | 1.2:-73517709 | MS.gene34054:CDS |
| TCTAAAGGTGATCACTGCAA+AGG | 0.603963 | 1.2:+73515727 | None:intergenic |
| GTTTAGAGGGCAAATTGTGG+TGG | 0.604850 | 1.2:-73515927 | MS.gene34054:CDS |
| TCATGTTGAGATAAAATGGA+AGG | 0.606731 | 1.2:-73514862 | MS.gene34054:CDS |
| GAAGATAGTATGAAATTCGG+TGG | 0.610289 | 1.2:-73515881 | MS.gene34054:CDS |
| TGTATCTTCTCATGTAGAGG+AGG | 0.615556 | 1.2:+73515416 | None:intergenic |
| GATGGTACTTGTCGTTAATG+CGG | 0.616891 | 1.2:+73514910 | None:intergenic |
| GTTGGTGCACATGACAAGCT+GGG | 0.617725 | 1.2:-73516052 | MS.gene34054:CDS |
| GCTTTCGGTTGTGGTACAGG+AGG | 0.618012 | 1.2:-73515780 | MS.gene34054:CDS |
| TCTGATGATGAGGTCCAAGA+AGG | 0.618375 | 1.2:-73515812 | MS.gene34054:CDS |
| AAATTCGGTGGATCTTCAGA+AGG | 0.618590 | 1.2:-73515869 | MS.gene34054:CDS |
| ATCTTCTCTGAATGGAACAA+AGG | 0.620019 | 1.2:+73515898 | None:intergenic |
| ACATTGAGGTCATGAGCAAG+AGG | 0.623223 | 1.2:-73515394 | MS.gene34054:CDS |
| GGGAATATTACATGTGAATG+TGG | 0.627036 | 1.2:-73516874 | MS.gene34054:CDS |
| ATAAGTTCTTGCAAAGCAAG+TGG | 0.630851 | 1.2:+73519159 | None:intergenic |
| ATCGACTTACCACAAATAGT+GGG | 0.631225 | 1.2:+73518759 | None:intergenic |
| CGAAGAAAACCACTATCAAG+AGG | 0.635234 | 1.2:-73516764 | MS.gene34054:CDS |
| ACATGAGAAGATACACATTG+AGG | 0.638470 | 1.2:-73515408 | MS.gene34054:CDS |
| ACAAGTCTATGATTGGGACA+AGG | 0.641670 | 1.2:-73516667 | MS.gene34054:intron |
| GAAGTTTAGAGGGCAAATTG+TGG | 0.644875 | 1.2:-73515930 | MS.gene34054:CDS |
| AGAAAACCCGTCAACCACGT+TGG | 0.649974 | 1.2:-73515469 | MS.gene34054:CDS |
| TCAGGTGTCTTCACCCAGAG+AGG | 0.650472 | 1.2:+73519126 | None:intergenic |
| ATTAATCTCCACATGCCCCA+GGG | 0.650883 | 1.2:+73514956 | None:intergenic |
| TAAGTTCTTGCAAAGCAAGT+GGG | 0.651983 | 1.2:+73519160 | None:intergenic |
| TGATGAGGTCCAAGAAGGAG+CGG | 0.653990 | 1.2:-73515807 | MS.gene34054:CDS |
| TGGGTTGGCGATATCTGGAG+GGG | 0.654158 | 1.2:-73517728 | MS.gene34054:CDS |
| CTTCATAGACAACACATGCA+AGG | 0.656238 | 1.2:+73518074 | None:intergenic |
| ATAGGGATTTCCAAGATCTG+AGG | 0.659945 | 1.2:+73517351 | None:intergenic |
| AGGCGAAAAGAAAAGGACAA+AGG | 0.660070 | 1.2:-73515705 | MS.gene34054:intron |
| GGTAGCAATAAAGAAGCCAG+TGG | 0.667479 | 1.2:-73516895 | MS.gene34054:CDS |
| TGATAGTGTATCTGATGATG+AGG | 0.667621 | 1.2:-73515822 | MS.gene34054:CDS |
| AGAAAACCACTATCAAGAGG+AGG | 0.672004 | 1.2:-73516761 | MS.gene34054:CDS |
| GCCAACCCAAAATCCACATG+AGG | 0.676621 | 1.2:+73517742 | None:intergenic |
| CATGGAAGTGTAGACACCAA+AGG | 0.678495 | 1.2:+73517910 | None:intergenic |
| GACTTACCACAAATAGTGGG+AGG | 0.682265 | 1.2:+73518762 | None:intergenic |
| GTAGCAATAAAGAAGCCAGT+GGG | 0.689579 | 1.2:-73516894 | MS.gene34054:CDS |
| TGAACAAATCTATAAAGACC+AGG | 0.696952 | 1.2:+73517691 | None:intergenic |
| AAAGGTCTTAAACTTATCCG+CGG | 0.705412 | 1.2:+73517928 | None:intergenic |
| TGTCAAACTGAGCCTGACTG+GGG | 0.720631 | 1.2:-73516799 | MS.gene34054:CDS |
| GGAGATTAATCTGAGTGATG+TGG | 0.736278 | 1.2:-73514943 | MS.gene34054:CDS |
| TGGAATTCTTCATTCCAACG+TGG | 0.738872 | 1.2:+73515455 | None:intergenic |
| ACAAAATGCAGGAATCCCTG+GGG | 0.759341 | 1.2:-73514971 | MS.gene34054:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTTTAATTGTGATA+GGG | + | chr1.2:73519249-73519268 | None:intergenic | 10.0% |
| !! | AAAATCAAAATCAATATTAG+AGG | + | chr1.2:73516349-73516368 | None:intergenic | 15.0% |
| !! | ATTAGATGATTATTGTTTAA+TGG | - | chr1.2:73515416-73515435 | MS.gene34054:CDS | 15.0% |
| !! | CAAATTAAATAATACTAACT+TGG | + | chr1.2:73518797-73518816 | None:intergenic | 15.0% |
| !! | GTTAAATAGTAAAATAATTC+AGG | + | chr1.2:73517264-73517283 | None:intergenic | 15.0% |
| !! | TAAATATGTGAAGAAAAATA+AGG | + | chr1.2:73517412-73517431 | None:intergenic | 15.0% |
| !! | TATACGCAAAATAATTATTA+GGG | + | chr1.2:73517183-73517202 | None:intergenic | 15.0% |
| !! | TTATAAAATTGGAATCTTTA+TGG | - | chr1.2:73517903-73517922 | MS.gene34054:CDS | 15.0% |
| !! | TTATACGCAAAATAATTATT+AGG | + | chr1.2:73517184-73517203 | None:intergenic | 15.0% |
| !!! | AATTCATATATGTTCATTTT+AGG | + | chr1.2:73515750-73515769 | None:intergenic | 15.0% |
| !!! | ATTTTTCTTCACATATTTAT+AGG | - | chr1.2:73517413-73517432 | MS.gene34054:intron | 15.0% |
| !!! | GAATTTTTTTTAATTGTGAT+AGG | + | chr1.2:73519250-73519269 | None:intergenic | 15.0% |
| !!! | TAGTTGGTTTTTTATTTTTA+AGG | - | chr1.2:73518064-73518083 | MS.gene34054:CDS | 15.0% |
| !!! | TCAAACTTTGTTTATAAAAT+TGG | - | chr1.2:73517892-73517911 | MS.gene34054:CDS | 15.0% |
| !!! | TTGCTTGAAAAAATTTATTT+TGG | - | chr1.2:73518814-73518833 | MS.gene34054:CDS | 15.0% |
| !!! | TTTTTCTTCACATATTTATA+GGG | - | chr1.2:73517414-73517433 | MS.gene34054:intron | 15.0% |
| !! | AAAACTGATAAAAACAAATG+TGG | + | chr1.2:73515024-73515043 | None:intergenic | 20.0% |
| !! | AAACAAAGTTTGAAAATAAG+TGG | + | chr1.2:73517885-73517904 | None:intergenic | 20.0% |
| !! | AAACTGATAAAAACAAATGT+GGG | + | chr1.2:73515023-73515042 | None:intergenic | 20.0% |
| !! | AAAGTTTCAAGAAATCTATT+AGG | + | chr1.2:73519034-73519053 | None:intergenic | 20.0% |
| !! | AAGTATATCGATATTTGATA+AGG | + | chr1.2:73516043-73516062 | None:intergenic | 20.0% |
| !! | AATTATTTATCAGATGAGAA+GGG | + | chr1.2:73516553-73516572 | None:intergenic | 20.0% |
| !! | AGTATATCGATATTTGATAA+GGG | + | chr1.2:73516042-73516061 | None:intergenic | 20.0% |
| !! | ATACGCAAAATAATTATTAG+GGG | + | chr1.2:73517182-73517201 | None:intergenic | 20.0% |
| !! | ATAGATTTCTTGAAACTTTA+AGG | - | chr1.2:73519035-73519054 | MS.gene34054:intron | 20.0% |
| !! | ATTCAAATATGACAATCTTA+AGG | + | chr1.2:73517806-73517825 | None:intergenic | 20.0% |
| !! | CCAATATATTCATCAAATAT+TGG | + | chr1.2:73515496-73515515 | None:intergenic | 20.0% |
| !! | CCAATATTTGATGAATATAT+TGG | - | chr1.2:73515493-73515512 | MS.gene34054:intron | 20.0% |
| !! | GTTAAATGAAATTTACAACT+AGG | + | chr1.2:73516712-73516731 | None:intergenic | 20.0% |
| !! | TAATGAAGAGAAAAATGAAA+TGG | + | chr1.2:73518989-73519008 | None:intergenic | 20.0% |
| !! | TAATTATTTATCAGATGAGA+AGG | + | chr1.2:73516554-73516573 | None:intergenic | 20.0% |
| !! | TAATTCATGTTGAGATAAAA+TGG | - | chr1.2:73519464-73519483 | MS.gene34054:CDS | 20.0% |
| !! | TAGATTTCTTGAAACTTTAA+GGG | - | chr1.2:73519036-73519055 | MS.gene34054:intron | 20.0% |
| !! | TATGAATTGAATGAAATTAC+TGG | - | chr1.2:73515762-73515781 | MS.gene34054:CDS | 20.0% |
| !! | TTAAGATTGTCATATTTGAA+TGG | - | chr1.2:73517805-73517824 | MS.gene34054:intron | 20.0% |
| !! | TTCAAATATGACAATCTTAA+GGG | + | chr1.2:73517805-73517824 | None:intergenic | 20.0% |
| !!! | AACCATACAATATTTTCAAA+CGG | - | chr1.2:73517988-73518007 | MS.gene34054:intron | 20.0% |
| !!! | ACAAGTTTTTATTTGATATG+TGG | - | chr1.2:73515338-73515357 | MS.gene34054:intron | 20.0% |
| !!! | ACAATTTTTGGAATCATAAT+TGG | + | chr1.2:73519277-73519296 | None:intergenic | 20.0% |
| !!! | ATTTATTTTACGTCTAGATT+GGG | + | chr1.2:73515916-73515935 | None:intergenic | 20.0% |
| !!! | TATGTTGACTTATCTAAATA+AGG | + | chr1.2:73517147-73517166 | None:intergenic | 20.0% |
| !!! | TATTTTCTAATTTTCTGTGA+GGG | + | chr1.2:73516308-73516327 | None:intergenic | 20.0% |
| !!! | TTATTTTCTAATTTTCTGTG+AGG | + | chr1.2:73516309-73516328 | None:intergenic | 20.0% |
| !!! | TTTTACAAATAACATATGCA+AGG | - | chr1.2:73517110-73517129 | MS.gene34054:intron | 20.0% |
| !!! | TTTTATGTAGTGACAAAAAT+TGG | + | chr1.2:73518713-73518732 | None:intergenic | 20.0% |
| ! | ACAGAGATGAAAAATAAGAT+TGG | + | chr1.2:73518222-73518241 | None:intergenic | 25.0% |
| ! | ACTGAATATTAAATGTGCAT+AGG | + | chr1.2:73516814-73516833 | None:intergenic | 25.0% |
| ! | AGAGAAGATAGTATGAAATT+CGG | - | chr1.2:73518446-73518465 | MS.gene34054:intron | 25.0% |
| ! | AGTACCATCTAATAAATTCA+AGG | - | chr1.2:73519434-73519453 | MS.gene34054:CDS | 25.0% |
| ! | CATATCATCAATGAATCAAA+TGG | + | chr1.2:73518245-73518264 | None:intergenic | 25.0% |
| ! | CATCTAATAAATTCAAGGAA+TGG | - | chr1.2:73519439-73519458 | MS.gene34054:CDS | 25.0% |
| ! | CATTCCTTGAATTTATTAGA+TGG | + | chr1.2:73519441-73519460 | None:intergenic | 25.0% |
| ! | GCAAATTGACATTATATTTG+TGG | - | chr1.2:73515805-73515824 | MS.gene34054:CDS | 25.0% |
| ! | GTAAATTCTTTATTCTCGTA+CGG | + | chr1.2:73518335-73518354 | None:intergenic | 25.0% |
| ! | TTCAATCAAATATGAATCCT+TGG | - | chr1.2:73515958-73515977 | MS.gene34054:CDS | 25.0% |
| ! | TTCCGTTTGAAAATATTGTA+TGG | + | chr1.2:73517993-73518012 | None:intergenic | 25.0% |
| ! | TTTAATATTCAGTTCGTTGA+TGG | - | chr1.2:73516821-73516840 | MS.gene34054:CDS | 25.0% |
| ! | TTTCTTCTAATTTCACTTCT+CGG | - | chr1.2:73516494-73516513 | MS.gene34054:intron | 25.0% |
| ! | TTTCTTCTTCAAAGTTATGT+TGG | - | chr1.2:73518129-73518148 | MS.gene34054:CDS | 25.0% |
| !! | ATATTTTCAAACGGAAACTT+TGG | - | chr1.2:73517997-73518016 | MS.gene34054:intron | 25.0% |
| !! | TGATTATAGTTTGGCATTTT+GGG | - | chr1.2:73515723-73515742 | MS.gene34054:CDS | 25.0% |
| !!! | AGTTTTGGAAACAAATGAAA+AGG | - | chr1.2:73516179-73516198 | MS.gene34054:intron | 25.0% |
| !!! | ATATTTGAATGGATTATGGA+TGG | - | chr1.2:73517816-73517835 | MS.gene34054:intron | 25.0% |
| !!! | ATTTACACTTGATTTGCTTA+AGG | - | chr1.2:73518349-73518368 | MS.gene34054:intron | 25.0% |
| !!! | CATTTATTTTACGTCTAGAT+TGG | + | chr1.2:73515917-73515936 | None:intergenic | 25.0% |
| !!! | CTGGTTACTTTTTCAAATTT+TGG | - | chr1.2:73517702-73517721 | MS.gene34054:CDS | 25.0% |
| !!! | CTTCTAAAACAGTTGAATTT+TGG | + | chr1.2:73515626-73515645 | None:intergenic | 25.0% |
| !!! | CTTTTGAAAATGGATTTGTT+AGG | - | chr1.2:73517493-73517512 | MS.gene34054:intron | 25.0% |
| !!! | GAATTTACCTTTTTTACTAG+AGG | - | chr1.2:73518037-73518056 | MS.gene34054:intron | 25.0% |
| !!! | GTTTAGCTTCTAACAATTTT+TGG | + | chr1.2:73519289-73519308 | None:intergenic | 25.0% |
| !!! | TGATTTTGATTTTTCTCAGT+TGG | - | chr1.2:73516356-73516375 | MS.gene34054:intron | 25.0% |
| !!! | TGTCATATTTGAATGGATTA+TGG | - | chr1.2:73517812-73517831 | MS.gene34054:intron | 25.0% |
| !!! | TTTCTTTGTTTTCTGTATGT+CGG | - | chr1.2:73518089-73518108 | MS.gene34054:CDS | 25.0% |
| !!! | TTTGATTTTTTGTTTGTTGC+AGG | - | chr1.2:73515116-73515135 | MS.gene34054:intron | 25.0% |
| AAACATGAGCATTAGCAATT+GGG | - | chr1.2:73517385-73517404 | MS.gene34054:CDS | 30.0% | |
| AAACTAACTCTTTCGTAATC+AGG | + | chr1.2:73515225-73515244 | None:intergenic | 30.0% | |
| AAATGAAAAGGAATTGGTCA+TGG | - | chr1.2:73516191-73516210 | MS.gene34054:intron | 30.0% | |
| AACCATAAAAGTAACTTCAG+TGG | + | chr1.2:73517060-73517079 | None:intergenic | 30.0% | |
| AAGTTGCAAACCTTTATCTT+TGG | - | chr1.2:73516956-73516975 | MS.gene34054:intron | 30.0% | |
| ACTCCAAATAAGAAGTTTAG+AGG | - | chr1.2:73518389-73518408 | MS.gene34054:intron | 30.0% | |
| AGAGATTTCATGTTAGTACA+TGG | - | chr1.2:73515644-73515663 | MS.gene34054:intron | 30.0% | |
| AGTTGAGATAAACTACATGA+GGG | + | chr1.2:73519338-73519357 | None:intergenic | 30.0% | |
| ATGCGATCATTATGTTCTAA+AGG | + | chr1.2:73516003-73516022 | None:intergenic | 30.0% | |
| ATTACATGTGAATGTGGTTA+GGG | - | chr1.2:73517462-73517481 | MS.gene34054:intron | 30.0% | |
| ATTGTGTGTCATAAATGAGA+AGG | - | chr1.2:73515676-73515695 | MS.gene34054:intron | 30.0% | |
| CAAGAAATCTATTAGGACTT+GGG | + | chr1.2:73519027-73519046 | None:intergenic | 30.0% | |
| CAGAAAACACTAGAAGTAAA+CGG | + | chr1.2:73519063-73519082 | None:intergenic | 30.0% | |
| CCAATTACAAGTCTATGATT+GGG | - | chr1.2:73517657-73517676 | MS.gene34054:intron | 30.0% | |
| CTAGAGTAATGAAGAACATA+TGG | - | chr1.2:73515828-73515847 | MS.gene34054:CDS | 30.0% | |
| CTCCAAATAAGAAGTTTAGA+GGG | - | chr1.2:73518390-73518409 | MS.gene34054:intron | 30.0% | |
| GAAATTCAAGATTGTTGTGA+AGG | - | chr1.2:73517615-73517634 | MS.gene34054:intron | 30.0% | |
| GGAAACAAATGAAAAGGAAT+TGG | - | chr1.2:73516185-73516204 | MS.gene34054:intron | 30.0% | |
| GTAAATTCACTCCTTGAAAT+TGG | + | chr1.2:73518025-73518044 | None:intergenic | 30.0% | |
| GTTAGACCAATTAGTGAATT+AGG | - | chr1.2:73515147-73515166 | MS.gene34054:intron | 30.0% | |
| TAAACATGAGCATTAGCAAT+TGG | - | chr1.2:73517384-73517403 | MS.gene34054:CDS | 30.0% | |
| TACTTGATTCAGTGATCATA+TGG | - | chr1.2:73515377-73515396 | MS.gene34054:CDS | 30.0% | |
| TAGTTGAGATAAACTACATG+AGG | + | chr1.2:73519339-73519358 | None:intergenic | 30.0% | |
| TATCTCAACTAACAAAATGC+AGG | - | chr1.2:73519348-73519367 | MS.gene34054:intron | 30.0% | |
| TATTACATGTGAATGTGGTT+AGG | - | chr1.2:73517461-73517480 | MS.gene34054:intron | 30.0% | |
| TCAAGAAATCTATTAGGACT+TGG | + | chr1.2:73519028-73519047 | None:intergenic | 30.0% | |
| TCAATTGATCACTAAGAACA+CGG | - | chr1.2:73516742-73516761 | MS.gene34054:CDS | 30.0% | |
| TCATGTTGAGATAAAATGGA+AGG | - | chr1.2:73519468-73519487 | MS.gene34054:CDS | 30.0% | |
| TCCAATTACAAGTCTATGAT+TGG | - | chr1.2:73517656-73517675 | MS.gene34054:intron | 30.0% | |
| TGAACAAATCTATAAAGACC+AGG | + | chr1.2:73516642-73516661 | None:intergenic | 30.0% | |
| TGATATTTGCATGTTTCATC+AGG | - | chr1.2:73515303-73515322 | MS.gene34054:intron | 30.0% | |
| TTCATACTATCTTCTCTGAA+TGG | + | chr1.2:73518443-73518462 | None:intergenic | 30.0% | |
| TTGAATTTCTCATTCCATTG+AGG | + | chr1.2:73517604-73517623 | None:intergenic | 30.0% | |
| TTGCGTATAATATTTCTCAG+TGG | - | chr1.2:73517194-73517213 | MS.gene34054:intron | 30.0% | |
| ! | AAGGTAAAATTTTCTCCCTT+CGG | - | chr1.2:73518644-73518663 | MS.gene34054:intron | 30.0% |
| ! | AGGTTTTACTTATCTTCTTC+TGG | - | chr1.2:73517683-73517702 | MS.gene34054:intron | 30.0% |
| ! | CTGATTATAGTTTGGCATTT+TGG | - | chr1.2:73515722-73515741 | MS.gene34054:CDS | 30.0% |
| ! | TCTTATCGCTGATTATAGTT+TGG | - | chr1.2:73515714-73515733 | MS.gene34054:CDS | 30.0% |
| ! | TGGTCTTTATAGATTTGTTC+AGG | - | chr1.2:73516641-73516660 | MS.gene34054:intron | 30.0% |
| !! | AAACTTTGGAACCAATTTCA+AGG | - | chr1.2:73518011-73518030 | MS.gene34054:intron | 30.0% |
| !! | ACGTTGATTCATCAAGAATA+GGG | + | chr1.2:73516999-73517018 | None:intergenic | 30.0% |
| !! | TACGTTGATTCATCAAGAAT+AGG | + | chr1.2:73517000-73517019 | None:intergenic | 30.0% |
| !! | TATTGGAAAGTATCAGATCA+AGG | - | chr1.2:73515510-73515529 | MS.gene34054:intron | 30.0% |
| !! | TCACTAAGTCAAAGGTATTA+AGG | - | chr1.2:73516100-73516119 | MS.gene34054:intron | 30.0% |
| !!! | GAACTTTAGTTTTCTGTCTA+AGG | - | chr1.2:73518961-73518980 | MS.gene34054:intron | 30.0% |
| !!! | GTGATTTTGTTTTTGTGTAC+AGG | - | chr1.2:73515438-73515457 | MS.gene34054:CDS | 30.0% |
| !!! | GTTTTTTCTGAACTGAATTG+AGG | - | chr1.2:73515039-73515058 | MS.gene34054:intron | 30.0% |
| AAAGGTCTTAAACTTATCCG+CGG | + | chr1.2:73516405-73516424 | None:intergenic | 35.0% | |
| AAAGTTGACGTCAACAGAAA+TGG | + | chr1.2:73516672-73516691 | None:intergenic | 35.0% | |
| AATGACATTCAAGTCTCAGA+TGG | - | chr1.2:73517960-73517979 | MS.gene34054:intron | 35.0% | |
| AATTGGAGAACTTGAGATTG+AGG | + | chr1.2:73517643-73517662 | None:intergenic | 35.0% | |
| ACATGAGAAGATACACATTG+AGG | - | chr1.2:73518922-73518941 | MS.gene34054:intron | 35.0% | |
| AGAATTCCAGTTTATGCTAG+AGG | - | chr1.2:73518889-73518908 | MS.gene34054:intron | 35.0% | |
| ATAAGTTCTTGCAAAGCAAG+TGG | + | chr1.2:73515174-73515193 | None:intergenic | 35.0% | |
| ATACTTATGGCACATACCAA+TGG | + | chr1.2:73515869-73515888 | None:intergenic | 35.0% | |
| ATATGCAATTAAGTGCAGGT+TGG | - | chr1.2:73518260-73518279 | MS.gene34054:intron | 35.0% | |
| ATCTTCTCTGAATGGAACAA+AGG | + | chr1.2:73518435-73518454 | None:intergenic | 35.0% | |
| ATGTGCCATAAGTATCTTCT+CGG | - | chr1.2:73515874-73515893 | MS.gene34054:CDS | 35.0% | |
| ATGTGTATCTTCTCATGTAG+AGG | + | chr1.2:73518920-73518939 | None:intergenic | 35.0% | |
| ATTGGAGAACTTGAGATTGA+GGG | + | chr1.2:73517642-73517661 | None:intergenic | 35.0% | |
| ATTTGATATGTGGCCTTTCT+TGG | - | chr1.2:73515348-73515367 | MS.gene34054:intron | 35.0% | |
| CAATTGATCACTAAGAACAC+GGG | - | chr1.2:73516743-73516762 | MS.gene34054:CDS | 35.0% | |
| CATGGAACAAGTCATCAAAT+GGG | - | chr1.2:73516209-73516228 | MS.gene34054:intron | 35.0% | |
| CCAGAATTCACAACGAAAAA+GGG | + | chr1.2:73515073-73515092 | None:intergenic | 35.0% | |
| CCCAATCATAGACTTGTAAT+TGG | + | chr1.2:73517660-73517679 | None:intergenic | 35.0% | |
| CTATACGTTCACTAAGTCAA+AGG | - | chr1.2:73516092-73516111 | MS.gene34054:intron | 35.0% | |
| CTATGTGCCTCTAGTAAAAA+AGG | + | chr1.2:73518047-73518066 | None:intergenic | 35.0% | |
| GAAGATAGTATGAAATTCGG+TGG | - | chr1.2:73518449-73518468 | MS.gene34054:intron | 35.0% | |
| GACTTATCTAAATAAGGAGC+AGG | + | chr1.2:73517141-73517160 | None:intergenic | 35.0% | |
| GAGTCTACTTTAAACTTCCA+AGG | + | chr1.2:73515978-73515997 | None:intergenic | 35.0% | |
| GAGTTTGATCAATTGAGTCT+TGG | - | chr1.2:73515538-73515557 | MS.gene34054:intron | 35.0% | |
| GATGATATGCAATTAAGTGC+AGG | - | chr1.2:73518256-73518275 | MS.gene34054:intron | 35.0% | |
| GCAAGGTCAATACTATGTTT+GGG | + | chr1.2:73516242-73516261 | None:intergenic | 35.0% | |
| GGGAATATTACATGTGAATG+TGG | - | chr1.2:73517456-73517475 | MS.gene34054:intron | 35.0% | |
| GTCTATGAAGATCAAAGTTC+AGG | - | chr1.2:73516269-73516288 | MS.gene34054:intron | 35.0% | |
| TAAGTTCTTGCAAAGCAAGT+GGG | + | chr1.2:73515173-73515192 | None:intergenic | 35.0% | |
| TACTTATGGCACATACCAAT+GGG | + | chr1.2:73515868-73515887 | None:intergenic | 35.0% | |
| TAGTTAGTTCATGAAGTGCA+GGG | + | chr1.2:73516904-73516923 | None:intergenic | 35.0% | |
| TCATGGAACAAGTCATCAAA+TGG | - | chr1.2:73516208-73516227 | MS.gene34054:intron | 35.0% | |
| TGCAAGGTCAATACTATGTT+TGG | + | chr1.2:73516243-73516262 | None:intergenic | 35.0% | |
| TGCCCTCTAAACTTCTTATT+TGG | + | chr1.2:73518395-73518414 | None:intergenic | 35.0% | |
| TGTTGAGATAAAATGGAAGG+TGG | - | chr1.2:73519471-73519490 | MS.gene34054:CDS | 35.0% | |
| TTCACATGTAATATTCCCAC+TGG | + | chr1.2:73517454-73517473 | None:intergenic | 35.0% | |
| TTCAGAAGGATATGTCAGAA+AGG | - | chr1.2:73518475-73518494 | MS.gene34054:intron | 35.0% | |
| TTCTGAATCAAAGCAAGTCA+AGG | - | chr1.2:73514943-73514962 | MS.gene34054:CDS | 35.0% | |
| TTTGTGTACAGGCAATTTGT+GGG | - | chr1.2:73515449-73515468 | MS.gene34054:CDS | 35.0% | |
| ! | ACTAAGAACACGGGAATTTT+AGG | - | chr1.2:73516752-73516771 | MS.gene34054:CDS | 35.0% |
| ! | ATCGACTTACCACAAATAGT+GGG | + | chr1.2:73515574-73515593 | None:intergenic | 35.0% |
| ! | CTTCATTTGACCATTTTCAG+AGG | + | chr1.2:73517853-73517872 | None:intergenic | 35.0% |
| ! | CTTTGACTTAGTGAACGTAT+AGG | + | chr1.2:73516094-73516113 | None:intergenic | 35.0% |
| ! | GAAAGTTTCTTGGGTGTTTT+TGG | - | chr1.2:73514866-73514885 | MS.gene34054:CDS | 35.0% |
| ! | GGGTTCTTTGAAAGTTTCTT+GGG | - | chr1.2:73514857-73514876 | MS.gene34054:CDS | 35.0% |
| ! | TACACTTCCATGTTTTGCAA+AGG | - | chr1.2:73516431-73516450 | MS.gene34054:intron | 35.0% |
| ! | TCACTAATTGGTCTAACAAC+AGG | + | chr1.2:73515144-73515163 | None:intergenic | 35.0% |
| ! | TGATAGTGTATCTGATGATG+AGG | - | chr1.2:73518508-73518527 | MS.gene34054:intron | 35.0% |
| ! | TTCTGCAGGTATGAAAGTTT+TGG | - | chr1.2:73516164-73516183 | MS.gene34054:intron | 35.0% |
| ! | TTTTGTGTACAGGCAATTTG+TGG | - | chr1.2:73515448-73515467 | MS.gene34054:CDS | 35.0% |
| !! | ACACGGGAATTTTAGGAATT+TGG | - | chr1.2:73516759-73516778 | MS.gene34054:CDS | 35.0% |
| !! | ACTGTTTGTTGTAATTCTGC+AGG | - | chr1.2:73516150-73516169 | MS.gene34054:intron | 35.0% |
| !! | CCTTTTTCGTTGTGAATTCT+GGG | - | chr1.2:73515071-73515090 | MS.gene34054:intron | 35.0% |
| !! | CTTCATTTTGCCTCTGAAAA+TGG | - | chr1.2:73517840-73517859 | MS.gene34054:intron | 35.0% |
| !! | TTTGCTATTGGAATTCCTCT+TGG | - | chr1.2:73514890-73514909 | MS.gene34054:CDS | 35.0% |
| !! | TTTTACTAGAGGCACATAGT+TGG | - | chr1.2:73518048-73518067 | MS.gene34054:intron | 35.0% |
| !!! | GGTGTTTTTGGTTTTGCTAT+TGG | - | chr1.2:73514878-73514897 | MS.gene34054:CDS | 35.0% |
| !!! | TGCCACTGAAGTTACTTTTA+TGG | - | chr1.2:73517055-73517074 | MS.gene34054:intron | 35.0% |
| AAACCAAGAAGAAGACCAAG+AGG | + | chr1.2:73514908-73514927 | None:intergenic | 40.0% | |
| AAAGGTTGTGGTGTCTTTGA+TGG | - | chr1.2:73516449-73516468 | MS.gene34054:intron | 40.0% | |
| AACAAAATGCAGGAATCCCT+GGG | - | chr1.2:73519358-73519377 | MS.gene34054:intron | 40.0% | |
| ACAAGTCTATGATTGGGACA+AGG | - | chr1.2:73517663-73517682 | MS.gene34054:intron | 40.0% | |
| ACATTCAAGTCTCAGATGGA+CGG | - | chr1.2:73517964-73517983 | MS.gene34054:intron | 40.0% | |
| ACCACAACCTTTGCAAAACA+TGG | + | chr1.2:73516441-73516460 | None:intergenic | 40.0% | |
| AGAAAACCACTATCAAGAGG+AGG | - | chr1.2:73517569-73517588 | MS.gene34054:intron | 40.0% | |
| AGGCGAAAAGAAAAGGACAA+AGG | - | chr1.2:73518625-73518644 | MS.gene34054:intron | 40.0% | |
| AGTGGGCCTAATTCACTAAT+TGG | + | chr1.2:73515156-73515175 | None:intergenic | 40.0% | |
| AGTTAGTTCATGAAGTGCAG+GGG | + | chr1.2:73516903-73516922 | None:intergenic | 40.0% | |
| ATAGGGATTTCCAAGATCTG+AGG | + | chr1.2:73516982-73517001 | None:intergenic | 40.0% | |
| CAAATTCCTCCTCTTGATAG+TGG | + | chr1.2:73517578-73517597 | None:intergenic | 40.0% | |
| CCCAGAATTCACAACGAAAA+AGG | + | chr1.2:73515074-73515093 | None:intergenic | 40.0% | |
| CGAAGAAAACCACTATCAAG+AGG | - | chr1.2:73517566-73517585 | MS.gene34054:intron | 40.0% | |
| CTAAAGGTGATCACTGCAAA+GGG | + | chr1.2:73518605-73518624 | None:intergenic | 40.0% | |
| CTTCATAGACAACACATGCA+AGG | + | chr1.2:73516259-73516278 | None:intergenic | 40.0% | |
| GAAATCTATTAGGACTTGGG+AGG | + | chr1.2:73519024-73519043 | None:intergenic | 40.0% | |
| GAAGTTTAGAGGGCAAATTG+TGG | - | chr1.2:73518400-73518419 | MS.gene34054:intron | 40.0% | |
| GATGGTACTTGTCGTTAATG+CGG | + | chr1.2:73519423-73519442 | None:intergenic | 40.0% | |
| GGAGATTAATCTGAGTGATG+TGG | - | chr1.2:73519387-73519406 | MS.gene34054:intron | 40.0% | |
| GGAGGAATTTGAATCCTCAA+TGG | - | chr1.2:73517587-73517606 | MS.gene34054:intron | 40.0% | |
| GGATATGTCAGAAAGGATAG+TGG | - | chr1.2:73518482-73518501 | MS.gene34054:intron | 40.0% | |
| GTAGCAATAAAGAAGCCAGT+GGG | - | chr1.2:73517436-73517455 | MS.gene34054:intron | 40.0% | |
| GTAGTTAGTTCATGAAGTGC+AGG | + | chr1.2:73516905-73516924 | None:intergenic | 40.0% | |
| GTCTTTGATGGAGAAGGTAA+GGG | - | chr1.2:73516461-73516480 | MS.gene34054:intron | 40.0% | |
| GTTCTGCAATGTAATCCCAT+TGG | - | chr1.2:73515850-73515869 | MS.gene34054:CDS | 40.0% | |
| TAACAAAATGCAGGAATCCC+TGG | - | chr1.2:73519357-73519376 | MS.gene34054:intron | 40.0% | |
| TATGCCTGAAATTCCTCTCT+GGG | - | chr1.2:73515191-73515210 | MS.gene34054:intron | 40.0% | |
| TCAAGTACCTTCTCCAAGAA+AGG | + | chr1.2:73515364-73515383 | None:intergenic | 40.0% | |
| TCTAAAGGTGATCACTGCAA+AGG | + | chr1.2:73518606-73518625 | None:intergenic | 40.0% | |
| TGCTACCGAGAAGATACTTA+TGG | + | chr1.2:73515882-73515901 | None:intergenic | 40.0% | |
| TGGAATTCTTCATTCCAACG+TGG | + | chr1.2:73518878-73518897 | None:intergenic | 40.0% | |
| TGTATCTTCTCATGTAGAGG+AGG | + | chr1.2:73518917-73518936 | None:intergenic | 40.0% | |
| TGTCTTTGATGGAGAAGGTA+AGG | - | chr1.2:73516460-73516479 | MS.gene34054:intron | 40.0% | |
| TTATCTTTGGCCTCAGATCT+TGG | - | chr1.2:73516969-73516988 | MS.gene34054:intron | 40.0% | |
| TTATGCCTGAAATTCCTCTC+TGG | - | chr1.2:73515190-73515209 | MS.gene34054:intron | 40.0% | |
| TTTGCAGTGATCACCTTTAG+AGG | - | chr1.2:73518605-73518624 | MS.gene34054:intron | 40.0% | |
| ! | AAATTCGGTGGATCTTCAGA+AGG | - | chr1.2:73518461-73518480 | MS.gene34054:intron | 40.0% |
| ! | AGATCTGAGGCCAAAGATAA+AGG | + | chr1.2:73516969-73516988 | None:intergenic | 40.0% |
| ! | ATTCCTCTTGGTCTTCTTCT+TGG | - | chr1.2:73514902-73514921 | MS.gene34054:CDS | 40.0% |
| ! | CCTTTAGAGGCGAAAAGAAA+AGG | - | chr1.2:73518618-73518637 | MS.gene34054:intron | 40.0% |
| ! | CCTTTTCTTTTCGCCTCTAA+AGG | + | chr1.2:73518621-73518640 | None:intergenic | 40.0% |
| ! | GATCGACTTACCACAAATAG+TGG | + | chr1.2:73515575-73515594 | None:intergenic | 40.0% |
| ! | GCGGATAAGTTTAAGACCTT+TGG | - | chr1.2:73516404-73516423 | MS.gene34054:intron | 40.0% |
| ! | GGGGTTCTTTGAAAGTTTCT+TGG | - | chr1.2:73514856-73514875 | MS.gene34054:CDS | 40.0% |
| ! | TACAGCCTCATGTGGATTTT+GGG | - | chr1.2:73516583-73516602 | MS.gene34054:intron | 40.0% |
| ! | TCCATGTTTTGCAAAGGTTG+TGG | - | chr1.2:73516437-73516456 | MS.gene34054:intron | 40.0% |
| !! | CCCTTTTTCGTTGTGAATTC+TGG | - | chr1.2:73515070-73515089 | MS.gene34054:intron | 40.0% |
| !! | CGGGAATTTTAGGAATTTGG+TGG | - | chr1.2:73516762-73516781 | MS.gene34054:CDS | 40.0% |
| !! | GCATGTTTCATCAGGTTGAT+TGG | - | chr1.2:73515311-73515330 | MS.gene34054:intron | 40.0% |
| !! | GGCAGTCAAGCTTTTGAAAA+TGG | - | chr1.2:73517483-73517502 | MS.gene34054:intron | 40.0% |
| !!! | TTGATAGTGGTTTTCTTCGC+TGG | + | chr1.2:73517565-73517584 | None:intergenic | 40.0% |
| ACAAAATGCAGGAATCCCTG+GGG | - | chr1.2:73519359-73519378 | MS.gene34054:intron | 45.0% | |
| ACATTGAGGTCATGAGCAAG+AGG | - | chr1.2:73518936-73518955 | MS.gene34054:intron | 45.0% | |
| ACTAGGAAACTTCCATTCGC+AGG | + | chr1.2:73516695-73516714 | None:intergenic | 45.0% | |
| ACTCTTCCTCCCACTATTTG+TGG | - | chr1.2:73515562-73515581 | MS.gene34054:intron | 45.0% | |
| ATGTCAAACTGAGCCTGACT+GGG | - | chr1.2:73517530-73517549 | MS.gene34054:intron | 45.0% | |
| ATTAATCTCCACATGCCCCA+GGG | + | chr1.2:73519377-73519396 | None:intergenic | 45.0% | |
| CTGAGTGATGTGGTGCATAA+TGG | - | chr1.2:73519397-73519416 | MS.gene34054:CDS | 45.0% | |
| CTTCATTCCAACGTGGTTGA+CGG | + | chr1.2:73518871-73518890 | None:intergenic | 45.0% | |
| GAACAAGTCATCAAATGGGC+TGG | - | chr1.2:73516213-73516232 | MS.gene34054:intron | 45.0% | |
| GCTGACACTAGATGCTTTCA+AGG | + | chr1.2:73517783-73517802 | None:intergenic | 45.0% | |
| GGTAGCAATAAAGAAGCCAG+TGG | - | chr1.2:73517435-73517454 | MS.gene34054:intron | 45.0% | |
| GTCAGGCTCAGTTTGACATA+TGG | + | chr1.2:73517529-73517548 | None:intergenic | 45.0% | |
| GTTAGTTCATGAAGTGCAGG+GGG | + | chr1.2:73516902-73516921 | None:intergenic | 45.0% | |
| GTTCAATGTACAGCCTCATG+TGG | - | chr1.2:73516575-73516594 | MS.gene34054:intron | 45.0% | |
| GTTTAGAGGGCAAATTGTGG+TGG | - | chr1.2:73518403-73518422 | MS.gene34054:intron | 45.0% | |
| TAACTACTTCAGTTGCTCGC+AGG | - | chr1.2:73516918-73516937 | MS.gene34054:intron | 45.0% | |
| TATGTCAAACTGAGCCTGAC+TGG | - | chr1.2:73517529-73517548 | MS.gene34054:intron | 45.0% | |
| TATGTGGCCTTTCTTGGAGA+AGG | - | chr1.2:73515354-73515373 | MS.gene34054:intron | 45.0% | |
| TGAGCCACATCTATACCGAA+GGG | + | chr1.2:73518662-73518681 | None:intergenic | 45.0% | |
| TGTGGTGTCTTTGATGGAGA+AGG | - | chr1.2:73516455-73516474 | MS.gene34054:intron | 45.0% | |
| TTCACCCAGAGAGGAATTTC+AGG | + | chr1.2:73515198-73515217 | None:intergenic | 45.0% | |
| TTCATTCCAACGTGGTTGAC+GGG | + | chr1.2:73518870-73518889 | None:intergenic | 45.0% | |
| TTCTCCCTTCGGTATAGATG+TGG | - | chr1.2:73518655-73518674 | MS.gene34054:intron | 45.0% | |
| TTGAGCCACATCTATACCGA+AGG | + | chr1.2:73518663-73518682 | None:intergenic | 45.0% | |
| TTTGCTTTCGGTTGTGGTAC+AGG | - | chr1.2:73518547-73518566 | MS.gene34054:intron | 45.0% | |
| ! | AGGCAGAGTGTTTGGTCAAT+AGG | + | chr1.2:73517763-73517782 | None:intergenic | 45.0% |
| ! | CATGGAAGTGTAGACACCAA+AGG | + | chr1.2:73516423-73516442 | None:intergenic | 45.0% |
| ! | GACTTACCACAAATAGTGGG+AGG | + | chr1.2:73515571-73515590 | None:intergenic | 45.0% |
| ! | GTACAGCCTCATGTGGATTT+TGG | - | chr1.2:73516582-73516601 | MS.gene34054:intron | 45.0% |
| ! | TACAAGTTTTTGCGACACCG+CGG | - | chr1.2:73516385-73516404 | MS.gene34054:intron | 45.0% |
| ! | TACGGCTTAAGCAGCTTTAG+AGG | + | chr1.2:73518317-73518336 | None:intergenic | 45.0% |
| ! | TCTGATGATGAGGTCCAAGA+AGG | - | chr1.2:73518518-73518537 | MS.gene34054:intron | 45.0% |
| ! | TGCTTTCAAGGCAGAGTGTT+TGG | + | chr1.2:73517771-73517790 | None:intergenic | 45.0% |
| !! | ACGGCTTAAGCAGCTTTAGA+GGG | + | chr1.2:73518316-73518335 | None:intergenic | 45.0% |
| !!! | GATTTTGGGTTGGCGATATC+TGG | - | chr1.2:73516597-73516616 | MS.gene34054:intron | 45.0% |
| AAAGCAAACCCGCTCCTTCT+TGG | + | chr1.2:73518535-73518554 | None:intergenic | 50.0% | |
| AGAAAACCCGTCAACCACGT+TGG | - | chr1.2:73518861-73518880 | MS.gene34054:CDS | 50.0% | |
| GACGTCAACTTTCCTGCGAA+TGG | - | chr1.2:73516680-73516699 | MS.gene34054:CDS | 50.0% | |
| GAGGCTCCTCTAGCATAAAC+TGG | + | chr1.2:73518898-73518917 | None:intergenic | 50.0% | |
| GATTAATCTCCACATGCCCC+AGG | + | chr1.2:73519378-73519397 | None:intergenic | 50.0% | |
| GCCAACCCAAAATCCACATG+AGG | + | chr1.2:73516591-73516610 | None:intergenic | 50.0% | |
| GGGGACATCATGTCAATACC+TGG | - | chr1.2:73516621-73516640 | MS.gene34054:intron | 50.0% | |
| GTTGGTGCACATGACAAGCT+GGG | - | chr1.2:73518278-73518297 | MS.gene34054:intron | 50.0% | |
| TGATGAGGTCCAAGAAGGAG+CGG | - | chr1.2:73518523-73518542 | MS.gene34054:intron | 50.0% | |
| TGTCAAACTGAGCCTGACTG+GGG | - | chr1.2:73517531-73517550 | MS.gene34054:intron | 50.0% | |
| ! | AGAAGGAGCGGGTTTGCTTT+CGG | - | chr1.2:73518535-73518554 | MS.gene34054:intron | 50.0% |
| !! | GCCTCATGTGGATTTTGGGT+TGG | - | chr1.2:73516587-73516606 | MS.gene34054:intron | 50.0% |
| !! | TTGGGTTGGCGATATCTGGA+GGG | - | chr1.2:73516601-73516620 | MS.gene34054:intron | 50.0% |
| !! | TTTGGGTTGGCGATATCTGG+AGG | - | chr1.2:73516600-73516619 | MS.gene34054:intron | 50.0% |
| ACAGGAGGCTGACGAAGTTG+AGG | - | chr1.2:73518565-73518584 | MS.gene34054:intron | 55.0% | |
| CAGGAGGCTGACGAAGTTGA+GGG | - | chr1.2:73518566-73518585 | MS.gene34054:intron | 55.0% | |
| CTGGAAGTTTGTCCCCAGTC+AGG | + | chr1.2:73517546-73517565 | None:intergenic | 55.0% | |
| GATGAGGTCCAAGAAGGAGC+GGG | - | chr1.2:73518524-73518543 | MS.gene34054:intron | 55.0% | |
| GCTTTCGGTTGTGGTACAGG+AGG | - | chr1.2:73518550-73518569 | MS.gene34054:intron | 55.0% | |
| TCAGGTGTCTTCACCCAGAG+AGG | + | chr1.2:73515207-73515226 | None:intergenic | 55.0% | |
| ! | AGCGGGTTTGCTTTCGGTTG+TGG | - | chr1.2:73518541-73518560 | MS.gene34054:intron | 55.0% |
| ! | GGTTGGTGCACATGACAAGC+TGG | - | chr1.2:73518277-73518296 | MS.gene34054:intron | 55.0% |
| !! | TGGGTTGGCGATATCTGGAG+GGG | - | chr1.2:73516602-73516621 | MS.gene34054:intron | 55.0% |
| GCAGGAATCCCTGGGGCATG+TGG | - | chr1.2:73519366-73519385 | MS.gene34054:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 73514854 | 73519498 | 73514854 | ID=MS.gene34054 |
| chr1.2 | mRNA | 73514854 | 73519498 | 73514854 | ID=MS.gene34054.t1;Parent=MS.gene34054 |
| chr1.2 | exon | 73519388 | 73519498 | 73519388 | ID=MS.gene34054.t1.exon1;Parent=MS.gene34054.t1 |
| chr1.2 | CDS | 73519388 | 73519498 | 73519388 | ID=cds.MS.gene34054.t1;Parent=MS.gene34054.t1 |
| chr1.2 | exon | 73519116 | 73519214 | 73519116 | ID=MS.gene34054.t1.exon2;Parent=MS.gene34054.t1 |
| chr1.2 | CDS | 73519116 | 73519214 | 73519116 | ID=cds.MS.gene34054.t1;Parent=MS.gene34054.t1 |
| chr1.2 | exon | 73518977 | 73519027 | 73518977 | ID=MS.gene34054.t1.exon3;Parent=MS.gene34054.t1 |
| chr1.2 | CDS | 73518977 | 73519027 | 73518977 | ID=cds.MS.gene34054.t1;Parent=MS.gene34054.t1 |
| chr1.2 | exon | 73518769 | 73518892 | 73518769 | ID=MS.gene34054.t1.exon4;Parent=MS.gene34054.t1 |
| chr1.2 | CDS | 73518769 | 73518892 | 73518769 | ID=cds.MS.gene34054.t1;Parent=MS.gene34054.t1 |
| chr1.2 | exon | 73518062 | 73518180 | 73518062 | ID=MS.gene34054.t1.exon5;Parent=MS.gene34054.t1 |
| chr1.2 | CDS | 73518062 | 73518180 | 73518062 | ID=cds.MS.gene34054.t1;Parent=MS.gene34054.t1 |
| chr1.2 | exon | 73517876 | 73517977 | 73517876 | ID=MS.gene34054.t1.exon6;Parent=MS.gene34054.t1 |
| chr1.2 | CDS | 73517876 | 73517977 | 73517876 | ID=cds.MS.gene34054.t1;Parent=MS.gene34054.t1 |
| chr1.2 | exon | 73517690 | 73517764 | 73517690 | ID=MS.gene34054.t1.exon7;Parent=MS.gene34054.t1 |
| chr1.2 | CDS | 73517690 | 73517764 | 73517690 | ID=cds.MS.gene34054.t1;Parent=MS.gene34054.t1 |
| chr1.2 | exon | 73517336 | 73517412 | 73517336 | ID=MS.gene34054.t1.exon8;Parent=MS.gene34054.t1 |
| chr1.2 | CDS | 73517336 | 73517412 | 73517336 | ID=cds.MS.gene34054.t1;Parent=MS.gene34054.t1 |
| chr1.2 | exon | 73516668 | 73516917 | 73516668 | ID=MS.gene34054.t1.exon9;Parent=MS.gene34054.t1 |
| chr1.2 | CDS | 73516668 | 73516917 | 73516668 | ID=cds.MS.gene34054.t1;Parent=MS.gene34054.t1 |
| chr1.2 | exon | 73515706 | 73516074 | 73515706 | ID=MS.gene34054.t1.exon10;Parent=MS.gene34054.t1 |
| chr1.2 | CDS | 73515706 | 73516074 | 73515706 | ID=cds.MS.gene34054.t1;Parent=MS.gene34054.t1 |
| chr1.2 | exon | 73515370 | 73515498 | 73515370 | ID=MS.gene34054.t1.exon11;Parent=MS.gene34054.t1 |
| chr1.2 | CDS | 73515370 | 73515498 | 73515370 | ID=cds.MS.gene34054.t1;Parent=MS.gene34054.t1 |
| chr1.2 | exon | 73514854 | 73514982 | 73514854 | ID=MS.gene34054.t1.exon12;Parent=MS.gene34054.t1 |
| chr1.2 | CDS | 73514854 | 73514982 | 73514854 | ID=cds.MS.gene34054.t1;Parent=MS.gene34054.t1 |
| Gene Sequence |
| Protein sequence |
