AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene34072

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34072.t1 MTR_1g094630 94.858 739 31 3 1 737 1 734 0.0 1419
MS.gene34072.t1 MTR_1g094630 94.730 740 32 3 1 738 32 766 0.0 1416
MS.gene34072.t1 MTR_1g094630 94.858 739 31 3 1 737 1 734 0.0 1415
MS.gene34072.t1 MTR_4g064670 40.841 737 371 25 21 737 20 711 2.82e-128 405
MS.gene34072.t1 MTR_4g064670 39.924 794 369 29 21 737 20 782 7.80e-127 403
MS.gene34072.t1 MTR_2g097670 37.748 808 388 23 21 737 21 804 3.40e-116 372
MS.gene34072.t1 MTR_2g097670 37.748 808 388 23 21 737 21 804 3.54e-115 372
MS.gene34072.t1 MTR_2g097670 34.694 98 63 1 641 737 852 949 2.87e-11 67.8
MS.gene34072.t1 MTR_8g022680 77.049 122 21 2 535 656 18 132 3.65e-45 159
MS.gene34072.t1 MTR_2g036900 47.668 193 93 3 550 737 559 748 2.96e-43 169
MS.gene34072.t1 MTR_2g036900 47.668 193 93 3 550 737 559 748 4.04e-43 168
MS.gene34072.t1 MTR_5g080390 35.241 332 167 11 34 349 32 331 5.19e-36 146
MS.gene34072.t1 MTR_5g080390 37.255 102 63 1 642 742 740 841 3.31e-13 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34072.t1 AT3G10360 41.131 778 360 26 16 737 21 756 2.35e-148 459
MS.gene34072.t1 AT3G10360 35.714 98 62 1 641 737 804 901 1.74e-11 68.6
MS.gene34072.t1 AT2G29140 35.097 775 367 27 21 737 22 718 5.80e-98 325
MS.gene34072.t1 AT2G29140 30.400 125 84 2 621 742 671 795 6.86e-12 69.7
MS.gene34072.t1 AT2G29140 34.694 98 63 1 641 737 766 863 1.73e-11 68.6
MS.gene34072.t1 AT2G29140 35.097 775 367 27 21 737 22 718 5.80e-98 325
MS.gene34072.t1 AT2G29140 30.400 125 84 2 621 742 671 795 6.86e-12 69.7
MS.gene34072.t1 AT2G29140 34.694 98 63 1 641 737 766 863 1.73e-11 68.6
MS.gene34072.t1 AT2G29200 50.644 233 104 5 508 737 498 722 7.25e-58 213
MS.gene34072.t1 AT2G29200 32.000 125 82 2 621 742 675 799 3.26e-13 73.9
MS.gene34072.t1 AT2G29200 34.694 98 63 1 641 737 770 867 2.56e-11 67.8
MS.gene34072.t1 AT2G29200 50.644 233 104 5 508 737 498 722 7.25e-58 213
MS.gene34072.t1 AT2G29200 32.000 125 82 2 621 742 675 799 3.26e-13 73.9
MS.gene34072.t1 AT2G29200 34.694 98 63 1 641 737 770 867 2.56e-11 67.8
MS.gene34072.t1 AT2G29190 50.215 233 101 7 508 737 506 726 5.38e-53 198
MS.gene34072.t1 AT2G29190 31.200 125 83 2 621 742 679 803 7.37e-12 69.7
MS.gene34072.t1 AT2G29190 50.215 233 101 7 508 737 506 726 5.38e-53 198
MS.gene34072.t1 AT2G29190 31.200 125 83 2 621 742 679 803 7.37e-12 69.7
MS.gene34072.t1 AT4G25880 67.568 111 36 0 627 737 514 624 2.35e-42 166
MS.gene34072.t1 AT4G25880 67.568 111 36 0 627 737 514 624 2.35e-42 166
MS.gene34072.t1 AT4G25880 67.568 111 36 0 627 737 514 624 2.42e-42 166
MS.gene34072.t1 AT3G20250 65.455 110 38 0 628 737 563 672 1.21e-38 154
MS.gene34072.t1 AT3G20250 42.500 80 46 0 50 129 59 138 2.71e-11 67.8
MS.gene34072.t1 AT3G20250 36.735 98 61 1 641 737 720 817 4.76e-11 67.0
MS.gene34072.t1 AT3G20250 65.455 110 38 0 628 737 599 708 1.45e-38 154
MS.gene34072.t1 AT3G20250 42.500 80 46 0 50 129 59 138 3.29e-11 67.4
MS.gene34072.t1 AT3G20250 36.735 98 61 1 641 737 756 853 5.09e-11 67.0
MS.gene34072.t1 AT3G20250 65.455 110 38 0 628 737 599 708 1.45e-38 154
MS.gene34072.t1 AT3G20250 42.500 80 46 0 50 129 59 138 3.29e-11 67.4
MS.gene34072.t1 AT3G20250 36.735 98 61 1 641 737 756 853 5.09e-11 67.0
MS.gene34072.t1 AT4G25880 63.964 111 34 1 627 737 514 618 1.61e-37 151
MS.gene34072.t1 AT4G25880 63.964 111 34 1 627 737 514 618 1.68e-37 150
MS.gene34072.t1 AT1G22240 35.849 106 64 2 636 738 190 294 5.53e-14 75.9
MS.gene34072.t1 AT1G78160 35.354 99 61 1 643 738 331 429 4.17e-13 73.2
MS.gene34072.t1 AT1G78160 35.354 99 61 1 643 738 333 431 4.22e-13 73.2

Find 173 sgRNAs with CRISPR-Local

Find 215 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTAATCAAGGGTTATT+TGG 0.132275 1.2:-73993683 MS.gene34072:CDS
CGATCAAATGTGCATTCTTC+TGG 0.224716 1.2:-73994219 MS.gene34072:CDS
GTGTTCTCTGCTGAAAATAT+TGG 0.241957 1.2:-73994528 MS.gene34072:CDS
TTGTCTGGGTTAAATTTATC+AGG 0.258416 1.2:-73994444 MS.gene34072:CDS
CTCCCACTTCTTAGCAAATC+TGG 0.263246 1.2:-73993707 MS.gene34072:CDS
CTTCCAATAACATGCGATTC+AGG 0.263550 1.2:+73994588 None:intergenic
ACCCCTGAATCGCATGTTAT+TGG 0.270879 1.2:-73994591 MS.gene34072:CDS
TGTTGCAAGCTCATTATGTT+TGG 0.276631 1.2:+73994311 None:intergenic
TTCTATGATGAGAAGTTCTA+TGG 0.282990 1.2:-73993543 MS.gene34072:CDS
CATCTTCGATCGAAAGATTT+GGG 0.284253 1.2:-73995262 MS.gene34072:CDS
TTATTCAATGTTGTGTTTGC+AGG 0.292684 1.2:+73994141 None:intergenic
TTCTTAATCAAGGGTTATTT+GGG 0.298534 1.2:-73993682 MS.gene34072:CDS
GATATGGTGTCCTCTTTGTC+TGG 0.299367 1.2:-73994459 MS.gene34072:CDS
ACAATGCATTTGGTGATATA+AGG 0.323839 1.2:-73994758 MS.gene34072:CDS
TCACTTCCTTCTCTTGGATC+TGG 0.324209 1.2:-73993605 MS.gene34072:CDS
TATGACCGATCTCGCCGATA+TGG 0.325342 1.2:-73994475 MS.gene34072:CDS
CATGTTATTGGAAGACCTAT+TGG 0.332634 1.2:-73994579 MS.gene34072:CDS
TCATCTTCGATCGAAAGATT+TGG 0.338235 1.2:-73995263 MS.gene34072:CDS
AGCTCATGGCATGCTGATAT+TGG 0.339561 1.2:-73993509 MS.gene34072:CDS
CATTCAAACTAAATGTGTTA+AGG 0.351263 1.2:+73994286 None:intergenic
ATCGGCGAGATCGGTCATAT+TGG 0.354680 1.2:+73994479 None:intergenic
AATTCCTCACTTCCTTCTCT+TGG 0.354783 1.2:-73993611 MS.gene34072:CDS
ATCCGAAAGTTCAAAAGGTT+TGG 0.355350 1.2:+73993427 None:intergenic
GAATTGGCCAACCAACTTAC+AGG 0.365800 1.2:-73993017 MS.gene34072:CDS
CGATCGAAAGATTTGGGGAT+TGG 0.367206 1.2:-73995256 MS.gene34072:CDS
GAGGGATCGTTAAGTGCTTT+TGG 0.377684 1.2:-73995491 MS.gene34072:CDS
GGTCTTGGAATGCCACATTC+AGG 0.378919 1.2:-73993647 MS.gene34072:CDS
CCTCTTAGTCTGCAAATGTA+TGG 0.380351 1.2:-73992984 MS.gene34072:CDS
CTGATGAACGCAACCCCTCC+AGG 0.385374 1.2:+73994706 None:intergenic
ATTATTCATTTCCAGCTTTG+AGG 0.387105 1.2:-73993976 MS.gene34072:intron
TGAATTCAATTCTGCAACTC+TGG 0.390262 1.2:-73993903 MS.gene34072:CDS
GTTGCAAGCTCATTATGTTT+GGG 0.390790 1.2:+73994312 None:intergenic
TGTTCTCTGCTGAAAATATT+GGG 0.390928 1.2:-73994527 MS.gene34072:CDS
TTCTGAAGTCCGACCAAACC+TGG 0.395317 1.2:+73994675 None:intergenic
GCGATGAACTATCACCGTTC+GGG 0.398606 1.2:+73995219 None:intergenic
CCAAATGCATTGTGACTTGC+TGG 0.403734 1.2:+73994768 None:intergenic
CTCGCACCAAGACCAGTTCC+TGG 0.403737 1.2:+73995056 None:intergenic
ATCAGCCTCTACCCCAGGTT+TGG 0.404746 1.2:-73994688 MS.gene34072:CDS
CTGATCATGTGGTACAGTTC+AGG 0.408395 1.2:-73993400 MS.gene34072:intron
TGATAGTCAAAGAAAGGAAT+TGG 0.410029 1.2:-73993033 MS.gene34072:CDS
CACTGTTGATCGTGAGCCCC+TGG 0.410322 1.2:-73994724 MS.gene34072:CDS
TGCTGGACGTGACATATTGC+TGG 0.414461 1.2:+73994785 None:intergenic
CAGGATATGCACCAGGAACT+TGG 0.415432 1.2:+73994160 None:intergenic
GGCTTGATGACTGATGTCTT+TGG 0.427749 1.2:-73993199 MS.gene34072:CDS
AAATCTGGGCTTCTTAATCA+AGG 0.429011 1.2:-73993692 MS.gene34072:CDS
TTGGGCAAATTAACATTGTT+TGG 0.429262 1.2:+73994330 None:intergenic
AACACTTTGCTACCCATTTG+AGG 0.430251 1.2:+73994546 None:intergenic
AACGTGGTTACGATATTTAT+AGG 0.433335 1.2:-73995538 MS.gene34072:CDS
TTCACAACATGGAGACTTAG+AGG 0.433352 1.2:-73993786 MS.gene34072:CDS
ATTGGAAGACCTATTGGATC+TGG 0.438501 1.2:-73994573 MS.gene34072:CDS
CCGAACTTTGCTGCAAGCAT+TGG 0.441892 1.2:+73993867 None:intergenic
CCAGCAAGTCACAATGCATT+TGG 0.442961 1.2:-73994768 MS.gene34072:CDS
CGTTATTGTCAAAAGAAGAT+TGG 0.444080 1.2:-73995319 MS.gene34072:CDS
AAACATTGGATTTACCGAAT+AGG 0.445176 1.2:-73995637 MS.gene34072:CDS
GGAGATGGCCGGTGGGAGTA+AGG 0.453948 1.2:-73995669 None:intergenic
GTGTCTTCAAGTGTCCTATT+CGG 0.458064 1.2:+73995623 None:intergenic
AGAAGTTCTATGGGAGGGTC+TGG 0.458810 1.2:-73993533 MS.gene34072:CDS
ACAGGCAGAAGATGATTTGA+TGG 0.460113 1.2:-73995165 MS.gene34072:CDS
AAGATGATTTGATGGAACTA+AGG 0.465209 1.2:-73995157 MS.gene34072:CDS
AATAATCTCAGGAAATATCT+TGG 0.467432 1.2:+73993234 None:intergenic
CCAATGCTTGCAGCAAAGTT+CGG 0.468395 1.2:-73993867 MS.gene34072:CDS
TGGATCTGGAGTTCCTCAAA+TGG 0.469562 1.2:-73994559 MS.gene34072:CDS
GGGAGTCAGCCATATGGTCT+TGG 0.470079 1.2:-73993662 MS.gene34072:CDS
AGCGATGAACTATCACCGTT+CGG 0.470389 1.2:+73995218 None:intergenic
GTGATATCCGAAAGTTCAAA+AGG 0.473663 1.2:+73993422 None:intergenic
CAAAGGTTTCAAGCTGGTGG+TGG 0.474224 1.2:-73995287 MS.gene34072:CDS
ATGACAAGAATGCCAGGAAC+TGG 0.476029 1.2:-73995068 MS.gene34072:CDS
TACAATAATCATCTTGAGAC+AGG 0.476478 1.2:-73994114 MS.gene34072:intron
AGAATGCCAGGAACTGGTCT+TGG 0.482420 1.2:-73995062 MS.gene34072:CDS
CGTTCATCAGCCTCTACCCC+AGG 0.483193 1.2:-73994693 MS.gene34072:CDS
TCAGTTACTTGAGAGACATA+TGG 0.483266 1.2:-73995096 MS.gene34072:CDS
TGGGAGGGTCTGGCAGCTCA+TGG 0.486111 1.2:-73993523 MS.gene34072:CDS
GGACACCATATCGGCGAGAT+CGG 0.489451 1.2:+73994470 None:intergenic
ATATGGTGTCCTCTTTGTCT+GGG 0.490484 1.2:-73994458 MS.gene34072:CDS
TCCGACCAAACCTGGGGTAG+AGG 0.493025 1.2:+73994683 None:intergenic
CCTGGAGAGATTTCGTCCAC+TGG 0.494310 1.2:+73995130 None:intergenic
TGAGGAACTCCAGATCCAAT+AGG 0.495520 1.2:+73994564 None:intergenic
TGGACACAATATAGATGCAC+TGG 0.495550 1.2:-73993942 MS.gene34072:CDS
TCCCACTTCTTAGCAAATCT+GGG 0.496621 1.2:-73993706 MS.gene34072:CDS
CTAATTTCTGCTGAATAAAG+CGG 0.502351 1.2:+73993281 None:intergenic
TCGAAAGATTTGGGGATTGG+AGG 0.503141 1.2:-73995253 MS.gene34072:CDS
AACGATCCCTCGACTGTTGG+AGG 0.503542 1.2:+73995503 None:intergenic
TAACTGAGTTGAACTCTGCC+TGG 0.504989 1.2:+73995112 None:intergenic
TTCCAATAACATGCGATTCA+GGG 0.506033 1.2:+73994589 None:intergenic
AGACAAAGAGGACACCATAT+CGG 0.508011 1.2:+73994461 None:intergenic
TAATGCAGTACTGATCAGTA+TGG 0.509190 1.2:-73993307 MS.gene34072:intron
CATTGCAGAGTGAGCTGGAA+AGG 0.509406 1.2:-73995601 MS.gene34072:CDS
CCAGTGGACGAAATCTCTCC+AGG 0.513577 1.2:-73995130 MS.gene34072:CDS
TTATTTGGGAGTCAGCCATA+TGG 0.518384 1.2:-73993668 MS.gene34072:CDS
CCATACATTTGCAGACTAAG+AGG 0.518638 1.2:+73992984 None:intergenic
CTTAACGATCCCTCGACTGT+TGG 0.519555 1.2:+73995500 None:intergenic
TGGCCAGCAAAATCTATACT+TGG 0.521119 1.2:+73994180 None:intergenic
GCAGAAATTAGAAACAGCTT+CGG 0.523204 1.2:-73993269 MS.gene34072:CDS
TGATGAACGCAACCCCTCCA+GGG 0.523980 1.2:+73994707 None:intergenic
ATTCGTTCATTCTCAAACAG+TGG 0.524020 1.2:+73993578 None:intergenic
CGGTACTGATAGTCAAAGAA+AGG 0.525687 1.2:-73993039 MS.gene34072:CDS
ATCTCTACTCATCCCATGCA+TGG 0.527654 1.2:+73993838 None:intergenic
CGCATGAGAGCATTAATCCT+AGG 0.533464 1.2:-73995352 MS.gene34072:CDS
GGATCTGGAGTTCCTCAAAT+GGG 0.533967 1.2:-73994558 MS.gene34072:CDS
AGCCCAGATTTGCTAAGAAG+TGG 0.534392 1.2:+73993704 None:intergenic
GTTGATCGTGAGCCCCTGGA+GGG 0.534451 1.2:-73994720 MS.gene34072:CDS
GGGAAGAGTAATAATAATGA+TGG 0.535853 1.2:-73995431 MS.gene34072:CDS
GGATGAGATTCGATCACATC+CGG 0.536572 1.2:-73995396 MS.gene34072:CDS
GATATCTGCTTTCCTGAATG+TGG 0.536838 1.2:+73993635 None:intergenic
CACATCCACCTTACTCCCAC+CGG 0.537841 1.2:+73995661 None:intergenic
GCCTCTACCCCAGGTTTGGT+CGG 0.538314 1.2:-73994684 MS.gene34072:CDS
AGACACATTGCAGAGTGAGC+TGG 0.539066 1.2:-73995606 MS.gene34072:CDS
CGTGCATGAGGAATAATCTC+AGG 0.543458 1.2:+73993223 None:intergenic
ACTTTAGAGTTGGAGATGGC+CGG 0.547353 1.2:-73995680 None:intergenic
GTAAAACATGACCTGTAAGT+TGG 0.548500 1.2:+73993006 None:intergenic
TGTGGCATTCCAAGACCATA+TGG 0.557757 1.2:+73993653 None:intergenic
GACATATTGCTGGACAAAGC+GGG 0.558388 1.2:+73994795 None:intergenic
TAATAATACGAAAGATAAGC+CGG 0.562624 1.2:+73995377 None:intergenic
TAAATTTAACCCAGACAAAG+AGG 0.562958 1.2:+73994449 None:intergenic
AGTTCGGAGTACTCCATGCA+TGG 0.566960 1.2:-73993851 MS.gene34072:CDS
GCCTGTTGTACAGAAAATCC+CGG 0.567341 1.2:+73995182 None:intergenic
AATAACGGTGGTGGTAACCT+AGG 0.569257 1.2:+73995335 None:intergenic
GTTCTTGAACTCATCGAGCA+AGG 0.573052 1.2:+73993457 None:intergenic
ATTACAGAGCTAATAATAGC+GGG 0.574583 1.2:-73995451 MS.gene34072:CDS
TCCAATAACATGCGATTCAG+GGG 0.575152 1.2:+73994590 None:intergenic
TAAGGTGGATGTGCAAACAT+TGG 0.575374 1.2:-73995651 MS.gene34072:CDS
TGCTGATATTGGCAATAACA+TGG 0.579496 1.2:-73993498 MS.gene34072:CDS
GATGGTATGACAAGAATGCC+AGG 0.579752 1.2:-73995074 MS.gene34072:CDS
TTGGCAATAACATGGAGAGT+AGG 0.581874 1.2:-73993490 MS.gene34072:CDS
AATCTGGGCTTCTTAATCAA+GGG 0.585043 1.2:-73993691 MS.gene34072:CDS
CAGTTTATTAATCGAGAACG+TGG 0.585182 1.2:-73995554 MS.gene34072:CDS
GGTTACGATATTTATAGGAG+TGG 0.585655 1.2:-73995533 MS.gene34072:CDS
AACATGACCTGTAAGTTGGT+TGG 0.587110 1.2:+73993010 None:intergenic
ATGGAGACTTAGAGGGACTT+CGG 0.587677 1.2:-73993778 MS.gene34072:CDS
GATGGCCGGTGGGAGTAAGG+TGG 0.591616 1.2:-73995666 MS.gene34072:CDS
GCCCAGATTTGCTAAGAAGT+GGG 0.592221 1.2:+73993705 None:intergenic
AGGAAGAATGCAACCCCGAA+CGG 0.593437 1.2:-73995233 MS.gene34072:CDS
TCTGAAGTCCGACCAAACCT+GGG 0.595260 1.2:+73994676 None:intergenic
GCTTTGAGGAGTCGTAGAGA+TGG 0.600609 1.2:-73993962 MS.gene34072:CDS
TCTATGATGAGAAGTTCTAT+GGG 0.602254 1.2:-73993542 MS.gene34072:CDS
GTTGCACAAAGGTTTCAAGC+TGG 0.604886 1.2:-73995293 MS.gene34072:CDS
TGTTGATCGTGAGCCCCTGG+AGG 0.605487 1.2:-73994721 MS.gene34072:CDS
TCACAACATGGAGACTTAGA+GGG 0.605858 1.2:-73993785 MS.gene34072:CDS
GATGCACTGGGAAATCAAGT+AGG 0.606300 1.2:-73993929 MS.gene34072:CDS
GATGAACGCAACCCCTCCAG+GGG 0.606359 1.2:+73994708 None:intergenic
TTAGAGTTGGAGATGGCCGG+TGG 0.606382 1.2:-73995677 None:intergenic
GAGATTATTCCTCATGCACG+TGG 0.606869 1.2:-73993220 MS.gene34072:CDS
AGATCCAAGAGAAGGAAGTG+AGG 0.607314 1.2:+73993607 None:intergenic
GTTCGGAGTACTCCATGCAT+GGG 0.608483 1.2:-73993850 MS.gene34072:CDS
AAAGGTTTCAAGCTGGTGGT+GGG 0.609555 1.2:-73995286 MS.gene34072:CDS
GGATTTCCAGATCCAAGAGA+AGG 0.610022 1.2:+73993599 None:intergenic
GTCATCAAGCCACGTGCATG+AGG 0.612201 1.2:+73993211 None:intergenic
TTCGGATATCACTGATCATG+TGG 0.612905 1.2:-73993411 MS.gene34072:CDS
TGATGAGAAGTTCTATGGGA+GGG 0.616636 1.2:-73993538 MS.gene34072:CDS
ATCTTCGATCGAAAGATTTG+GGG 0.618852 1.2:-73995261 MS.gene34072:CDS
GCACAAAGGTTTCAAGCTGG+TGG 0.629515 1.2:-73995290 MS.gene34072:CDS
AGTGCGCCTCCAACAGTCGA+GGG 0.634593 1.2:-73995509 MS.gene34072:CDS
AAGATTGGCGTGTTGCACAA+AGG 0.636137 1.2:-73995304 MS.gene34072:CDS
GTGTTTGCAGGATATGCACC+AGG 0.641149 1.2:+73994153 None:intergenic
AAGTGCGCCTCCAACAGTCG+AGG 0.647392 1.2:-73995510 MS.gene34072:CDS
GGTGATATAAGGAACTCGAC+TGG 0.648016 1.2:-73994747 MS.gene34072:CDS
GATTACAGAGCTAATAATAG+CGG 0.650364 1.2:-73995452 MS.gene34072:CDS
ATGATGAGAAGTTCTATGGG+AGG 0.656883 1.2:-73993539 MS.gene34072:CDS
CGATGAACTATCACCGTTCG+GGG 0.666661 1.2:+73995220 None:intergenic
GGACACAATATAGATGCACT+GGG 0.670012 1.2:-73993941 MS.gene34072:CDS
TAGAGTTGGAGATGGCCGGT+GGG 0.671149 1.2:-73995676 None:intergenic
TGCAAGCATTGGATGATACG+TGG 0.671611 1.2:+73993878 None:intergenic
TGACATATTGCTGGACAAAG+CGG 0.677207 1.2:+73994794 None:intergenic
GCAAGCATTGGATGATACGT+GGG 0.687503 1.2:+73993879 None:intergenic
CTGAAGTCCGACCAAACCTG+GGG 0.688804 1.2:+73994677 None:intergenic
TTACTTGAGAGACATATGGA+TGG 0.692158 1.2:-73995092 MS.gene34072:CDS
TTGATCGTGAGCCCCTGGAG+GGG 0.698290 1.2:-73994719 MS.gene34072:CDS
TATTGGAAGAGTGACCATTG+TGG 0.700355 1.2:+73994496 None:intergenic
TTGGTCGGACTTCAGAACCA+CGG 0.706544 1.2:-73994669 MS.gene34072:CDS
ATGGAACTAAGGAAAGCCAG+TGG 0.715879 1.2:-73995146 MS.gene34072:CDS
ATTGGGTTGAGTAACCACAA+TGG 0.735692 1.2:-73994510 MS.gene34072:CDS
AACTGTGAGAATTTACACCG+TGG 0.749393 1.2:+73994652 None:intergenic
TGGTTGCAGAGTGATTCAGA+AGG 0.784194 1.2:-73992964 MS.gene34072:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTTTTTCATCTTAT+TGG + chr1.2:73993456-73993475 None:intergenic 10.0%
!! CATCTTATACAAAAATATAT+CGG + chr1.2:73995525-73995544 None:intergenic 15.0%
!!! ATAAATATGCTCTTTTTATT+TGG - chr1.2:73995287-73995306 MS.gene34072:CDS 15.0%
!! ATGTTTGATATACAAAAAAG+AGG + chr1.2:73995599-73995618 None:intergenic 20.0%
!! GAAAAATTTCTCATTTGAAA+AGG + chr1.2:73994587-73994606 None:intergenic 20.0%
!! GAATAATACAAGCAATAAAT+AGG + chr1.2:73993520-73993539 None:intergenic 20.0%
!! TAAGTGTAATAAAATGCTAA+TGG + chr1.2:73993545-73993564 None:intergenic 20.0%
!!! ATTTTTTTCATCTTATTGGA+TGG + chr1.2:73993452-73993471 None:intergenic 20.0%
!!! CGATATATTTTTGTATAAGA+TGG - chr1.2:73995523-73995542 MS.gene34072:CDS 20.0%
!!! TTTTTTTCATCTTATTGGAT+GGG + chr1.2:73993451-73993470 None:intergenic 20.0%
! AATAATCTCAGGAAATATCT+TGG + chr1.2:73995168-73995187 None:intergenic 25.0%
! CATTCAAACTAAATGTGTTA+AGG + chr1.2:73994116-73994135 None:intergenic 25.0%
! GAAATGAATAATGAACAGTT+AGG + chr1.2:73994415-73994434 None:intergenic 25.0%
! TAATAATACGAAAGATAAGC+CGG + chr1.2:73993025-73993044 None:intergenic 25.0%
! TTCTTAATCAAGGGTTATTT+GGG - chr1.2:73994717-73994736 MS.gene34072:CDS 25.0%
!! ATGTTATTCAGACATTTTTC+AGG - chr1.2:73993372-73993391 MS.gene34072:intron 25.0%
!! CAATCTTCTTTTGACAATAA+CGG + chr1.2:73993082-73993101 None:intergenic 25.0%
!! TGAAGTTTAGTGTTATTAGT+TGG - chr1.2:73994388-73994407 MS.gene34072:CDS 25.0%
!!! ATATTACAGTTTTTTGAGCA+CGG - chr1.2:73995340-73995359 MS.gene34072:CDS 25.0%
!!! TATATCGGATTTTAAGAGTT+AGG + chr1.2:73995510-73995529 None:intergenic 25.0%
!!! TTTGAAGTTAATGTTTTAGC+AGG - chr1.2:73993567-73993586 MS.gene34072:CDS 25.0%
AAACATTGGATTTACCGAAT+AGG - chr1.2:73992762-73992781 MS.gene34072:intron 30.0%
AACGTGGTTACGATATTTAT+AGG - chr1.2:73992861-73992880 MS.gene34072:intron 30.0%
AAGATGATTTGATGGAACTA+AGG - chr1.2:73993242-73993261 MS.gene34072:CDS 30.0%
ATTACAGAGCTAATAATAGC+GGG - chr1.2:73992948-73992967 MS.gene34072:intron 30.0%
ATTATTCATTTCCAGCTTTG+AGG - chr1.2:73994423-73994442 MS.gene34072:CDS 30.0%
CGTTATTGTCAAAAGAAGAT+TGG - chr1.2:73993080-73993099 MS.gene34072:intron 30.0%
CTAATTTCTGCTGAATAAAG+CGG + chr1.2:73995121-73995140 None:intergenic 30.0%
CTTCTTAATCAAGGGTTATT+TGG - chr1.2:73994716-73994735 MS.gene34072:CDS 30.0%
GATTACAGAGCTAATAATAG+CGG - chr1.2:73992947-73992966 MS.gene34072:intron 30.0%
GGGAAGAGTAATAATAATGA+TGG - chr1.2:73992968-73992987 MS.gene34072:CDS 30.0%
TAAATTTAACCCAGACAAAG+AGG + chr1.2:73993953-73993972 None:intergenic 30.0%
TACAATAATCATCTTGAGAC+AGG - chr1.2:73994285-73994304 MS.gene34072:CDS 30.0%
TCTATGATGAGAAGTTCTAT+GGG - chr1.2:73994857-73994876 MS.gene34072:intron 30.0%
TGATAGTCAAAGAAAGGAAT+TGG - chr1.2:73995366-73995385 MS.gene34072:CDS 30.0%
TGTTCTCTGCTGAAAATATT+GGG - chr1.2:73993872-73993891 MS.gene34072:CDS 30.0%
TTATTCAATGTTGTGTTTGC+AGG + chr1.2:73994261-73994280 None:intergenic 30.0%
TTCTATGATGAGAAGTTCTA+TGG - chr1.2:73994856-73994875 MS.gene34072:intron 30.0%
TTGGGCAAATTAACATTGTT+TGG + chr1.2:73994072-73994091 None:intergenic 30.0%
TTGTCTGGGTTAAATTTATC+AGG - chr1.2:73993955-73993974 MS.gene34072:CDS 30.0%
! AACCAAACCTTTTGAACTTT+CGG - chr1.2:73994970-73994989 MS.gene34072:intron 30.0%
! ACAATGCATTTGGTGATATA+AGG - chr1.2:73993641-73993660 MS.gene34072:CDS 30.0%
!!! AAGTTAATGTTTTAGCAGGA+TGG - chr1.2:73993571-73993590 MS.gene34072:CDS 30.0%
!!! TTTTTTTTTTAGATGCGAGC+AGG - chr1.2:73995658-73995677 MS.gene34072:CDS 30.0%
AAATCTGGGCTTCTTAATCA+AGG - chr1.2:73994707-73994726 MS.gene34072:CDS 35.0%
AATCTGGGCTTCTTAATCAA+GGG - chr1.2:73994708-73994727 MS.gene34072:CDS 35.0%
ACAAAAAAAGAGAGAGAGAG+AGG + chr1.2:73994314-73994333 None:intergenic 35.0%
ATCCGAAAGTTCAAAAGGTT+TGG + chr1.2:73994975-73994994 None:intergenic 35.0%
ATCTTCGATCGAAAGATTTG+GGG - chr1.2:73993138-73993157 MS.gene34072:intron 35.0%
ATTCGTTCATTCTCAAACAG+TGG + chr1.2:73994824-73994843 None:intergenic 35.0%
CAGTTTATTAATCGAGAACG+TGG - chr1.2:73992845-73992864 MS.gene34072:intron 35.0%
CATCTTCGATCGAAAGATTT+GGG - chr1.2:73993137-73993156 MS.gene34072:intron 35.0%
CATGTTATTGGAAGACCTAT+TGG - chr1.2:73993820-73993839 MS.gene34072:CDS 35.0%
GACACTACTATCAGCATAAA+GGG + chr1.2:73995267-73995286 None:intergenic 35.0%
GCAGAAATTAGAAACAGCTT+CGG - chr1.2:73995130-73995149 MS.gene34072:CDS 35.0%
GGTTACGATATTTATAGGAG+TGG - chr1.2:73992866-73992885 MS.gene34072:intron 35.0%
GTAAAACATGACCTGTAAGT+TGG + chr1.2:73995396-73995415 None:intergenic 35.0%
GTGATATCCGAAAGTTCAAA+AGG + chr1.2:73994980-73994999 None:intergenic 35.0%
GTGTTCTCTGCTGAAAATAT+TGG - chr1.2:73993871-73993890 MS.gene34072:CDS 35.0%
GTTGCAAGCTCATTATGTTT+GGG + chr1.2:73994090-73994109 None:intergenic 35.0%
TCACATTTACCTACAAACAG+AGG + chr1.2:73995576-73995595 None:intergenic 35.0%
TCAGTTACTTGAGAGACATA+TGG - chr1.2:73993303-73993322 MS.gene34072:intron 35.0%
TCATCTTCGATCGAAAGATT+TGG - chr1.2:73993136-73993155 MS.gene34072:intron 35.0%
TGAATTCAATTCTGCAACTC+TGG - chr1.2:73994496-73994515 MS.gene34072:CDS 35.0%
TGACACTACTATCAGCATAA+AGG + chr1.2:73995268-73995287 None:intergenic 35.0%
TGCTGATATTGGCAATAACA+TGG - chr1.2:73994901-73994920 MS.gene34072:intron 35.0%
TGTTGCAAGCTCATTATGTT+TGG + chr1.2:73994091-73994110 None:intergenic 35.0%
TTACTTGAGAGACATATGGA+TGG - chr1.2:73993307-73993326 MS.gene34072:intron 35.0%
TTCCAATAACATGCGATTCA+GGG + chr1.2:73993813-73993832 None:intergenic 35.0%
! CACAGTTTTTCATCTGTTGT+GGG - chr1.2:73993763-73993782 MS.gene34072:CDS 35.0%
! TCACAGTTTTTCATCTGTTG+TGG - chr1.2:73993762-73993781 MS.gene34072:CDS 35.0%
! TCTTCTTTTGACAATAACGG+TGG + chr1.2:73993079-73993098 None:intergenic 35.0%
! TTGCCAAGTATAGATTTTGC+TGG - chr1.2:73994216-73994235 MS.gene34072:CDS 35.0%
! TTTTCTGATGCTTCACAACA+TGG - chr1.2:73994602-73994621 MS.gene34072:CDS 35.0%
!! CTTATTGGATGGGTTATGAT+TGG + chr1.2:73993441-73993460 None:intergenic 35.0%
!! TAATGCAGTACTGATCAGTA+TGG - chr1.2:73995092-73995111 MS.gene34072:CDS 35.0%
!! TATCCTGATTGCTTTTGTTG+TGG - chr1.2:73993404-73993423 MS.gene34072:CDS 35.0%
!!! TAATGATGGAGTTTTGACTG+AGG - chr1.2:73992982-73993001 MS.gene34072:CDS 35.0%
!!! TCTTTTGAAATCTAAGCTGC+AGG - chr1.2:73994002-73994021 MS.gene34072:intron 35.0%
AACACTTTGCTACCCATTTG+AGG + chr1.2:73993856-73993875 None:intergenic 40.0%
AACTGTGAGAATTTACACCG+TGG + chr1.2:73993750-73993769 None:intergenic 40.0%
AATTCCTCACTTCCTTCTCT+TGG - chr1.2:73994788-73994807 MS.gene34072:CDS 40.0%
ACAGGCAGAAGATGATTTGA+TGG - chr1.2:73993234-73993253 MS.gene34072:CDS 40.0%
AGACAAAGAGGACACCATAT+CGG + chr1.2:73993941-73993960 None:intergenic 40.0%
AGACCACAACAAAAGCAATC+AGG + chr1.2:73993410-73993429 None:intergenic 40.0%
ATATGGTGTCCTCTTTGTCT+GGG - chr1.2:73993941-73993960 MS.gene34072:CDS 40.0%
ATCTCAATGCCTCTGTTTGT+AGG - chr1.2:73995564-73995583 MS.gene34072:CDS 40.0%
ATGATGAGAAGTTCTATGGG+AGG - chr1.2:73994860-73994879 MS.gene34072:intron 40.0%
ATTGGAAGACCTATTGGATC+TGG - chr1.2:73993826-73993845 MS.gene34072:CDS 40.0%
CATGCCACTAGAAACAATAG+TGG + chr1.2:73995040-73995059 None:intergenic 40.0%
CCATACATTTGCAGACTAAG+AGG + chr1.2:73995418-73995437 None:intergenic 40.0%
CCTCTTAGTCTGCAAATGTA+TGG - chr1.2:73995415-73995434 MS.gene34072:CDS 40.0%
CGATCAAATGTGCATTCTTC+TGG - chr1.2:73994180-73994199 MS.gene34072:CDS 40.0%
CTTCCAATAACATGCGATTC+AGG + chr1.2:73993814-73993833 None:intergenic 40.0%
GATATCTGCTTTCCTGAATG+TGG + chr1.2:73994767-73994786 None:intergenic 40.0%
GGACACAATATAGATGCACT+GGG - chr1.2:73994458-73994477 MS.gene34072:CDS 40.0%
GTGTCTTCAAGTGTCCTATT+CGG + chr1.2:73992779-73992798 None:intergenic 40.0%
TAAGGTGGATGTGCAAACAT+TGG - chr1.2:73992748-73992767 MS.gene34072:intron 40.0%
TATTGGAAGAGTGACCATTG+TGG + chr1.2:73993906-73993925 None:intergenic 40.0%
TCACAACATGGAGACTTAGA+GGG - chr1.2:73994614-73994633 MS.gene34072:CDS 40.0%
TCCAATAACATGCGATTCAG+GGG + chr1.2:73993812-73993831 None:intergenic 40.0%
TCCCACTTCTTAGCAAATCT+GGG - chr1.2:73994693-73994712 MS.gene34072:CDS 40.0%
TGACATATTGCTGGACAAAG+CGG + chr1.2:73993608-73993627 None:intergenic 40.0%
TGATGAGAAGTTCTATGGGA+GGG - chr1.2:73994861-73994880 MS.gene34072:intron 40.0%
TGGACACAATATAGATGCAC+TGG - chr1.2:73994457-73994476 MS.gene34072:CDS 40.0%
TGGCCAGCAAAATCTATACT+TGG + chr1.2:73994222-73994241 None:intergenic 40.0%
TTATTTGGGAGTCAGCCATA+TGG - chr1.2:73994731-73994750 MS.gene34072:CDS 40.0%
TTCACAACATGGAGACTTAG+AGG - chr1.2:73994613-73994632 MS.gene34072:CDS 40.0%
TTCGGATATCACTGATCATG+TGG - chr1.2:73994988-73995007 MS.gene34072:intron 40.0%
TTGGCAATAACATGGAGAGT+AGG - chr1.2:73994909-73994928 MS.gene34072:intron 40.0%
! TAGGCATGAGTTGACGAATA+TGG + chr1.2:73995491-73995510 None:intergenic 40.0%
! TCTTTTGACAATAACGGTGG+TGG + chr1.2:73993076-73993095 None:intergenic 40.0%
!! AACATGACCTGTAAGTTGGT+TGG + chr1.2:73995392-73995411 None:intergenic 40.0%
!! ACCTCCACTATTGTTTCTAG+TGG - chr1.2:73995033-73995052 MS.gene34072:CDS 40.0%
!! AGAGGCATTGAGATTTGACA+AGG + chr1.2:73995558-73995577 None:intergenic 40.0%
!! ATCGCTATTTTCGATGCAAC+CGG - chr1.2:73993198-73993217 MS.gene34072:CDS 40.0%
!! ATTGGGTTGAGTAACCACAA+TGG - chr1.2:73993889-73993908 MS.gene34072:CDS 40.0%
!! CGGTACTGATAGTCAAAGAA+AGG - chr1.2:73995360-73995379 MS.gene34072:CDS 40.0%
!! TGTTTCTAGTGGCATGTCTT+TGG - chr1.2:73995044-73995063 MS.gene34072:CDS 40.0%
AAAGGTTTCAAGCTGGTGGT+GGG - chr1.2:73993113-73993132 MS.gene34072:intron 45.0%
AAGATTGGCGTGTTGCACAA+AGG - chr1.2:73993095-73993114 MS.gene34072:intron 45.0%
ACCCCTGAATCGCATGTTAT+TGG - chr1.2:73993808-73993827 MS.gene34072:CDS 45.0%
AGATCCAAGAGAAGGAAGTG+AGG + chr1.2:73994795-73994814 None:intergenic 45.0%
AGCGATGAACTATCACCGTT+CGG + chr1.2:73993184-73993203 None:intergenic 45.0%
AGCTCATGGCATGCTGATAT+TGG - chr1.2:73994890-73994909 MS.gene34072:intron 45.0%
ATCTCTACTCATCCCATGCA+TGG + chr1.2:73994564-73994583 None:intergenic 45.0%
ATGACAAGAATGCCAGGAAC+TGG - chr1.2:73993331-73993350 MS.gene34072:intron 45.0%
ATGGAACTAAGGAAAGCCAG+TGG - chr1.2:73993253-73993272 MS.gene34072:CDS 45.0%
ATGGAGACTTAGAGGGACTT+CGG - chr1.2:73994621-73994640 MS.gene34072:CDS 45.0%
CCAATGCTTGCAGCAAAGTT+CGG - chr1.2:73994532-73994551 MS.gene34072:CDS 45.0%
CCAGCAAGTCACAATGCATT+TGG - chr1.2:73993631-73993650 MS.gene34072:CDS 45.0%
CGATCGAAAGATTTGGGGAT+TGG - chr1.2:73993143-73993162 MS.gene34072:intron 45.0%
CGTGCATGAGGAATAATCTC+AGG + chr1.2:73995179-73995198 None:intergenic 45.0%
CTCCCACTTCTTAGCAAATC+TGG - chr1.2:73994692-73994711 MS.gene34072:CDS 45.0%
CTGATCATGTGGTACAGTTC+AGG - chr1.2:73994999-73995018 MS.gene34072:intron 45.0%
GAATTGGCCAACCAACTTAC+AGG - chr1.2:73995382-73995401 MS.gene34072:CDS 45.0%
GACATATTGCTGGACAAAGC+GGG + chr1.2:73993607-73993626 None:intergenic 45.0%
GAGATTATTCCTCATGCACG+TGG - chr1.2:73995179-73995198 MS.gene34072:CDS 45.0%
GATATGGTGTCCTCTTTGTC+TGG - chr1.2:73993940-73993959 MS.gene34072:CDS 45.0%
GATGCACTGGGAAATCAAGT+AGG - chr1.2:73994470-73994489 MS.gene34072:CDS 45.0%
GATGGTATGACAAGAATGCC+AGG - chr1.2:73993325-73993344 MS.gene34072:intron 45.0%
GCCACTAGAAACAATAGTGG+AGG + chr1.2:73995037-73995056 None:intergenic 45.0%
GCCTGTTGTACAGAAAATCC+CGG + chr1.2:73993220-73993239 None:intergenic 45.0%
GGATGAGATTCGATCACATC+CGG - chr1.2:73993003-73993022 MS.gene34072:CDS 45.0%
GGATTTCCAGATCCAAGAGA+AGG + chr1.2:73994803-73994822 None:intergenic 45.0%
GGTGATATAAGGAACTCGAC+TGG - chr1.2:73993652-73993671 MS.gene34072:CDS 45.0%
GTTCTTGAACTCATCGAGCA+AGG + chr1.2:73994945-73994964 None:intergenic 45.0%
GTTGCACAAAGGTTTCAAGC+TGG - chr1.2:73993106-73993125 MS.gene34072:intron 45.0%
TCACTTCCTTCTCTTGGATC+TGG - chr1.2:73994794-73994813 MS.gene34072:CDS 45.0%
TCGAAAGATTTGGGGATTGG+AGG - chr1.2:73993146-73993165 MS.gene34072:intron 45.0%
TGAGGAACTCCAGATCCAAT+AGG + chr1.2:73993838-73993857 None:intergenic 45.0%
TGGTTGCAGAGTGATTCAGA+AGG - chr1.2:73995435-73995454 MS.gene34072:CDS 45.0%
TGTGGCATTCCAAGACCATA+TGG + chr1.2:73994749-73994768 None:intergenic 45.0%
! AATAACGGTGGTGGTAACCT+AGG + chr1.2:73993067-73993086 None:intergenic 45.0%
! ACCGGGATTTTCTGTACAAC+AGG - chr1.2:73993216-73993235 MS.gene34072:CDS 45.0%
! CCAAATGCATTGTGACTTGC+TGG + chr1.2:73993634-73993653 None:intergenic 45.0%
! GAGGGATCGTTAAGTGCTTT+TGG - chr1.2:73992908-73992927 MS.gene34072:intron 45.0%
! GGATCTGGAGTTCCTCAAAT+GGG - chr1.2:73993841-73993860 MS.gene34072:CDS 45.0%
! GGCTTGATGACTGATGTCTT+TGG - chr1.2:73995200-73995219 MS.gene34072:CDS 45.0%
! TAACTGAGTTGAACTCTGCC+TGG + chr1.2:73993290-73993309 None:intergenic 45.0%
! TGGATCTGGAGTTCCTCAAA+TGG - chr1.2:73993840-73993859 MS.gene34072:CDS 45.0%
!! AGCCCAGATTTGCTAAGAAG+TGG + chr1.2:73994698-73994717 None:intergenic 45.0%
!! CGCATGAGAGCATTAATCCT+AGG - chr1.2:73993047-73993066 MS.gene34072:CDS 45.0%
!! GCAAGCATTGGATGATACGT+GGG + chr1.2:73994523-73994542 None:intergenic 45.0%
!! GCCCAGATTTGCTAAGAAGT+GGG + chr1.2:73994697-73994716 None:intergenic 45.0%
!! TCGCTATTTTCGATGCAACC+GGG - chr1.2:73993199-73993218 MS.gene34072:CDS 45.0%
!! TGCAAGCATTGGATGATACG+TGG + chr1.2:73994524-73994543 None:intergenic 45.0%
AGAAGTTCTATGGGAGGGTC+TGG - chr1.2:73994866-73994885 MS.gene34072:intron 50.0%
AGACACATTGCAGAGTGAGC+TGG - chr1.2:73992793-73992812 MS.gene34072:intron 50.0%
AGGAAGAATGCAACCCCGAA+CGG - chr1.2:73993166-73993185 MS.gene34072:intron 50.0%
ATCGGCGAGATCGGTCATAT+TGG + chr1.2:73993923-73993942 None:intergenic 50.0%
CAAAGGTTTCAAGCTGGTGG+TGG - chr1.2:73993112-73993131 MS.gene34072:intron 50.0%
CAGGATATGCACCAGGAACT+TGG + chr1.2:73994242-73994261 None:intergenic 50.0%
CATTGCAGAGTGAGCTGGAA+AGG - chr1.2:73992798-73992817 MS.gene34072:intron 50.0%
CCGAACTTTGCTGCAAGCAT+TGG + chr1.2:73994535-73994554 None:intergenic 50.0%
CGATGAACTATCACCGTTCG+GGG + chr1.2:73993182-73993201 None:intergenic 50.0%
CTTAACGATCCCTCGACTGT+TGG + chr1.2:73992902-73992921 None:intergenic 50.0%
GCACAAAGGTTTCAAGCTGG+TGG - chr1.2:73993109-73993128 MS.gene34072:intron 50.0%
GCGATGAACTATCACCGTTC+GGG + chr1.2:73993183-73993202 None:intergenic 50.0%
GGTCTTGGAATGCCACATTC+AGG - chr1.2:73994752-73994771 MS.gene34072:CDS 50.0%
GTGTTTGCAGGATATGCACC+AGG + chr1.2:73994249-73994268 None:intergenic 50.0%
TATGACCGATCTCGCCGATA+TGG - chr1.2:73993924-73993943 MS.gene34072:CDS 50.0%
TCTCTACGACTCCTCAAAGC+TGG + chr1.2:73994437-73994456 None:intergenic 50.0%
TGCTGGACGTGACATATTGC+TGG + chr1.2:73993617-73993636 None:intergenic 50.0%
TTGGTCGGACTTCAGAACCA+CGG - chr1.2:73993730-73993749 MS.gene34072:CDS 50.0%
! AGAATGCCAGGAACTGGTCT+TGG - chr1.2:73993337-73993356 MS.gene34072:intron 50.0%
! AGTTCGGAGTACTCCATGCA+TGG - chr1.2:73994548-73994567 MS.gene34072:CDS 50.0%
! GATTTTGCTGGCCAAGTTCC+TGG - chr1.2:73994228-73994247 MS.gene34072:CDS 50.0%
! GTTCGGAGTACTCCATGCAT+GGG - chr1.2:73994549-73994568 MS.gene34072:CDS 50.0%
! TCTGAAGTCCGACCAAACCT+GGG + chr1.2:73993726-73993745 None:intergenic 50.0%
!! GCTTTGAGGAGTCGTAGAGA+TGG - chr1.2:73994437-73994456 MS.gene34072:CDS 50.0%
!! TTCTGAAGTCCGACCAAACC+TGG + chr1.2:73993727-73993746 None:intergenic 50.0%
AACGATCCCTCGACTGTTGG+AGG + chr1.2:73992899-73992918 None:intergenic 55.0%
ATCAGCCTCTACCCCAGGTT+TGG - chr1.2:73993711-73993730 MS.gene34072:CDS 55.0%
CACATCCACCTTACTCCCAC+CGG + chr1.2:73992741-73992760 None:intergenic 55.0%
CCAGTGGACGAAATCTCTCC+AGG - chr1.2:73993269-73993288 MS.gene34072:CDS 55.0%
CCTGGAGAGATTTCGTCCAC+TGG + chr1.2:73993272-73993291 None:intergenic 55.0%
CTGAAGTCCGACCAAACCTG+GGG + chr1.2:73993725-73993744 None:intergenic 55.0%
GGACACCATATCGGCGAGAT+CGG + chr1.2:73993932-73993951 None:intergenic 55.0%
GGGAGTCAGCCATATGGTCT+TGG - chr1.2:73994737-73994756 MS.gene34072:CDS 55.0%
GTCATCAAGCCACGTGCATG+AGG + chr1.2:73995191-73995210 None:intergenic 55.0%
TGATGAACGCAACCCCTCCA+GGG + chr1.2:73993695-73993714 None:intergenic 55.0%
AAGTGCGCCTCCAACAGTCG+AGG - chr1.2:73992889-73992908 MS.gene34072:intron 60.0%
AGTGCGCCTCCAACAGTCGA+GGG - chr1.2:73992890-73992909 MS.gene34072:intron 60.0%
CACTGTTGATCGTGAGCCCC+TGG - chr1.2:73993675-73993694 MS.gene34072:CDS 60.0%
CGTTCATCAGCCTCTACCCC+AGG - chr1.2:73993706-73993725 MS.gene34072:CDS 60.0%
CTCGCACCAAGACCAGTTCC+TGG + chr1.2:73993346-73993365 None:intergenic 60.0%
CTGATGAACGCAACCCCTCC+AGG + chr1.2:73993696-73993715 None:intergenic 60.0%
GATGAACGCAACCCCTCCAG+GGG + chr1.2:73993694-73993713 None:intergenic 60.0%
GTTGATCGTGAGCCCCTGGA+GGG - chr1.2:73993679-73993698 MS.gene34072:CDS 60.0%
TCCGACCAAACCTGGGGTAG+AGG + chr1.2:73993719-73993738 None:intergenic 60.0%
TGTTGATCGTGAGCCCCTGG+AGG - chr1.2:73993678-73993697 MS.gene34072:CDS 60.0%
TTGATCGTGAGCCCCTGGAG+GGG - chr1.2:73993680-73993699 MS.gene34072:CDS 60.0%
! GCCTCTACCCCAGGTTTGGT+CGG - chr1.2:73993715-73993734 MS.gene34072:CDS 60.0%
TGGGAGGGTCTGGCAGCTCA+TGG - chr1.2:73994876-73994895 MS.gene34072:intron 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 73992734 73995687 73992734 ID=MS.gene34072
chr1.2 mRNA 73992734 73995687 73992734 ID=MS.gene34072.t1;Parent=MS.gene34072
chr1.2 exon 73995028 73995687 73995028 ID=MS.gene34072.t1.exon1;Parent=MS.gene34072.t1
chr1.2 CDS 73995028 73995687 73995028 ID=cds.MS.gene34072.t1;Parent=MS.gene34072.t1
chr1.2 exon 73994115 73994832 73994115 ID=MS.gene34072.t1.exon2;Parent=MS.gene34072.t1
chr1.2 CDS 73994115 73994832 73994115 ID=cds.MS.gene34072.t1;Parent=MS.gene34072.t1
chr1.2 exon 73993401 73993983 73993401 ID=MS.gene34072.t1.exon3;Parent=MS.gene34072.t1
chr1.2 CDS 73993401 73993983 73993401 ID=cds.MS.gene34072.t1;Parent=MS.gene34072.t1
chr1.2 exon 73993180 73993321 73993180 ID=MS.gene34072.t1.exon4;Parent=MS.gene34072.t1
chr1.2 CDS 73993180 73993321 73993180 ID=cds.MS.gene34072.t1;Parent=MS.gene34072.t1
chr1.2 exon 73992965 73993072 73992965 ID=MS.gene34072.t1.exon5;Parent=MS.gene34072.t1
chr1.2 CDS 73992965 73993072 73992965 ID=cds.MS.gene34072.t1;Parent=MS.gene34072.t1
chr1.2 exon 73992734 73992751 73992734 ID=MS.gene34072.t1.exon6;Parent=MS.gene34072.t1
chr1.2 CDS 73992734 73992751 73992734 ID=cds.MS.gene34072.t1;Parent=MS.gene34072.t1
Gene Sequence

>MS.gene34072

ATGGCCGGTGGGAGTAAGGTGGATGTGCAAACATTGGATTTACCGAATAGGACACTTGAAGACACATTGCAGAGTGAGCTGGAAAGGATATTGCAAGAGCAGCGCAATCAACAGTTTATTAATCGAGAACGTGGTTACGATATTTATAGGAGTGGAAGTGCGCCTCCAACAGTCGAGGGATCGTTAAGTGCTTTTGGTAGTTTGAGAAACTTCGATTACAGAGCTAATAATAGCGGGAAGAGTAATAATAATGATGGAGTTTTGACTGAGGATGAGATTCGATCACATCCGGCTTATCTTTCGTATTATTACTCGCATGAGAGCATTAATCCTAGGTTACCACCACCGTTATTGTCAAAAGAAGATTGGCGTGTTGCACAAAGGTTTCAAGCTGGTGGTGGGTCATCTTCGATCGAAAGATTTGGGGATTGGAGGAAGAATGCAACCCCGAACGGTGATAGTTCATCGCTATTTTCGATGCAACCGGGATTTTCTGTACAACAGGCAGAAGATGATTTGATGGAACTAAGGAAAGCCAGTGGACGAAATCTCTCCAGGCAGAGTTCAACTCAGTTACTTGAGAGACATATGGATGGTATGACAAGAATGCCAGGAACTGGTCTTGGTGCGAGAAAGACATGTTATTCAGACATTTTTCAGGTTATTCATTTATCCTGATTGCTTTTGTTGTGGTCTTGATTTTTCCAATCATAACCCATCCAATAAGATGAAAAAAATAAATTCACTTTCATAATTTAAAGCAAATAAATTGATAAAGTTGATCCTATTTATTGCTTGTATTATTCTACCATTAGCATTTTATTACACTTATATTTGAAGTTAATGTTTTAGCAGGATGGATTTGATCAACCCGCTTTGTCCAGCAATATGTCACGTCCAGCAAGTCACAATGCATTTGGTGATATAAGGAACTCGACTGGCACTGTTGATCGTGAGCCCCTGGAGGGGTTGCGTTCATCAGCCTCTACCCCAGGTTTGGTCGGACTTCAGAACCACGGTGTAAATTCTCACAGTTTTTCATCTGTTGTGGGTTCTTCTTTGTCAAGATCGACGACCCCTGAATCGCATGTTATTGGAAGACCTATTGGATCTGGAGTTCCTCAAATGGGTAGCAAAGTGTTCTCTGCTGAAAATATTGGGTTGAGTAACCACAATGGTCACTCTTCCAATATGACCGATCTCGCCGATATGGTGTCCTCTTTGTCTGGGTTAAATTTATCAGGTGTTAGACGTGCAGAACAAGATAGTCTTTTGAAATCTAAGCTGCAGGTTGAAGTTGATAATCATGCTAATGCTAATGTTATGTTGAGCACACCAAACAATGTTAATTTGCCCAAACATAATGAGCTTGCAACAGACCTTAACACATTTAGTTTGAATGAAAGAGTCAATCTACTGAAAAAAACTGCTTCTTATGCTAATCTTCGATCAAATGTGCATTCTTCTGGAAACTTAACAAGTTTGCCAAGTATAGATTTTGCTGGCCAAGTTCCTGGTGCATATCCTGCAAACACAACATTGAATAATGTGTACAATAATCATCTTGAGACAGGTCTCCTCTCTCTCTCTCTTTTTTTGTGTGTGTGTGAGCGCGCGCGCTTAAATATGTTTGAGTGAATTAGTTTAAGCTCAGTGAAGTTTAGTGTTATTAGTTGGACCTAACTGTTCATTATTCATTTCCAGCTTTGAGGAGTCGTAGAGATGGACACAATATAGATGCACTGGGAAATCAAGTAGGTTCTGAATTCAATTCTGCAACTCTGGACCCACGTATCATCCAATGCTTGCAGCAAAGTTCGGAGTACTCCATGCATGGGATGAGTAGAGATCCTTTTCAAATGAGAAATTTTTCTGATGCTTCACAACATGGAGACTTAGAGGGACTTCGGAAAGCATATCTCGAGACTCTTCTTAGTCAACAAAAGCAACAGTATGAACTCCCACTTCTTAGCAAATCTGGGCTTCTTAATCAAGGGTTATTTGGGAGTCAGCCATATGGTCTTGGAATGCCACATTCAGGAAAGCAGATATCAAATTCCTCACTTCCTTCTCTTGGATCTGGAAATCCACTGTTTGAGAATGAACGAATCTCACACATAAATTCTATGATGAGAAGTTCTATGGGAGGGTCTGGCAGCTCATGGCATGCTGATATTGGCAATAACATGGAGAGTAGGTTTGCTTCATCCTTGCTCGATGAGTTCAAGAACAACAAAACCAAACCTTTTGAACTTTCGGATATCACTGATCATGTGGTACAGTTCAGGTATGATTTTGAACCTCCACTATTGTTTCTAGTGGCATGTCTTTGGAAATCTGAATTGATAATATATGCTATAATGCAGTACTGATCAGTATGGTAGCCGCTTTATTCAGCAGAAATTAGAAACAGCTTCGGTAGAAGAGAAGACCAAGATATTTCCTGAGATTATTCCTCATGCACGTGGCTTGATGACTGATGTCTTTGGCAATTATGTCATACAGAAAGTATATTTAGCTTCTTTTTTTTCCCTTTATGCTGATAGTAGTGTCATAAATATGCTCTTTTTATTTGGATTGTTAGAATTTCACACTTTGTCATTGCAATATTACAGTTTTTTGAGCACGGTACTGATAGTCAAAGAAAGGAATTGGCCAACCAACTTACAGGTCATGTTTTACCTCTTAGTCTGCAAATGTATGGTTGCAGAGTGATTCAGAAGGTGCATTTTAAGCTTATATTCTCAAATAACTCCATATTCGTCAACTCATGCCTAACTCTTAAAATCCGATATATTTTTGTATAAGATGGTCTGTTTTTCCTTGTCAAATCTCAATGCCTCTGTTTGTAGGTAAATGTGACCTCTTTTTTGTATATCAAACATGATTATTTTTGTAGACAACTTGTTGATGTATAGCACATTTTTTTTTTTTAGATGCGAGCAGGTTGTTAA
Protein sequence

>MS.gene34072.t1

MAGGSKVDVQTLDLPNRTLEDTLQSELERILQEQRNQQFINRERGYDIYRSGSAPPTVEGSLSAFGSLRNFDYRANNSGKSNNNDGVLTEDEIRSHPAYLSYYYSHESINPRLPPPLLSKEDWRVAQRFQAGGGSSSIERFGDWRKNATPNGDSSSLFSMQPGFSVQQAEDDLMELRKASGRNLSRQSSTQLLERHMDGMTRMPGTGLGARKTCYSDIFQDGFDQPALSSNMSRPASHNAFGDIRNSTGTVDREPLEGLRSSASTPGLVGLQNHGVNSHSFSSVVGSSLSRSTTPESHVIGRPIGSGVPQMGSKVFSAENIGLSNHNGHSSNMTDLADMVSSLSGLNLSGVRRAEQDSLLKSKLQVEVDNHANANVMLSTPNNVNLPKHNELATDLNTFSLNERVNLLKKTASYANLRSNVHSSGNLTSLPSIDFAGQVPGAYPANTTLNNVYNNHLETALRSRRDGHNIDALGNQVGSEFNSATLDPRIIQCLQQSSEYSMHGMSRDPFQMRNFSDASQHGDLEGLRKAYLETLLSQQKQQYELPLLSKSGLLNQGLFGSQPYGLGMPHSGKQISNSSLPSLGSGNPLFENERISHINSMMRSSMGGSGSSWHADIGNNMESRFASSLLDEFKNNKTKPFELSDITDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEIIPHARGLMTDVFGNYVIQKFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKMRAGC