Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34258.t1 | XP_013445523.1 | 97.8 | 417 | 9 | 0 | 1 | 417 | 1 | 417 | 4.40E-248 | 866.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34258.t1 | Q1PFD9 | 69.2 | 416 | 123 | 2 | 2 | 416 | 1 | 412 | 1.5e-180 | 633.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34258.t1 | A0A072TPV7 | 97.8 | 417 | 9 | 0 | 1 | 417 | 1 | 417 | 3.2e-248 | 866.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene34258 | MS.gene065718 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34258.t1 | MTR_8g463790 | 97.842 | 417 | 9 | 0 | 1 | 417 | 1 | 417 | 0.0 | 856 |
MS.gene34258.t1 | MTR_3g070900 | 50.704 | 355 | 166 | 4 | 60 | 409 | 99 | 449 | 2.14e-130 | 383 |
MS.gene34258.t1 | MTR_5g083260 | 50.143 | 349 | 169 | 3 | 66 | 410 | 78 | 425 | 8.88e-130 | 380 |
MS.gene34258.t1 | MTR_4g014440 | 47.132 | 401 | 191 | 7 | 18 | 410 | 21 | 408 | 7.56e-128 | 375 |
MS.gene34258.t1 | MTR_4g016940 | 48.725 | 353 | 173 | 3 | 64 | 409 | 76 | 427 | 3.83e-127 | 374 |
MS.gene34258.t1 | MTR_7g068920 | 49.008 | 353 | 172 | 3 | 64 | 409 | 70 | 421 | 2.29e-123 | 364 |
MS.gene34258.t1 | MTR_3g071650 | 49.419 | 344 | 169 | 3 | 71 | 410 | 89 | 431 | 2.75e-123 | 364 |
MS.gene34258.t1 | MTR_4g014430 | 49.415 | 342 | 171 | 2 | 69 | 409 | 106 | 446 | 3.05e-123 | 365 |
MS.gene34258.t1 | MTR_7g070060 | 44.146 | 410 | 207 | 8 | 12 | 410 | 12 | 410 | 1.91e-120 | 356 |
MS.gene34258.t1 | MTR_5g082880 | 45.714 | 350 | 182 | 4 | 69 | 410 | 163 | 512 | 1.83e-115 | 347 |
MS.gene34258.t1 | MTR_7g070060 | 46.284 | 296 | 148 | 6 | 124 | 410 | 15 | 308 | 1.75e-92 | 281 |
MS.gene34258.t1 | MTR_1g050448 | 42.566 | 343 | 173 | 9 | 71 | 409 | 53 | 375 | 8.60e-85 | 264 |
MS.gene34258.t1 | MTR_1g112210 | 39.766 | 342 | 185 | 8 | 71 | 409 | 59 | 382 | 2.24e-82 | 258 |
MS.gene34258.t1 | MTR_3g464570 | 38.040 | 347 | 196 | 6 | 71 | 410 | 43 | 377 | 1.95e-81 | 255 |
MS.gene34258.t1 | MTR_1g112210 | 39.181 | 342 | 174 | 9 | 71 | 409 | 59 | 369 | 7.03e-79 | 248 |
MS.gene34258.t1 | MTR_7g070060 | 42.857 | 294 | 150 | 6 | 12 | 297 | 12 | 295 | 8.91e-79 | 246 |
MS.gene34258.t1 | MTR_3g049330 | 37.249 | 349 | 186 | 7 | 68 | 409 | 28 | 350 | 1.72e-78 | 247 |
MS.gene34258.t1 | MTR_5g071350 | 35.165 | 364 | 209 | 8 | 62 | 410 | 49 | 400 | 1.11e-77 | 246 |
MS.gene34258.t1 | MTR_7g093450 | 35.876 | 354 | 200 | 8 | 71 | 410 | 248 | 588 | 6.94e-75 | 244 |
MS.gene34258.t1 | MTR_4g121560 | 34.699 | 366 | 200 | 8 | 71 | 416 | 114 | 460 | 1.18e-74 | 240 |
MS.gene34258.t1 | MTR_0136s0010 | 35.593 | 354 | 201 | 8 | 71 | 410 | 170 | 510 | 1.73e-74 | 241 |
MS.gene34258.t1 | MTR_2g073510 | 37.830 | 341 | 184 | 8 | 71 | 406 | 33 | 350 | 8.80e-74 | 234 |
MS.gene34258.t1 | MTR_7g094750 | 36.639 | 363 | 193 | 12 | 69 | 411 | 89 | 434 | 1.55e-73 | 237 |
MS.gene34258.t1 | MTR_5g033800 | 35.054 | 368 | 203 | 9 | 62 | 411 | 136 | 485 | 2.06e-73 | 238 |
MS.gene34258.t1 | MTR_4g079700 | 35.714 | 350 | 189 | 10 | 67 | 409 | 43 | 363 | 2.61e-73 | 234 |
MS.gene34258.t1 | MTR_2g022560 | 39.726 | 365 | 186 | 14 | 65 | 411 | 91 | 439 | 2.81e-73 | 236 |
MS.gene34258.t1 | MTR_4g126950 | 35.613 | 351 | 201 | 11 | 71 | 409 | 109 | 446 | 2.27e-72 | 234 |
MS.gene34258.t1 | MTR_3g035830 | 37.143 | 350 | 187 | 8 | 64 | 407 | 24 | 346 | 7.01e-72 | 229 |
MS.gene34258.t1 | MTR_3g021090 | 37.318 | 343 | 182 | 8 | 69 | 405 | 29 | 344 | 5.76e-71 | 229 |
MS.gene34258.t1 | MTR_2g015720 | 36.176 | 387 | 210 | 10 | 27 | 409 | 5 | 358 | 6.79e-71 | 227 |
MS.gene34258.t1 | MTR_7g109550 | 34.174 | 357 | 191 | 9 | 71 | 409 | 137 | 467 | 8.18e-71 | 231 |
MS.gene34258.t1 | MTR_2g091175 | 35.897 | 351 | 195 | 10 | 64 | 410 | 43 | 367 | 2.68e-70 | 226 |
MS.gene34258.t1 | MTR_4g088030 | 34.971 | 346 | 198 | 8 | 68 | 410 | 30 | 351 | 9.85e-69 | 221 |
MS.gene34258.t1 | MTR_5g034810 | 36.932 | 352 | 187 | 8 | 68 | 412 | 32 | 355 | 8.02e-68 | 219 |
MS.gene34258.t1 | MTR_5g059400 | 32.044 | 362 | 226 | 9 | 60 | 410 | 164 | 516 | 2.10e-67 | 223 |
MS.gene34258.t1 | MTR_1g116130 | 32.044 | 362 | 226 | 9 | 60 | 410 | 164 | 516 | 2.10e-67 | 223 |
MS.gene34258.t1 | MTR_1g111010 | 33.623 | 345 | 194 | 9 | 71 | 412 | 32 | 344 | 4.67e-67 | 217 |
MS.gene34258.t1 | MTR_3g021060 | 35.244 | 349 | 195 | 8 | 64 | 407 | 39 | 361 | 5.00e-67 | 218 |
MS.gene34258.t1 | MTR_4g087730 | 35.028 | 354 | 201 | 9 | 61 | 409 | 33 | 362 | 3.40e-66 | 215 |
MS.gene34258.t1 | MTR_8g069790 | 34.078 | 358 | 206 | 10 | 69 | 411 | 176 | 518 | 5.88e-66 | 219 |
MS.gene34258.t1 | MTR_1g058380 | 36.119 | 371 | 194 | 12 | 69 | 417 | 53 | 402 | 9.07e-66 | 216 |
MS.gene34258.t1 | MTR_2g073500 | 32.773 | 357 | 196 | 10 | 67 | 412 | 25 | 348 | 1.06e-64 | 211 |
MS.gene34258.t1 | MTR_3g090120 | 32.520 | 369 | 209 | 9 | 59 | 411 | 117 | 461 | 3.91e-61 | 205 |
MS.gene34258.t1 | MTR_3g464570 | 37.234 | 282 | 159 | 5 | 136 | 410 | 3 | 273 | 4.15e-60 | 197 |
MS.gene34258.t1 | MTR_8g093530 | 32.231 | 363 | 208 | 10 | 65 | 414 | 84 | 421 | 1.33e-58 | 197 |
MS.gene34258.t1 | MTR_7g094750 | 35.950 | 242 | 140 | 7 | 69 | 298 | 89 | 327 | 1.33e-48 | 168 |
MS.gene34258.t1 | MTR_5g033800 | 33.865 | 251 | 145 | 5 | 62 | 298 | 136 | 379 | 1.00e-46 | 165 |
MS.gene34258.t1 | MTR_6g061710 | 29.058 | 382 | 214 | 13 | 67 | 415 | 163 | 520 | 6.60e-46 | 166 |
MS.gene34258.t1 | MTR_1g076690 | 28.496 | 379 | 224 | 15 | 67 | 417 | 219 | 578 | 2.83e-44 | 162 |
MS.gene34258.t1 | MTR_6g016880 | 28.404 | 426 | 243 | 15 | 14 | 409 | 26 | 419 | 2.72e-41 | 151 |
MS.gene34258.t1 | MTR_8g027900 | 30.278 | 360 | 215 | 13 | 71 | 409 | 211 | 555 | 3.95e-41 | 153 |
MS.gene34258.t1 | MTR_8g104970 | 28.723 | 376 | 222 | 11 | 68 | 417 | 117 | 472 | 8.87e-40 | 148 |
MS.gene34258.t1 | MTR_6g016875 | 27.809 | 356 | 225 | 11 | 69 | 405 | 62 | 404 | 2.04e-39 | 146 |
MS.gene34258.t1 | MTR_7g033230 | 28.689 | 366 | 232 | 13 | 64 | 411 | 257 | 611 | 2.51e-39 | 149 |
MS.gene34258.t1 | MTR_7g019120 | 26.328 | 433 | 275 | 11 | 1 | 409 | 8 | 420 | 3.01e-39 | 146 |
MS.gene34258.t1 | MTR_7g033230 | 28.689 | 366 | 232 | 13 | 64 | 411 | 327 | 681 | 5.49e-39 | 149 |
MS.gene34258.t1 | MTR_2g016060 | 29.640 | 361 | 207 | 16 | 72 | 405 | 56 | 396 | 1.21e-37 | 141 |
MS.gene34258.t1 | MTR_5g035150 | 27.123 | 424 | 241 | 17 | 18 | 405 | 36 | 427 | 1.27e-37 | 142 |
MS.gene34258.t1 | MTR_5g035080 | 28.267 | 375 | 214 | 14 | 68 | 411 | 72 | 422 | 1.33e-37 | 141 |
MS.gene34258.t1 | MTR_8g093870 | 28.926 | 363 | 215 | 12 | 69 | 409 | 131 | 472 | 2.72e-37 | 141 |
MS.gene34258.t1 | MTR_3g109840 | 28.065 | 367 | 222 | 12 | 68 | 411 | 70 | 417 | 3.63e-37 | 140 |
MS.gene34258.t1 | MTR_8g099300 | 29.396 | 364 | 206 | 16 | 71 | 405 | 74 | 415 | 5.70e-36 | 137 |
MS.gene34258.t1 | MTR_4g092830 | 28.261 | 368 | 220 | 16 | 71 | 413 | 48 | 396 | 8.96e-36 | 136 |
MS.gene34258.t1 | MTR_5g035090 | 28.686 | 373 | 208 | 12 | 71 | 411 | 83 | 429 | 8.01e-35 | 134 |
MS.gene34258.t1 | MTR_5g035070 | 27.151 | 372 | 217 | 11 | 71 | 411 | 87 | 435 | 2.64e-33 | 130 |
MS.gene34258.t1 | MTR_4g125060 | 27.225 | 382 | 197 | 15 | 69 | 409 | 130 | 471 | 3.44e-32 | 127 |
MS.gene34258.t1 | MTR_4g125060 | 27.225 | 382 | 197 | 15 | 69 | 409 | 169 | 510 | 7.73e-32 | 127 |
MS.gene34258.t1 | MTR_4g125060 | 27.835 | 388 | 187 | 16 | 69 | 409 | 198 | 539 | 8.00e-32 | 127 |
MS.gene34258.t1 | MTR_6g016240 | 25.737 | 373 | 220 | 15 | 69 | 409 | 69 | 416 | 1.27e-28 | 116 |
MS.gene34258.t1 | MTR_6g007777 | 23.978 | 367 | 238 | 13 | 65 | 409 | 110 | 457 | 1.14e-27 | 114 |
MS.gene34258.t1 | MTR_5g069320 | 25.749 | 334 | 164 | 12 | 90 | 402 | 116 | 386 | 9.80e-26 | 107 |
MS.gene34258.t1 | MTR_7g019140 | 33.333 | 165 | 106 | 3 | 1 | 163 | 8 | 170 | 2.00e-25 | 102 |
MS.gene34258.t1 | MTR_5g035120 | 33.140 | 172 | 98 | 4 | 1 | 162 | 1 | 165 | 2.95e-23 | 96.3 |
MS.gene34258.t1 | MTR_2g022580 | 32.540 | 126 | 76 | 3 | 132 | 249 | 2 | 126 | 3.18e-15 | 72.4 |
MS.gene34258.t1 | MTR_3g021150 | 37.736 | 106 | 58 | 2 | 265 | 367 | 6 | 106 | 6.64e-15 | 71.2 |
MS.gene34258.t1 | MTR_5g035140 | 25.197 | 254 | 144 | 9 | 186 | 411 | 32 | 267 | 4.77e-13 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34258.t1 | AT1G73140 | 69.231 | 416 | 123 | 2 | 2 | 416 | 1 | 412 | 0.0 | 615 |
MS.gene34258.t1 | AT5G01360 | 49.311 | 363 | 177 | 2 | 54 | 409 | 16 | 378 | 1.28e-133 | 389 |
MS.gene34258.t1 | AT5G01360 | 49.311 | 363 | 177 | 2 | 54 | 409 | 72 | 434 | 4.40e-133 | 389 |
MS.gene34258.t1 | AT2G40150 | 50.139 | 361 | 165 | 3 | 60 | 409 | 64 | 420 | 1.82e-132 | 387 |
MS.gene34258.t1 | AT3G55990 | 50.144 | 347 | 168 | 2 | 69 | 410 | 138 | 484 | 7.84e-131 | 385 |
MS.gene34258.t1 | AT2G40320 | 48.711 | 349 | 174 | 2 | 66 | 410 | 76 | 423 | 1.35e-123 | 365 |
MS.gene34258.t1 | AT3G11030 | 48.286 | 350 | 175 | 4 | 66 | 410 | 101 | 449 | 5.51e-120 | 357 |
MS.gene34258.t1 | AT5G01620 | 46.398 | 347 | 177 | 4 | 68 | 409 | 107 | 449 | 1.58e-119 | 355 |
MS.gene34258.t1 | AT5G01620 | 46.398 | 347 | 177 | 4 | 68 | 409 | 107 | 449 | 1.58e-119 | 355 |
MS.gene34258.t1 | AT5G01620 | 46.398 | 347 | 177 | 4 | 68 | 409 | 115 | 457 | 1.83e-119 | 355 |
MS.gene34258.t1 | AT2G38320 | 44.340 | 424 | 202 | 8 | 1 | 413 | 8 | 408 | 2.33e-118 | 351 |
MS.gene34258.t1 | AT2G40160 | 41.509 | 424 | 231 | 5 | 4 | 410 | 1 | 424 | 2.03e-117 | 349 |
MS.gene34258.t1 | AT2G40160 | 41.509 | 424 | 231 | 5 | 4 | 410 | 1 | 424 | 2.24e-117 | 350 |
MS.gene34258.t1 | AT2G38320 | 46.789 | 327 | 163 | 5 | 96 | 413 | 1 | 325 | 3.67e-100 | 301 |
MS.gene34258.t1 | AT3G54260 | 39.420 | 345 | 188 | 7 | 71 | 412 | 51 | 377 | 4.41e-82 | 257 |
MS.gene34258.t1 | AT2G30900 | 38.040 | 347 | 185 | 10 | 71 | 410 | 43 | 366 | 5.35e-81 | 254 |
MS.gene34258.t1 | AT2G40160 | 40.514 | 311 | 169 | 4 | 4 | 298 | 1 | 311 | 1.61e-79 | 248 |
MS.gene34258.t1 | AT3G62390 | 37.500 | 360 | 193 | 11 | 64 | 410 | 132 | 472 | 3.53e-79 | 253 |
MS.gene34258.t1 | AT5G20590 | 36.441 | 354 | 199 | 9 | 70 | 410 | 140 | 480 | 7.34e-79 | 252 |
MS.gene34258.t1 | AT5G58600 | 36.888 | 347 | 201 | 6 | 71 | 410 | 66 | 401 | 2.07e-77 | 246 |
MS.gene34258.t1 | AT3G12060 | 37.921 | 356 | 194 | 9 | 69 | 410 | 194 | 536 | 3.93e-77 | 249 |
MS.gene34258.t1 | AT1G78710 | 35.465 | 344 | 194 | 9 | 71 | 410 | 38 | 357 | 3.70e-76 | 241 |
MS.gene34258.t1 | AT1G29050 | 35.262 | 363 | 205 | 8 | 50 | 409 | 43 | 378 | 5.29e-75 | 239 |
MS.gene34258.t1 | AT5G06700 | 37.394 | 353 | 198 | 10 | 69 | 409 | 253 | 594 | 4.07e-74 | 243 |
MS.gene34258.t1 | AT2G31110 | 38.304 | 342 | 184 | 8 | 71 | 409 | 45 | 362 | 4.25e-74 | 236 |
MS.gene34258.t1 | AT2G34070 | 34.278 | 353 | 204 | 7 | 61 | 409 | 55 | 383 | 8.91e-74 | 236 |
MS.gene34258.t1 | AT5G49340 | 36.639 | 363 | 187 | 10 | 71 | 410 | 100 | 442 | 5.94e-73 | 236 |
MS.gene34258.t1 | AT3G06080 | 36.975 | 357 | 199 | 8 | 70 | 411 | 102 | 447 | 1.20e-72 | 235 |
MS.gene34258.t1 | AT2G30010 | 33.867 | 375 | 208 | 10 | 56 | 410 | 43 | 397 | 3.65e-69 | 224 |
MS.gene34258.t1 | AT2G30010 | 33.867 | 375 | 208 | 10 | 56 | 410 | 86 | 440 | 5.49e-69 | 225 |
MS.gene34258.t1 | AT1G60790 | 33.938 | 386 | 216 | 12 | 52 | 411 | 162 | 534 | 5.52e-69 | 228 |
MS.gene34258.t1 | AT2G42570 | 37.391 | 345 | 185 | 9 | 71 | 410 | 47 | 365 | 1.33e-68 | 222 |
MS.gene34258.t1 | AT3G14850 | 34.582 | 347 | 201 | 8 | 69 | 411 | 32 | 356 | 2.15e-68 | 221 |
MS.gene34258.t1 | AT5G19160 | 33.967 | 368 | 209 | 10 | 70 | 417 | 98 | 451 | 4.88e-68 | 223 |
MS.gene34258.t1 | AT5G06230 | 35.246 | 366 | 207 | 8 | 67 | 414 | 17 | 370 | 1.02e-58 | 196 |
MS.gene34258.t1 | AT5G06230 | 35.246 | 366 | 207 | 8 | 67 | 414 | 58 | 411 | 2.61e-58 | 196 |
MS.gene34258.t1 | AT1G48880 | 32.113 | 355 | 199 | 13 | 71 | 411 | 115 | 441 | 7.34e-58 | 196 |
MS.gene34258.t1 | AT1G78710 | 30.294 | 340 | 164 | 8 | 71 | 410 | 31 | 297 | 2.85e-56 | 187 |
MS.gene34258.t1 | AT3G11570 | 34.000 | 350 | 186 | 12 | 88 | 414 | 98 | 425 | 2.02e-53 | 184 |
MS.gene34258.t1 | AT2G30900 | 38.496 | 226 | 124 | 7 | 71 | 290 | 43 | 259 | 1.30e-51 | 174 |
MS.gene34258.t1 | AT3G62390 | 36.842 | 247 | 142 | 7 | 64 | 300 | 132 | 374 | 2.57e-51 | 178 |
MS.gene34258.t1 | AT5G20590 | 35.833 | 240 | 141 | 5 | 70 | 298 | 140 | 377 | 5.30e-51 | 176 |
MS.gene34258.t1 | AT2G31110 | 38.222 | 225 | 128 | 4 | 71 | 292 | 45 | 261 | 3.01e-50 | 171 |
MS.gene34258.t1 | AT3G06080 | 36.402 | 239 | 141 | 4 | 70 | 298 | 102 | 339 | 1.32e-48 | 169 |
MS.gene34258.t1 | AT5G19160 | 34.728 | 239 | 145 | 4 | 70 | 298 | 98 | 335 | 1.62e-48 | 169 |
MS.gene34258.t1 | AT5G58600 | 35.931 | 231 | 137 | 4 | 71 | 297 | 66 | 289 | 8.77e-48 | 165 |
MS.gene34258.t1 | AT2G34070 | 32.353 | 272 | 157 | 6 | 142 | 409 | 1 | 249 | 6.60e-46 | 159 |
MS.gene34258.t1 | AT4G25360 | 28.180 | 401 | 223 | 15 | 58 | 417 | 156 | 532 | 2.48e-43 | 159 |
MS.gene34258.t1 | AT4G25360 | 28.180 | 401 | 223 | 15 | 58 | 417 | 156 | 532 | 2.48e-43 | 159 |
MS.gene34258.t1 | AT5G51640 | 28.460 | 383 | 224 | 13 | 64 | 415 | 131 | 494 | 3.67e-43 | 158 |
MS.gene34258.t1 | AT5G64020 | 30.518 | 367 | 212 | 13 | 71 | 409 | 57 | 408 | 1.50e-42 | 154 |
MS.gene34258.t1 | AT5G64470 | 28.926 | 363 | 221 | 15 | 71 | 414 | 55 | 399 | 2.98e-42 | 153 |
MS.gene34258.t1 | AT1G70230 | 27.479 | 353 | 226 | 11 | 71 | 411 | 79 | 413 | 4.78e-41 | 150 |
MS.gene34258.t1 | AT3G14850 | 31.752 | 274 | 162 | 7 | 142 | 411 | 1 | 253 | 1.85e-40 | 145 |
MS.gene34258.t1 | AT3G02440 | 28.531 | 354 | 218 | 11 | 71 | 405 | 135 | 472 | 3.74e-40 | 149 |
MS.gene34258.t1 | AT3G02440 | 28.531 | 354 | 218 | 11 | 71 | 405 | 127 | 464 | 5.01e-40 | 149 |
MS.gene34258.t1 | AT5G15890 | 28.042 | 378 | 229 | 10 | 50 | 405 | 162 | 518 | 6.86e-39 | 147 |
MS.gene34258.t1 | AT5G20680 | 28.796 | 382 | 191 | 14 | 69 | 409 | 116 | 457 | 9.23e-39 | 145 |
MS.gene34258.t1 | AT5G20680 | 28.796 | 382 | 191 | 14 | 69 | 409 | 192 | 533 | 2.20e-38 | 145 |
MS.gene34258.t1 | AT5G64470 | 28.455 | 369 | 221 | 17 | 71 | 414 | 55 | 405 | 2.41e-38 | 143 |
MS.gene34258.t1 | AT2G37720 | 30.053 | 376 | 190 | 16 | 71 | 409 | 143 | 482 | 2.52e-38 | 144 |
MS.gene34258.t1 | AT5G20680 | 28.796 | 382 | 191 | 14 | 69 | 409 | 210 | 551 | 2.58e-38 | 145 |
MS.gene34258.t1 | AT5G20680 | 28.796 | 382 | 191 | 14 | 69 | 409 | 210 | 551 | 2.58e-38 | 145 |
MS.gene34258.t1 | AT5G20680 | 28.796 | 382 | 191 | 14 | 69 | 409 | 210 | 551 | 2.58e-38 | 145 |
MS.gene34258.t1 | AT5G20680 | 28.796 | 382 | 191 | 14 | 69 | 409 | 210 | 551 | 2.58e-38 | 145 |
MS.gene34258.t1 | AT2G14530 | 27.989 | 368 | 213 | 12 | 71 | 409 | 62 | 406 | 5.22e-38 | 142 |
MS.gene34258.t1 | AT4G23790 | 27.093 | 454 | 241 | 21 | 6 | 405 | 6 | 423 | 1.08e-37 | 142 |
MS.gene34258.t1 | AT5G06230 | 34.677 | 248 | 143 | 5 | 67 | 297 | 58 | 303 | 2.17e-37 | 138 |
MS.gene34258.t1 | AT1G01430 | 25.500 | 400 | 262 | 11 | 34 | 410 | 62 | 448 | 5.35e-36 | 137 |
MS.gene34258.t1 | AT4G11090 | 26.075 | 372 | 227 | 13 | 62 | 405 | 70 | 421 | 8.40e-36 | 137 |
MS.gene34258.t1 | AT5G15900 | 27.978 | 361 | 224 | 11 | 69 | 409 | 65 | 409 | 4.89e-35 | 134 |
MS.gene34258.t1 | AT5G15900 | 27.978 | 361 | 224 | 11 | 69 | 409 | 84 | 428 | 6.14e-35 | 134 |
MS.gene34258.t1 | AT3G28150 | 29.223 | 373 | 208 | 16 | 66 | 409 | 65 | 410 | 1.62e-34 | 133 |
MS.gene34258.t1 | AT4G01080 | 26.503 | 366 | 224 | 13 | 63 | 405 | 83 | 426 | 2.98e-34 | 132 |
MS.gene34258.t1 | AT2G31110 | 35.345 | 232 | 124 | 7 | 181 | 409 | 6 | 214 | 1.07e-33 | 125 |
MS.gene34258.t1 | AT5G64470 | 26.908 | 249 | 161 | 10 | 71 | 303 | 55 | 298 | 1.44e-21 | 95.1 |
MS.gene34258.t1 | AT5G64470 | 26.506 | 249 | 162 | 10 | 71 | 303 | 55 | 298 | 1.58e-21 | 94.7 |
Find 98 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGCAATCAGCAAAAGATTT+TGG | 0.125911 | 8.4:+46895040 | None:intergenic |
AGAAGTGAATACAATATAAT+TGG | 0.171993 | 8.4:+46897256 | None:intergenic |
AGGATTTCATTCCATGTATC+TGG | 0.201338 | 8.4:+46894995 | None:intergenic |
AACAAAAGAATGATGTTTAT+TGG | 0.212670 | 8.4:-46896746 | MS.gene34258:CDS |
CTGATTCTTTCTACACAAAT+TGG | 0.216029 | 8.4:-46896982 | MS.gene34258:CDS |
CAATACAAGGTTCGTCATAT+TGG | 0.230048 | 8.4:-46895237 | MS.gene34258:CDS |
TGGAGGGATTTCTTTCCTTC+AGG | 0.275411 | 8.4:+46896665 | None:intergenic |
TCTTCATAGGTGGAATTCTT+TGG | 0.275642 | 8.4:+46896645 | None:intergenic |
CTGTCGTGACGTTATATTCT+TGG | 0.282711 | 8.4:+46895760 | None:intergenic |
AATACAAGGTTCGTCATATT+GGG | 0.282741 | 8.4:-46895236 | MS.gene34258:CDS |
TTGGCAAGGAGTGGACATTT+TGG | 0.310618 | 8.4:-46896161 | MS.gene34258:CDS |
GCAATGTATTTGAAGGGAAA+TGG | 0.312090 | 8.4:-46897093 | MS.gene34258:CDS |
TGCATTCACTGGTGTTTACC+TGG | 0.316704 | 8.4:-46895022 | MS.gene34258:CDS |
AACAGATCATAGACTCAAAT+TGG | 0.319491 | 8.4:+46896705 | None:intergenic |
GCTTGCTCTTCAAGCTATCT+AGG | 0.322912 | 8.4:+46897209 | None:intergenic |
TAGATCTCTGTTCTTTAGTC+AGG | 0.343380 | 8.4:+46895065 | None:intergenic |
ATTACCAGTTGTTGTGTTGC+CGG | 0.344537 | 8.4:-46897137 | MS.gene34258:CDS |
ATACTACTGGGCTCCATTCA+TGG | 0.353905 | 8.4:-46896269 | MS.gene34258:CDS |
TCAACTTTAAATATCTTCAT+AGG | 0.360087 | 8.4:+46896632 | None:intergenic |
ATATAATTGGGAAAATTGAT+TGG | 0.370417 | 8.4:+46897269 | None:intergenic |
CAATGTATTTGAAGGGAAAT+GGG | 0.374415 | 8.4:-46897092 | MS.gene34258:CDS |
CAGCTCTACGGCATGTCATC+TGG | 0.379386 | 8.4:-46897172 | MS.gene34258:CDS |
TTATATTCTTGGACTTCATC+TGG | 0.380050 | 8.4:+46895771 | None:intergenic |
ATGCATCGATTGAATACTAC+TGG | 0.392477 | 8.4:-46896282 | MS.gene34258:CDS |
GATGCTCACACATCAGTTTA+CGG | 0.394570 | 8.4:-46895106 | MS.gene34258:CDS |
ATTTGAGTCTATGATCTGTT+TGG | 0.397442 | 8.4:-46896702 | MS.gene34258:CDS |
ATAATTGGGTGATGTTCAAT+AGG | 0.397627 | 8.4:+46895143 | None:intergenic |
CAATATGACGAACCTTGTAT+TGG | 0.400765 | 8.4:+46895238 | None:intergenic |
AGAAGAGAGTTGCCCTTACT+TGG | 0.406575 | 8.4:-46897038 | MS.gene34258:CDS |
GTGGTCTGCTTGACCAAGTA+AGG | 0.408960 | 8.4:+46897025 | None:intergenic |
TCCTCCGGCAACACAACAAC+TGG | 0.434980 | 8.4:+46897133 | None:intergenic |
CAAATCATACGGTACATAAA+CGG | 0.437106 | 8.4:-46896222 | MS.gene34258:CDS |
CAATTTGTGTAGAAAGAATC+AGG | 0.437639 | 8.4:+46896983 | None:intergenic |
TCTTAAACAGATATGCATAT+AGG | 0.438576 | 8.4:+46894975 | None:intergenic |
GAAGTGAATACAATATAATT+GGG | 0.442470 | 8.4:+46897257 | None:intergenic |
GAAATTGATTCAACCATGAA+TGG | 0.447404 | 8.4:+46896256 | None:intergenic |
TTGGGAAAATTGATTGGATC+CGG | 0.452959 | 8.4:+46897275 | None:intergenic |
AATATGACGAACCTTGTATT+GGG | 0.455104 | 8.4:+46895239 | None:intergenic |
CCCTCCTCAATGCGATCCTC+CGG | 0.457796 | 8.4:+46897118 | None:intergenic |
TATTTGAAGGGAAATGGGTA+TGG | 0.465084 | 8.4:-46897087 | MS.gene34258:CDS |
TTCTAATCTTTGCAGTTACA+AGG | 0.466052 | 8.4:-46897237 | MS.gene34258:CDS |
CAGACCACTTGCATGAAGAA+TGG | 0.466368 | 8.4:-46897010 | MS.gene34258:CDS |
GAGGGTTGCAATGTATTTGA+AGG | 0.469336 | 8.4:-46897100 | MS.gene34258:CDS |
GCATTCACTGGTGTTTACCT+GGG | 0.470418 | 8.4:-46895021 | MS.gene34258:CDS |
CTCACGTAGCATTGATGAAA+GGG | 0.471007 | 8.4:+46896107 | None:intergenic |
AGACCACTTGCATGAAGAAT+GGG | 0.475855 | 8.4:-46897009 | MS.gene34258:CDS |
AGGAGCTGGGAATGGAAGCC+AGG | 0.483811 | 8.4:-46895292 | MS.gene34258:CDS |
ATCAGTTTACGGCGAGCGAA+AGG | 0.487243 | 8.4:-46895095 | MS.gene34258:CDS |
CATAGGTGGAATTCTTTGGA+GGG | 0.491727 | 8.4:+46896649 | None:intergenic |
CAACTCTCTTCTTCATAAAG+AGG | 0.502052 | 8.4:+46897049 | None:intergenic |
ATTCTTTCTACACAAATTGG+AGG | 0.504866 | 8.4:-46896979 | MS.gene34258:CDS |
GTATGTCTCCAACACATTTG+TGG | 0.505067 | 8.4:-46895656 | MS.gene34258:intron |
TGTTCGAGAGTTATGTTTGG+TGG | 0.513573 | 8.4:-46896138 | MS.gene34258:CDS |
GCCGGAGGATCGCATTGAGG+AGG | 0.515226 | 8.4:-46897119 | MS.gene34258:CDS |
TCTTCTCCAGGAGCTGGGAA+TGG | 0.516727 | 8.4:-46895300 | MS.gene34258:intron |
TCATAGGTGGAATTCTTTGG+AGG | 0.523486 | 8.4:+46896648 | None:intergenic |
GGATTTCATTCCATGTATCT+GGG | 0.524709 | 8.4:+46894996 | None:intergenic |
TACCTGGGGTCCCAGATACA+TGG | 0.530934 | 8.4:-46895006 | MS.gene34258:CDS |
AATTGGAGGTGGCAGCCTCA+TGG | 0.531507 | 8.4:-46896965 | MS.gene34258:CDS |
TCAGTTTACGGCGAGCGAAA+GGG | 0.533883 | 8.4:-46895094 | MS.gene34258:CDS |
TTCCATGTATCTGGGACCCC+AGG | 0.534611 | 8.4:+46895004 | None:intergenic |
GGTTCGTCATATTGGGGCAC+AGG | 0.534995 | 8.4:-46895229 | MS.gene34258:CDS |
TGGTGTTCGAGAGTTATGTT+TGG | 0.536569 | 8.4:-46896141 | MS.gene34258:CDS |
CATTCACTGGTGTTTACCTG+GGG | 0.545869 | 8.4:-46895020 | MS.gene34258:CDS |
CTTTCTACACAAATTGGAGG+TGG | 0.550918 | 8.4:-46896976 | MS.gene34258:CDS |
AACATGTGCAACAATTTCAA+AGG | 0.558794 | 8.4:+46896773 | None:intergenic |
GTACAATCTGTAATTCCTGA+AGG | 0.559209 | 8.4:-46896680 | MS.gene34258:CDS |
TCTCCCATTCTTCATGCAAG+TGG | 0.561570 | 8.4:+46897006 | None:intergenic |
TATGAAGATATTTAAAGTTG+AGG | 0.563429 | 8.4:-46896630 | MS.gene34258:intron |
TAATTGGGTGATGTTCAATA+GGG | 0.568867 | 8.4:+46895144 | None:intergenic |
CCGGAGGATCGCATTGAGGA+GGG | 0.569780 | 8.4:-46897118 | MS.gene34258:CDS |
ACTCACGTAGCATTGATGAA+AGG | 0.570089 | 8.4:+46896106 | None:intergenic |
GTAACTTACCACAAATGTGT+TGG | 0.570891 | 8.4:+46895648 | None:intergenic |
CGTCACGACAGCATATAAGT+TGG | 0.576399 | 8.4:-46895748 | MS.gene34258:CDS |
TAGCTAAGCATGGCAAACAT+TGG | 0.579693 | 8.4:-46896180 | MS.gene34258:CDS |
TGAAATTGTTGCACATGTTG+AGG | 0.582269 | 8.4:-46896769 | MS.gene34258:CDS |
ATTTGAAGGGAAATGGGTAT+GGG | 0.582984 | 8.4:-46897086 | MS.gene34258:CDS |
AGGGTTGCAATGTATTTGAA+GGG | 0.588210 | 8.4:-46897099 | MS.gene34258:CDS |
TCAAGTCTTCGATTGATCGC+CGG | 0.588728 | 8.4:-46897294 | MS.gene34258:CDS |
ACTTTAAATATCTTCATAGG+TGG | 0.594287 | 8.4:+46896635 | None:intergenic |
CTCATGGATGCAACCTCCCA+AGG | 0.597976 | 8.4:-46896949 | MS.gene34258:intron |
TGGCAAACATTGGCAAGGAG+TGG | 0.599503 | 8.4:-46896170 | MS.gene34258:CDS |
CTCTTCTTCATAAAGAGGAT+AGG | 0.600163 | 8.4:+46897054 | None:intergenic |
ATTGGAGACTCATTACAAAG+AGG | 0.601036 | 8.4:-46896728 | MS.gene34258:CDS |
AGATCATGCAACAAATCATA+CGG | 0.601570 | 8.4:-46896233 | MS.gene34258:CDS |
ACCAGTTGTTGTGTTGCCGG+AGG | 0.602457 | 8.4:-46897134 | MS.gene34258:CDS |
ACGGCATGTCATCTGGTGGA+AGG | 0.604816 | 8.4:-46897165 | MS.gene34258:CDS |
CTTGGGAGGTTGCATCCATG+AGG | 0.606796 | 8.4:+46896950 | None:intergenic |
CTTGACTCAATAGCTAAGCA+TGG | 0.612907 | 8.4:-46896190 | MS.gene34258:CDS |
CTCTACGGCATGTCATCTGG+TGG | 0.613992 | 8.4:-46897169 | MS.gene34258:CDS |
AAAGTGTTGGTTACCTTGGG+AGG | 0.620369 | 8.4:+46896936 | None:intergenic |
GTTGCCGGAGGATCGCATTG+AGG | 0.623555 | 8.4:-46897122 | MS.gene34258:CDS |
TCATACGGTACATAAACGGA+TGG | 0.623999 | 8.4:-46896218 | MS.gene34258:CDS |
AATGAATCATACCCAATACA+AGG | 0.626400 | 8.4:-46895250 | MS.gene34258:CDS |
TGCATCGATTGAATACTACT+GGG | 0.637341 | 8.4:-46896281 | MS.gene34258:CDS |
AAGCATGGCAAACATTGGCA+AGG | 0.639024 | 8.4:-46896175 | MS.gene34258:CDS |
TGGTCTGCTTGACCAAGTAA+GGG | 0.642359 | 8.4:+46897026 | None:intergenic |
ATACAAGGTTCGTCATATTG+GGG | 0.647384 | 8.4:-46895235 | MS.gene34258:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTCAATTTTTTATTTTATTC+TGG | - | chr8.4:46896895-46896914 | MS.gene34258:intron | 10.0% |
!! | TAATAACTCTAGTTATTATT+AGG | + | chr8.4:46896800-46896819 | None:intergenic | 15.0% |
!!! | ATTTTTTTTAAGTTCACAAT+CGG | + | chr8.4:46895386-46895405 | None:intergenic | 15.0% |
!! | AACAAAAGAATGATGTTTAT+TGG | - | chr8.4:46895513-46895532 | MS.gene34258:intron | 20.0% |
!! | AATCAGACAAATTATTGAAT+TGG | - | chr8.4:46896433-46896452 | MS.gene34258:intron | 20.0% |
!! | AGAAGTGAATACAATATAAT+TGG | + | chr8.4:46895006-46895025 | None:intergenic | 20.0% |
!! | ATATAATTGGGAAAATTGAT+TGG | + | chr8.4:46894993-46895012 | None:intergenic | 20.0% |
!! | GAAGTGAATACAATATAATT+GGG | + | chr8.4:46895005-46895024 | None:intergenic | 20.0% |
!! | TCAACTTTAAATATCTTCAT+AGG | + | chr8.4:46895630-46895649 | None:intergenic | 20.0% |
!! | TTAAGTTATTTATGAAAGCA+TGG | + | chr8.4:46895698-46895717 | None:intergenic | 20.0% |
!!! | AAAAATACATTTTGAGTAAG+TGG | + | chr8.4:46896578-46896597 | None:intergenic | 20.0% |
!!! | ATTATCAAGTTTTGCTAATA+AGG | - | chr8.4:46896670-46896689 | MS.gene34258:CDS | 20.0% |
!!! | GCTAGAATTTACTTTTTAAA+GGG | + | chr8.4:46896281-46896300 | None:intergenic | 20.0% |
!!! | TATGAAGATATTTAAAGTTG+AGG | - | chr8.4:46895629-46895648 | MS.gene34258:intron | 20.0% |
! | ACTTTAAATATCTTCATAGG+TGG | + | chr8.4:46895627-46895646 | None:intergenic | 25.0% |
! | GACATAAATATTTGTGAGAT+TGG | + | chr8.4:46895827-46895846 | None:intergenic | 25.0% |
! | TCTTAAACAGATATGCATAT+AGG | + | chr8.4:46897287-46897306 | None:intergenic | 25.0% |
!! | TTTTCTGTACTCTGATAATT+GGG | + | chr8.4:46897133-46897152 | None:intergenic | 25.0% |
!!! | AGAAATTTATTTTCTTCTCC+AGG | - | chr8.4:46896947-46896966 | MS.gene34258:intron | 25.0% |
!!! | CTTTTTAAAGGGAATAAGTA+AGG | + | chr8.4:46896270-46896289 | None:intergenic | 25.0% |
!!! | GGCTAGAATTTACTTTTTAA+AGG | + | chr8.4:46896282-46896301 | None:intergenic | 25.0% |
AACAGATCATAGACTCAAAT+TGG | + | chr8.4:46895557-46895576 | None:intergenic | 30.0% | |
AACATGTGCAACAATTTCAA+AGG | + | chr8.4:46895489-46895508 | None:intergenic | 30.0% | |
AATACAAGGTTCGTCATATT+GGG | - | chr8.4:46897023-46897042 | MS.gene34258:CDS | 30.0% | |
AATATGACGAACCTTGTATT+GGG | + | chr8.4:46897023-46897042 | None:intergenic | 30.0% | |
AATGAATCATACCCAATACA+AGG | - | chr8.4:46897009-46897028 | MS.gene34258:CDS | 30.0% | |
AGATCATGCAACAAATCATA+CGG | - | chr8.4:46896026-46896045 | MS.gene34258:intron | 30.0% | |
ATAATTGGGTGATGTTCAAT+AGG | + | chr8.4:46897119-46897138 | None:intergenic | 30.0% | |
ATTCTTTCTACACAAATTGG+AGG | - | chr8.4:46895280-46895299 | MS.gene34258:CDS | 30.0% | |
ATTTGAGTCTATGATCTGTT+TGG | - | chr8.4:46895557-46895576 | MS.gene34258:intron | 30.0% | |
CAAATCATACGGTACATAAA+CGG | - | chr8.4:46896037-46896056 | MS.gene34258:intron | 30.0% | |
CAATGTATTTGAAGGGAAAT+GGG | - | chr8.4:46895167-46895186 | MS.gene34258:CDS | 30.0% | |
CAATTTGTGTAGAAAGAATC+AGG | + | chr8.4:46895279-46895298 | None:intergenic | 30.0% | |
CTGATTCTTTCTACACAAAT+TGG | - | chr8.4:46895277-46895296 | MS.gene34258:CDS | 30.0% | |
GAACAATGCATTATATGCAA+GGG | - | chr8.4:46896223-46896242 | MS.gene34258:CDS | 30.0% | |
TAATTGGGTGATGTTCAATA+GGG | + | chr8.4:46897118-46897137 | None:intergenic | 30.0% | |
TCAAGTACATCTCTATTCAA+GGG | + | chr8.4:46896329-46896348 | None:intergenic | 30.0% | |
TGTACTTGAATGAATGTTCA+TGG | - | chr8.4:46896340-46896359 | MS.gene34258:intron | 30.0% | |
TTATATTCTTGGACTTCATC+TGG | + | chr8.4:46896491-46896510 | None:intergenic | 30.0% | |
TTCAAGTACATCTCTATTCA+AGG | + | chr8.4:46896330-46896349 | None:intergenic | 30.0% | |
TTCTAATCTTTGCAGTTACA+AGG | - | chr8.4:46895022-46895041 | MS.gene34258:CDS | 30.0% | |
! | ATGCAATCAGCAAAAGATTT+TGG | + | chr8.4:46897222-46897241 | None:intergenic | 30.0% |
! | CTTTTCTGTACTCTGATAAT+TGG | + | chr8.4:46897134-46897153 | None:intergenic | 30.0% |
! | CTTTTTGTCAAGTATTTTCG+TGG | + | chr8.4:46896303-46896322 | None:intergenic | 30.0% |
! | GAAATTGATTCAACCATGAA+TGG | + | chr8.4:46896006-46896025 | None:intergenic | 30.0% |
! | GTTCAAATGTGAAAAAGTGT+TGG | + | chr8.4:46895339-46895358 | None:intergenic | 30.0% |
! | GTTGTGTAAAAAGCACAAAA+TGG | - | chr8.4:46896375-46896394 | MS.gene34258:intron | 30.0% |
! | TGCAATCAGCAAAAGATTTT+GGG | + | chr8.4:46897221-46897240 | None:intergenic | 30.0% |
!! | AACATGTTTTGTTCCAGATA+TGG | - | chr8.4:46896461-46896480 | MS.gene34258:intron | 30.0% |
!! | ATAAGTTGGCCTTAAAAACA+TGG | - | chr8.4:46896525-46896544 | MS.gene34258:intron | 30.0% |
!! | ATACATTTTGAGTAAGTGGT+TGG | + | chr8.4:46896574-46896593 | None:intergenic | 30.0% |
!! | TAAGTTGGCCTTAAAAACAT+GGG | - | chr8.4:46896526-46896545 | MS.gene34258:intron | 30.0% |
!! | TGTGCTTTTTACACAACTAT+AGG | + | chr8.4:46896372-46896391 | None:intergenic | 30.0% |
AGGATTTCATTCCATGTATC+TGG | + | chr8.4:46897267-46897286 | None:intergenic | 35.0% | |
AGGGTTGCAATGTATTTGAA+GGG | - | chr8.4:46895160-46895179 | MS.gene34258:CDS | 35.0% | |
ATACAAGGTTCGTCATATTG+GGG | - | chr8.4:46897024-46897043 | MS.gene34258:CDS | 35.0% | |
ATTGGAGACTCATTACAAAG+AGG | - | chr8.4:46895531-46895550 | MS.gene34258:intron | 35.0% | |
ATTTGAAGGGAAATGGGTAT+GGG | - | chr8.4:46895173-46895192 | MS.gene34258:CDS | 35.0% | |
CAACTCTCTTCTTCATAAAG+AGG | + | chr8.4:46895213-46895232 | None:intergenic | 35.0% | |
CAATACAAGGTTCGTCATAT+TGG | - | chr8.4:46897022-46897041 | MS.gene34258:CDS | 35.0% | |
CAATATGACGAACCTTGTAT+TGG | + | chr8.4:46897024-46897043 | None:intergenic | 35.0% | |
CCTTAAAAACATGGGCAAAT+TGG | - | chr8.4:46896534-46896553 | MS.gene34258:intron | 35.0% | |
CGGAAATCTAAGAGTAATCA+AGG | + | chr8.4:46895366-46895385 | None:intergenic | 35.0% | |
CTCTTCTTCATAAAGAGGAT+AGG | + | chr8.4:46895208-46895227 | None:intergenic | 35.0% | |
GAACATTCACCAAATCATGT+GGG | + | chr8.4:46896756-46896775 | None:intergenic | 35.0% | |
GCAATGTATTTGAAGGGAAA+TGG | - | chr8.4:46895166-46895185 | MS.gene34258:CDS | 35.0% | |
GCAGAGTCACTCTTTAAATT+TGG | + | chr8.4:46896716-46896735 | None:intergenic | 35.0% | |
GGAACAATGCATTATATGCA+AGG | - | chr8.4:46896222-46896241 | MS.gene34258:CDS | 35.0% | |
GGATTTCATTCCATGTATCT+GGG | + | chr8.4:46897266-46897285 | None:intergenic | 35.0% | |
GTAACTTACCACAAATGTGT+TGG | + | chr8.4:46896614-46896633 | None:intergenic | 35.0% | |
GTACAATCTGTAATTCCTGA+AGG | - | chr8.4:46895579-46895598 | MS.gene34258:intron | 35.0% | |
GTGAGTATATCTATAGACCT+TGG | - | chr8.4:46896170-46896189 | MS.gene34258:CDS | 35.0% | |
TAGATCTCTGTTCTTTAGTC+AGG | + | chr8.4:46897197-46897216 | None:intergenic | 35.0% | |
TATTTGAAGGGAAATGGGTA+TGG | - | chr8.4:46895172-46895191 | MS.gene34258:CDS | 35.0% | |
TCCTGCTAAAACAAAGCTAT+AGG | + | chr8.4:46895952-46895971 | None:intergenic | 35.0% | |
TCTTCATAGGTGGAATTCTT+TGG | + | chr8.4:46895617-46895636 | None:intergenic | 35.0% | |
TGAAATTGTTGCACATGTTG+AGG | - | chr8.4:46895490-46895509 | MS.gene34258:intron | 35.0% | |
TTGGGAAAATTGATTGGATC+CGG | + | chr8.4:46894987-46895006 | None:intergenic | 35.0% | |
! | AAGGGAATAAGTAAGGTGTT+TGG | + | chr8.4:46896263-46896282 | None:intergenic | 35.0% |
! | CTGAAGTCAAGAAAAGCATA+AGG | + | chr8.4:46895459-46895478 | None:intergenic | 35.0% |
! | CTTATGCTTTTCTTGACTTC+AGG | - | chr8.4:46895457-46895476 | MS.gene34258:intron | 35.0% |
!! | ATGCATCGATTGAATACTAC+TGG | - | chr8.4:46895977-46895996 | MS.gene34258:intron | 35.0% |
!! | CCAATTTGCCCATGTTTTTA+AGG | + | chr8.4:46896537-46896556 | None:intergenic | 35.0% |
!! | GAAAAAGTGTTGGTTACCTT+GGG | + | chr8.4:46895329-46895348 | None:intergenic | 35.0% |
!! | TGAAAAAGTGTTGGTTACCT+TGG | + | chr8.4:46895330-46895349 | None:intergenic | 35.0% |
!! | TGCATCGATTGAATACTACT+GGG | - | chr8.4:46895978-46895997 | MS.gene34258:intron | 35.0% |
!!! | TCCTATAGCTTTGTTTTAGC+AGG | - | chr8.4:46895948-46895967 | MS.gene34258:intron | 35.0% |
AAAGTGAAGCCCACATGATT+TGG | - | chr8.4:46896744-46896763 | MS.gene34258:CDS | 40.0% | |
AATGCATTATATGCAAGGGC+CGG | - | chr8.4:46896227-46896246 | MS.gene34258:CDS | 40.0% | |
AGACCACTTGCATGAAGAAT+GGG | - | chr8.4:46895250-46895269 | MS.gene34258:CDS | 40.0% | |
ATTACCAGTTGTTGTGTTGC+CGG | - | chr8.4:46895122-46895141 | MS.gene34258:CDS | 40.0% | |
CATAGGTGGAATTCTTTGGA+GGG | + | chr8.4:46895613-46895632 | None:intergenic | 40.0% | |
CGAACATTCACCAAATCATG+TGG | + | chr8.4:46896757-46896776 | None:intergenic | 40.0% | |
CTGTCGTGACGTTATATTCT+TGG | + | chr8.4:46896502-46896521 | None:intergenic | 40.0% | |
CTTGACTCAATAGCTAAGCA+TGG | - | chr8.4:46896069-46896088 | MS.gene34258:intron | 40.0% | |
CTTTCTACACAAATTGGAGG+TGG | - | chr8.4:46895283-46895302 | MS.gene34258:CDS | 40.0% | |
GAGGGTTGCAATGTATTTGA+AGG | - | chr8.4:46895159-46895178 | MS.gene34258:CDS | 40.0% | |
GATGCTCACACATCAGTTTA+CGG | - | chr8.4:46897153-46897172 | MS.gene34258:CDS | 40.0% | |
GTATATCTATAGACCTTGGC+TGG | - | chr8.4:46896174-46896193 | MS.gene34258:CDS | 40.0% | |
GTATGTCTCCAACACATTTG+TGG | - | chr8.4:46896603-46896622 | MS.gene34258:intron | 40.0% | |
TAGCTAAGCATGGCAAACAT+TGG | - | chr8.4:46896079-46896098 | MS.gene34258:intron | 40.0% | |
TCATACGGTACATAAACGGA+TGG | - | chr8.4:46896041-46896060 | MS.gene34258:intron | 40.0% | |
TCATAGGTGGAATTCTTTGG+AGG | + | chr8.4:46895614-46895633 | None:intergenic | 40.0% | |
TGGTGTTCGAGAGTTATGTT+TGG | - | chr8.4:46896118-46896137 | MS.gene34258:CDS | 40.0% | |
TGTTCGAGAGTTATGTTTGG+TGG | - | chr8.4:46896121-46896140 | MS.gene34258:CDS | 40.0% | |
TTCATCTGGTGATCCATATC+TGG | + | chr8.4:46896477-46896496 | None:intergenic | 40.0% | |
! | AAGCAGTTTTCATCACTTCC+TGG | + | chr8.4:46896988-46897007 | None:intergenic | 40.0% |
! | TATTTTCTTCTCCAGGAGCT+GGG | - | chr8.4:46896954-46896973 | MS.gene34258:CDS | 40.0% |
! | TTATTTTCTTCTCCAGGAGC+TGG | - | chr8.4:46896953-46896972 | MS.gene34258:CDS | 40.0% |
!! | ACTCACGTAGCATTGATGAA+AGG | + | chr8.4:46896156-46896175 | None:intergenic | 40.0% |
!! | AGCCATGTTTTTCAGCTCTA+CGG | - | chr8.4:46895075-46895094 | MS.gene34258:CDS | 40.0% |
!! | CTCACGTAGCATTGATGAAA+GGG | + | chr8.4:46896155-46896174 | None:intergenic | 40.0% |
!! | CTTTTGCTGATTGCATTCAC+TGG | - | chr8.4:46897226-46897245 | MS.gene34258:CDS | 40.0% |
AAGCATGGCAAACATTGGCA+AGG | - | chr8.4:46896084-46896103 | MS.gene34258:intron | 45.0% | |
AGAAGAGAGTTGCCCTTACT+TGG | - | chr8.4:46895221-46895240 | MS.gene34258:CDS | 45.0% | |
ATACTACTGGGCTCCATTCA+TGG | - | chr8.4:46895990-46896009 | MS.gene34258:intron | 45.0% | |
CAGACCACTTGCATGAAGAA+TGG | - | chr8.4:46895249-46895268 | MS.gene34258:CDS | 45.0% | |
CATTCACTGGTGTTTACCTG+GGG | - | chr8.4:46897239-46897258 | MS.gene34258:CDS | 45.0% | |
CGTCACGACAGCATATAAGT+TGG | - | chr8.4:46896511-46896530 | MS.gene34258:intron | 45.0% | |
GCATTCACTGGTGTTTACCT+GGG | - | chr8.4:46897238-46897257 | MS.gene34258:CDS | 45.0% | |
GCTTGCTCTTCAAGCTATCT+AGG | + | chr8.4:46895053-46895072 | None:intergenic | 45.0% | |
TCAAGTCTTCGATTGATCGC+CGG | - | chr8.4:46894965-46894984 | MS.gene34258:CDS | 45.0% | |
TCTCCCATTCTTCATGCAAG+TGG | + | chr8.4:46895256-46895275 | None:intergenic | 45.0% | |
TGCATTCACTGGTGTTTACC+TGG | - | chr8.4:46897237-46897256 | MS.gene34258:CDS | 45.0% | |
TGCCGTAGAGCTGAAAAACA+TGG | + | chr8.4:46895080-46895099 | None:intergenic | 45.0% | |
TGGAGGGATTTCTTTCCTTC+AGG | + | chr8.4:46895597-46895616 | None:intergenic | 45.0% | |
TGGTCTGCTTGACCAAGTAA+GGG | + | chr8.4:46895236-46895255 | None:intergenic | 45.0% | |
TGTCAACTGAGCTATGCTCA+CGG | + | chr8.4:46896202-46896221 | None:intergenic | 45.0% | |
! | TTGGCAAGGAGTGGACATTT+TGG | - | chr8.4:46896098-46896117 | MS.gene34258:intron | 45.0% |
!! | AAAGTGTTGGTTACCTTGGG+AGG | + | chr8.4:46895326-46895345 | None:intergenic | 45.0% |
ATCAGTTTACGGCGAGCGAA+AGG | - | chr8.4:46897164-46897183 | MS.gene34258:CDS | 50.0% | |
GTCAACTGAGCTATGCTCAC+GGG | + | chr8.4:46896201-46896220 | None:intergenic | 50.0% | |
GTGAGCATAGCTCAGTTGAC+AGG | - | chr8.4:46896201-46896220 | MS.gene34258:CDS | 50.0% | |
GTGGTCTGCTTGACCAAGTA+AGG | + | chr8.4:46895237-46895256 | None:intergenic | 50.0% | |
TCAGTTTACGGCGAGCGAAA+GGG | - | chr8.4:46897165-46897184 | MS.gene34258:CDS | 50.0% | |
TGGCAAACATTGGCAAGGAG+TGG | - | chr8.4:46896089-46896108 | MS.gene34258:intron | 50.0% | |
! | GGTGTTTGGAGTTCGAACTC+CGG | + | chr8.4:46896249-46896268 | None:intergenic | 50.0% |
AATTGGAGGTGGCAGCCTCA+TGG | - | chr8.4:46895294-46895313 | MS.gene34258:intron | 55.0% | |
ACCAGTTGTTGTGTTGCCGG+AGG | - | chr8.4:46895125-46895144 | MS.gene34258:CDS | 55.0% | |
ACGGCATGTCATCTGGTGGA+AGG | - | chr8.4:46895094-46895113 | MS.gene34258:CDS | 55.0% | |
CAGCTCTACGGCATGTCATC+TGG | - | chr8.4:46895087-46895106 | MS.gene34258:CDS | 55.0% | |
CTCATGGATGCAACCTCCCA+AGG | - | chr8.4:46895310-46895329 | MS.gene34258:intron | 55.0% | |
CTCTACGGCATGTCATCTGG+TGG | - | chr8.4:46895090-46895109 | MS.gene34258:CDS | 55.0% | |
CTTGGGAGGTTGCATCCATG+AGG | + | chr8.4:46895312-46895331 | None:intergenic | 55.0% | |
GGTTCGTCATATTGGGGCAC+AGG | - | chr8.4:46897030-46897049 | MS.gene34258:CDS | 55.0% | |
TACCTGGGGTCCCAGATACA+TGG | - | chr8.4:46897253-46897272 | MS.gene34258:CDS | 55.0% | |
TCCTCCGGCAACACAACAAC+TGG | + | chr8.4:46895129-46895148 | None:intergenic | 55.0% | |
TCTTCTCCAGGAGCTGGGAA+TGG | - | chr8.4:46896959-46896978 | MS.gene34258:CDS | 55.0% | |
! | TTCCATGTATCTGGGACCCC+AGG | + | chr8.4:46897258-46897277 | None:intergenic | 55.0% |
AGGAGCTGGGAATGGAAGCC+AGG | - | chr8.4:46896967-46896986 | MS.gene34258:CDS | 60.0% | |
CCCTCCTCAATGCGATCCTC+CGG | + | chr8.4:46895144-46895163 | None:intergenic | 60.0% | |
CCGGAGGATCGCATTGAGGA+GGG | - | chr8.4:46895141-46895160 | MS.gene34258:CDS | 60.0% | |
GTTGCCGGAGGATCGCATTG+AGG | - | chr8.4:46895137-46895156 | MS.gene34258:CDS | 60.0% | |
TATGCTCACGGGACCAGCCA+AGG | + | chr8.4:46896190-46896209 | None:intergenic | 60.0% | |
TGGCTTCCATTCCCAGCTCC+TGG | + | chr8.4:46896968-46896987 | None:intergenic | 60.0% | |
GCCGGAGGATCGCATTGAGG+AGG | - | chr8.4:46895140-46895159 | MS.gene34258:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 46894955 | 46897326 | 46894955 | ID=MS.gene34258 |
chr8.4 | mRNA | 46894955 | 46897326 | 46894955 | ID=MS.gene34258.t1;Parent=MS.gene34258 |
chr8.4 | exon | 46896950 | 46897326 | 46896950 | ID=MS.gene34258.t1.exon1;Parent=MS.gene34258.t1 |
chr8.4 | CDS | 46896950 | 46897326 | 46896950 | ID=cds.MS.gene34258.t1;Parent=MS.gene34258.t1 |
chr8.4 | exon | 46896631 | 46896802 | 46896631 | ID=MS.gene34258.t1.exon2;Parent=MS.gene34258.t1 |
chr8.4 | CDS | 46896631 | 46896802 | 46896631 | ID=cds.MS.gene34258.t1;Parent=MS.gene34258.t1 |
chr8.4 | exon | 46896112 | 46896311 | 46896112 | ID=MS.gene34258.t1.exon3;Parent=MS.gene34258.t1 |
chr8.4 | CDS | 46896112 | 46896311 | 46896112 | ID=cds.MS.gene34258.t1;Parent=MS.gene34258.t1 |
chr8.4 | exon | 46895657 | 46895803 | 46895657 | ID=MS.gene34258.t1.exon4;Parent=MS.gene34258.t1 |
chr8.4 | CDS | 46895657 | 46895803 | 46895657 | ID=cds.MS.gene34258.t1;Parent=MS.gene34258.t1 |
chr8.4 | exon | 46894955 | 46895312 | 46894955 | ID=MS.gene34258.t1.exon5;Parent=MS.gene34258.t1 |
chr8.4 | CDS | 46894955 | 46895312 | 46894955 | ID=cds.MS.gene34258.t1;Parent=MS.gene34258.t1 |
Gene Sequence |
Protein sequence |