AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene34550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34550.t1 MTR_0019s0120 98.750 400 5 0 3 402 237 636 0.0 827
MS.gene34550.t1 MTR_1g101370 78.481 395 80 2 3 393 225 618 0.0 668
MS.gene34550.t1 MTR_0019s0120 98.658 298 4 0 3 300 237 534 0.0 620
MS.gene34550.t1 MTR_8g432680 68.657 402 122 1 3 400 237 638 0.0 618
MS.gene34550.t1 MTR_7g076170 68.905 402 120 2 3 400 233 633 0.0 614
MS.gene34550.t1 MTR_8g100075 63.092 401 143 2 3 400 230 628 0.0 561
MS.gene34550.t1 MTR_8g055840 60.448 402 148 4 3 401 216 609 1.01e-180 516
MS.gene34550.t1 MTR_5g040360 58.706 402 154 4 3 401 216 608 2.58e-175 503
MS.gene34550.t1 MTR_4g098890 62.532 387 141 4 3 389 218 600 7.59e-171 518
MS.gene34550.t1 MTR_3g040370 56.892 399 160 3 3 401 217 603 7.73e-164 473
MS.gene34550.t1 MTR_7g006060 55.882 374 159 3 3 372 177 548 1.27e-155 451
MS.gene34550.t1 MTR_8g071280 50.505 396 184 8 3 394 203 590 1.21e-130 388
MS.gene34550.t1 MTR_5g026930 48.223 394 192 7 3 392 205 590 8.38e-130 386
MS.gene34550.t1 MTR_8g432620 44.638 401 193 9 3 393 220 601 7.83e-121 363
MS.gene34550.t1 MTR_7g076150 44.750 400 192 9 3 392 64 444 6.67e-118 350
MS.gene34550.t1 MTR_7g076150 44.750 400 192 9 3 392 207 587 1.12e-115 349
MS.gene34550.t1 MTR_1g442840 44.474 371 185 8 3 368 121 475 1.57e-105 321
MS.gene34550.t1 MTR_1g442840 44.474 371 185 8 3 368 234 588 1.61e-104 322
MS.gene34550.t1 MTR_1g075900 42.752 407 209 10 3 401 233 623 6.73e-104 320
MS.gene34550.t1 MTR_3g096480 42.822 404 197 12 3 392 393 776 2.05e-103 323
MS.gene34550.t1 MTR_5g080720 40.863 394 209 7 3 389 261 637 6.36e-103 318
MS.gene34550.t1 MTR_1g069785 41.191 403 213 9 3 397 204 590 1.73e-100 310
MS.gene34550.t1 MTR_8g093880 42.821 390 189 14 3 376 423 794 2.08e-99 314
MS.gene34550.t1 MTR_5g026930 48.675 302 144 6 3 300 205 499 3.02e-97 299
MS.gene34550.t1 MTR_3g068990 40.355 394 211 8 3 389 289 665 3.99e-97 304
MS.gene34550.t1 MTR_1g029730 39.599 399 213 10 3 391 278 658 1.32e-95 300
MS.gene34550.t1 MTR_5g021100 39.803 407 201 12 3 392 454 833 1.67e-95 304
MS.gene34550.t1 MTR_3g071530 41.223 376 188 11 3 368 278 630 9.39e-94 295
MS.gene34550.t1 MTR_5g083150 39.702 403 200 11 3 392 226 598 1.86e-93 293
MS.gene34550.t1 MTR_8g076650 39.276 387 211 8 3 379 511 883 6.83e-93 298
MS.gene34550.t1 MTR_3g088790 39.312 407 208 10 3 392 358 742 8.28e-93 295
MS.gene34550.t1 MTR_1g051055 39.401 401 210 11 3 393 227 604 9.47e-89 280
MS.gene34550.t1 MTR_5g080720 41.617 334 171 7 3 329 261 577 6.39e-86 272
MS.gene34550.t1 MTR_1g022255 39.000 400 201 11 4 392 332 699 2.20e-85 274
MS.gene34550.t1 MTR_5g064080 34.375 416 231 12 4 396 278 674 9.93e-74 243
MS.gene34550.t1 MTR_3g074780 33.254 418 237 9 4 397 294 693 2.55e-73 242
MS.gene34550.t1 MTR_4g083030 35.385 390 218 13 4 381 228 595 1.02e-71 236
MS.gene34550.t1 MTR_1g022255 33.704 270 142 8 4 263 332 574 1.68e-38 146
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34550.t1 AT2G45750 66.667 405 128 2 3 400 219 623 0.0 595
MS.gene34550.t1 AT4G00750 66.093 407 127 4 3 401 228 631 0.0 593
MS.gene34550.t1 AT1G33170 61.153 399 150 2 3 397 242 639 0.0 554
MS.gene34550.t1 AT4G10440 63.000 400 142 4 3 398 225 622 0.0 551
MS.gene34550.t1 AT1G26850 60.902 399 151 3 3 398 218 614 0.0 523
MS.gene34550.t1 AT1G26850 60.902 399 151 3 3 398 218 614 0.0 523
MS.gene34550.t1 AT4G18030 59.184 392 157 3 3 394 217 605 4.18e-172 495
MS.gene34550.t1 AT2G43200 53.351 388 173 4 3 387 224 606 1.20e-148 435
MS.gene34550.t1 AT2G43200 53.351 388 173 4 3 387 224 606 1.20e-148 435
MS.gene34550.t1 AT1G31850 48.750 400 187 10 3 394 209 598 5.36e-131 389
MS.gene34550.t1 AT1G31850 48.750 400 187 10 3 394 209 598 5.36e-131 389
MS.gene34550.t1 AT1G31850 48.750 400 187 10 3 394 209 598 5.36e-131 389
MS.gene34550.t1 AT1G31850 48.750 400 187 10 3 394 209 598 5.36e-131 389
MS.gene34550.t1 AT4G19120 47.407 405 199 7 3 401 203 599 5.51e-126 376
MS.gene34550.t1 AT4G19120 47.407 405 199 7 3 401 203 599 5.51e-126 376
MS.gene34550.t1 AT1G26850 58.537 287 114 3 3 286 218 502 1.57e-118 354
MS.gene34550.t1 AT4G00740 43.951 405 200 7 3 398 213 599 1.38e-116 352
MS.gene34550.t1 AT4G00740 43.951 405 200 7 3 398 213 599 1.38e-116 352
MS.gene34550.t1 AT2G39750 42.211 398 200 9 3 390 313 690 1.38e-105 327
MS.gene34550.t1 AT1G04430 42.579 411 202 10 3 397 226 618 5.39e-103 318
MS.gene34550.t1 AT1G04430 42.579 411 202 10 3 397 226 618 5.39e-103 318
MS.gene34550.t1 AT1G04430 42.579 411 202 10 3 397 226 618 5.39e-103 318
MS.gene34550.t1 AT5G06050 40.750 400 211 8 3 394 285 666 9.34e-103 319
MS.gene34550.t1 AT4G14360 44.205 371 186 8 3 368 218 572 5.52e-101 312
MS.gene34550.t1 AT4G14360 44.205 371 186 8 3 368 218 572 5.52e-101 312
MS.gene34550.t1 AT5G14430 42.928 403 205 10 3 396 222 608 2.17e-99 308
MS.gene34550.t1 AT5G14430 42.928 403 205 10 3 396 222 608 3.00e-99 308
MS.gene34550.t1 AT3G23300 43.011 372 191 8 3 369 221 576 6.88e-99 307
MS.gene34550.t1 AT3G23300 43.011 372 191 8 3 369 221 576 6.88e-99 307
MS.gene34550.t1 AT2G34300 40.488 410 202 12 3 395 375 759 1.18e-96 305
MS.gene34550.t1 AT2G34300 40.488 410 202 12 3 395 375 759 1.18e-96 305
MS.gene34550.t1 AT2G34300 40.488 410 202 12 3 395 375 759 1.18e-96 305
MS.gene34550.t1 AT5G64030 40.199 403 209 11 3 392 433 816 8.47e-96 305
MS.gene34550.t1 AT3G51070 41.133 406 201 14 3 392 506 889 9.19e-96 306
MS.gene34550.t1 AT1G29470 40.000 405 213 11 3 396 375 760 9.53e-96 303
MS.gene34550.t1 AT1G29470 40.000 405 213 11 3 396 375 760 9.53e-96 303
MS.gene34550.t1 AT4G19120 49.013 304 142 6 3 300 203 499 1.57e-95 295
MS.gene34550.t1 AT1G77260 38.384 396 218 8 3 390 277 654 5.60e-95 298
MS.gene34550.t1 AT5G04060 38.791 397 215 6 3 393 224 598 1.02e-94 296
MS.gene34550.t1 AT3G10200 39.401 401 209 10 3 393 213 589 4.02e-93 291
MS.gene34550.t1 AT2G40280 38.596 399 204 12 3 392 215 581 2.71e-90 284
MS.gene34550.t1 AT3G56080 37.656 401 208 11 3 392 239 608 1.31e-89 283
MS.gene34550.t1 AT3G10200 39.305 374 192 10 3 365 213 562 2.71e-84 269
MS.gene34550.t1 AT1G19430 38.750 400 202 11 4 392 355 722 2.90e-83 269
MS.gene34550.t1 AT1G19430 38.750 400 202 11 4 392 355 722 2.90e-83 269
MS.gene34550.t1 AT3G51070 43.195 338 162 12 3 326 506 827 2.81e-80 263
MS.gene34550.t1 AT1G13860 33.416 401 224 9 4 381 56 436 5.80e-76 243
MS.gene34550.t1 AT1G78240 35.096 416 220 12 4 391 285 678 1.97e-74 245
MS.gene34550.t1 AT1G78240 35.096 416 220 12 4 391 285 678 1.97e-74 245
MS.gene34550.t1 AT3G56080 38.209 335 173 10 3 326 239 550 2.50e-74 241
MS.gene34550.t1 AT1G13860 33.666 401 223 10 4 381 212 592 3.12e-74 243
MS.gene34550.t1 AT1G13860 33.666 401 223 10 4 381 212 592 3.12e-74 243
MS.gene34550.t1 AT1G13860 33.666 401 223 10 4 381 212 592 3.12e-74 243
MS.gene34550.t1 AT1G13860 33.666 401 223 10 4 381 212 592 3.12e-74 243
MS.gene34550.t1 AT2G03480 32.161 398 209 10 4 381 228 584 4.57e-67 223
MS.gene34550.t1 AT2G03480 32.821 390 228 10 4 381 228 595 9.49e-67 223
MS.gene34550.t1 AT1G19430 33.582 268 141 8 4 261 355 595 3.16e-37 142
MS.gene34550.t1 AT2G03480 37.857 140 82 1 4 143 228 362 9.02e-29 117

Find 102 sgRNAs with CRISPR-Local

Find 208 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAGACATGAATGCTTATT+TGG 0.073772 6.3:-53524107 MS.gene34550:CDS
CACTTGTTAAATATCCTATT+TGG 0.102129 6.3:-53524069 MS.gene34550:CDS
TTTAGCTACATTCTCAATTT+TGG 0.149493 6.3:+53525899 None:intergenic
CTTCTTTGTTGGACACTTTA+GGG 0.225235 6.3:+53524320 None:intergenic
TGATTGGAATGTATCATAAT+TGG 0.257260 6.3:-53523982 MS.gene34550:intron
ATTTCAAAGGGGACCATTAA+AGG 0.260047 6.3:-53524238 MS.gene34550:CDS
TCTTCTTTGTTGGACACTTT+AGG 0.260669 6.3:+53524319 None:intergenic
CAATTCGTTGGAAGAAATAT+TGG 0.262781 6.3:-53525965 MS.gene34550:CDS
TATTTGCTGTGAAGAAATAT+TGG 0.264293 6.3:-53523233 MS.gene34550:CDS
ATTGCAAATTCACTCAAAAT+AGG 0.265035 6.3:-53525806 MS.gene34550:CDS
CTTATTCCATGGCCTGAATA+TGG 0.267383 6.3:-53526843 MS.gene34550:intron
AGCACATACCATGCTTTATC+AGG 0.274972 6.3:+53525759 None:intergenic
ACCTGAAATTTCTTCTTTGT+TGG 0.284477 6.3:+53524309 None:intergenic
TTATTCTGCTCTTGGCAAAA+AGG 0.302945 6.3:+53525783 None:intergenic
CTCAAATGACAATACTATTT+AGG 0.311881 6.3:-53523199 None:intergenic
TTGAGGTGTGACACCTTTAA+TGG 0.321435 6.3:+53524225 None:intergenic
CTAATTATCACACTTCCTTC+TGG 0.328225 6.3:+53523363 None:intergenic
AATAAGCATTCATGTCTAAT+AGG 0.333573 6.3:+53524110 None:intergenic
CAATATTTCTTCCAACGAAT+TGG 0.335639 6.3:+53525966 None:intergenic
TTTCAAGAGGCCCATCTTCA+TGG 0.344644 6.3:+53523268 None:intergenic
AGAAAGGTGATATTGCTATT+TGG 0.345270 6.3:-53525851 MS.gene34550:CDS
TCCAACAAAGAAGAAATTTC+AGG 0.345485 6.3:-53524310 MS.gene34550:CDS
ACTTGTTAAATATCCTATTT+GGG 0.348847 6.3:-53524068 MS.gene34550:CDS
ATGTATACCTGTCATTATAA+AGG 0.354957 6.3:+53523795 None:intergenic
ATGTATGCAGGTTGCTAGTT+GGG 0.358547 6.3:-53527042 None:intergenic
AGAGGTGTTCCTGCAATTAT+TGG 0.359750 6.3:-53526933 MS.gene34550:CDS
AAGAAAACTATACCATATTC+AGG 0.368879 6.3:+53526831 None:intergenic
TAGAGATGATGTAGATATAT+TGG 0.374420 6.3:-53523343 MS.gene34550:CDS
TTAGACATGAATGCTTATTT+GGG 0.377741 6.3:-53524106 MS.gene34550:CDS
TTCTACGTCCTGGTGGGTAT+TGG 0.381477 6.3:-53526004 MS.gene34550:CDS
ACACAGAATCAGCATGAATT+AGG 0.382074 6.3:+53523822 None:intergenic
ACCACATTCATAACCCAAAT+AGG 0.383835 6.3:+53524055 None:intergenic
TCTCAAAAGACAATCAACTA+TGG 0.388474 6.3:-53524198 MS.gene34550:CDS
GCCATGTCAAAGGCTCTAGA+AGG 0.400141 6.3:+53526882 None:intergenic
TATCAGGATTATTCTGCTCT+TGG 0.402241 6.3:+53525775 None:intergenic
GGTGGGTATTGGATTCTATC+TGG 0.410013 6.3:-53525993 MS.gene34550:CDS
GTATCAACTTTAGCTTGAAT+AGG 0.420482 6.3:+53524031 None:intergenic
TGAATTAGGTCATAAGTTCT+AGG 0.424421 6.3:+53523836 None:intergenic
GTTCAATTTGCTCTTGAAAG+AGG 0.426870 6.3:-53526951 MS.gene34550:CDS
TCTGCTTTGTAGATGTGAAT+TGG 0.430180 6.3:-53523421 MS.gene34550:intron
GGAAGAAATATTGGAAAGGA+TGG 0.431557 6.3:-53525956 MS.gene34550:CDS
AACAATCAACTTGGAAAAGC+TGG 0.441002 6.3:-53524145 MS.gene34550:CDS
ATGTAGCTAAAAGCCTTTGT+TGG 0.443086 6.3:-53525887 MS.gene34550:CDS
TATATCACGTGATAGTAGAT+AGG 0.448007 6.3:+53527016 None:intergenic
TTGTTGGACACTTTAGGGAG+TGG 0.452460 6.3:+53524325 None:intergenic
GTTCTCGTTGTCTTATTCCA+TGG 0.453451 6.3:-53526854 MS.gene34550:CDS
ATATATGAAAGAGGGTTGAT+TGG 0.453552 6.3:-53523998 MS.gene34550:CDS
TGTTTAGCCTTTATAATGAC+AGG 0.459506 6.3:-53523802 MS.gene34550:intron
CAGGTGGGGAATTAAACAAT+TGG 0.462584 6.3:-53524291 MS.gene34550:CDS
ATGGTCCCCTTTGAAATCCT+AGG 0.473543 6.3:+53524244 None:intergenic
CAAATTGTGGACCATGAAGA+TGG 0.476768 6.3:-53523279 MS.gene34550:CDS
TTGGAAAAGCTGGTAGATAC+AGG 0.480976 6.3:-53524135 MS.gene34550:CDS
AAAGAGCATAATCAATGGCT+TGG 0.481691 6.3:-53523313 MS.gene34550:CDS
GCAAAGACACCAATAATTGC+AGG 0.482342 6.3:+53526924 None:intergenic
CATAATCAATGGCTTGGAAT+GGG 0.484368 6.3:-53523307 MS.gene34550:CDS
CCTTTGTTGGAATAAAATAG+TGG 0.487141 6.3:-53525874 MS.gene34550:CDS
TGTGCTTCATGAGTGTCCCT+TGG 0.488162 6.3:+53526975 None:intergenic
CAAGCTAAAGTTGATACACT+TGG 0.491094 6.3:-53524025 MS.gene34550:CDS
TATCTGGTCCACCAATTCGT+TGG 0.505264 6.3:-53525977 MS.gene34550:CDS
TCCTATTTGGGTTATGAATG+TGG 0.505514 6.3:-53524056 MS.gene34550:CDS
TATGTATGCAGGTTGCTAGT+TGG 0.506720 6.3:-53527043 None:intergenic
AAAAGTTTCTCTCTTTCAAG+AGG 0.510531 6.3:+53523255 None:intergenic
TATTTCTTCCAACGAATTGG+TGG 0.511249 6.3:+53525969 None:intergenic
ACCCCACCTAGGATTTCAAA+GGG 0.515316 6.3:-53524250 MS.gene34550:CDS
AACAGTGTCAATTGCTCCAA+GGG 0.515999 6.3:-53526991 MS.gene34550:CDS
CTAAATAGTATTGTCATTTG+AGG 0.516055 6.3:+53523200 None:intergenic
CCCCTTTGAAATCCTAGGTG+GGG 0.516176 6.3:+53524249 None:intergenic
TGGAATAAAATAGTGGAGAA+AGG 0.516837 6.3:-53525867 MS.gene34550:CDS
GCATAATCAATGGCTTGGAA+TGG 0.517234 6.3:-53523308 MS.gene34550:CDS
ACATGTTGCTAGAGATGGAT+AGG 0.518870 6.3:-53523395 MS.gene34550:CDS
CCCTTCTAGAGCCTTTGACA+TGG 0.525416 6.3:-53526883 MS.gene34550:CDS
GACATGAATGCTTATTTGGG+TGG 0.530858 6.3:-53524103 MS.gene34550:CDS
ATAGTATTGTCATTTGAGGC+AGG 0.531671 6.3:+53523204 None:intergenic
TCCCCTTTGAAATCCTAGGT+GGG 0.532337 6.3:+53524248 None:intergenic
GGAAGACATGTTGCTAGAGA+TGG 0.536152 6.3:-53523400 MS.gene34550:CDS
ACTATACCATATTCAGGCCA+TGG 0.542687 6.3:+53526837 None:intergenic
TGTATGCAGGTTGCTAGTTG+GGG 0.554334 6.3:-53527041 MS.gene34550:CDS
GTTGATAGAATTCTACGTCC+TGG 0.555005 6.3:-53526014 MS.gene34550:CDS
AAAGTAAAGAGCATAATCAA+TGG 0.558091 6.3:-53523318 MS.gene34550:CDS
CTTGGAGCAATATATGAAAG+AGG 0.559920 6.3:-53524007 MS.gene34550:CDS
AGAACAATGTGCCATGTCAA+AGG 0.573579 6.3:+53526872 None:intergenic
CAAAGAAGAAATTTCAGGTG+GGG 0.578360 6.3:-53524305 MS.gene34550:CDS
AACCCCACCTAGGATTTCAA+AGG 0.579195 6.3:-53524251 MS.gene34550:CDS
GAAGAAATATTGGAAAGGAT+GGG 0.586672 6.3:-53525955 MS.gene34550:CDS
AACAAAGAAGAAATTTCAGG+TGG 0.587726 6.3:-53524307 MS.gene34550:CDS
CGTTGGAAGAAATATTGGAA+AGG 0.592191 6.3:-53525960 MS.gene34550:CDS
AGAATAATCCTGATAAAGCA+TGG 0.595250 6.3:-53525767 MS.gene34550:intron
GGAATGGGAGAGTCAAATTG+TGG 0.598742 6.3:-53523292 MS.gene34550:CDS
TAACAGTGTCAATTGCTCCA+AGG 0.600861 6.3:-53526992 MS.gene34550:CDS
ATTGTCATTTGAGGCAGGAG+AGG 0.601191 6.3:+53523209 None:intergenic
AAATTGTGGACCATGAAGAT+GGG 0.601433 6.3:-53523278 MS.gene34550:CDS
GATAGGATTCTTAGACCAGA+AGG 0.608500 6.3:-53523378 MS.gene34550:CDS
TCAAAGGCTCTAGAAGGGAA+AGG 0.608892 6.3:+53526888 None:intergenic
GATAGAATTCTACGTCCTGG+TGG 0.611198 6.3:-53526011 MS.gene34550:CDS
CCATGTCAAAGGCTCTAGAA+GGG 0.611499 6.3:+53526883 None:intergenic
GTCCCCTTTGAAATCCTAGG+TGG 0.627138 6.3:+53524247 None:intergenic
ACAAAGAAGAAATTTCAGGT+GGG 0.634673 6.3:-53524306 MS.gene34550:CDS
TTGGAGCAATATATGAAAGA+GGG 0.636053 6.3:-53524006 MS.gene34550:CDS
ATAGAATTCTACGTCCTGGT+GGG 0.639209 6.3:-53526010 MS.gene34550:CDS
GACTAAAATCAACCCCACCT+AGG 0.665392 6.3:-53524261 MS.gene34550:CDS
GATAGAATCCAATACCCACC+AGG 0.684534 6.3:+53525996 None:intergenic
CCCCACCTAGGATTTCAAAG+GGG 0.775769 6.3:-53524249 MS.gene34550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATAAGAATAAAAAATAAT+TGG + chr6.3:53525507-53525526 None:intergenic 10.0%
!!! ATACATTTATTTTATGTTAT+AGG - chr6.3:53526460-53526479 MS.gene34550:intron 10.0%
!!! TAGGATTTTATAAAAAAAAT+TGG - chr6.3:53526479-53526498 MS.gene34550:intron 10.0%
!!! TTATATCCTTTAAAAATTAT+CGG + chr6.3:53524983-53525002 None:intergenic 10.0%
!! AAAAATTTACAGATAACAAA+TGG + chr6.3:53525728-53525747 None:intergenic 15.0%
!! AATATAGTTCATACATTAAA+AGG - chr6.3:53524041-53524060 MS.gene34550:CDS 15.0%
!! AATGAATTCTATATATTGTT+TGG + chr6.3:53525677-53525696 None:intergenic 15.0%
!! ATATTTCAAAGACTAAAATA+AGG + chr6.3:53523866-53523885 None:intergenic 15.0%
!! ATGAACAAAAAAATTGTTAT+AGG - chr6.3:53526622-53526641 MS.gene34550:intron 15.0%
!! TACAAAAAAATGCAATAATT+TGG + chr6.3:53524626-53524645 None:intergenic 15.0%
!! TGACAATATAAACATAAATT+TGG - chr6.3:53525406-53525425 MS.gene34550:intron 15.0%
!! TGTATATAATAGACAAAATA+AGG + chr6.3:53523488-53523507 None:intergenic 15.0%
!! TTTCAAAATAATTTAGTACA+GGG + chr6.3:53525103-53525122 None:intergenic 15.0%
!!! AAAAAAGTGTAACATTATTT+TGG - chr6.3:53523553-53523572 MS.gene34550:intron 15.0%
!!! AAATAATGTTACACTTTTTT+AGG + chr6.3:53523553-53523572 None:intergenic 15.0%
!!! AGGTTATAATTAGATTTTAA+AGG + chr6.3:53526794-53526813 None:intergenic 15.0%
!!! ATAAATTTGGTTTACATTTT+TGG - chr6.3:53525419-53525438 MS.gene34550:intron 15.0%
!!! CATGTTAGTAATTATTATTT+TGG - chr6.3:53525852-53525871 MS.gene34550:CDS 15.0%
!!! TAAATTTGGTTTACATTTTT+GGG - chr6.3:53525420-53525439 MS.gene34550:intron 15.0%
!!! TGATGATGTTTTTTTTTTTT+TGG - chr6.3:53526316-53526335 MS.gene34550:intron 15.0%
!!! TTATTTTAGTCTTTGAAATA+TGG - chr6.3:53523865-53523884 MS.gene34550:intron 15.0%
!!! TTTTCAAAATAATTTAGTAC+AGG + chr6.3:53525104-53525123 None:intergenic 15.0%
!!! TTTTTTCTTTTGATGATATA+TGG + chr6.3:53523438-53523457 None:intergenic 15.0%
!! AAAAAAGTTAACAATCAACT+TGG - chr6.3:53526084-53526103 MS.gene34550:intron 20.0%
!! AAAAAATGCAATAATTTGGA+AGG + chr6.3:53524622-53524641 None:intergenic 20.0%
!! AAAAATGCAATAATTTGGAA+GGG + chr6.3:53524621-53524640 None:intergenic 20.0%
!! AAAATTCTTATACTGTGATT+TGG + chr6.3:53526721-53526740 None:intergenic 20.0%
!! AACAAGTTATATATCTTAAG+AGG + chr6.3:53524846-53524865 None:intergenic 20.0%
!! ACTACAAATTATGATTTGAT+TGG + chr6.3:53524742-53524761 None:intergenic 20.0%
!! ATAAAAAATTCAAACACAAG+AGG + chr6.3:53524517-53524536 None:intergenic 20.0%
!! ATATTAGAATCTTTATAGCA+CGG + chr6.3:53524026-53524045 None:intergenic 20.0%
!! ATCCAATAAATACAACTATT+TGG + chr6.3:53525387-53525406 None:intergenic 20.0%
!! TAATTCTAACATATGAAACA+TGG - chr6.3:53523901-53523920 MS.gene34550:intron 20.0%
!! TCTTATATATAGAGATTAGT+GGG + chr6.3:53525229-53525248 None:intergenic 20.0%
!! TTACTTAAAACAACATTTCA+AGG - chr6.3:53524083-53524102 MS.gene34550:CDS 20.0%
!! TTATAAATCATGGAATCATA+GGG + chr6.3:53525355-53525374 None:intergenic 20.0%
!! TTCTTATATATAGAGATTAG+TGG + chr6.3:53525230-53525249 None:intergenic 20.0%
!!! AATATTTGAGATGTGATAAA+GGG - chr6.3:53524675-53524694 MS.gene34550:intron 20.0%
!!! ACTTGTTAAATATCCTATTT+GGG - chr6.3:53526170-53526189 MS.gene34550:intron 20.0%
!!! CATAATTTGTAGTATTAAAG+TGG - chr6.3:53524749-53524768 MS.gene34550:intron 20.0%
!!! GAAATGTTGTTTTAAGTAAT+TGG + chr6.3:53524082-53524101 None:intergenic 20.0%
!!! TATGTTTTTCATTTAGTGTA+AGG - chr6.3:53525522-53525541 MS.gene34550:intron 20.0%
!!! TTATTATTTTGGTCACTTTT+AGG - chr6.3:53525863-53525882 MS.gene34550:CDS 20.0%
!!! TTATTTTGGTGTTTGAAATA+TGG - chr6.3:53523567-53523586 MS.gene34550:intron 20.0%
!!! TTGCAATCTAAATGATTTTT+TGG + chr6.3:53524419-53524438 None:intergenic 20.0%
!!! TTTGGTTCCTTTTTTTTAAA+GGG - chr6.3:53526334-53526353 MS.gene34550:intron 20.0%
!!! TTTTGGTTCCTTTTTTTTAA+AGG - chr6.3:53526333-53526352 MS.gene34550:intron 20.0%
! AAACCATGTATTAAGTGTTA+GGG + chr6.3:53526758-53526777 None:intergenic 25.0%
! AAGAAAACTATACCATATTC+AGG + chr6.3:53523410-53523429 None:intergenic 25.0%
! AAGTTTGGTTAAAAGATGTT+AGG - chr6.3:53524568-53524587 MS.gene34550:intron 25.0%
! AATAAGCATTCATGTCTAAT+AGG + chr6.3:53526131-53526150 None:intergenic 25.0%
! AATTAATTCTAACCTAAGCA+CGG - chr6.3:53523600-53523619 MS.gene34550:intron 25.0%
! AATTTGACCTTATAATCTGA+AGG + chr6.3:53526583-53526602 None:intergenic 25.0%
! ATCAACTATAGTTAGTTGAT+AGG - chr6.3:53525155-53525174 MS.gene34550:intron 25.0%
! ATGTAATGTCTTTATCACTA+CGG + chr6.3:53525572-53525591 None:intergenic 25.0%
! ATGTATACCTGTCATTATAA+AGG + chr6.3:53526446-53526465 None:intergenic 25.0%
! ATTAGACATGAATGCTTATT+TGG - chr6.3:53526131-53526150 MS.gene34550:intron 25.0%
! ATTGCAAATTCACTCAAAAT+AGG - chr6.3:53524432-53524451 MS.gene34550:intron 25.0%
! ATTTACTCTGTTGAATTAGA+TGG - chr6.3:53524185-53524204 MS.gene34550:CDS 25.0%
! ATTTGACCTTATAATCTGAA+GGG + chr6.3:53526582-53526601 None:intergenic 25.0%
! GTTATAAATCATGGAATCAT+AGG + chr6.3:53525356-53525375 None:intergenic 25.0%
! TAAACCATGTATTAAGTGTT+AGG + chr6.3:53526759-53526778 None:intergenic 25.0%
! TAGAGATGATGTAGATATAT+TGG - chr6.3:53526895-53526914 MS.gene34550:CDS 25.0%
! TCTATATATTGTTTGGATAG+AGG + chr6.3:53525670-53525689 None:intergenic 25.0%
! TGATTGGAATGTATCATAAT+TGG - chr6.3:53526256-53526275 MS.gene34550:intron 25.0%
! TTAGACATGAATGCTTATTT+GGG - chr6.3:53526132-53526151 MS.gene34550:intron 25.0%
!! AAAGTAAAGAGCATAATCAA+TGG - chr6.3:53526920-53526939 MS.gene34550:CDS 25.0%
!! ACACATGAGTTAAACATTTT+CGG + chr6.3:53526673-53526692 None:intergenic 25.0%
!! AGGTAACCGATAATTTTTAA+AGG - chr6.3:53524974-53524993 MS.gene34550:intron 25.0%
!! ATCCAAACCCTTTAAAAAAA+AGG + chr6.3:53526344-53526363 None:intergenic 25.0%
!! CACTTGTTAAATATCCTATT+TGG - chr6.3:53526169-53526188 MS.gene34550:intron 25.0%
!! CTAAATAGTATTGTCATTTG+AGG + chr6.3:53527041-53527060 None:intergenic 25.0%
!! GAATATTTGAGATGTGATAA+AGG - chr6.3:53524674-53524693 MS.gene34550:intron 25.0%
!! GAATTTTCTCCAAACTTTAA+TGG + chr6.3:53525453-53525472 None:intergenic 25.0%
!! GCTTACATTTTATTGAAGTT+TGG - chr6.3:53524553-53524572 MS.gene34550:intron 25.0%
!! TTTAGCTACATTCTCAATTT+TGG + chr6.3:53524342-53524361 None:intergenic 25.0%
!!! TATTTGCTGTGAAGAAATAT+TGG - chr6.3:53527005-53527024 MS.gene34550:CDS 25.0%
!!! TTCCTTTTTTTTAAAGGGTT+TGG - chr6.3:53526339-53526358 MS.gene34550:intron 25.0%
!!! TTGGATTTTAATTGTTTTGC+AGG - chr6.3:53526358-53526377 MS.gene34550:intron 25.0%
!!! TTTTAAGTAATTGGTGTTTC+AGG + chr6.3:53524073-53524092 None:intergenic 25.0%
AAAAGTTTCTCTCTTTCAAG+AGG + chr6.3:53526986-53527005 None:intergenic 30.0%
AACAAAGAAGAAATTTCAGG+TGG - chr6.3:53525931-53525950 MS.gene34550:CDS 30.0%
ACCTGAAATTTCTTCTTTGT+TGG + chr6.3:53525932-53525951 None:intergenic 30.0%
AGAATAATCCTGATAAAGCA+TGG - chr6.3:53524471-53524490 MS.gene34550:intron 30.0%
ATTGTCAACCAAATGATTCT+AGG - chr6.3:53524954-53524973 MS.gene34550:intron 30.0%
CAATATTTCTTCCAACGAAT+TGG + chr6.3:53524275-53524294 None:intergenic 30.0%
CAATTCGTTGGAAGAAATAT+TGG - chr6.3:53524273-53524292 MS.gene34550:CDS 30.0%
CCTTTGTTGGAATAAAATAG+TGG - chr6.3:53524364-53524383 MS.gene34550:intron 30.0%
CTATATCCCTTCAGATTATA+AGG - chr6.3:53526573-53526592 MS.gene34550:intron 30.0%
GAAGAAATATTGGAAAGGAT+GGG - chr6.3:53524283-53524302 MS.gene34550:CDS 30.0%
GGCCAAATAGTTGTATTTAT+TGG - chr6.3:53525382-53525401 MS.gene34550:intron 30.0%
TACTCACTACTATAAATGTG+TGG - chr6.3:53525061-53525080 MS.gene34550:intron 30.0%
TAGACTCATTAGAAAATGAG+TGG + chr6.3:53524790-53524809 None:intergenic 30.0%
TATATCACGTGATAGTAGAT+AGG + chr6.3:53523225-53523244 None:intergenic 30.0%
TCCAACAAAGAAGAAATTTC+AGG - chr6.3:53525928-53525947 MS.gene34550:CDS 30.0%
TCCATGATTTATAACAGATG+TGG - chr6.3:53525361-53525380 MS.gene34550:intron 30.0%
TCTCAAAAGACAATCAACTA+TGG - chr6.3:53526040-53526059 MS.gene34550:intron 30.0%
TGAATTAGGTCATAAGTTCT+AGG + chr6.3:53526405-53526424 None:intergenic 30.0%
TTGACAATTTACTCTTCACT+TGG + chr6.3:53524942-53524961 None:intergenic 30.0%
TTGGAGCAATATATGAAAGA+GGG - chr6.3:53526232-53526251 MS.gene34550:intron 30.0%
! ACAAAGAAGAAATTTCAGGT+GGG - chr6.3:53525932-53525951 MS.gene34550:CDS 30.0%
! ACCAACATTTGTTAGTTGAA+AGG + chr6.3:53525792-53525811 None:intergenic 30.0%
! AGAAAGGTGATATTGCTATT+TGG - chr6.3:53524387-53524406 MS.gene34550:intron 30.0%
! ATATATGAAAGAGGGTTGAT+TGG - chr6.3:53526240-53526259 MS.gene34550:intron 30.0%
! CCAACATTTGTTAGTTGAAA+GGG + chr6.3:53525791-53525810 None:intergenic 30.0%
! CCACTATTTTATTCCAACAA+AGG + chr6.3:53524367-53524386 None:intergenic 30.0%
! TGGAATAAAATAGTGGAGAA+AGG - chr6.3:53524371-53524390 MS.gene34550:intron 30.0%
! TGTTTAGCCTTTATAATGAC+AGG - chr6.3:53526436-53526455 MS.gene34550:intron 30.0%
!! GTATCAACTTTAGCTTGAAT+AGG + chr6.3:53526210-53526229 None:intergenic 30.0%
!! TAGTTAGTTGATAGGTTAAC+TGG - chr6.3:53525163-53525182 MS.gene34550:intron 30.0%
!! TTGTCTTTTGAGAATGTTTG+AGG + chr6.3:53526033-53526052 None:intergenic 30.0%
!!! TTGGTTAGCTGTTTTGAAAT+TGG + chr6.3:53525751-53525770 None:intergenic 30.0%
AAATTGTGGACCATGAAGAT+GGG - chr6.3:53526960-53526979 MS.gene34550:CDS 35.0%
AACAATCAACTTGGAAAAGC+TGG - chr6.3:53526093-53526112 MS.gene34550:intron 35.0%
AATGTCCGAATCTTGTAGTA+CGG + chr6.3:53523762-53523781 None:intergenic 35.0%
ACACAGAATCAGCATGAATT+AGG + chr6.3:53526419-53526438 None:intergenic 35.0%
ACCACATTCATAACCCAAAT+AGG + chr6.3:53526186-53526205 None:intergenic 35.0%
ACGCATAGTCTCTAGTAATT+TGG + chr6.3:53523841-53523860 None:intergenic 35.0%
ACTCCCTAACACTTAATACA+TGG - chr6.3:53526752-53526771 MS.gene34550:intron 35.0%
ATCGGTTACCTAGAATCATT+TGG + chr6.3:53524965-53524984 None:intergenic 35.0%
ATGTAGCTAAAAGCCTTTGT+TGG - chr6.3:53524351-53524370 MS.gene34550:CDS 35.0%
ATTGGCAGAAATTAAGTGTG+AGG + chr6.3:53525815-53525834 None:intergenic 35.0%
ATTTCAAAGGGGACCATTAA+AGG - chr6.3:53526000-53526019 MS.gene34550:CDS 35.0%
CCCTTTCAACTAACAAATGT+TGG - chr6.3:53525788-53525807 MS.gene34550:CDS 35.0%
CGCATAGTCTCTAGTAATTT+GGG + chr6.3:53523840-53523859 None:intergenic 35.0%
CGTTGGAAGAAATATTGGAA+AGG - chr6.3:53524278-53524297 MS.gene34550:CDS 35.0%
CTAATTATCACACTTCCTTC+TGG + chr6.3:53526878-53526897 None:intergenic 35.0%
CTTCTTTGTTGGACACTTTA+GGG + chr6.3:53525921-53525940 None:intergenic 35.0%
CTTGGAGCAATATATGAAAG+AGG - chr6.3:53526231-53526250 MS.gene34550:intron 35.0%
CTTTATGAGTATCTTCCTCA+TGG - chr6.3:53525286-53525305 MS.gene34550:intron 35.0%
GCCACATCTGTTATAAATCA+TGG + chr6.3:53525365-53525384 None:intergenic 35.0%
GGAAGAAATATTGGAAAGGA+TGG - chr6.3:53524282-53524301 MS.gene34550:CDS 35.0%
GTTAACTGGAGTTAGTAGTT+TGG - chr6.3:53525177-53525196 MS.gene34550:intron 35.0%
TATCAGGATTATTCTGCTCT+TGG + chr6.3:53524466-53524485 None:intergenic 35.0%
TATTTCTTCCAACGAATTGG+TGG + chr6.3:53524272-53524291 None:intergenic 35.0%
TCATGGAATCATAGGGAATA+AGG + chr6.3:53525348-53525367 None:intergenic 35.0%
TCTGCTTTGTAGATGTGAAT+TGG - chr6.3:53526817-53526836 MS.gene34550:intron 35.0%
TCTTCTTTGTTGGACACTTT+AGG + chr6.3:53525922-53525941 None:intergenic 35.0%
TTATTCTGCTCTTGGCAAAA+AGG + chr6.3:53524458-53524477 None:intergenic 35.0%
TTGTTAGTTGAAAGGGACTT+GGG + chr6.3:53525784-53525803 None:intergenic 35.0%
TTTGTTAGTTGAAAGGGACT+TGG + chr6.3:53525785-53525804 None:intergenic 35.0%
! AAAGAGCATAATCAATGGCT+TGG - chr6.3:53526925-53526944 MS.gene34550:CDS 35.0%
! ATAGTATTGTCATTTGAGGC+AGG + chr6.3:53527037-53527056 None:intergenic 35.0%
! CAAAGAAGAAATTTCAGGTG+GGG - chr6.3:53525933-53525952 MS.gene34550:CDS 35.0%
! CATAATCAATGGCTTGGAAT+GGG - chr6.3:53526931-53526950 MS.gene34550:CDS 35.0%
! GTTACATTAGATGCCATTTG+TGG - chr6.3:53524590-53524609 MS.gene34550:intron 35.0%
! GTTCAATTTGCTCTTGAAAG+AGG - chr6.3:53523287-53523306 MS.gene34550:CDS 35.0%
! TCCTATTTGGGTTATGAATG+TGG - chr6.3:53526182-53526201 MS.gene34550:intron 35.0%
!! CAAGCTAAAGTTGATACACT+TGG - chr6.3:53526213-53526232 MS.gene34550:intron 35.0%
AACAGTGTCAATTGCTCCAA+GGG - chr6.3:53523247-53523266 MS.gene34550:CDS 40.0%
ACATGTTGCTAGAGATGGAT+AGG - chr6.3:53526843-53526862 MS.gene34550:intron 40.0%
ACTATACCATATTCAGGCCA+TGG + chr6.3:53523404-53523423 None:intergenic 40.0%
AGAACAATGTGCCATGTCAA+AGG + chr6.3:53523369-53523388 None:intergenic 40.0%
AGATGTGATAAAGGGTGAAG+AGG - chr6.3:53524683-53524702 MS.gene34550:intron 40.0%
AGCACATACCATGCTTTATC+AGG + chr6.3:53524482-53524501 None:intergenic 40.0%
AGTGTCCGTACTACAAGATT+CGG - chr6.3:53523754-53523773 MS.gene34550:intron 40.0%
ATAGAATTCTACGTCCTGGT+GGG - chr6.3:53524228-53524247 MS.gene34550:CDS 40.0%
ATGAGTATCTTCCTCATGGA+TGG - chr6.3:53525290-53525309 MS.gene34550:intron 40.0%
ATGAGTGTGCAGATCTTACA+AGG - chr6.3:53524885-53524904 MS.gene34550:intron 40.0%
CAAATTGTGGACCATGAAGA+TGG - chr6.3:53526959-53526978 MS.gene34550:CDS 40.0%
CAAGTATAAGACCATCCATG+AGG + chr6.3:53525304-53525323 None:intergenic 40.0%
CACATCTACAAAGCAGAATC+AGG + chr6.3:53526814-53526833 None:intergenic 40.0%
CAGGTGGGGAATTAAACAAT+TGG - chr6.3:53525947-53525966 MS.gene34550:CDS 40.0%
CTTATTCCATGGCCTGAATA+TGG - chr6.3:53523395-53523414 MS.gene34550:CDS 40.0%
GACATGAATGCTTATTTGGG+TGG - chr6.3:53526135-53526154 MS.gene34550:intron 40.0%
GATAGGATTCTTAGACCAGA+AGG - chr6.3:53526860-53526879 MS.gene34550:CDS 40.0%
GCAAAGACACCAATAATTGC+AGG + chr6.3:53523317-53523336 None:intergenic 40.0%
GGCGTGTATCCATTAAAGTT+TGG - chr6.3:53525441-53525460 MS.gene34550:intron 40.0%
TAACAGTGTCAATTGCTCCA+AGG - chr6.3:53523246-53523265 MS.gene34550:CDS 40.0%
TTGAGGTGTGACACCTTTAA+TGG + chr6.3:53526016-53526035 None:intergenic 40.0%
TTGGAAAAGCTGGTAGATAC+AGG - chr6.3:53526103-53526122 MS.gene34550:intron 40.0%
TTGTTCATTCGTGAGTTCAG+TGG + chr6.3:53526610-53526629 None:intergenic 40.0%
! GCACACTCATTTGATAGTAG+AGG + chr6.3:53524875-53524894 None:intergenic 40.0%
! GCATAATCAATGGCTTGGAA+TGG - chr6.3:53526930-53526949 MS.gene34550:CDS 40.0%
! GTTCTCGTTGTCTTATTCCA+TGG - chr6.3:53523384-53523403 MS.gene34550:CDS 40.0%
! GTTGATAGAATTCTACGTCC+TGG - chr6.3:53524224-53524243 MS.gene34550:CDS 40.0%
!! AGAGGTGTTCCTGCAATTAT+TGG - chr6.3:53523305-53523324 MS.gene34550:CDS 40.0%
!! GGACTTGGGTTTGTTATACT+TGG + chr6.3:53525770-53525789 None:intergenic 40.0%
!! GGGGTTGATTTTAGTCTTTG+AGG + chr6.3:53525973-53525992 None:intergenic 40.0%
AACCCCACCTAGGATTTCAA+AGG - chr6.3:53525987-53526006 MS.gene34550:CDS 45.0%
ACCCCACCTAGGATTTCAAA+GGG - chr6.3:53525988-53526007 MS.gene34550:CDS 45.0%
GACTAAAATCAACCCCACCT+AGG - chr6.3:53525977-53525996 MS.gene34550:CDS 45.0%
GATAGAATCCAATACCCACC+AGG + chr6.3:53524245-53524264 None:intergenic 45.0%
GATAGAATTCTACGTCCTGG+TGG - chr6.3:53524227-53524246 MS.gene34550:CDS 45.0%
GGAAGACATGTTGCTAGAGA+TGG - chr6.3:53526838-53526857 MS.gene34550:intron 45.0%
GGAATGGGAGAGTCAAATTG+TGG - chr6.3:53526946-53526965 MS.gene34550:CDS 45.0%
GTCAGTGTTTGTACCGTGTT+AGG + chr6.3:53523633-53523652 None:intergenic 45.0%
TATCTGGTCCACCAATTCGT+TGG - chr6.3:53524261-53524280 MS.gene34550:CDS 45.0%
TTAGGTGTTTGTCCGTGCTT+AGG + chr6.3:53523615-53523634 None:intergenic 45.0%
TTTCAAGAGGCCCATCTTCA+TGG + chr6.3:53526973-53526992 None:intergenic 45.0%
! ATTGTCATTTGAGGCAGGAG+AGG + chr6.3:53527032-53527051 None:intergenic 45.0%
! TTGTTGGACACTTTAGGGAG+TGG + chr6.3:53525916-53525935 None:intergenic 45.0%
!! ATGGTCCCCTTTGAAATCCT+AGG + chr6.3:53525997-53526016 None:intergenic 45.0%
!! CCATGTCAAAGGCTCTAGAA+GGG + chr6.3:53523358-53523377 None:intergenic 45.0%
!! GGTGGGTATTGGATTCTATC+TGG - chr6.3:53524245-53524264 MS.gene34550:CDS 45.0%
!! TCAAAGGCTCTAGAAGGGAA+AGG + chr6.3:53523353-53523372 None:intergenic 45.0%
!! TCCCCTTTGAAATCCTAGGT+GGG + chr6.3:53525993-53526012 None:intergenic 45.0%
!! GAAAAAAAAAAAAAATTAAT+TGG + chr6.3:53525833-53525852 None:intergenic 5.0%
CAGTGTGTGTGTGTCTTGTC+TGG + chr6.3:53523934-53523953 None:intergenic 50.0%
CCCCACCTAGGATTTCAAAG+GGG - chr6.3:53525989-53526008 MS.gene34550:CDS 50.0%
GCACGGACAAACACCTAACA+CGG - chr6.3:53523617-53523636 MS.gene34550:intron 50.0%
TGGAAGGGAGTCTCCACAAA+TGG + chr6.3:53524606-53524625 None:intergenic 50.0%
TGTGCTTCATGAGTGTCCCT+TGG + chr6.3:53523266-53523285 None:intergenic 50.0%
! TTCTACGTCCTGGTGGGTAT+TGG - chr6.3:53524234-53524253 MS.gene34550:CDS 50.0%
!! CCCCTTTGAAATCCTAGGTG+GGG + chr6.3:53525992-53526011 None:intergenic 50.0%
!! CCCTTCTAGAGCCTTTGACA+TGG - chr6.3:53523355-53523374 MS.gene34550:CDS 50.0%
!! GCCATGTCAAAGGCTCTAGA+AGG + chr6.3:53523359-53523378 None:intergenic 50.0%
!! GTCCCCTTTGAAATCCTAGG+TGG + chr6.3:53525994-53526013 None:intergenic 50.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 53523200 53527060 53523200 ID=MS.gene34550
chr6.3 mRNA 53523200 53527060 53523200 ID=MS.gene34550.t1;Parent=MS.gene34550
chr6.3 exon 53526844 53527060 53526844 ID=MS.gene34550.t1.exon1;Parent=MS.gene34550.t1
chr6.3 CDS 53526844 53527060 53526844 ID=cds.MS.gene34550.t1;Parent=MS.gene34550.t1
chr6.3 exon 53525768 53526056 53525768 ID=MS.gene34550.t1.exon2;Parent=MS.gene34550.t1
chr6.3 CDS 53525768 53526056 53525768 ID=cds.MS.gene34550.t1;Parent=MS.gene34550.t1
chr6.3 exon 53523983 53524375 53523983 ID=MS.gene34550.t1.exon3;Parent=MS.gene34550.t1
chr6.3 CDS 53523983 53524375 53523983 ID=cds.MS.gene34550.t1;Parent=MS.gene34550.t1
chr6.3 exon 53523803 53523880 53523803 ID=MS.gene34550.t1.exon4;Parent=MS.gene34550.t1
chr6.3 CDS 53523803 53523880 53523803 ID=cds.MS.gene34550.t1;Parent=MS.gene34550.t1
chr6.3 exon 53523200 53523431 53523200 ID=MS.gene34550.t1.exon5;Parent=MS.gene34550.t1
chr6.3 CDS 53523200 53523431 53523200 ID=cds.MS.gene34550.t1;Parent=MS.gene34550.t1
Gene Sequence

>MS.gene34550

ATGCAGGTTGCTAGTTGGGGAGCCTATCTACTATCACGTGATATATTAACAGTGTCAATTGCTCCAAGGGACACTCATGAAGCACAAGTTCAATTTGCTCTTGAAAGAGGTGTTCCTGCAATTATTGGTGTCTTTGCTTCAAAGAGATTACCTTTCCCTTCTAGAGCCTTTGACATGGCACATTGTTCTCGTTGTCTTATTCCATGGCCTGAATATGGTATAGTTTTCTTACTCACCATATATCATCAAAAGAAAAAATTAATTTTTTTTTAAAATGTTTAAATGCCTTATTTTGTCTATTATATACATAAGATTTTTCACTTTAATGTCTCTAAGAATATGTGTAACATCCTAAAAAAGTGTAACATTATTTTGGTGTTTGAAATATGGACTATATAAAAATTAATTCTAACCTAAGCACGGACAAACACCTAACACGGTACAAACACTGACACGTTGACATCGATAGATCAACGTAATTTACATGTGTCTGTGTTGTGTCGAATTGAAATACTAACACATATATCGAACATTGAAGCACACATTTGATTAGAAGTGTCCGTACTACAAGATTCGGACATTATTTCGTCTATCATATACATATATACTATTCTTCACTTATAAGTCTCTAAGACAACCCAAATTACTAGAGACTATGCGTAACCTTATTTTAGTCTTTGAAATATGGACTATATAAAGATTAATTCTAACATATGAAACATGGACAAACACCAGACAAGACACACACACACTGACATATTTTAACATTTAATTACATGTGTCTGTGTTGTTTACATTGAAATATGTCTTTGATTAGAAGTGTCCGTGCTATAAAGATTCTAATATAGTTCATACATTAAAAGGACTAAACCTGAAACACCAATTACTTAAAACAACATTTCAAGGACTAGAATATTATTTTTCATAGAAATTAAAGTATGAAGAATTATGATTCAACATTAACATGTGTTTGATTTTTTTTTTTATTTACTCTGTTGAATTAGATGGACTTTATCTAAATGAAGTTGATAGAATTCTACGTCCTGGTGGGTATTGGATTCTATCTGGTCCACCAATTCGTTGGAAGAAATATTGGAAAGGATGGGAAAGAACAAAAGAAGACTTGAATGAAGAGCAAACCAAAATTGAGAATGTAGCTAAAAGCCTTTGTTGGAATAAAATAGTGGAGAAAGGTGATATTGCTATTTGGCAGAAACCAAAAAATCATTTAGATTGCAAATTCACTCAAAATAGGCCTTTTTGCCAAGAGCAGAATAATCCTGATAAAGCATGGTATGTGCTTCATTTTTCTATCCTCTTGTGTTTGAATTTTTTATTTTTATTTATGCTTATGCTTACATTTTATTGAAGTTTGGTTAAAAGATGTTAGGTTACATTAGATGCCATTTGTGGAGACTCCCTTCCAAATTATTGCATTTTTTTGTACATAGAATATTATCACATGTCTTGAATAGAATATTTGAGATGTGATAAAGGGTGAAGAGGTTAGTTATCATAAGTTACACTTTTTATTGTCATCCAATCAAATCATAATTTGTAGTATTAAAGTGGTTTGTTGACTTACAACCACTCATTTTCTAATGAGTCTAAGTAGCAACTTACATCTAAAAATTTGATAAATACCTCTTAAGATATATAACTTGTTAATTTACCTCTACTATCAAATGAGTGTGCAGATCTTACAAGGATTTTTTTAACTAGACTCACTCAATTTTCAACCAAGTGAAGAGTAAATTGTCAACCAAATGATTCTAGGTAACCGATAATTTTTAAAGGATATAAATTGATAAATTATAGCTGATAAATTGTCAAATGCTTCTAAAAGTGCAAGTTGCTAATTTACTCACTACTATAAATGTGTGGATGTAAATTAAGAAATCCCTGTACTAAATTATTTTGAAAAGTAACATAATGATGTTATTATAGTATGAATAATCAACTATAGTTAGTTGATAGGTTAACTGGAGTTAGTAGTTTGGTTAGAAGTTAGTTAGAGTTAGTTACTCCCACTAATCTCTATATATAAGAATATCATTGTACTCATTCATCATTTCACTATATGAATCTTTATGAGTATCTTCCTCATGGATGGTCTTATACTTGTTTTCTTGCTGATCATTATGACCTTATTCCCTATGATTCCATGATTTATAACAGATGTGGCCAAATAGTTGTATTTATTGGATGACAATATAAACATAAATTTGGTTTACATTTTTGGGCGTGTATCCATTAAAGTTTGGAGAAAATTCATATTGTATGAGATGATTCACTTTTTCTTATCCAATTATTTTTTATTCTTATGTTTTTCATTTAGTGTAAGGTCTACTTCTTTTATGCTGTTCTATCCGTAGTGATAAAGACATTACATCATTAATTTATTTTTTTTCTTATGATTTCTTCAACTAAACAAATTTAGAGATTTATTTCAATTTTAAATACTCTTCCTCTATCCAAACAATATATAGAATTCATTAATTATCTATTTATTTATCTATTTTTATCCATTTGTTATCTGTAAATTTTTCCAATTTCAAAACAGCTAACCAAGTATAACAAACCCAAGTCCCTTTCAACTAACAAATGTTGGTCCTCACACTTAATTTCTGCCAATTAATTTTTTTTTTTTTTCATGTTAGTAATTATTATTTTGGTCACTTTTAGGTACACAAACATGCAAACATGTTTAAATCCACTCCCTAAAGTGTCCAACAAAGAAGAAATTTCAGGTGGGGAATTAAACAATTGGCCTCAAAGACTAAAATCAACCCCACCTAGGATTTCAAAGGGGACCATTAAAGGTGTCACACCTCAAACATTCTCAAAAGACAATCAACTATGGAACAAAAGAGTATCATATTACAAAAAAGTTAACAATCAACTTGGAAAAGCTGGTAGATACAGGAACCTATTAGACATGAATGCTTATTTGGGTGGATTTGCTGCTTCACTTGTTAAATATCCTATTTGGGTTATGAATGTGGTTCCTATTCAAGCTAAAGTTGATACACTTGGAGCAATATATGAAAGAGGGTTGATTGGAATGTATCATAATTGGTTAGTCAATTTTTTTTTTGTAGTTGTACTTTTTGTTTTGATGATGTTTTTTTTTTTTTGGTTCCTTTTTTTTAAAGGGTTTGGATTTTAATTGTTTTGCAGGTGTGAAGCTATGTCTACTTATCCTAGAACTTATGACCTAATTCATGCTGATTCTGTGTTTAGCCTTTATAATGACAGGTATACATTTATTTTATGTTATAGGATTTTATAAAAAAAATTGGAAAAAGAGAAAATTATTAATGATTTAAGTAACACTAATATTCATTTTACAATCGTCTCTGAGATATTTGAACTATATCCCTTCAGATTATAAGGTCAAATTCTTACCACTGAACTCACGAATGAACAAAAAAATTGTTATAGGATTTAGCTTTCAAGCTAATGTTTAACCGAAAATGTTTAACTCATGTGTAATTTTTATTTAAACATTCATTCAACCAAATCACAGTATAAGAATTTTGCTAGCAACACACTCCCTAACACTTAATACATGGTTTAAAAGATTCAAATCCTTTAAAATCTAATTATAACCTGATTCTGCTTTGTAGATGTGAATTGGAAGACATGTTGCTAGAGATGGATAGGATTCTTAGACCAGAAGGAAGTGTGATAATTAGAGATGATGTAGATATATTGGTCAAAGTAAAGAGCATAATCAATGGCTTGGAATGGGAGAGTCAAATTGTGGACCATGAAGATGGGCCTCTTGAAAGAGAGAAACTTTTATTTGCTGTGAAGAAATATTGGACCTCTCCTGCCTCAAATGACAATACTATTTAG
Protein sequence

>MS.gene34550.t1

MQVASWGAYLLSRDILTVSIAPRDTHEAQVQFALERGVPAIIGVFASKRLPFPSRAFDMAHCSRCLIPWPEYDGLYLNEVDRILRPGGYWILSGPPIRWKKYWKGWERTKEDLNEEQTKIENVAKSLCWNKIVEKGDIAIWQKPKNHLDCKFTQNRPFCQEQNNPDKAWYTNMQTCLNPLPKVSNKEEISGGELNNWPQRLKSTPPRISKGTIKGVTPQTFSKDNQLWNKRVSYYKKVNNQLGKAGRYRNLLDMNAYLGGFAASLVKYPIWVMNVVPIQAKVDTLGAIYERGLIGMYHNWCEAMSTYPRTYDLIHADSVFSLYNDRCELEDMLLEMDRILRPEGSVIIRDDVDILVKVKSIINGLEWESQIVDHEDGPLEREKLLFAVKKYWTSPASNDNTI