Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34920.t1 | RHN42395.1 | 96.2 | 368 | 14 | 0 | 1 | 368 | 1 | 368 | 7.60E-195 | 689.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34920.t1 | Q9LRR9 | 86.4 | 360 | 49 | 0 | 4 | 363 | 3 | 362 | 2.7e-177 | 622.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34920.t1 | A0A396GUC2 | 96.2 | 368 | 14 | 0 | 1 | 368 | 1 | 368 | 5.5e-195 | 689.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052922 | MS.gene34920 | 0.808928 | 2.43E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34920.t1 | MTR_2g070420 | 85.246 | 366 | 54 | 0 | 1 | 366 | 1 | 366 | 0.0 | 635 |
| MS.gene34920.t1 | MTR_1g072440 | 63.529 | 85 | 29 | 1 | 10 | 94 | 4 | 86 | 8.34e-30 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34920.t1 | AT4G18360 | 86.275 | 357 | 49 | 0 | 4 | 360 | 3 | 359 | 0.0 | 643 |
| MS.gene34920.t1 | AT4G18360 | 86.275 | 357 | 49 | 0 | 4 | 360 | 3 | 359 | 0.0 | 643 |
| MS.gene34920.t1 | AT3G14420 | 86.389 | 360 | 49 | 0 | 4 | 363 | 3 | 362 | 0.0 | 635 |
| MS.gene34920.t1 | AT3G14420 | 86.389 | 360 | 49 | 0 | 4 | 363 | 3 | 362 | 0.0 | 635 |
| MS.gene34920.t1 | AT3G14420 | 85.479 | 365 | 53 | 0 | 4 | 368 | 3 | 367 | 0.0 | 634 |
| MS.gene34920.t1 | AT3G14415 | 83.014 | 365 | 62 | 0 | 4 | 368 | 3 | 367 | 0.0 | 622 |
| MS.gene34920.t1 | AT3G14415 | 83.014 | 365 | 62 | 0 | 4 | 368 | 3 | 367 | 0.0 | 622 |
| MS.gene34920.t1 | AT3G14415 | 81.671 | 371 | 62 | 1 | 4 | 368 | 3 | 373 | 0.0 | 616 |
| MS.gene34920.t1 | AT3G14420 | 85.632 | 348 | 50 | 0 | 21 | 368 | 1 | 348 | 0.0 | 605 |
| MS.gene34920.t1 | AT4G18360 | 85.256 | 312 | 46 | 0 | 4 | 315 | 3 | 314 | 0.0 | 555 |
| MS.gene34920.t1 | AT3G14420 | 85.047 | 321 | 48 | 0 | 48 | 368 | 40 | 360 | 0.0 | 549 |
| MS.gene34920.t1 | AT3G14420 | 86.076 | 316 | 44 | 0 | 48 | 363 | 46 | 361 | 0.0 | 548 |
| MS.gene34920.t1 | AT3G14130 | 61.773 | 361 | 135 | 1 | 1 | 361 | 1 | 358 | 1.71e-157 | 449 |
| MS.gene34920.t1 | AT3G14130 | 61.773 | 361 | 135 | 1 | 1 | 361 | 1 | 358 | 1.71e-157 | 449 |
| MS.gene34920.t1 | AT3G14150 | 60.388 | 361 | 140 | 1 | 1 | 361 | 1 | 358 | 1.10e-153 | 439 |
| MS.gene34920.t1 | AT3G14150 | 60.388 | 361 | 140 | 1 | 1 | 361 | 1 | 358 | 1.10e-153 | 439 |
| MS.gene34920.t1 | AT4G18360 | 85.833 | 240 | 34 | 0 | 4 | 243 | 3 | 242 | 6.94e-151 | 428 |
| MS.gene34920.t1 | AT3G14130 | 62.102 | 314 | 116 | 1 | 48 | 361 | 4 | 314 | 2.24e-134 | 389 |
| MS.gene34920.t1 | AT3G14130 | 61.508 | 252 | 94 | 1 | 110 | 361 | 2 | 250 | 4.32e-107 | 317 |
| MS.gene34920.t1 | AT3G14150 | 59.341 | 273 | 108 | 1 | 89 | 361 | 3 | 272 | 4.82e-107 | 318 |
| MS.gene34920.t1 | AT3G14150 | 59.341 | 273 | 108 | 1 | 89 | 361 | 3 | 272 | 4.82e-107 | 318 |
| MS.gene34920.t1 | AT3G14150 | 59.341 | 273 | 108 | 1 | 89 | 361 | 3 | 272 | 4.82e-107 | 318 |
| MS.gene34920.t1 | AT3G14150 | 59.524 | 252 | 99 | 1 | 110 | 361 | 2 | 250 | 9.95e-104 | 308 |
| MS.gene34920.t1 | AT3G14150 | 59.524 | 252 | 99 | 1 | 110 | 361 | 2 | 250 | 9.95e-104 | 308 |
Find 109 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTCTAGCCTCTTATGTTTC+TGG | 0.102487 | 4.1:+16064707 | MS.gene34920:CDS |
| GGTTCAGGCCGCGAATTCTT+AGG | 0.233661 | 4.1:+16063254 | MS.gene34920:intron |
| GAAAATTAGAAGGGGAATTC+TGG | 0.249466 | 4.1:+16067069 | MS.gene34920:CDS |
| AGTACACCCTTCACTAAAAT+TGG | 0.271781 | 4.1:-16064891 | None:intergenic |
| TCCTTGCAGACTAATGATTC+TGG | 0.294729 | 4.1:+16064686 | MS.gene34920:intron |
| GATTTGACAACAACTGTATT+AGG | 0.324539 | 4.1:+16063292 | MS.gene34920:CDS |
| TGATGAGTTTGAACTAACTA+TGG | 0.343148 | 4.1:+16066236 | MS.gene34920:CDS |
| ACCGTGGACACTCCAATTCT+TGG | 0.348764 | 4.1:+16064385 | MS.gene34920:CDS |
| TACAAATGATGAAAATTAGA+AGG | 0.351673 | 4.1:+16067059 | MS.gene34920:CDS |
| GATATATAATAGCCTCTTGC+AGG | 0.361118 | 4.1:+16066813 | MS.gene34920:intron |
| ATAACCTGGGAGCAATTCTT+TGG | 0.362177 | 4.1:-16066323 | None:intergenic |
| GAAGCAACAAGTTGATGAAA+TGG | 0.373060 | 4.1:-16067119 | None:intergenic |
| TCTAAAGCCACAATAGTTGC+AGG | 0.374291 | 4.1:-16065111 | None:intergenic |
| GCTATAGAAGCTGGAGCTGC+TGG | 0.383538 | 4.1:+16065045 | MS.gene34920:CDS |
| GCCTCCCTGCGACCAAGAAT+TGG | 0.385667 | 4.1:-16064397 | None:intergenic |
| AACTTTGAAGGGTTGGAACT+TGG | 0.396001 | 4.1:+16064559 | MS.gene34920:CDS |
| GCTAGGGCAGCATCAGCAGC+TGG | 0.397092 | 4.1:+16063677 | MS.gene34920:CDS |
| AGCTGAATCTGCCGGTTTCA+AGG | 0.404696 | 4.1:+16064351 | MS.gene34920:CDS |
| ATAATAGCCTCTTGCAGGTT+GGG | 0.409277 | 4.1:+16066818 | MS.gene34920:intron |
| AAATTGACCGGTCACTCAAC+TGG | 0.412991 | 4.1:+16064732 | MS.gene34920:CDS |
| CCTTATTACAGGATCTGAAA+TGG | 0.414987 | 4.1:+16064847 | MS.gene34920:intron |
| GCACTAGCTCTCGGAGCATC+TGG | 0.418452 | 4.1:+16065749 | MS.gene34920:CDS |
| GTTGAGGAAGTTGCTTCAAC+AGG | 0.428535 | 4.1:+16063842 | MS.gene34920:CDS |
| CTGGCTGCTGATGGTGAAGC+TGG | 0.434576 | 4.1:+16066186 | MS.gene34920:CDS |
| GTTTACGACTACTTTGCATC+AGG | 0.436977 | 4.1:+16063090 | MS.gene34920:CDS |
| CCTATGGTGGGAAAGGTGGT+AGG | 0.448625 | 4.1:+16066875 | MS.gene34920:CDS |
| GAATCCTGGAGAATGCATTT+CGG | 0.451918 | 4.1:-16063143 | None:intergenic |
| AAAGTAGTCGTAAACCATCT+TGG | 0.456025 | 4.1:-16063082 | None:intergenic |
| GTTCAGGCCGCGAATTCTTA+GGG | 0.458882 | 4.1:+16063255 | MS.gene34920:CDS |
| AAGTAGTCGTAAACCATCTT+GGG | 0.463251 | 4.1:-16063081 | None:intergenic |
| GCAAAATTAGCTATAGAAGC+TGG | 0.465706 | 4.1:+16065036 | MS.gene34920:intron |
| GGAACTTGGAAAGCTTGATA+AGG | 0.472483 | 4.1:+16064573 | MS.gene34920:CDS |
| AAGTTGGCGAGCACCGTGAT+TGG | 0.478848 | 4.1:-16065079 | None:intergenic |
| AAGCGCAATTGCCTTGAAAC+CGG | 0.481581 | 4.1:-16064362 | None:intergenic |
| ATGTTTCTGGCGAAATTGAC+CGG | 0.482862 | 4.1:+16064720 | MS.gene34920:CDS |
| AACTTCCTCAACACTGGAAG+TGG | 0.484280 | 4.1:-16063831 | None:intergenic |
| AAGACCTGTGGTGTTCTCAC+TGG | 0.486502 | 4.1:+16066167 | MS.gene34920:CDS |
| CATCAGGGGCAGAAGATCAA+TGG | 0.490128 | 4.1:+16063106 | MS.gene34920:CDS |
| ACAAATGATGAAAATTAGAA+GGG | 0.491304 | 4.1:+16067060 | MS.gene34920:CDS |
| GACAGAATGGTTGCCTATGG+TGG | 0.498247 | 4.1:+16066862 | MS.gene34920:CDS |
| GTGTTCTCACTGGCTGCTGA+TGG | 0.498648 | 4.1:+16066177 | MS.gene34920:CDS |
| ACACTCCAATTCTTGGTCGC+AGG | 0.498986 | 4.1:+16064392 | MS.gene34920:CDS |
| GTAGGGAGATTACAGAATCC+TGG | 0.500080 | 4.1:-16063157 | None:intergenic |
| CTATGTCCCTGCAACTATTG+TGG | 0.500746 | 4.1:+16065104 | MS.gene34920:CDS |
| CTTACATCCCTAAGAATTCG+CGG | 0.501659 | 4.1:-16063262 | None:intergenic |
| TATGGTGGGAAAGGTGGTAG+GGG | 0.503011 | 4.1:+16066877 | MS.gene34920:CDS |
| TTTCTTTGGATTCAATGTGT+TGG | 0.504003 | 4.1:-16067141 | None:intergenic |
| GTAATATCCTCACATAGAGT+TGG | 0.509445 | 4.1:-16063883 | None:intergenic |
| TCCTACAGCCATGCAAAAGA+TGG | 0.512015 | 4.1:+16063345 | MS.gene34920:CDS |
| ACCTGGGAGCAATTCTTTGG+CGG | 0.513846 | 4.1:-16066320 | None:intergenic |
| ATGGTGGGAAAGGTGGTAGG+GGG | 0.520599 | 4.1:+16066878 | MS.gene34920:CDS |
| CTATGGTGGGAAAGGTGGTA+GGG | 0.521264 | 4.1:+16066876 | MS.gene34920:CDS |
| CTGATGGTGAAGCTGGTGTA+AGG | 0.521839 | 4.1:+16066193 | MS.gene34920:CDS |
| TCACCTTCCAGTTGAGTGAC+CGG | 0.533698 | 4.1:-16064739 | None:intergenic |
| GGAATCATCGTTTCCAATCA+CGG | 0.537797 | 4.1:+16065066 | MS.gene34920:CDS |
| GTGAAAAGAGCTGAATCTGC+CGG | 0.538214 | 4.1:+16064343 | MS.gene34920:CDS |
| CACTCCAATTCTTGGTCGCA+GGG | 0.540275 | 4.1:+16064393 | MS.gene34920:CDS |
| TATAATAGCCTCTTGCAGGT+TGG | 0.540390 | 4.1:+16066817 | MS.gene34920:intron |
| GCTGTAGGAGCAATCATGAT+AGG | 0.541426 | 4.1:-16063331 | None:intergenic |
| AAGCAACAAGTTGATGAAAT+GGG | 0.544543 | 4.1:-16067118 | None:intergenic |
| TGTAACAGACACTATCCTCA+TGG | 0.545799 | 4.1:+16063807 | MS.gene34920:intron |
| ATCAGCAGCTGGCACAATCA+TGG | 0.546503 | 4.1:+16063688 | MS.gene34920:CDS |
| ATGCGGTTGCCGTTCACTCA+AGG | 0.547035 | 4.1:+16066263 | MS.gene34920:CDS |
| GCAGACAGAATGGTTGCCTA+TGG | 0.549393 | 4.1:+16066859 | MS.gene34920:CDS |
| TAGGAGAATATGCTACTGCT+AGG | 0.554020 | 4.1:+16063660 | MS.gene34920:intron |
| AGAACCGAAATGCATTCTCC+AGG | 0.555725 | 4.1:+16063139 | MS.gene34920:CDS |
| AACTATTGTGGCTTTAGAAG+AGG | 0.557521 | 4.1:+16065116 | MS.gene34920:CDS |
| TTGCAGGGACATAGTCAAGT+TGG | 0.565500 | 4.1:-16065095 | None:intergenic |
| AATTTCGCCAGAAACATAAG+AGG | 0.565746 | 4.1:-16064714 | None:intergenic |
| ACCGCCAAAGAATTGCTCCC+AGG | 0.567328 | 4.1:+16066319 | MS.gene34920:CDS |
| AAACGAAGCCGCAGACAGAA+TGG | 0.567768 | 4.1:+16066849 | MS.gene34920:CDS |
| CTGGATGGTGGAGTCCGTCG+AGG | 0.576743 | 4.1:+16065710 | MS.gene34920:CDS |
| ACCAAGAATTGGAGTGTCCA+CGG | 0.579879 | 4.1:-16064386 | None:intergenic |
| GAGATATCTCCTTGAGTGAA+CGG | 0.584185 | 4.1:-16066272 | None:intergenic |
| ATGGTTGCCTATGGTGGGAA+AGG | 0.586339 | 4.1:+16066868 | MS.gene34920:CDS |
| ATGGGCCACTTCCAGTGTTG+AGG | 0.589860 | 4.1:+16063826 | MS.gene34920:CDS |
| TGAAGCAACTTCCTCAACAC+TGG | 0.594389 | 4.1:-16063837 | None:intergenic |
| TTTACGACTACTTTGCATCA+GGG | 0.594659 | 4.1:+16063091 | MS.gene34920:CDS |
| TGGATGGTGGAGTCCGTCGA+GGG | 0.595561 | 4.1:+16065711 | MS.gene34920:CDS |
| GGGTTGCTCTTGAACAAAGG+TGG | 0.595576 | 4.1:-16067098 | None:intergenic |
| GGTTGCTCTTGAACAAAGGT+GGG | 0.595593 | 4.1:-16067097 | None:intergenic |
| ACAGAATGGTTGCCTATGGT+GGG | 0.597582 | 4.1:+16066863 | MS.gene34920:CDS |
| GTAACAGACACTATCCTCAT+GGG | 0.597962 | 4.1:+16063808 | MS.gene34920:intron |
| CCTACCACCTTTCCCACCAT+AGG | 0.598579 | 4.1:-16066875 | None:intergenic |
| CAAAAGATGGCTCACCCCGA+AGG | 0.599659 | 4.1:+16063358 | MS.gene34920:CDS |
| GAAGTTGCTTCAACAGGACC+CGG | 0.601516 | 4.1:+16063848 | MS.gene34920:CDS |
| TATCACACCCAACCTGCAAG+AGG | 0.604544 | 4.1:-16066825 | None:intergenic |
| TGAAAACATCTGTCCCTCGA+CGG | 0.615691 | 4.1:-16065724 | None:intergenic |
| GGTCCCACTCTGTGACAACA+TGG | 0.616834 | 4.1:-16066299 | None:intergenic |
| CAAGGCAATTGCGCTTACCG+TGG | 0.619479 | 4.1:+16064369 | MS.gene34920:CDS |
| TTACGACTACTTTGCATCAG+GGG | 0.621680 | 4.1:+16063092 | MS.gene34920:CDS |
| TGACCGGTCACTCAACTGGA+AGG | 0.624873 | 4.1:+16064736 | MS.gene34920:CDS |
| TAGGTTGTGAAAGCAACAGA+AGG | 0.625004 | 4.1:+16065671 | MS.gene34920:intron |
| GTTGCCTATGGTGGGAAAGG+TGG | 0.628864 | 4.1:+16066871 | MS.gene34920:CDS |
| GGTGATTAAAGACAGAAATG+TGG | 0.634813 | 4.1:+16064309 | MS.gene34920:intron |
| AACACTGGAAGTGGCCCATG+AGG | 0.637059 | 4.1:-16063822 | None:intergenic |
| AATGGGTTGCTCTTGAACAA+AGG | 0.637208 | 4.1:-16067101 | None:intergenic |
| AGGAGAATATGCTACTGCTA+GGG | 0.637495 | 4.1:+16063661 | MS.gene34920:intron |
| CTAAAGCCACAATAGTTGCA+GGG | 0.641853 | 4.1:-16065110 | None:intergenic |
| TGCTCTTGAACAAAGGTGGG+AGG | 0.644636 | 4.1:-16067094 | None:intergenic |
| TGACCATGTTGTCACAGAGT+GGG | 0.644898 | 4.1:+16066296 | MS.gene34920:CDS |
| CAAATGATGAAAATTAGAAG+GGG | 0.648339 | 4.1:+16067061 | MS.gene34920:CDS |
| GTGACCATGTTGTCACAGAG+TGG | 0.655992 | 4.1:+16066295 | MS.gene34920:CDS |
| GCAGCCAGTGAGAACACCAC+AGG | 0.660075 | 4.1:-16066171 | None:intergenic |
| TCCAATTCTTGGTCGCAGGG+AGG | 0.688058 | 4.1:+16064396 | MS.gene34920:CDS |
| ATAGGCAACCATTCTGTCTG+CGG | 0.689439 | 4.1:-16066857 | None:intergenic |
| GAACTAACTATGGCACTATG+CGG | 0.703949 | 4.1:+16066246 | MS.gene34920:CDS |
| CGACATTATACATACCTTCG+GGG | 0.719344 | 4.1:-16063372 | None:intergenic |
| TGATCAGATTGGAAGACCTG+TGG | 0.740515 | 4.1:+16066155 | MS.gene34920:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAATTAATAATTAATACTA+TGG | + | chr4.1:16064820-16064839 | MS.gene34920:intron | 10.0% |
| !!! | AAATTAAAATGAAAATTTTG+TGG | - | chr4.1:16065165-16065184 | None:intergenic | 10.0% |
| !!! | AATTTGTTAATAAATTTTAG+AGG | - | chr4.1:16065516-16065535 | None:intergenic | 10.0% |
| !!! | TCTAAAATTTATTAACAAAT+TGG | + | chr4.1:16065515-16065534 | MS.gene34920:intron | 10.0% |
| !!! | TTTTCCTTATTTAATTTTTT+TGG | + | chr4.1:16066745-16066764 | MS.gene34920:intron | 10.0% |
| !! | AAAACAAAAATATTGAAAAC+AGG | - | chr4.1:16063225-16063244 | None:intergenic | 15.0% |
| !! | AAAGATCATAATGTTTAATA+AGG | + | chr4.1:16064133-16064152 | MS.gene34920:intron | 15.0% |
| !! | ACAAATGAAATAAAAAATGA+GGG | - | chr4.1:16063908-16063927 | None:intergenic | 15.0% |
| !! | TACAAATGAAATAAAAAATG+AGG | - | chr4.1:16063909-16063928 | None:intergenic | 15.0% |
| !! | TATGAAATTAAGAAATCATA+TGG | + | chr4.1:16064607-16064626 | MS.gene34920:intron | 15.0% |
| !!! | TTTCTATTTGAAGTAAAAAA+GGG | - | chr4.1:16065246-16065265 | None:intergenic | 15.0% |
| !!! | TTTTACTTTTAACTATTGAA+TGG | + | chr4.1:16065616-16065635 | MS.gene34920:intron | 15.0% |
| !! | AATTCCTATTAATTAACATC+CGG | - | chr4.1:16066404-16066423 | None:intergenic | 20.0% |
| !! | ACAAATGATGAAAATTAGAA+GGG | + | chr4.1:16067060-16067079 | MS.gene34920:CDS | 20.0% |
| !! | ATCAAATAAAAGAAGTTTGT+AGG | - | chr4.1:16063178-16063197 | None:intergenic | 20.0% |
| !! | CAGACCAAAAAAATTAAATA+AGG | - | chr4.1:16066752-16066771 | None:intergenic | 20.0% |
| !! | CATGAGAATAAAATTCTTAA+CGG | - | chr4.1:16064211-16064230 | None:intergenic | 20.0% |
| !! | GAAATGATAAATCTAAATGA+TGG | - | chr4.1:16065892-16065911 | None:intergenic | 20.0% |
| !! | GTACATGATAAAAAAACAAT+CGG | - | chr4.1:16063543-16063562 | None:intergenic | 20.0% |
| !! | TACAAATGATGAAAATTAGA+AGG | + | chr4.1:16067059-16067078 | MS.gene34920:CDS | 20.0% |
| !! | TCAAATAAAAGAAGTTTGTA+GGG | - | chr4.1:16063177-16063196 | None:intergenic | 20.0% |
| !! | TCTAAGAGATTAATAAAGAT+GGG | - | chr4.1:16065564-16065583 | None:intergenic | 20.0% |
| !! | TGTTTGTCAATTTAACAATA+AGG | - | chr4.1:16063964-16063983 | None:intergenic | 20.0% |
| !! | TTGTATTGAAAAACTTTGAA+GGG | + | chr4.1:16064548-16064567 | MS.gene34920:CDS | 20.0% |
| !!! | ATTGCTGTAATTTTGTTATT+TGG | - | chr4.1:16066566-16066585 | None:intergenic | 20.0% |
| !!! | CTATTGAATGGATTTTATTA+AGG | + | chr4.1:16065628-16065647 | MS.gene34920:intron | 20.0% |
| !!! | GTTTCTATTTGAAGTAAAAA+AGG | - | chr4.1:16065247-16065266 | None:intergenic | 20.0% |
| !!! | TAAAAAGTAGAAGTATCTTA+TGG | - | chr4.1:16066498-16066517 | None:intergenic | 20.0% |
| !!! | TATTTTTGTTTTGTGAAAAC+AGG | + | chr4.1:16063233-16063252 | MS.gene34920:intron | 20.0% |
| !!! | TTAAAATGAAAATTTTGTGG+AGG | - | chr4.1:16065162-16065181 | None:intergenic | 20.0% |
| !!! | TTAAGTTTGATTTTCTATGA+TGG | - | chr4.1:16065811-16065830 | None:intergenic | 20.0% |
| ! | AATAACAAGACTATCAGTAA+TGG | - | chr4.1:16064639-16064658 | None:intergenic | 25.0% |
| ! | ATTTATGTTTACTGCAATTG+AGG | + | chr4.1:16063600-16063619 | MS.gene34920:intron | 25.0% |
| ! | ATTTCCATCATATTTGTTCT+CGG | + | chr4.1:16063715-16063734 | MS.gene34920:intron | 25.0% |
| ! | CAAATGATGAAAATTAGAAG+GGG | + | chr4.1:16067061-16067080 | MS.gene34920:CDS | 25.0% |
| ! | CAACAACAACAATATAATAC+AGG | - | chr4.1:16063456-16063475 | None:intergenic | 25.0% |
| ! | CTTGTATTGAAAAACTTTGA+AGG | + | chr4.1:16064547-16064566 | MS.gene34920:CDS | 25.0% |
| ! | TAAAATTCTTAACGGAAGTA+TGG | - | chr4.1:16064203-16064222 | None:intergenic | 25.0% |
| ! | TATATAAACACAAGCAATGT+CGG | - | chr4.1:16066115-16066134 | None:intergenic | 25.0% |
| ! | TTAAACATTATGATCTTTGC+TGG | - | chr4.1:16064131-16064150 | None:intergenic | 25.0% |
| ! | TTATTAATCTCTTAGAGATG+TGG | + | chr4.1:16065568-16065587 | MS.gene34920:intron | 25.0% |
| ! | TTTAAATTGAAACTCTTACC+TGG | + | chr4.1:16065182-16065201 | MS.gene34920:intron | 25.0% |
| !! | AATGACTGTTTTATAGCAAT+TGG | + | chr4.1:16065215-16065234 | MS.gene34920:intron | 25.0% |
| !! | ACAAAGGAATTTAGAGTATT+AGG | + | chr4.1:16066774-16066793 | MS.gene34920:intron | 25.0% |
| !! | CAAATTATGCAATTTTGTGT+AGG | + | chr4.1:16063641-16063660 | MS.gene34920:intron | 25.0% |
| !! | CTATGTAATGTTTTGTAGAA+AGG | - | chr4.1:16064472-16064491 | None:intergenic | 25.0% |
| !! | CTCTAAGAGATTAATAAAGA+TGG | - | chr4.1:16065565-16065584 | None:intergenic | 25.0% |
| !! | GAATTTTCTAAACAATGTAC+AGG | + | chr4.1:16067036-16067055 | MS.gene34920:intron | 25.0% |
| !! | GATCTAAAATATGATCAGAT+TGG | + | chr4.1:16066144-16066163 | MS.gene34920:intron | 25.0% |
| !!! | ATTTTTTTGGTCTGTAACAA+AGG | + | chr4.1:16066758-16066777 | MS.gene34920:intron | 25.0% |
| !!! | CTGATCATATTTTAGATCAA+AGG | - | chr4.1:16066142-16066161 | None:intergenic | 25.0% |
| !!! | CTTCAAAGTTTTTCAATACA+AGG | - | chr4.1:16064549-16064568 | None:intergenic | 25.0% |
| !!! | GTAGTTTTTTTTCTTCTCTT+AGG | + | chr4.1:16064288-16064307 | MS.gene34920:intron | 25.0% |
| !!! | TTAGAGTGTTTGTTTTTAAC+AGG | - | chr4.1:16064936-16064955 | None:intergenic | 25.0% |
| AAAACAATCGGAATTCTGTA+TGG | - | chr4.1:16063531-16063550 | None:intergenic | 30.0% | |
| AAACAATCGGAATTCTGTAT+GGG | - | chr4.1:16063530-16063549 | None:intergenic | 30.0% | |
| AACAAGGCAATGAAAATGAA+TGG | - | chr4.1:16065428-16065447 | None:intergenic | 30.0% | |
| AATAGACTAAGTAGTTGACA+AGG | - | chr4.1:16064268-16064287 | None:intergenic | 30.0% | |
| AATTCCCAACAGATATCAAA+TGG | - | chr4.1:16064969-16064988 | None:intergenic | 30.0% | |
| ACTATGGTAAACCTTATTAC+AGG | + | chr4.1:16064836-16064855 | MS.gene34920:intron | 30.0% | |
| AGACATATGAGTAAGAAACA+AGG | - | chr4.1:16065444-16065463 | None:intergenic | 30.0% | |
| ATATAAACACAAGCAATGTC+GGG | - | chr4.1:16066114-16066133 | None:intergenic | 30.0% | |
| ATGGAGGAGATTATTCTATA+AGG | - | chr4.1:16064184-16064203 | None:intergenic | 30.0% | |
| ATGTCCATTTGATATCTGTT+GGG | + | chr4.1:16064962-16064981 | MS.gene34920:intron | 30.0% | |
| ATGTGCTTTAGTATGGAAAA+AGG | - | chr4.1:16065868-16065887 | None:intergenic | 30.0% | |
| ATTAAGCATAACAAGTGCAT+TGG | - | chr4.1:16063756-16063775 | None:intergenic | 30.0% | |
| CAATATAATACAGGAAGCAA+TGG | - | chr4.1:16063447-16063466 | None:intergenic | 30.0% | |
| CATTTCCAAGTTCAACAAAA+AGG | + | chr4.1:16065906-16065925 | MS.gene34920:intron | 30.0% | |
| CTAAGATGTACTTATGTGTT+CGG | + | chr4.1:16066938-16066957 | MS.gene34920:intron | 30.0% | |
| GATTTGACAACAACTGTATT+AGG | + | chr4.1:16063292-16063311 | MS.gene34920:CDS | 30.0% | |
| GTTTACAAGTATTTCACTAG+AGG | + | chr4.1:16066035-16066054 | MS.gene34920:intron | 30.0% | |
| TATAAAACAGTCATTGTGGT+AGG | - | chr4.1:16065210-16065229 | None:intergenic | 30.0% | |
| TCTATAAGGCTATTTAGTCA+AGG | - | chr4.1:16064170-16064189 | None:intergenic | 30.0% | |
| TGAACCGGATGTTAATTAAT+AGG | + | chr4.1:16066397-16066416 | MS.gene34920:intron | 30.0% | |
| TGATGAGTTTGAACTAACTA+TGG | + | chr4.1:16066236-16066255 | MS.gene34920:CDS | 30.0% | |
| TGGTCTGTGTTTACATTATA+AGG | + | chr4.1:16063412-16063431 | MS.gene34920:intron | 30.0% | |
| TGTGCTTTAGTATGGAAAAA+GGG | - | chr4.1:16065867-16065886 | None:intergenic | 30.0% | |
| TTAAGCATAACAAGTGCATT+GGG | - | chr4.1:16063755-16063774 | None:intergenic | 30.0% | |
| TTGCTATAAAACAGTCATTG+TGG | - | chr4.1:16065214-16065233 | None:intergenic | 30.0% | |
| TTTAGAGGACATTATTCACT+AGG | - | chr4.1:16065501-16065520 | None:intergenic | 30.0% | |
| TTTCTTTGGATTCAATGTGT+TGG | - | chr4.1:16067144-16067163 | None:intergenic | 30.0% | |
| ! | ATTGAAAAACTTTGAAGGGT+TGG | + | chr4.1:16064552-16064571 | MS.gene34920:CDS | 30.0% |
| ! | ATTTGCCTTTTTGTTGAACT+TGG | - | chr4.1:16065914-16065933 | None:intergenic | 30.0% |
| ! | TGTTATGCTTAATTAGCTTC+TGG | + | chr4.1:16063763-16063782 | MS.gene34920:intron | 30.0% |
| !! | AAAATTCCTGTTTTTCTGGA+TGG | + | chr4.1:16065695-16065714 | MS.gene34920:CDS | 30.0% |
| !! | AAGCAACAAGTTGATGAAAT+GGG | - | chr4.1:16067121-16067140 | None:intergenic | 30.0% |
| !! | AGGAAAAATTCCTGTTTTTC+TGG | + | chr4.1:16065691-16065710 | MS.gene34920:CDS | 30.0% |
| !! | TCATTGCCAATTTTAGTGAA+GGG | + | chr4.1:16064885-16064904 | MS.gene34920:CDS | 30.0% |
| !! | TTCATTGCCAATTTTAGTGA+AGG | + | chr4.1:16064884-16064903 | MS.gene34920:CDS | 30.0% |
| !! | TTTTGTTGCTTGTCTTGAAT+AGG | + | chr4.1:16065652-16065671 | MS.gene34920:intron | 30.0% |
| !! | TTTTTCAATACAAGGTGTGA+TGG | - | chr4.1:16064541-16064560 | None:intergenic | 30.0% |
| AAAGCCGAGAACAAATATGA+TGG | - | chr4.1:16063722-16063741 | None:intergenic | 35.0% | |
| AAAGTAGTCGTAAACCATCT+TGG | - | chr4.1:16063085-16063104 | None:intergenic | 35.0% | |
| AAGTAGTCGTAAACCATCTT+GGG | - | chr4.1:16063084-16063103 | None:intergenic | 35.0% | |
| AATTTCGCCAGAAACATAAG+AGG | - | chr4.1:16064717-16064736 | None:intergenic | 35.0% | |
| ACGACATTATACATACCTTC+GGG | - | chr4.1:16063376-16063395 | None:intergenic | 35.0% | |
| ACTAGGATCATAAACTGAAG+AGG | - | chr4.1:16065484-16065503 | None:intergenic | 35.0% | |
| AGTACACCCTTCACTAAAAT+TGG | - | chr4.1:16064894-16064913 | None:intergenic | 35.0% | |
| ATGCAATATTTACACAGGCA+AGG | - | chr4.1:16064794-16064813 | None:intergenic | 35.0% | |
| ATTGCGACAAACACATCAAA+GGG | - | chr4.1:16063937-16063956 | None:intergenic | 35.0% | |
| ATTTCTGTGATGCTTGTAAC+AGG | + | chr4.1:16063984-16064003 | MS.gene34920:intron | 35.0% | |
| CAGTCAAGAAAGAAGAAATG+AGG | - | chr4.1:16065299-16065318 | None:intergenic | 35.0% | |
| CATGTCCATTTGATATCTGT+TGG | + | chr4.1:16064961-16064980 | MS.gene34920:intron | 35.0% | |
| CATTTCTTCTTTCTTGACTG+TGG | + | chr4.1:16065299-16065318 | MS.gene34920:intron | 35.0% | |
| CCATTTCAGATCCTGTAATA+AGG | - | chr4.1:16064850-16064869 | None:intergenic | 35.0% | |
| CCTTATTACAGGATCTGAAA+TGG | + | chr4.1:16064847-16064866 | MS.gene34920:intron | 35.0% | |
| GAAAATTAGAAGGGGAATTC+TGG | + | chr4.1:16067069-16067088 | MS.gene34920:CDS | 35.0% | |
| GACGACATTATACATACCTT+CGG | - | chr4.1:16063377-16063396 | None:intergenic | 35.0% | |
| GATATATAATAGCCTCTTGC+AGG | + | chr4.1:16066813-16066832 | MS.gene34920:intron | 35.0% | |
| GATCAAATTAATCAGAGACG+TGG | + | chr4.1:16066013-16066032 | MS.gene34920:intron | 35.0% | |
| GCAAAATTAGCTATAGAAGC+TGG | + | chr4.1:16065036-16065055 | MS.gene34920:intron | 35.0% | |
| GCCTGTGTAAATATTGCATA+GGG | + | chr4.1:16064795-16064814 | MS.gene34920:intron | 35.0% | |
| GGTGATTAAAGACAGAAATG+TGG | + | chr4.1:16064309-16064328 | MS.gene34920:intron | 35.0% | |
| GTAATATCCTCACATAGAGT+TGG | - | chr4.1:16063886-16063905 | None:intergenic | 35.0% | |
| TATGAGATTGTTCTCCTGAA+TGG | + | chr4.1:16066343-16066362 | MS.gene34920:intron | 35.0% | |
| TCCCTATGCAATATTTACAC+AGG | - | chr4.1:16064799-16064818 | None:intergenic | 35.0% | |
| TCTTCTTCACACTGTAGTTT+AGG | + | chr4.1:16065272-16065291 | MS.gene34920:intron | 35.0% | |
| TCTTTGCTGGTATAAATTGC+AGG | - | chr4.1:16064118-16064137 | None:intergenic | 35.0% | |
| TGATGGAATGTGCTTTAGTA+TGG | - | chr4.1:16065875-16065894 | None:intergenic | 35.0% | |
| TGCCTGTGTAAATATTGCAT+AGG | + | chr4.1:16064794-16064813 | MS.gene34920:intron | 35.0% | |
| TTCTTGTCTCATGCTTCAAT+AGG | + | chr4.1:16066439-16066458 | MS.gene34920:intron | 35.0% | |
| TTTACGACTACTTTGCATCA+GGG | + | chr4.1:16063091-16063110 | MS.gene34920:CDS | 35.0% | |
| ! | AATTCTTAACGGAAGTATGG+AGG | - | chr4.1:16064200-16064219 | None:intergenic | 35.0% |
| ! | ATTAAGTTGTTTATCCGACC+TGG | + | chr4.1:16066076-16066095 | MS.gene34920:intron | 35.0% |
| ! | TGTTTTGTGAAAACAGGTTC+AGG | + | chr4.1:16063239-16063258 | MS.gene34920:intron | 35.0% |
| ! | TTAAGTTGTTTATCCGACCT+GGG | + | chr4.1:16066077-16066096 | MS.gene34920:intron | 35.0% |
| ! | TTAGCATTTTCTTAATCCCC+TGG | - | chr4.1:16065991-16066010 | None:intergenic | 35.0% |
| !! | AACTATTGTGGCTTTAGAAG+AGG | + | chr4.1:16065116-16065135 | MS.gene34920:CDS | 35.0% |
| !! | GAAGCAACAAGTTGATGAAA+TGG | - | chr4.1:16067122-16067141 | None:intergenic | 35.0% |
| !!! | GTTTTTTCCAACTCTATGTG+AGG | + | chr4.1:16063876-16063895 | MS.gene34920:intron | 35.0% |
| !!! | TGTTTTAGTGTCGTTGTACT+AGG | + | chr4.1:16064068-16064087 | MS.gene34920:intron | 35.0% |
| AACTGAAGAGGAAAAGAAGC+AGG | - | chr4.1:16065472-16065491 | None:intergenic | 40.0% | |
| ACTGAAGAGGAAAAGAAGCA+GGG | - | chr4.1:16065471-16065490 | None:intergenic | 40.0% | |
| AGAAGACACACATCATGAAC+CGG | + | chr4.1:16066382-16066401 | MS.gene34920:intron | 40.0% | |
| AGGAGAACAATCTCATAACC+TGG | - | chr4.1:16066340-16066359 | None:intergenic | 40.0% | |
| AGGAGAATATGCTACTGCTA+GGG | + | chr4.1:16063661-16063680 | MS.gene34920:intron | 40.0% | |
| AGTTGGAAAAAACGAATGCC+GGG | - | chr4.1:16063869-16063888 | None:intergenic | 40.0% | |
| ATAACCTGGGAGCAATTCTT+TGG | - | chr4.1:16066326-16066345 | None:intergenic | 40.0% | |
| ATAATAGCCTCTTGCAGGTT+GGG | + | chr4.1:16066818-16066837 | MS.gene34920:intron | 40.0% | |
| ATGATGTGTGTCTTCTTCTC+AGG | - | chr4.1:16066378-16066397 | None:intergenic | 40.0% | |
| CAACTTGGACTAAATACCAG+GGG | + | chr4.1:16065972-16065991 | MS.gene34920:intron | 40.0% | |
| CAAGCAAAAATTGCCCAAGA+TGG | + | chr4.1:16063068-16063087 | MS.gene34920:CDS | 40.0% | |
| CATTGCGACAAACACATCAA+AGG | - | chr4.1:16063938-16063957 | None:intergenic | 40.0% | |
| CCAACTTGGACTAAATACCA+GGG | + | chr4.1:16065971-16065990 | MS.gene34920:intron | 40.0% | |
| CGACATTATACATACCTTCG+GGG | - | chr4.1:16063375-16063394 | None:intergenic | 40.0% | |
| CTAAAGCCACAATAGTTGCA+GGG | - | chr4.1:16065113-16065132 | None:intergenic | 40.0% | |
| CTTACATCCCTAAGAATTCG+CGG | - | chr4.1:16063265-16063284 | None:intergenic | 40.0% | |
| GAACTAACTATGGCACTATG+CGG | + | chr4.1:16066246-16066265 | MS.gene34920:CDS | 40.0% | |
| GAATCCTGGAGAATGCATTT+CGG | - | chr4.1:16063146-16063165 | None:intergenic | 40.0% | |
| GAGATATCTCCTTGAGTGAA+CGG | - | chr4.1:16066275-16066294 | None:intergenic | 40.0% | |
| GAGTTGGAAAAAACGAATGC+CGG | - | chr4.1:16063870-16063889 | None:intergenic | 40.0% | |
| GGAACTTGGAAAGCTTGATA+AGG | + | chr4.1:16064573-16064592 | MS.gene34920:CDS | 40.0% | |
| GGAATCATCGTTTCCAATCA+CGG | + | chr4.1:16065066-16065085 | MS.gene34920:CDS | 40.0% | |
| GGAGAACAATCTCATAACCT+GGG | - | chr4.1:16066339-16066358 | None:intergenic | 40.0% | |
| GGGAGGCTGATATTAAAAAC+AGG | + | chr4.1:16064413-16064432 | MS.gene34920:CDS | 40.0% | |
| GTAACAGACACTATCCTCAT+GGG | + | chr4.1:16063808-16063827 | MS.gene34920:intron | 40.0% | |
| GTTTACGACTACTTTGCATC+AGG | + | chr4.1:16063090-16063109 | MS.gene34920:CDS | 40.0% | |
| TAGGAGAATATGCTACTGCT+AGG | + | chr4.1:16063660-16063679 | MS.gene34920:intron | 40.0% | |
| TAGGTTGTGAAAGCAACAGA+AGG | + | chr4.1:16065671-16065690 | MS.gene34920:intron | 40.0% | |
| TATAATAGCCTCTTGCAGGT+TGG | + | chr4.1:16066817-16066836 | MS.gene34920:intron | 40.0% | |
| TCCTTGCAGACTAATGATTC+TGG | + | chr4.1:16064686-16064705 | MS.gene34920:intron | 40.0% | |
| TGTAACAGACACTATCCTCA+TGG | + | chr4.1:16063807-16063826 | MS.gene34920:intron | 40.0% | |
| TTACGACTACTTTGCATCAG+GGG | + | chr4.1:16063092-16063111 | MS.gene34920:CDS | 40.0% | |
| TTGCGACAAACACATCAAAG+GGG | - | chr4.1:16063936-16063955 | None:intergenic | 40.0% | |
| ! | AACTTTGAAGGGTTGGAACT+TGG | + | chr4.1:16064559-16064578 | MS.gene34920:CDS | 40.0% |
| ! | ACCAGAATCATTAGTCTGCA+AGG | - | chr4.1:16064690-16064709 | None:intergenic | 40.0% |
| ! | CATCTTGGGCAATTTTTGCT+TGG | - | chr4.1:16063070-16063089 | None:intergenic | 40.0% |
| ! | GGCAATTTTTGCTTGGCAAT+TGG | - | chr4.1:16063063-16063082 | None:intergenic | 40.0% |
| ! | TCGTCGATTATTGAACTCGT+TGG | + | chr4.1:16063392-16063411 | MS.gene34920:intron | 40.0% |
| ! | TCTAAAGCCACAATAGTTGC+AGG | - | chr4.1:16065114-16065133 | None:intergenic | 40.0% |
| !! | AATGGGTTGCTCTTGAACAA+AGG | - | chr4.1:16067104-16067123 | None:intergenic | 40.0% |
| !! | ATGTTTCTGGCGAAATTGAC+CGG | + | chr4.1:16064720-16064739 | MS.gene34920:CDS | 40.0% |
| !! | ATTCCTGTTTTTCTGGATGG+TGG | + | chr4.1:16065698-16065717 | MS.gene34920:CDS | 40.0% |
| !! | GTTTTCAAAGCACTAGCTCT+CGG | + | chr4.1:16065740-16065759 | MS.gene34920:CDS | 40.0% |
| AAATTGACCGGTCACTCAAC+TGG | + | chr4.1:16064732-16064751 | MS.gene34920:CDS | 45.0% | |
| AACTTCCTCAACACTGGAAG+TGG | - | chr4.1:16063834-16063853 | None:intergenic | 45.0% | |
| AAGCGCAATTGCCTTGAAAC+CGG | - | chr4.1:16064365-16064384 | None:intergenic | 45.0% | |
| ACAGAATGGTTGCCTATGGT+GGG | + | chr4.1:16066863-16066882 | MS.gene34920:CDS | 45.0% | |
| ACTCCACCATCCAGAAAAAC+AGG | - | chr4.1:16065704-16065723 | None:intergenic | 45.0% | |
| AGAACCGAAATGCATTCTCC+AGG | + | chr4.1:16063139-16063158 | MS.gene34920:CDS | 45.0% | |
| AGATTGTTCTCCTGAATGGC+TGG | + | chr4.1:16066347-16066366 | MS.gene34920:intron | 45.0% | |
| ATAGGCAACCATTCTGTCTG+CGG | - | chr4.1:16066860-16066879 | None:intergenic | 45.0% | |
| ATGTGTGTCTTCTTCTCAGG+TGG | - | chr4.1:16066375-16066394 | None:intergenic | 45.0% | |
| CCCTGGTATTTAGTCCAAGT+TGG | - | chr4.1:16065974-16065993 | None:intergenic | 45.0% | |
| CTATGTCCCTGCAACTATTG+TGG | + | chr4.1:16065104-16065123 | MS.gene34920:CDS | 45.0% | |
| CTGAAGAGGAAAAGAAGCAG+GGG | - | chr4.1:16065470-16065489 | None:intergenic | 45.0% | |
| GCCAACTTGGACTAAATACC+AGG | + | chr4.1:16065970-16065989 | MS.gene34920:intron | 45.0% | |
| GCTGTAGGAGCAATCATGAT+AGG | - | chr4.1:16063334-16063353 | None:intergenic | 45.0% | |
| GGTCTAGCCTCTTATGTTTC+TGG | + | chr4.1:16064707-16064726 | MS.gene34920:CDS | 45.0% | |
| GGTTGCTCTTGAACAAAGGT+GGG | - | chr4.1:16067100-16067119 | None:intergenic | 45.0% | |
| GTAGGGAGATTACAGAATCC+TGG | - | chr4.1:16063160-16063179 | None:intergenic | 45.0% | |
| GTGAAAAGAGCTGAATCTGC+CGG | + | chr4.1:16064343-16064362 | MS.gene34920:CDS | 45.0% | |
| GTTGAGGAAGTTGCTTCAAC+AGG | + | chr4.1:16063842-16063861 | MS.gene34920:CDS | 45.0% | |
| TCCTACAGCCATGCAAAAGA+TGG | + | chr4.1:16063345-16063364 | MS.gene34920:CDS | 45.0% | |
| TGAAAACATCTGTCCCTCGA+CGG | - | chr4.1:16065727-16065746 | None:intergenic | 45.0% | |
| TGAAGCAACTTCCTCAACAC+TGG | - | chr4.1:16063840-16063859 | None:intergenic | 45.0% | |
| TGACCATGTTGTCACAGAGT+GGG | + | chr4.1:16066296-16066315 | MS.gene34920:CDS | 45.0% | |
| TGATCAGATTGGAAGACCTG+TGG | + | chr4.1:16066155-16066174 | MS.gene34920:intron | 45.0% | |
| TTGCAGGGACATAGTCAAGT+TGG | - | chr4.1:16065098-16065117 | None:intergenic | 45.0% | |
| ! | ACCAAGAATTGGAGTGTCCA+CGG | - | chr4.1:16064389-16064408 | None:intergenic | 45.0% |
| ! | TTAGTCCAAGTTGGCTAAGC+TGG | - | chr4.1:16065965-16065984 | None:intergenic | 45.0% |
| AAACGAAGCCGCAGACAGAA+TGG | + | chr4.1:16066849-16066868 | MS.gene34920:CDS | 50.0% | |
| AAGACCTGTGGTGTTCTCAC+TGG | + | chr4.1:16066167-16066186 | MS.gene34920:CDS | 50.0% | |
| ACACTCCAATTCTTGGTCGC+AGG | + | chr4.1:16064392-16064411 | MS.gene34920:CDS | 50.0% | |
| ACCGTGGACACTCCAATTCT+TGG | + | chr4.1:16064385-16064404 | MS.gene34920:CDS | 50.0% | |
| ACCTGGGAGCAATTCTTTGG+CGG | - | chr4.1:16066323-16066342 | None:intergenic | 50.0% | |
| ATCAGCAGCTGGCACAATCA+TGG | + | chr4.1:16063688-16063707 | MS.gene34920:CDS | 50.0% | |
| CACTCAACTGGAAGGTGACT+TGG | + | chr4.1:16064744-16064763 | MS.gene34920:intron | 50.0% | |
| CACTCCAATTCTTGGTCGCA+GGG | + | chr4.1:16064393-16064412 | MS.gene34920:CDS | 50.0% | |
| CAGTCATTGTGGTAGGATCC+AGG | - | chr4.1:16065203-16065222 | None:intergenic | 50.0% | |
| CATCAGGGGCAGAAGATCAA+TGG | + | chr4.1:16063106-16063125 | MS.gene34920:CDS | 50.0% | |
| GAAGACCAGCTTAGCCAACT+TGG | + | chr4.1:16065957-16065976 | MS.gene34920:intron | 50.0% | |
| GAAGTTGCTTCAACAGGACC+CGG | + | chr4.1:16063848-16063867 | MS.gene34920:CDS | 50.0% | |
| GACAGAATGGTTGCCTATGG+TGG | + | chr4.1:16066862-16066881 | MS.gene34920:CDS | 50.0% | |
| GCAGACAGAATGGTTGCCTA+TGG | + | chr4.1:16066859-16066878 | MS.gene34920:CDS | 50.0% | |
| GGGTTGCTCTTGAACAAAGG+TGG | - | chr4.1:16067101-16067120 | None:intergenic | 50.0% | |
| GTGACCATGTTGTCACAGAG+TGG | + | chr4.1:16066295-16066314 | MS.gene34920:CDS | 50.0% | |
| GTTCAGGCCGCGAATTCTTA+GGG | + | chr4.1:16063255-16063274 | MS.gene34920:CDS | 50.0% | |
| TATCACACCCAACCTGCAAG+AGG | - | chr4.1:16066828-16066847 | None:intergenic | 50.0% | |
| TCACCTTCCAGTTGAGTGAC+CGG | - | chr4.1:16064742-16064761 | None:intergenic | 50.0% | |
| TGCTCTTGAACAAAGGTGGG+AGG | - | chr4.1:16067097-16067116 | None:intergenic | 50.0% | |
| ! | ATGGTTGCCTATGGTGGGAA+AGG | + | chr4.1:16066868-16066887 | MS.gene34920:CDS | 50.0% |
| ! | CTATGGTGGGAAAGGTGGTA+GGG | + | chr4.1:16066876-16066895 | MS.gene34920:CDS | 50.0% |
| ! | CTGATGGTGAAGCTGGTGTA+AGG | + | chr4.1:16066193-16066212 | MS.gene34920:CDS | 50.0% |
| ! | GCCATCTTTTGCATGGCTGT+AGG | - | chr4.1:16063349-16063368 | None:intergenic | 50.0% |
| ! | TATGGTGGGAAAGGTGGTAG+GGG | + | chr4.1:16066877-16066896 | MS.gene34920:CDS | 50.0% |
| !! | AGCAATGTCGGGCTAGCTTT+AGG | - | chr4.1:16066103-16066122 | None:intergenic | 50.0% |
| !! | AGCTGAATCTGCCGGTTTCA+AGG | + | chr4.1:16064351-16064370 | MS.gene34920:CDS | 50.0% |
| AACACTGGAAGTGGCCCATG+AGG | - | chr4.1:16063825-16063844 | None:intergenic | 55.0% | |
| ACCGCCAAAGAATTGCTCCC+AGG | + | chr4.1:16066319-16066338 | MS.gene34920:CDS | 55.0% | |
| ATGCGGTTGCCGTTCACTCA+AGG | + | chr4.1:16066263-16066282 | MS.gene34920:CDS | 55.0% | |
| ATGGGCCACTTCCAGTGTTG+AGG | + | chr4.1:16063826-16063845 | MS.gene34920:CDS | 55.0% | |
| CAAAAGATGGCTCACCCCGA+AGG | + | chr4.1:16063358-16063377 | MS.gene34920:CDS | 55.0% | |
| CAAGGCAATTGCGCTTACCG+TGG | + | chr4.1:16064369-16064388 | MS.gene34920:CDS | 55.0% | |
| CCTACCACCTTTCCCACCAT+AGG | - | chr4.1:16066878-16066897 | None:intergenic | 55.0% | |
| GCTATAGAAGCTGGAGCTGC+TGG | + | chr4.1:16065045-16065064 | MS.gene34920:CDS | 55.0% | |
| GGTCCCACTCTGTGACAACA+TGG | - | chr4.1:16066302-16066321 | None:intergenic | 55.0% | |
| GGTTCAGGCCGCGAATTCTT+AGG | + | chr4.1:16063254-16063273 | MS.gene34920:intron | 55.0% | |
| TCCAATTCTTGGTCGCAGGG+AGG | + | chr4.1:16064396-16064415 | MS.gene34920:CDS | 55.0% | |
| TGACCGGTCACTCAACTGGA+AGG | + | chr4.1:16064736-16064755 | MS.gene34920:CDS | 55.0% | |
| ! | AAGTTGGCGAGCACCGTGAT+TGG | - | chr4.1:16065082-16065101 | None:intergenic | 55.0% |
| ! | ATGGTGGGAAAGGTGGTAGG+GGG | + | chr4.1:16066878-16066897 | MS.gene34920:CDS | 55.0% |
| ! | CCTATGGTGGGAAAGGTGGT+AGG | + | chr4.1:16066875-16066894 | MS.gene34920:CDS | 55.0% |
| ! | GGGGTGAGCCATCTTTTGCA+TGG | - | chr4.1:16063356-16063375 | None:intergenic | 55.0% |
| ! | GTGTTCTCACTGGCTGCTGA+TGG | + | chr4.1:16066177-16066196 | MS.gene34920:CDS | 55.0% |
| ! | GTTGCCTATGGTGGGAAAGG+TGG | + | chr4.1:16066871-16066890 | MS.gene34920:CDS | 55.0% |
| GCAGCCAGTGAGAACACCAC+AGG | - | chr4.1:16066174-16066193 | None:intergenic | 60.0% | |
| GCCTCCCTGCGACCAAGAAT+TGG | - | chr4.1:16064400-16064419 | None:intergenic | 60.0% | |
| TCAGGTGGCTCCAGCCATTC+AGG | - | chr4.1:16066360-16066379 | None:intergenic | 60.0% | |
| TGGGAAAGGTGGTAGGGGGA+AGG | + | chr4.1:16066882-16066901 | MS.gene34920:CDS | 60.0% | |
| ! | CTGGCTGCTGATGGTGAAGC+TGG | + | chr4.1:16066186-16066205 | MS.gene34920:CDS | 60.0% |
| ! | GCACTAGCTCTCGGAGCATC+TGG | + | chr4.1:16065749-16065768 | MS.gene34920:CDS | 60.0% |
| !! | GGCTAGCTTTAGGCCCAGGT+CGG | - | chr4.1:16066093-16066112 | None:intergenic | 60.0% |
| !! | TGGATGGTGGAGTCCGTCGA+GGG | + | chr4.1:16065711-16065730 | MS.gene34920:CDS | 60.0% |
| GCTAGGGCAGCATCAGCAGC+TGG | + | chr4.1:16063677-16063696 | MS.gene34920:CDS | 65.0% | |
| !! | CTGGATGGTGGAGTCCGTCG+AGG | + | chr4.1:16065710-16065729 | MS.gene34920:CDS | 65.0% |
| !! | GTCGGGCTAGCTTTAGGCCC+AGG | - | chr4.1:16066097-16066116 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 16063027 | 16067168 | 16063027 | ID=MS.gene34920 |
| chr4.1 | mRNA | 16063027 | 16067168 | 16063027 | ID=MS.gene34920.t1;Parent=MS.gene34920 |
| chr4.1 | exon | 16063027 | 16063166 | 16063027 | ID=MS.gene34920.t1.exon1;Parent=MS.gene34920.t1 |
| chr4.1 | CDS | 16063027 | 16063166 | 16063027 | ID=cds.MS.gene34920.t1;Parent=MS.gene34920.t1 |
| chr4.1 | exon | 16063255 | 16063379 | 16063255 | ID=MS.gene34920.t1.exon2;Parent=MS.gene34920.t1 |
| chr4.1 | CDS | 16063255 | 16063379 | 16063255 | ID=cds.MS.gene34920.t1;Parent=MS.gene34920.t1 |
| chr4.1 | exon | 16063663 | 16063709 | 16063663 | ID=MS.gene34920.t1.exon3;Parent=MS.gene34920.t1 |
| chr4.1 | CDS | 16063663 | 16063709 | 16063663 | ID=cds.MS.gene34920.t1;Parent=MS.gene34920.t1 |
| chr4.1 | exon | 16063815 | 16063892 | 16063815 | ID=MS.gene34920.t1.exon4;Parent=MS.gene34920.t1 |
| chr4.1 | CDS | 16063815 | 16063892 | 16063815 | ID=cds.MS.gene34920.t1;Parent=MS.gene34920.t1 |
| chr4.1 | exon | 16064310 | 16064434 | 16064310 | ID=MS.gene34920.t1.exon5;Parent=MS.gene34920.t1 |
| chr4.1 | CDS | 16064310 | 16064434 | 16064310 | ID=cds.MS.gene34920.t1;Parent=MS.gene34920.t1 |
| chr4.1 | exon | 16064528 | 16064594 | 16064528 | ID=MS.gene34920.t1.exon6;Parent=MS.gene34920.t1 |
| chr4.1 | CDS | 16064528 | 16064594 | 16064528 | ID=cds.MS.gene34920.t1;Parent=MS.gene34920.t1 |
| chr4.1 | exon | 16064695 | 16064757 | 16064695 | ID=MS.gene34920.t1.exon7;Parent=MS.gene34920.t1 |
| chr4.1 | CDS | 16064695 | 16064757 | 16064695 | ID=cds.MS.gene34920.t1;Parent=MS.gene34920.t1 |
| chr4.1 | exon | 16064858 | 16064927 | 16064858 | ID=MS.gene34920.t1.exon8;Parent=MS.gene34920.t1 |
| chr4.1 | CDS | 16064858 | 16064927 | 16064858 | ID=cds.MS.gene34920.t1;Parent=MS.gene34920.t1 |
| chr4.1 | exon | 16065037 | 16065137 | 16065037 | ID=MS.gene34920.t1.exon9;Parent=MS.gene34920.t1 |
| chr4.1 | CDS | 16065037 | 16065137 | 16065037 | ID=cds.MS.gene34920.t1;Parent=MS.gene34920.t1 |
| chr4.1 | exon | 16065674 | 16065778 | 16065674 | ID=MS.gene34920.t1.exon10;Parent=MS.gene34920.t1 |
| chr4.1 | CDS | 16065674 | 16065778 | 16065674 | ID=cds.MS.gene34920.t1;Parent=MS.gene34920.t1 |
| chr4.1 | exon | 16066162 | 16066340 | 16066162 | ID=MS.gene34920.t1.exon11;Parent=MS.gene34920.t1 |
| chr4.1 | CDS | 16066162 | 16066340 | 16066162 | ID=cds.MS.gene34920.t1;Parent=MS.gene34920.t1 |
| chr4.1 | exon | 16066825 | 16066903 | 16066825 | ID=MS.gene34920.t1.exon12;Parent=MS.gene34920.t1 |
| chr4.1 | CDS | 16066825 | 16066903 | 16066825 | ID=cds.MS.gene34920.t1;Parent=MS.gene34920.t1 |
| chr4.1 | exon | 16067058 | 16067168 | 16067058 | ID=MS.gene34920.t1.exon13;Parent=MS.gene34920.t1 |
| chr4.1 | CDS | 16067058 | 16067168 | 16067058 | ID=cds.MS.gene34920.t1;Parent=MS.gene34920.t1 |
| Gene Sequence |
| Protein sequence |
