Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35111.t1 | XP_024638859.1 | 93.7 | 444 | 26 | 1 | 14 | 457 | 139 | 580 | 1.40E-234 | 822 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35111.t1 | Q9SVG3 | 66.0 | 403 | 127 | 4 | 15 | 414 | 139 | 534 | 7.0e-155 | 548.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35111.t1 | A0A396IB37 | 93.3 | 435 | 27 | 1 | 14 | 448 | 139 | 571 | 5.6e-230 | 806.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050815 | MS.gene35111 | 0.800126 | 1.67E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35111.t1 | MTR_4g094515 | 91.629 | 442 | 33 | 2 | 5 | 446 | 132 | 569 | 0.0 | 797 |
| MS.gene35111.t1 | MTR_4g094515 | 71.535 | 404 | 111 | 2 | 14 | 416 | 751 | 1151 | 0.0 | 572 |
| MS.gene35111.t1 | MTR_2g031490 | 70.098 | 408 | 115 | 2 | 14 | 417 | 136 | 540 | 0.0 | 580 |
| MS.gene35111.t1 | MTR_2g031510 | 70.025 | 407 | 115 | 3 | 14 | 416 | 138 | 541 | 0.0 | 566 |
| MS.gene35111.t1 | MTR_2g031590 | 60.859 | 419 | 154 | 5 | 3 | 416 | 120 | 533 | 7.13e-172 | 493 |
| MS.gene35111.t1 | MTR_2g031560 | 58.495 | 412 | 163 | 5 | 4 | 413 | 116 | 521 | 1.92e-170 | 491 |
| MS.gene35111.t1 | MTR_4g094498 | 59.453 | 402 | 156 | 3 | 14 | 414 | 138 | 533 | 3.72e-160 | 464 |
| MS.gene35111.t1 | MTR_4g094418 | 50.490 | 408 | 191 | 5 | 15 | 414 | 30 | 434 | 4.49e-141 | 417 |
| MS.gene35111.t1 | MTR_2g031390 | 51.117 | 403 | 192 | 3 | 17 | 418 | 134 | 532 | 1.58e-140 | 414 |
| MS.gene35111.t1 | MTR_4g094495 | 52.143 | 420 | 189 | 6 | 3 | 415 | 126 | 540 | 3.51e-136 | 403 |
| MS.gene35111.t1 | MTR_4g094488 | 53.676 | 408 | 179 | 5 | 15 | 415 | 133 | 537 | 2.32e-135 | 400 |
| MS.gene35111.t1 | MTR_4g094492 | 51.074 | 419 | 192 | 8 | 3 | 414 | 123 | 535 | 5.39e-134 | 397 |
| MS.gene35111.t1 | MTR_4g094480 | 53.465 | 404 | 180 | 6 | 17 | 415 | 135 | 535 | 5.25e-133 | 394 |
| MS.gene35111.t1 | MTR_4g094478 | 51.852 | 405 | 187 | 5 | 15 | 414 | 133 | 534 | 3.59e-132 | 392 |
| MS.gene35111.t1 | MTR_4g094520 | 51.238 | 404 | 185 | 5 | 17 | 416 | 138 | 533 | 5.99e-130 | 386 |
| MS.gene35111.t1 | MTR_3g009820 | 48.379 | 401 | 198 | 4 | 15 | 413 | 127 | 520 | 6.69e-128 | 381 |
| MS.gene35111.t1 | MTR_2g031420 | 52.000 | 400 | 184 | 5 | 15 | 413 | 133 | 525 | 8.01e-128 | 381 |
| MS.gene35111.t1 | MTR_3g009880 | 49.626 | 401 | 193 | 4 | 15 | 413 | 125 | 518 | 1.11e-127 | 380 |
| MS.gene35111.t1 | MTR_3g009760 | 48.379 | 401 | 198 | 4 | 15 | 413 | 127 | 520 | 1.59e-127 | 380 |
| MS.gene35111.t1 | MTR_4g091150 | 50.980 | 408 | 185 | 6 | 14 | 413 | 138 | 538 | 3.84e-127 | 379 |
| MS.gene35111.t1 | MTR_4g091170 | 47.494 | 419 | 189 | 7 | 4 | 417 | 152 | 544 | 6.83e-126 | 377 |
| MS.gene35111.t1 | MTR_4g091190 | 50.962 | 416 | 189 | 9 | 4 | 414 | 122 | 527 | 3.26e-125 | 374 |
| MS.gene35111.t1 | MTR_4g094518 | 46.731 | 413 | 213 | 4 | 5 | 416 | 125 | 531 | 2.08e-124 | 372 |
| MS.gene35111.t1 | MTR_2g031460 | 49.875 | 399 | 192 | 5 | 15 | 412 | 133 | 524 | 3.27e-123 | 369 |
| MS.gene35111.t1 | MTR_4g088355 | 50.120 | 415 | 196 | 7 | 4 | 414 | 125 | 532 | 6.19e-123 | 369 |
| MS.gene35111.t1 | MTR_4g057990 | 50.361 | 415 | 194 | 6 | 4 | 415 | 117 | 522 | 1.93e-122 | 367 |
| MS.gene35111.t1 | MTR_6g017205 | 51.111 | 405 | 189 | 6 | 14 | 414 | 126 | 525 | 1.51e-120 | 362 |
| MS.gene35111.t1 | MTR_4g091200 | 48.317 | 416 | 204 | 7 | 4 | 415 | 118 | 526 | 5.11e-118 | 355 |
| MS.gene35111.t1 | MTR_2g023590 | 47.549 | 408 | 199 | 7 | 12 | 414 | 68 | 465 | 7.58e-110 | 333 |
| MS.gene35111.t1 | MTR_1g076830 | 38.129 | 417 | 251 | 4 | 15 | 428 | 136 | 548 | 1.75e-88 | 280 |
| MS.gene35111.t1 | MTR_3g009850 | 48.624 | 218 | 110 | 2 | 198 | 413 | 9 | 226 | 1.49e-67 | 216 |
| MS.gene35111.t1 | MTR_2g031600 | 62.658 | 158 | 59 | 0 | 259 | 416 | 244 | 401 | 8.42e-66 | 217 |
| MS.gene35111.t1 | MTR_2g031600 | 74.603 | 126 | 30 | 1 | 3 | 128 | 121 | 244 | 1.43e-49 | 174 |
| MS.gene35111.t1 | MTR_2g084370 | 45.283 | 106 | 36 | 2 | 15 | 120 | 6 | 89 | 4.93e-24 | 96.3 |
| MS.gene35111.t1 | MTR_2g084405 | 50.667 | 75 | 37 | 0 | 14 | 88 | 5 | 79 | 3.90e-16 | 74.3 |
| MS.gene35111.t1 | MTR_7g117710 | 45.882 | 85 | 40 | 3 | 116 | 199 | 30 | 109 | 5.41e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35111.t1 | AT4G20840 | 66.005 | 403 | 127 | 4 | 15 | 414 | 139 | 534 | 0.0 | 523 |
| MS.gene35111.t1 | AT1G11770 | 62.315 | 406 | 143 | 4 | 15 | 417 | 133 | 531 | 5.92e-174 | 499 |
| MS.gene35111.t1 | AT1G01980 | 63.285 | 414 | 137 | 6 | 17 | 422 | 135 | 541 | 1.98e-172 | 495 |
| MS.gene35111.t1 | AT4G20830 | 65.012 | 403 | 131 | 4 | 15 | 414 | 140 | 535 | 5.29e-170 | 489 |
| MS.gene35111.t1 | AT4G20830 | 65.012 | 403 | 131 | 4 | 15 | 414 | 140 | 535 | 1.31e-169 | 489 |
| MS.gene35111.t1 | AT1G30740 | 58.968 | 407 | 155 | 5 | 15 | 416 | 130 | 529 | 1.18e-153 | 447 |
| MS.gene35111.t1 | AT1G30740 | 58.968 | 407 | 155 | 5 | 15 | 416 | 133 | 532 | 1.21e-153 | 447 |
| MS.gene35111.t1 | AT1G30700 | 55.072 | 414 | 176 | 5 | 5 | 416 | 122 | 527 | 1.07e-144 | 424 |
| MS.gene35111.t1 | AT1G34575 | 52.840 | 405 | 178 | 5 | 14 | 415 | 130 | 524 | 2.84e-137 | 405 |
| MS.gene35111.t1 | AT1G30710 | 52.605 | 403 | 179 | 4 | 14 | 413 | 133 | 526 | 3.70e-136 | 402 |
| MS.gene35111.t1 | AT1G26380 | 52.632 | 399 | 180 | 7 | 17 | 413 | 132 | 523 | 5.31e-131 | 389 |
| MS.gene35111.t1 | AT1G30730 | 50.847 | 413 | 193 | 6 | 5 | 415 | 121 | 525 | 8.86e-131 | 388 |
| MS.gene35111.t1 | AT1G30720 | 51.208 | 414 | 192 | 6 | 4 | 415 | 121 | 526 | 2.23e-129 | 385 |
| MS.gene35111.t1 | AT1G30760 | 51.000 | 400 | 187 | 4 | 17 | 415 | 159 | 550 | 3.10e-128 | 383 |
| MS.gene35111.t1 | AT1G30760 | 51.000 | 400 | 187 | 4 | 17 | 415 | 141 | 532 | 3.81e-128 | 382 |
| MS.gene35111.t1 | AT1G26420 | 50.493 | 406 | 184 | 7 | 14 | 413 | 129 | 523 | 2.40e-127 | 380 |
| MS.gene35111.t1 | AT2G34790 | 48.010 | 402 | 200 | 4 | 17 | 417 | 139 | 532 | 9.64e-127 | 378 |
| MS.gene35111.t1 | AT1G26400 | 49.750 | 400 | 193 | 6 | 14 | 412 | 129 | 521 | 1.07e-124 | 373 |
| MS.gene35111.t1 | AT1G26390 | 49.380 | 403 | 195 | 5 | 14 | 413 | 129 | 525 | 1.64e-123 | 370 |
| MS.gene35111.t1 | AT1G26410 | 49.132 | 403 | 192 | 7 | 15 | 413 | 154 | 547 | 1.83e-120 | 363 |
| MS.gene35111.t1 | AT4G20800 | 49.502 | 402 | 189 | 7 | 17 | 413 | 131 | 523 | 2.96e-120 | 361 |
| MS.gene35111.t1 | AT5G44360 | 48.878 | 401 | 193 | 6 | 15 | 413 | 138 | 528 | 1.21e-119 | 360 |
| MS.gene35111.t1 | AT5G44360 | 48.878 | 401 | 193 | 6 | 15 | 413 | 154 | 544 | 1.50e-119 | 360 |
| MS.gene35111.t1 | AT2G34810 | 48.403 | 407 | 199 | 6 | 14 | 413 | 135 | 537 | 2.90e-119 | 359 |
| MS.gene35111.t1 | AT5G44390 | 47.794 | 408 | 196 | 8 | 17 | 416 | 143 | 541 | 1.66e-118 | 357 |
| MS.gene35111.t1 | AT4G20860 | 46.000 | 400 | 209 | 3 | 15 | 413 | 134 | 527 | 1.83e-118 | 357 |
| MS.gene35111.t1 | AT5G44400 | 46.173 | 405 | 199 | 7 | 17 | 413 | 141 | 534 | 3.55e-118 | 356 |
| MS.gene35111.t1 | AT4G20820 | 45.025 | 402 | 204 | 6 | 15 | 413 | 137 | 524 | 3.03e-112 | 341 |
| MS.gene35111.t1 | AT5G44380 | 47.073 | 410 | 194 | 7 | 17 | 416 | 144 | 540 | 1.21e-108 | 332 |
| MS.gene35111.t1 | AT5G44380 | 47.073 | 410 | 194 | 8 | 17 | 416 | 184 | 580 | 2.60e-108 | 332 |
| MS.gene35111.t1 | AT5G44440 | 43.171 | 410 | 208 | 7 | 15 | 413 | 132 | 527 | 2.08e-105 | 323 |
| MS.gene35111.t1 | AT5G44440 | 43.171 | 410 | 208 | 7 | 15 | 413 | 202 | 597 | 1.15e-104 | 323 |
| MS.gene35111.t1 | AT5G44410 | 44.146 | 410 | 200 | 9 | 15 | 413 | 136 | 527 | 5.78e-103 | 317 |
Find 109 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATATTGGTACTAATGATTT+TGG | 0.132509 | 4.4:-19855660 | MS.gene35111:CDS |
| AAAGGCTCTTCTTGGATTAT+TGG | 0.143770 | 4.4:+19855701 | None:intergenic |
| TATGAACAAGGAGTTGTTTA+TGG | 0.147533 | 4.4:-19855627 | MS.gene35111:CDS |
| GTGAAGTTTATTATAGGATA+TGG | 0.184330 | 4.4:-19856640 | MS.gene35111:CDS |
| ACTGTTATGGCTTTGTTTCT+TGG | 0.219607 | 4.4:-19856173 | MS.gene35111:CDS |
| GGTAATATGATGAGAAAATT+TGG | 0.247418 | 4.4:-19856536 | MS.gene35111:CDS |
| GTGAGTTCTAAGGTTGTAAA+AGG | 0.251251 | 4.4:-19856215 | MS.gene35111:CDS |
| GCTGAAATTGTTGATGTTAA+TGG | 0.253859 | 4.4:-19856488 | MS.gene35111:CDS |
| GGAGGTGGAGGAGCGAGTTT+TGG | 0.259984 | 4.4:-19856413 | MS.gene35111:CDS |
| AATTATAGGGACCTTGATAT+TGG | 0.291958 | 4.4:-19855675 | MS.gene35111:CDS |
| GATGAACTTGTTACACTATT+GGG | 0.296098 | 4.4:-19856143 | MS.gene35111:CDS |
| AGATTCAGTATTCGGTGAAT+TGG | 0.298312 | 4.4:-19855803 | MS.gene35111:CDS |
| TATTCAGCCTGTGAGTTCTA+AGG | 0.312395 | 4.4:-19856225 | MS.gene35111:CDS |
| TCTATTCAAGATTCAGTATT+CGG | 0.325898 | 4.4:-19855811 | MS.gene35111:CDS |
| TACTTGGTGAAGTTTATTAT+AGG | 0.327921 | 4.4:-19856646 | MS.gene35111:CDS |
| AGGATGGGTTAGAAGGGATA+TGG | 0.329384 | 4.4:-19855941 | MS.gene35111:CDS |
| TGCGGAGAGTTTGGATAGTT+TGG | 0.331621 | 4.4:-19856327 | MS.gene35111:CDS |
| AAAGTTCATGGCTTTCCTGC+TGG | 0.332436 | 4.4:-19856608 | MS.gene35111:CDS |
| ATGGAAGAAGGTGATTGAAT+TGG | 0.341486 | 4.4:-19855922 | MS.gene35111:CDS |
| CAGCATGTGTAGGAAACTTA+TGG | 0.341826 | 4.4:-19855282 | MS.gene35111:CDS |
| TTGATCCAGAAAATTTCTTC+AGG | 0.346412 | 4.4:-19855551 | MS.gene35111:CDS |
| AATGTCTTTGGCACAAAGTA+TGG | 0.375638 | 4.4:+19856820 | None:intergenic |
| ATATCAAAGGATGGGTTAGA+AGG | 0.386312 | 4.4:-19855948 | MS.gene35111:CDS |
| GTTGGATTGGTTCTGTGCTT+TGG | 0.399417 | 4.4:-19856070 | MS.gene35111:CDS |
| AAGGTCCCTATAATTTAAAA+AGG | 0.400774 | 4.4:+19855683 | None:intergenic |
| AAGTTCATGGCTTTCCTGCT+GGG | 0.404875 | 4.4:-19856607 | MS.gene35111:CDS |
| TGGTAAAGGTGGTAATTGTA+TGG | 0.410046 | 4.4:-19855262 | MS.gene35111:CDS |
| GATTCAGTATTCGGTGAATT+GGG | 0.410302 | 4.4:-19855802 | MS.gene35111:CDS |
| TGGAAGAAGGTGATTGAATT+GGG | 0.414864 | 4.4:-19855921 | MS.gene35111:CDS |
| AAAATTGTTCTGAAATGAGT+TGG | 0.420074 | 4.4:-19856088 | MS.gene35111:CDS |
| GTGATTGAATTGGGAAAAGT+AGG | 0.420297 | 4.4:-19855912 | MS.gene35111:CDS |
| TGAAGTTTATTATAGGATAT+GGG | 0.420618 | 4.4:-19856639 | MS.gene35111:CDS |
| TGATGAACTTGTTACACTAT+TGG | 0.426232 | 4.4:-19856144 | MS.gene35111:CDS |
| TTCCTGTCAAGAAGCTCATC+TGG | 0.428788 | 4.4:+19856023 | None:intergenic |
| TTGCCCCACATACCGATGAT+AGG | 0.429466 | 4.4:-19856265 | MS.gene35111:CDS |
| CTTGGATTATTGGAAACAAA+AGG | 0.430415 | 4.4:+19855711 | None:intergenic |
| GTTTGTCCTACTGTTGGTGT+TGG | 0.433697 | 4.4:-19856584 | MS.gene35111:CDS |
| ACCGCGTTTCCTCACCGTGC+AGG | 0.433754 | 4.4:-19855837 | MS.gene35111:CDS |
| CACTTGAGTGGTGGAGGGTA+TGG | 0.435822 | 4.4:-19856557 | MS.gene35111:CDS |
| GTGCTTTGGTGGGCTAGTAT+TGG | 0.440966 | 4.4:-19856056 | MS.gene35111:CDS |
| AGAGGTACTGGCAGTGGCAC+TGG | 0.444461 | 4.4:+19855328 | None:intergenic |
| TGTCCTACTGTTGGTGTTGG+TGG | 0.450065 | 4.4:-19856581 | MS.gene35111:CDS |
| GTTATGGCTTTGTTTCTTGG+AGG | 0.454128 | 4.4:-19856170 | MS.gene35111:CDS |
| ATTCTTGATAGGAAATCAAT+GGG | 0.454747 | 4.4:-19856461 | MS.gene35111:CDS |
| TTAATGGTAGGATTCTTGAT+AGG | 0.456529 | 4.4:-19856472 | MS.gene35111:CDS |
| GATTGGTTCTGTGCTTTGGT+GGG | 0.458831 | 4.4:-19856066 | MS.gene35111:CDS |
| GGTGGTCACTTGAGTGGTGG+AGG | 0.467181 | 4.4:-19856563 | MS.gene35111:CDS |
| TTTATCATACAGTATTAAGT+TGG | 0.473381 | 4.4:-19856384 | MS.gene35111:CDS |
| TCTTGACAGGAATATTGATT+CGG | 0.475533 | 4.4:-19856012 | MS.gene35111:CDS |
| AACTGTTAGAGTGACTGTTA+TGG | 0.479481 | 4.4:-19856186 | MS.gene35111:CDS |
| TGAATTGGGAAAAGTAGGAT+TGG | 0.485750 | 4.4:-19855907 | MS.gene35111:CDS |
| GAGGTTGCTGTGGTTCAATC+TGG | 0.485796 | 4.4:-19856674 | MS.gene35111:CDS |
| CATAAGTTTCCTACACATGC+TGG | 0.487027 | 4.4:+19855283 | None:intergenic |
| TGGGAGAAGAGTAAAGTTCA+TGG | 0.492553 | 4.4:-19856620 | MS.gene35111:CDS |
| GTTCAATCTGGTGCTATACT+TGG | 0.497152 | 4.4:-19856662 | MS.gene35111:CDS |
| ACTGGCAGTGGCACTGGAGT+TGG | 0.499961 | 4.4:+19855334 | None:intergenic |
| TGAGTTCTAAGGTTGTAAAA+GGG | 0.501382 | 4.4:-19856214 | MS.gene35111:CDS |
| GATTCTTGATAGGAAATCAA+TGG | 0.502476 | 4.4:-19856462 | MS.gene35111:CDS |
| GAAGAGGAAATCTGATTATG+TGG | 0.503029 | 4.4:-19855979 | MS.gene35111:CDS |
| AAAAGCCTATCATCGGTATG+TGG | 0.507246 | 4.4:+19856260 | None:intergenic |
| AACCAGATGAGCTTCTTGAC+AGG | 0.512231 | 4.4:-19856025 | MS.gene35111:CDS |
| GCTGGGGTTTGTCCTACTGT+TGG | 0.514036 | 4.4:-19856590 | MS.gene35111:CDS |
| TGTTCTGAAATGAGTTGGAT+TGG | 0.514378 | 4.4:-19856083 | MS.gene35111:CDS |
| GGATTGGTTCTGTGCTTTGG+TGG | 0.514397 | 4.4:-19856067 | MS.gene35111:CDS |
| AATCATTAGTACCAATATCA+AGG | 0.514587 | 4.4:+19855664 | None:intergenic |
| ATTCGGCAAAATTTCTGAAG+AGG | 0.515257 | 4.4:-19855995 | MS.gene35111:CDS |
| AGTTCATGGCTTTCCTGCTG+GGG | 0.515278 | 4.4:-19856606 | MS.gene35111:CDS |
| CCGCGTTTCCTCACCGTGCA+GGG | 0.515673 | 4.4:-19855836 | MS.gene35111:CDS |
| GAGAATACAATATCAAAGGA+TGG | 0.517021 | 4.4:-19855957 | MS.gene35111:CDS |
| TATTACTTACCAGGGTGAGT+TGG | 0.518312 | 4.4:+19855513 | None:intergenic |
| TTTGTCCGCACTAGAGGTAC+TGG | 0.520705 | 4.4:+19855316 | None:intergenic |
| CACTGTTGATATACAAAATG+AGG | 0.521469 | 4.4:-19856693 | MS.gene35111:CDS |
| GTGTAGGAAACTTATGGTAA+AGG | 0.523538 | 4.4:-19855276 | MS.gene35111:CDS |
| GGAAATAATAGTTATGAACA+AGG | 0.533347 | 4.4:-19855639 | MS.gene35111:CDS |
| GTTAGAAGGGATATGGAAGA+AGG | 0.533370 | 4.4:-19855934 | MS.gene35111:CDS |
| ACAGTAGGACAAACCCCAGC+AGG | 0.538276 | 4.4:+19856593 | None:intergenic |
| TGGGCTATTAGAGGAGGTGG+AGG | 0.539964 | 4.4:-19856425 | MS.gene35111:CDS |
| CGCACTAGAGGTACTGGCAG+TGG | 0.554413 | 4.4:+19855322 | None:intergenic |
| TCTTTCTTCAAACCAAGAGA+AGG | 0.556484 | 4.4:+19856110 | None:intergenic |
| AAGTATGGTAGCTTGAACAT+GGG | 0.559384 | 4.4:+19856835 | None:intergenic |
| TATCAAAGGATGGGTTAGAA+GGG | 0.560336 | 4.4:-19855947 | MS.gene35111:CDS |
| TTTACAACCTTAGAACTCAC+AGG | 0.562752 | 4.4:+19856218 | None:intergenic |
| GTGGTCACTTGAGTGGTGGA+GGG | 0.563379 | 4.4:-19856562 | MS.gene35111:CDS |
| AAAGTATGGTAGCTTGAACA+TGG | 0.566330 | 4.4:+19856834 | None:intergenic |
| TAGGAAACTTATGGTAAAGG+TGG | 0.567722 | 4.4:-19855273 | MS.gene35111:CDS |
| GTTGGTGGTCACTTGAGTGG+TGG | 0.568531 | 4.4:-19856566 | MS.gene35111:CDS |
| AAAGCCTATCATCGGTATGT+GGG | 0.569559 | 4.4:+19856261 | None:intergenic |
| TGTGGAGAATACAATATCAA+AGG | 0.573640 | 4.4:-19855961 | MS.gene35111:CDS |
| TAACAATTTGTCCGCACTAG+AGG | 0.574041 | 4.4:+19855310 | None:intergenic |
| ATGAACTTGTTACACTATTG+GGG | 0.574341 | 4.4:-19856142 | MS.gene35111:CDS |
| TGTTACTTTCCAGCATGTGT+AGG | 0.575985 | 4.4:-19855292 | MS.gene35111:CDS |
| ACTTGTTACACTATTGGGGA+AGG | 0.576337 | 4.4:-19856138 | MS.gene35111:CDS |
| CCCTGCACGGTGAGGAAACG+CGG | 0.583533 | 4.4:+19855836 | None:intergenic |
| GGTGTTGGTGGTCACTTGAG+TGG | 0.589213 | 4.4:-19856569 | MS.gene35111:CDS |
| AGAATACAATATCAAAGGAT+GGG | 0.591063 | 4.4:-19855956 | MS.gene35111:CDS |
| TCGGTGAATTGGGATAAGCC+TGG | 0.595224 | 4.4:-19855792 | MS.gene35111:CDS |
| AAATTGTTGATGTTAATGGT+AGG | 0.611718 | 4.4:-19856484 | MS.gene35111:CDS |
| CCTCATGAAAAGCCTATCAT+CGG | 0.611966 | 4.4:+19856253 | None:intergenic |
| AAGCCTATCATCGGTATGTG+GGG | 0.620231 | 4.4:+19856262 | None:intergenic |
| GAGTTCTAAGGTTGTAAAAG+GGG | 0.622042 | 4.4:-19856213 | MS.gene35111:CDS |
| CAAAGTATTCCAACTCACCC+TGG | 0.636514 | 4.4:-19855522 | MS.gene35111:intron |
| TCTTGAATAGATTCCCTGCA+CGG | 0.644782 | 4.4:+19855823 | None:intergenic |
| TGACCACCAACACCAACAGT+AGG | 0.644936 | 4.4:+19856578 | None:intergenic |
| AATAGATTCCCTGCACGGTG+AGG | 0.655048 | 4.4:+19855828 | None:intergenic |
| CACTGCCAGTACCTCTAGTG+CGG | 0.665600 | 4.4:-19855321 | MS.gene35111:CDS |
| TCACTGAGTTTGTGTTGCAG+TGG | 0.672314 | 4.4:-19856295 | MS.gene35111:CDS |
| TATACAAAATGAGGTTGCTG+TGG | 0.675121 | 4.4:-19856684 | MS.gene35111:CDS |
| TCTTGATAGGAAATCAATGG+GGG | 0.683281 | 4.4:-19856459 | MS.gene35111:CDS |
| TTCTTGATAGGAAATCAATG+GGG | 0.706685 | 4.4:-19856460 | MS.gene35111:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGAAAATAATTTTACAAATC+AGG | - | chr4.4:19856307-19856326 | MS.gene35111:CDS | 15.0% |
| !! | TGAAGTTTATTATAGGATAT+GGG | - | chr4.4:19855428-19855447 | MS.gene35111:intron | 20.0% |
| !! | TTTATCATACAGTATTAAGT+TGG | - | chr4.4:19855683-19855702 | MS.gene35111:CDS | 20.0% |
| !!! | AAGAGCCTTTTTAAATTATA+GGG | - | chr4.4:19856379-19856398 | MS.gene35111:CDS | 20.0% |
| !!! | TTATTTTCTATATCAATTCC+AGG | + | chr4.4:19856296-19856315 | None:intergenic | 20.0% |
| ! | AAACATGTCAAGAATAATGA+AGG | + | chr4.4:19855340-19855359 | None:intergenic | 25.0% |
| ! | AAATTGTTGATGTTAATGGT+AGG | - | chr4.4:19855583-19855602 | MS.gene35111:CDS | 25.0% |
| ! | AACATGTCAAGAATAATGAA+GGG | + | chr4.4:19855339-19855358 | None:intergenic | 25.0% |
| ! | AAGGTCCCTATAATTTAAAA+AGG | + | chr4.4:19856387-19856406 | None:intergenic | 25.0% |
| ! | AATCATTAGTACCAATATCA+AGG | + | chr4.4:19856406-19856425 | None:intergenic | 25.0% |
| ! | AGAATACAATATCAAAGGAT+GGG | - | chr4.4:19856111-19856130 | MS.gene35111:CDS | 25.0% |
| ! | ATTCTTGATAGGAAATCAAT+GGG | - | chr4.4:19855606-19855625 | MS.gene35111:CDS | 25.0% |
| ! | GGAAATAATAGTTATGAACA+AGG | - | chr4.4:19856428-19856447 | MS.gene35111:CDS | 25.0% |
| ! | GGTAATATGATGAGAAAATT+TGG | - | chr4.4:19855531-19855550 | MS.gene35111:CDS | 25.0% |
| ! | GTGAAGTTTATTATAGGATA+TGG | - | chr4.4:19855427-19855446 | MS.gene35111:intron | 25.0% |
| ! | TAATTTAAAAAGGCTCTTCT+TGG | + | chr4.4:19856377-19856396 | None:intergenic | 25.0% |
| ! | TCTATTCAAGATTCAGTATT+CGG | - | chr4.4:19856256-19856275 | MS.gene35111:CDS | 25.0% |
| ! | TTCTATGAAATATATGCTGT+AGG | - | chr4.4:19856671-19856690 | MS.gene35111:CDS | 25.0% |
| ! | TTTGTTTGTTCATGTGTTAT+CGG | - | chr4.4:19856607-19856626 | MS.gene35111:CDS | 25.0% |
| !! | ATTTCAGTAACAATTTTGAG+AGG | - | chr4.4:19856471-19856490 | MS.gene35111:CDS | 25.0% |
| !! | GAAGAGCCTTTTTAAATTAT+AGG | - | chr4.4:19856378-19856397 | MS.gene35111:CDS | 25.0% |
| !! | GATATTGGTACTAATGATTT+TGG | - | chr4.4:19856407-19856426 | MS.gene35111:CDS | 25.0% |
| !! | TACTTGGTGAAGTTTATTAT+AGG | - | chr4.4:19855421-19855440 | MS.gene35111:intron | 25.0% |
| !!! | AAAATTGTTCTGAAATGAGT+TGG | - | chr4.4:19855979-19855998 | MS.gene35111:CDS | 25.0% |
| !!! | GAGTTGAATTTTAATGTCTT+TGG | + | chr4.4:19855262-19855281 | None:intergenic | 25.0% |
| AATTATAGGGACCTTGATAT+TGG | - | chr4.4:19856392-19856411 | MS.gene35111:CDS | 30.0% | |
| ATTCAACTCAAAGTAAGAAG+TGG | - | chr4.4:19855273-19855292 | MS.gene35111:CDS | 30.0% | |
| CACTGTTGATATACAAAATG+AGG | - | chr4.4:19855374-19855393 | MS.gene35111:intron | 30.0% | |
| CGAAAAACAGTAACAATTTC+AGG | + | chr4.4:19855717-19855736 | None:intergenic | 30.0% | |
| CTTGGATTATTGGAAACAAA+AGG | + | chr4.4:19856359-19856378 | None:intergenic | 30.0% | |
| GAGAATACAATATCAAAGGA+TGG | - | chr4.4:19856110-19856129 | MS.gene35111:CDS | 30.0% | |
| GATTCTTGATAGGAAATCAA+TGG | - | chr4.4:19855605-19855624 | MS.gene35111:CDS | 30.0% | |
| GCTGAAATTGTTGATGTTAA+TGG | - | chr4.4:19855579-19855598 | MS.gene35111:CDS | 30.0% | |
| TATGAACAAGGAGTTGTTTA+TGG | - | chr4.4:19856440-19856459 | MS.gene35111:CDS | 30.0% | |
| TCAATTTATCAGTACGAAGT+AGG | + | chr4.4:19856647-19856666 | None:intergenic | 30.0% | |
| TGTGGAGAATACAATATCAA+AGG | - | chr4.4:19856106-19856125 | MS.gene35111:CDS | 30.0% | |
| TTAATGGTAGGATTCTTGAT+AGG | - | chr4.4:19855595-19855614 | MS.gene35111:CDS | 30.0% | |
| TTCTTGACATGTTTCAATTC+AGG | - | chr4.4:19855346-19855365 | MS.gene35111:intron | 30.0% | |
| TTCTTGATAGGAAATCAATG+GGG | - | chr4.4:19855607-19855626 | MS.gene35111:CDS | 30.0% | |
| TTGATCCAGAAAATTTCTTC+AGG | - | chr4.4:19856516-19856535 | MS.gene35111:CDS | 30.0% | |
| ! | TCATTCCTGAAGAAATTTTC+TGG | + | chr4.4:19856524-19856543 | None:intergenic | 30.0% |
| ! | TCTTGACAGGAATATTGATT+CGG | - | chr4.4:19856055-19856074 | MS.gene35111:CDS | 30.0% |
| !! | ATGAACTTGTTACACTATTG+GGG | - | chr4.4:19855925-19855944 | MS.gene35111:CDS | 30.0% |
| !! | GATGAACTTGTTACACTATT+GGG | - | chr4.4:19855924-19855943 | MS.gene35111:CDS | 30.0% |
| !! | TGAGTTCTAAGGTTGTAAAA+GGG | - | chr4.4:19855853-19855872 | MS.gene35111:CDS | 30.0% |
| !! | TGATGAACTTGTTACACTAT+TGG | - | chr4.4:19855923-19855942 | MS.gene35111:CDS | 30.0% |
| AAAGGCTCTTCTTGGATTAT+TGG | + | chr4.4:19856369-19856388 | None:intergenic | 35.0% | |
| AACTGTTAGAGTGACTGTTA+TGG | - | chr4.4:19855881-19855900 | MS.gene35111:CDS | 35.0% | |
| AATGTCTTTGGCACAAAGTA+TGG | + | chr4.4:19855250-19855269 | None:intergenic | 35.0% | |
| AGTACGAAGTAGGAAATAGT+AGG | + | chr4.4:19856637-19856656 | None:intergenic | 35.0% | |
| ATGGAAGAAGGTGATTGAAT+TGG | - | chr4.4:19856145-19856164 | MS.gene35111:CDS | 35.0% | |
| GAAGAGGAAATCTGATTATG+TGG | - | chr4.4:19856088-19856107 | MS.gene35111:CDS | 35.0% | |
| GTGATTGAATTGGGAAAAGT+AGG | - | chr4.4:19856155-19856174 | MS.gene35111:CDS | 35.0% | |
| GTGTAGGAAACTTATGGTAA+AGG | - | chr4.4:19856791-19856810 | MS.gene35111:intron | 35.0% | |
| TAGGAAACTTATGGTAAAGG+TGG | - | chr4.4:19856794-19856813 | MS.gene35111:intron | 35.0% | |
| TATACAAAATGAGGTTGCTG+TGG | - | chr4.4:19855383-19855402 | MS.gene35111:intron | 35.0% | |
| TCTTGATAGGAAATCAATGG+GGG | - | chr4.4:19855608-19855627 | MS.gene35111:CDS | 35.0% | |
| TCTTTCTTCAAACCAAGAGA+AGG | + | chr4.4:19855960-19855979 | None:intergenic | 35.0% | |
| TGAATTGGGAAAAGTAGGAT+TGG | - | chr4.4:19856160-19856179 | MS.gene35111:CDS | 35.0% | |
| TGGAAGAAGGTGATTGAATT+GGG | - | chr4.4:19856146-19856165 | MS.gene35111:CDS | 35.0% | |
| TGGTAAAGGTGGTAATTGTA+TGG | - | chr4.4:19856805-19856824 | MS.gene35111:CDS | 35.0% | |
| TGTCAAGAATAATGAAGGGT+TGG | + | chr4.4:19855335-19855354 | None:intergenic | 35.0% | |
| TTTACAACCTTAGAACTCAC+AGG | + | chr4.4:19855852-19855871 | None:intergenic | 35.0% | |
| TTTGTTCATGTGTTATCGGT+GGG | - | chr4.4:19856611-19856630 | MS.gene35111:CDS | 35.0% | |
| ! | AGATTCAGTATTCGGTGAAT+TGG | - | chr4.4:19856264-19856283 | MS.gene35111:CDS | 35.0% |
| ! | ATTCGGCAAAATTTCTGAAG+AGG | - | chr4.4:19856072-19856091 | MS.gene35111:CDS | 35.0% |
| ! | GATTCAGTATTCGGTGAATT+GGG | - | chr4.4:19856265-19856284 | MS.gene35111:CDS | 35.0% |
| !! | ACTGTTATGGCTTTGTTTCT+TGG | - | chr4.4:19855894-19855913 | MS.gene35111:CDS | 35.0% |
| !! | ATATCAAAGGATGGGTTAGA+AGG | - | chr4.4:19856119-19856138 | MS.gene35111:CDS | 35.0% |
| !! | CAGTAACAATTTTGAGAGGT+TGG | - | chr4.4:19856475-19856494 | MS.gene35111:CDS | 35.0% |
| !! | GAGTTCTAAGGTTGTAAAAG+GGG | - | chr4.4:19855854-19855873 | MS.gene35111:CDS | 35.0% |
| !! | GTGAGTTCTAAGGTTGTAAA+AGG | - | chr4.4:19855852-19855871 | MS.gene35111:CDS | 35.0% |
| !! | TATCAAAGGATGGGTTAGAA+GGG | - | chr4.4:19856120-19856139 | MS.gene35111:CDS | 35.0% |
| !! | TGTTACTGTTTTTCGTGTTG+CGG | - | chr4.4:19855722-19855741 | MS.gene35111:CDS | 35.0% |
| !! | TGTTCTGAAATGAGTTGGAT+TGG | - | chr4.4:19855984-19856003 | MS.gene35111:CDS | 35.0% |
| !!! | AATGGGGGAAGAACTTTTTT+GGG | - | chr4.4:19855623-19855642 | MS.gene35111:CDS | 35.0% |
| !!! | GAACTTTTTTGGGCTATTAG+AGG | - | chr4.4:19855633-19855652 | MS.gene35111:CDS | 35.0% |
| !!! | GGATTGGTTTTCAATCCTTA+CGG | - | chr4.4:19856176-19856195 | MS.gene35111:CDS | 35.0% |
| AAAAGCCTATCATCGGTATG+TGG | + | chr4.4:19855810-19855829 | None:intergenic | 40.0% | |
| AAAGCCTATCATCGGTATGT+GGG | + | chr4.4:19855809-19855828 | None:intergenic | 40.0% | |
| ATGAGATACCCTCAAAGTCA+TGG | + | chr4.4:19855302-19855321 | None:intergenic | 40.0% | |
| CAACTCAAAGTAAGAAGTGG+TGG | - | chr4.4:19855276-19855295 | MS.gene35111:CDS | 40.0% | |
| CAGCATGTGTAGGAAACTTA+TGG | - | chr4.4:19856785-19856804 | MS.gene35111:intron | 40.0% | |
| CATAAGTTTCCTACACATGC+TGG | + | chr4.4:19856787-19856806 | None:intergenic | 40.0% | |
| CCATCCTCTATTACTTACCA+GGG | + | chr4.4:19856565-19856584 | None:intergenic | 40.0% | |
| CCTCATGAAAAGCCTATCAT+CGG | + | chr4.4:19855817-19855836 | None:intergenic | 40.0% | |
| GTTAGAAGGGATATGGAAGA+AGG | - | chr4.4:19856133-19856152 | MS.gene35111:CDS | 40.0% | |
| GTTTGTTCATGTGTTATCGG+TGG | - | chr4.4:19856610-19856629 | MS.gene35111:CDS | 40.0% | |
| TAACAATTTGTCCGCACTAG+AGG | + | chr4.4:19856760-19856779 | None:intergenic | 40.0% | |
| TATTACTTACCAGGGTGAGT+TGG | + | chr4.4:19856557-19856576 | None:intergenic | 40.0% | |
| TATTCAGCCTGTGAGTTCTA+AGG | - | chr4.4:19855842-19855861 | MS.gene35111:CDS | 40.0% | |
| TCCATCCTCTATTACTTACC+AGG | + | chr4.4:19856566-19856585 | None:intergenic | 40.0% | |
| TCTTGAATAGATTCCCTGCA+CGG | + | chr4.4:19856247-19856266 | None:intergenic | 40.0% | |
| TGGGAGAAGAGTAAAGTTCA+TGG | - | chr4.4:19855447-19855466 | MS.gene35111:intron | 40.0% | |
| ! | ACTTGTTACACTATTGGGGA+AGG | - | chr4.4:19855929-19855948 | MS.gene35111:CDS | 40.0% |
| !! | GAGTTCATTTTTCCACCGTA+AGG | + | chr4.4:19856194-19856213 | None:intergenic | 40.0% |
| !! | GTTATGGCTTTGTTTCTTGG+AGG | - | chr4.4:19855897-19855916 | MS.gene35111:CDS | 40.0% |
| !! | GTTCAATCTGGTGCTATACT+TGG | - | chr4.4:19855405-19855424 | MS.gene35111:intron | 40.0% |
| !! | TGTTACTTTCCAGCATGTGT+AGG | - | chr4.4:19856775-19856794 | MS.gene35111:intron | 40.0% |
| !! | TTGGTTTTCAATCCTTACGG+TGG | - | chr4.4:19856179-19856198 | MS.gene35111:CDS | 40.0% |
| !!! | CAATGGGGGAAGAACTTTTT+TGG | - | chr4.4:19855622-19855641 | MS.gene35111:CDS | 40.0% |
| !!! | CTTTTTTGGGCTATTAGAGG+AGG | - | chr4.4:19855636-19855655 | MS.gene35111:CDS | 40.0% |
| AAAGTTCATGGCTTTCCTGC+TGG | - | chr4.4:19855459-19855478 | MS.gene35111:intron | 45.0% | |
| AACCAGATGAGCTTCTTGAC+AGG | - | chr4.4:19856042-19856061 | MS.gene35111:CDS | 45.0% | |
| AAGCCTATCATCGGTATGTG+GGG | + | chr4.4:19855808-19855827 | None:intergenic | 45.0% | |
| AAGTTCATGGCTTTCCTGCT+GGG | - | chr4.4:19855460-19855479 | MS.gene35111:intron | 45.0% | |
| CCCTGGTAAGTAATAGAGGA+TGG | - | chr4.4:19856562-19856581 | MS.gene35111:CDS | 45.0% | |
| CTCACCCTGGTAAGTAATAG+AGG | - | chr4.4:19856558-19856577 | MS.gene35111:CDS | 45.0% | |
| GTCTTTCCTTCAATGCTTGC+AGG | - | chr4.4:19856708-19856727 | MS.gene35111:intron | 45.0% | |
| GTTTGTCCTACTGTTGGTGT+TGG | - | chr4.4:19855483-19855502 | MS.gene35111:intron | 45.0% | |
| TCACTGAGTTTGTGTTGCAG+TGG | - | chr4.4:19855772-19855791 | MS.gene35111:CDS | 45.0% | |
| TGCGGAGAGTTTGGATAGTT+TGG | - | chr4.4:19855740-19855759 | MS.gene35111:CDS | 45.0% | |
| TTCCTGTCAAGAAGCTCATC+TGG | + | chr4.4:19856047-19856066 | None:intergenic | 45.0% | |
| ! | CAAAGTATTCCAACTCACCC+TGG | - | chr4.4:19856545-19856564 | MS.gene35111:CDS | 45.0% |
| ! | CCGATGATAGGCTTTTCATG+AGG | - | chr4.4:19855814-19855833 | MS.gene35111:CDS | 45.0% |
| ! | GGGAAGGATTTTCCTTCTCT+TGG | - | chr4.4:19855945-19855964 | MS.gene35111:CDS | 45.0% |
| ! | TTTTCGTGTTGCGGAGAGTT+TGG | - | chr4.4:19855731-19855750 | MS.gene35111:CDS | 45.0% |
| ! | TTTTGGGCTATTAGAGGAGG+TGG | - | chr4.4:19855639-19855658 | MS.gene35111:CDS | 45.0% |
| !! | AGGATGGGTTAGAAGGGATA+TGG | - | chr4.4:19856126-19856145 | MS.gene35111:CDS | 45.0% |
| !! | GATTGGTTCTGTGCTTTGGT+GGG | - | chr4.4:19856001-19856020 | MS.gene35111:CDS | 45.0% |
| !! | GTTGGATTGGTTCTGTGCTT+TGG | - | chr4.4:19855997-19856016 | MS.gene35111:CDS | 45.0% |
| !! | TTGGAACCTGCAAGCATTGA+AGG | + | chr4.4:19856717-19856736 | None:intergenic | 45.0% |
| AAGTGGTGGCCATGACTTTG+AGG | - | chr4.4:19855290-19855309 | MS.gene35111:CDS | 50.0% | |
| AATAGATTCCCTGCACGGTG+AGG | + | chr4.4:19856242-19856261 | None:intergenic | 50.0% | |
| AGTGGTGGCCATGACTTTGA+GGG | - | chr4.4:19855291-19855310 | MS.gene35111:CDS | 50.0% | |
| AGTTCATGGCTTTCCTGCTG+GGG | - | chr4.4:19855461-19855480 | MS.gene35111:intron | 50.0% | |
| GAGGTTGCTGTGGTTCAATC+TGG | - | chr4.4:19855393-19855412 | MS.gene35111:intron | 50.0% | |
| TCGGTGAATTGGGATAAGCC+TGG | - | chr4.4:19856275-19856294 | MS.gene35111:CDS | 50.0% | |
| TGACCACCAACACCAACAGT+AGG | + | chr4.4:19855492-19855511 | None:intergenic | 50.0% | |
| TTGCCCCACATACCGATGAT+AGG | - | chr4.4:19855802-19855821 | MS.gene35111:CDS | 50.0% | |
| ! | TTTGTCCGCACTAGAGGTAC+TGG | + | chr4.4:19856754-19856773 | None:intergenic | 50.0% |
| !! | GGATTGGTTCTGTGCTTTGG+TGG | - | chr4.4:19856000-19856019 | MS.gene35111:CDS | 50.0% |
| !! | GTGCTTTGGTGGGCTAGTAT+TGG | - | chr4.4:19856011-19856030 | MS.gene35111:CDS | 50.0% |
| !! | TGTCCTACTGTTGGTGTTGG+TGG | - | chr4.4:19855486-19855505 | MS.gene35111:intron | 50.0% |
| ACAGTAGGACAAACCCCAGC+AGG | + | chr4.4:19855477-19855496 | None:intergenic | 55.0% | |
| CACTGCCAGTACCTCTAGTG+CGG | - | chr4.4:19856746-19856765 | MS.gene35111:intron | 55.0% | |
| GCTGGGGTTTGTCCTACTGT+TGG | - | chr4.4:19855477-19855496 | MS.gene35111:intron | 55.0% | |
| TGGGCTATTAGAGGAGGTGG+AGG | - | chr4.4:19855642-19855661 | MS.gene35111:CDS | 55.0% | |
| ! | CACTTGAGTGGTGGAGGGTA+TGG | - | chr4.4:19855510-19855529 | MS.gene35111:intron | 55.0% |
| ! | GTGGTCACTTGAGTGGTGGA+GGG | - | chr4.4:19855505-19855524 | MS.gene35111:intron | 55.0% |
| !! | GGTGTTGGTGGTCACTTGAG+TGG | - | chr4.4:19855498-19855517 | MS.gene35111:intron | 55.0% |
| !! | GTTGGTGGTCACTTGAGTGG+TGG | - | chr4.4:19855501-19855520 | MS.gene35111:intron | 55.0% |
| GGTGGTCACTTGAGTGGTGG+AGG | - | chr4.4:19855504-19855523 | MS.gene35111:intron | 60.0% | |
| ! | ACTGGCAGTGGCACTGGAGT+TGG | + | chr4.4:19856736-19856755 | None:intergenic | 60.0% |
| ! | GGAGGTGGAGGAGCGAGTTT+TGG | - | chr4.4:19855654-19855673 | MS.gene35111:CDS | 60.0% |
| !! | AGAGGTACTGGCAGTGGCAC+TGG | + | chr4.4:19856742-19856761 | None:intergenic | 60.0% |
| !! | CGCACTAGAGGTACTGGCAG+TGG | + | chr4.4:19856748-19856767 | None:intergenic | 60.0% |
| ACCGCGTTTCCTCACCGTGC+AGG | - | chr4.4:19856230-19856249 | MS.gene35111:CDS | 65.0% | |
| CCCTGCACGGTGAGGAAACG+CGG | + | chr4.4:19856234-19856253 | None:intergenic | 65.0% | |
| CCGCGTTTCCTCACCGTGCA+GGG | - | chr4.4:19856231-19856250 | MS.gene35111:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 19855235 | 19856854 | 19855235 | ID=MS.gene35111 |
| chr4.4 | mRNA | 19855235 | 19856854 | 19855235 | ID=MS.gene35111.t1;Parent=MS.gene35111 |
| chr4.4 | exon | 19856805 | 19856854 | 19856805 | ID=MS.gene35111.t1.exon1;Parent=MS.gene35111.t1 |
| chr4.4 | CDS | 19856805 | 19856854 | 19856805 | ID=cds.MS.gene35111.t1;Parent=MS.gene35111.t1 |
| chr4.4 | exon | 19855523 | 19856721 | 19855523 | ID=MS.gene35111.t1.exon2;Parent=MS.gene35111.t1 |
| chr4.4 | CDS | 19855523 | 19856721 | 19855523 | ID=cds.MS.gene35111.t1;Parent=MS.gene35111.t1 |
| chr4.4 | exon | 19855235 | 19855359 | 19855235 | ID=MS.gene35111.t1.exon3;Parent=MS.gene35111.t1 |
| chr4.4 | CDS | 19855235 | 19855359 | 19855235 | ID=cds.MS.gene35111.t1;Parent=MS.gene35111.t1 |
| Gene Sequence |
| Protein sequence |
