Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35154.t1 | XP_013457354.1 | 95.5 | 268 | 10 | 1 | 1 | 266 | 1 | 268 | 1.20E-142 | 515.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35154.t1 | Q0WPS2 | 46.5 | 273 | 132 | 3 | 7 | 265 | 9 | 281 | 2.9e-60 | 233.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35154.t1 | A0A072UZZ0 | 95.5 | 268 | 10 | 1 | 1 | 266 | 1 | 268 | 8.8e-143 | 515.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051719 | MS.gene35154 | 0.803757 | 2.99E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35154.t1 | MTR_4g096780 | 95.522 | 268 | 10 | 1 | 1 | 266 | 1 | 268 | 0.0 | 531 |
| MS.gene35154.t1 | MTR_4g096780 | 94.340 | 265 | 13 | 1 | 1 | 263 | 1 | 265 | 0.0 | 519 |
| MS.gene35154.t1 | MTR_3g046760 | 48.936 | 235 | 105 | 5 | 18 | 251 | 24 | 244 | 5.53e-66 | 206 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35154.t1 | AT4G18260 | 46.377 | 276 | 134 | 3 | 4 | 265 | 6 | 281 | 8.78e-78 | 237 |
| MS.gene35154.t1 | AT2G30890 | 47.368 | 190 | 100 | 0 | 35 | 224 | 33 | 222 | 1.76e-59 | 189 |
| MS.gene35154.t1 | AT4G17280 | 27.461 | 193 | 119 | 5 | 57 | 237 | 218 | 401 | 4.94e-12 | 65.9 |
Find 50 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATCCAGGTTCTGCTTTAT+TGG | 0.158743 | 4.4:-19334813 | None:intergenic |
| CATTACATGGATTGCTTCTA+TGG | 0.160282 | 4.4:+19334741 | MS.gene35154:CDS |
| AGATTAGGTCTAGCACTTTA+TGG | 0.256796 | 4.4:+19335420 | MS.gene35154:CDS |
| GAAAGAAAGAGAGGAGTTAT+TGG | 0.266562 | 4.4:+19336095 | MS.gene35154:CDS |
| GATAATAACCATCAAAGATT+AGG | 0.351198 | 4.4:+19335405 | MS.gene35154:CDS |
| GTGCTAGACCTAATCTTTGA+TGG | 0.351725 | 4.4:-19335413 | None:intergenic |
| GTTGGATTCTTAATGCCTCT+TGG | 0.356042 | 4.4:+19334770 | MS.gene35154:CDS |
| TACTTTGCACACTGGATACT+AGG | 0.365036 | 4.4:+19336118 | MS.gene35154:CDS |
| CTTGGGATACTTACAATTAG+AGG | 0.385390 | 4.4:+19334788 | MS.gene35154:CDS |
| TTGGATTCTTAATGCCTCTT+GGG | 0.391863 | 4.4:+19334771 | MS.gene35154:CDS |
| ATACTTGTGCAAGCTTTCAT+TGG | 0.402865 | 4.4:+19335447 | MS.gene35154:CDS |
| GTTGCCTTTGAGGAATATCT+TGG | 0.404336 | 4.4:-19336351 | None:intergenic |
| TTTATCTTTCCACATGCAAT+TGG | 0.411092 | 4.4:-19336394 | None:intergenic |
| ATTCTGCTCCTTCTTGATCC+AGG | 0.424374 | 4.4:-19334827 | None:intergenic |
| TCAGTGCTTCTTGCCACAGT+TGG | 0.425538 | 4.4:+19335345 | MS.gene35154:CDS |
| TCATATATTCTAATTTGTCT+TGG | 0.440538 | 4.4:-19336279 | None:intergenic |
| TTGCTTCTATGGGGTTCAGT+TGG | 0.452928 | 4.4:+19334752 | MS.gene35154:CDS |
| GGGACAATAGTTTCCCTTGT+GGG | 0.457433 | 4.4:+19336139 | MS.gene35154:CDS |
| CACTCAATGCACAACCTTGG+AGG | 0.479480 | 4.4:+19334406 | MS.gene35154:CDS |
| AGAAAGCAAGGAGTGATTGA+AGG | 0.481400 | 4.4:+19336301 | MS.gene35154:CDS |
| ATTACATGGATTGCTTCTAT+GGG | 0.484467 | 4.4:+19334742 | MS.gene35154:CDS |
| TCAAAGGCAACAAAATCAAA+AGG | 0.490057 | 4.4:+19336363 | MS.gene35154:CDS |
| AAGGTTGTGCATTGAGTGAA+AGG | 0.512285 | 4.4:-19334401 | None:intergenic |
| CTTTGTTATTTGTGTTCCTG+TGG | 0.515228 | 4.4:-19334448 | None:intergenic |
| TTTCACTCAATGCACAACCT+TGG | 0.517454 | 4.4:+19334403 | MS.gene35154:CDS |
| TTTGCAGGGGAAAGAAAGAG+AGG | 0.525844 | 4.4:+19336086 | MS.gene35154:intron |
| TGAATCAGTTTAACAGCCAC+AGG | 0.550927 | 4.4:+19334432 | MS.gene35154:CDS |
| TTGGGATACTTACAATTAGA+GGG | 0.558079 | 4.4:+19334789 | MS.gene35154:CDS |
| TTAGAATATATGAGAAAGCA+AGG | 0.563935 | 4.4:+19336289 | MS.gene35154:CDS |
| CACAAATAACAAAGTTCACA+AGG | 0.567973 | 4.4:+19334457 | MS.gene35154:CDS |
| AAACTGATTCACTTCCTCCA+AGG | 0.573556 | 4.4:-19334420 | None:intergenic |
| GCATCAGATATAGCATTACA+TGG | 0.577510 | 4.4:+19334728 | MS.gene35154:CDS |
| GGGTCCAATAAAGCAGAACC+TGG | 0.582617 | 4.4:+19334809 | MS.gene35154:CDS |
| GTTATTGGTACTTTGCACAC+TGG | 0.583701 | 4.4:+19336110 | MS.gene35154:CDS |
| ACTTTGCACACTGGATACTA+GGG | 0.594151 | 4.4:+19336119 | MS.gene35154:CDS |
| GGACAATAGTTTCCCTTGTG+GGG | 0.599488 | 4.4:+19336140 | MS.gene35154:CDS |
| GGGGATCATCAACATTTACA+CGG | 0.604072 | 4.4:+19336159 | MS.gene35154:CDS |
| TGTGGAAAGATAAATGCACT+TGG | 0.614446 | 4.4:+19336403 | MS.gene35154:CDS |
| AAGCAGAACCTGGATCAAGA+AGG | 0.617858 | 4.4:+19334819 | MS.gene35154:CDS |
| CTTACCAAGATATTCCTCAA+AGG | 0.620966 | 4.4:+19336347 | MS.gene35154:CDS |
| GGGATCATCAACATTTACAC+GGG | 0.632584 | 4.4:+19336160 | MS.gene35154:CDS |
| TTACATGGATTGCTTCTATG+GGG | 0.637280 | 4.4:+19334743 | MS.gene35154:CDS |
| TGACATAGCAGCTCCAACTG+TGG | 0.651797 | 4.4:-19335358 | None:intergenic |
| GAGATGTTGCCAATTGCATG+TGG | 0.663285 | 4.4:+19336385 | MS.gene35154:CDS |
| ACATGACCTGAAAAGCAACA+TGG | 0.664285 | 4.4:-19334862 | None:intergenic |
| AAATGTTGATGATCCCCACA+AGG | 0.667752 | 4.4:-19336153 | None:intergenic |
| AGGGACAATAGTTTCCCTTG+TGG | 0.671953 | 4.4:+19336138 | MS.gene35154:CDS |
| TATTAATGAATTAACCTGTG+AGG | 0.677038 | 4.4:-19335480 | None:intergenic |
| CTAATTGTAAGTATCCCAAG+AGG | 0.677745 | 4.4:-19334785 | None:intergenic |
| AATGTTGATGATCCCCACAA+GGG | 0.682717 | 4.4:-19336152 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATTCATTTTATCAATTT+AGG | + | chr4.4:19334603-19334622 | MS.gene35154:intron | 10.0% |
| !!! | TTTTAAATTGATGAATAAAT+CGG | + | chr4.4:19334575-19334594 | MS.gene35154:intron | 10.0% |
| !! | AGAAATACAGAAAATTAAAA+TGG | - | chr4.4:19335575-19335594 | None:intergenic | 15.0% |
| !!! | TTTTAATCAACAAGAATTAA+TGG | - | chr4.4:19334895-19334914 | None:intergenic | 15.0% |
| !! | AATATTCTAATTGAATTTGC+AGG | + | chr4.4:19336071-19336090 | MS.gene35154:intron | 20.0% |
| !! | ATAGTGTTAAATTATCTTAG+TGG | + | chr4.4:19334962-19334981 | MS.gene35154:intron | 20.0% |
| !! | ATATTAAAACATTACAGTGT+AGG | - | chr4.4:19336035-19336054 | None:intergenic | 20.0% |
| !! | ATATTCTAATTGAATTTGCA+GGG | + | chr4.4:19336072-19336091 | MS.gene35154:intron | 20.0% |
| !! | TGTGATGAATAATAAAAAAC+AGG | - | chr4.4:19335667-19335686 | None:intergenic | 20.0% |
| !!! | ACACTGTAATGTTTTAATAT+AGG | + | chr4.4:19336035-19336054 | MS.gene35154:intron | 20.0% |
| !!! | CACTGTAATGTTTTAATATA+GGG | + | chr4.4:19336036-19336055 | MS.gene35154:intron | 20.0% |
| !!! | TAGTTTCTCATAATTTTCAA+CGG | + | chr4.4:19335728-19335747 | MS.gene35154:intron | 20.0% |
| !!! | TAGTTTTTTTTTAAGCTCTT+TGG | + | chr4.4:19335239-19335258 | MS.gene35154:intron | 20.0% |
| !!! | TCATATATTCTAATTTGTCT+TGG | - | chr4.4:19336282-19336301 | None:intergenic | 20.0% |
| !!! | TCATTTTATTAACCACAAAT+CGG | - | chr4.4:19334630-19334649 | None:intergenic | 20.0% |
| !!! | TTTTTAGCCTAAAAATAACA+AGG | - | chr4.4:19335699-19335718 | None:intergenic | 20.0% |
| ! | ACAAGGTATACAAATTTCTT+TGG | + | chr4.4:19334474-19334493 | MS.gene35154:intron | 25.0% |
| ! | CCTATACATAGATATTTGAA+AGG | + | chr4.4:19335856-19335875 | MS.gene35154:intron | 25.0% |
| ! | CCTTTCAAATATCTATGTAT+AGG | - | chr4.4:19335859-19335878 | None:intergenic | 25.0% |
| ! | GATAATAACCATCAAAGATT+AGG | + | chr4.4:19335405-19335424 | MS.gene35154:CDS | 25.0% |
| ! | TAATCAACAAGAATTAATGG+AGG | - | chr4.4:19334892-19334911 | None:intergenic | 25.0% |
| ! | TATTAATGAATTAACCTGTG+AGG | - | chr4.4:19335483-19335502 | None:intergenic | 25.0% |
| ! | TATTCTAATTGAATTTGCAG+GGG | + | chr4.4:19336073-19336092 | MS.gene35154:intron | 25.0% |
| ! | TTAGAATATATGAGAAAGCA+AGG | + | chr4.4:19336289-19336308 | MS.gene35154:CDS | 25.0% |
| ! | TTTGTTAAAAACTTGACAAG+TGG | + | chr4.4:19334938-19334957 | MS.gene35154:intron | 25.0% |
| !! | AGTTTCTCATAATTTTCAAC+GGG | + | chr4.4:19335729-19335748 | MS.gene35154:intron | 25.0% |
| !! | TTTTTACAATGAGGATAGAA+AGG | - | chr4.4:19335296-19335315 | None:intergenic | 25.0% |
| !!! | ACTTGCTTTAACTTTTATAG+TGG | + | chr4.4:19335062-19335081 | MS.gene35154:intron | 25.0% |
| !!! | AGGGAAAACTTTAGAATATT+TGG | + | chr4.4:19335613-19335632 | MS.gene35154:intron | 25.0% |
| !!! | ATTGTTGCCTTGTTATTTTT+AGG | + | chr4.4:19335689-19335708 | MS.gene35154:intron | 25.0% |
| !!! | GGATTTATTAGCTTTATATG+AGG | - | chr4.4:19335512-19335531 | None:intergenic | 25.0% |
| !!! | GTTAGACTATTTTTACAATG+AGG | - | chr4.4:19335305-19335324 | None:intergenic | 25.0% |
| !!! | GTTTTGGACTATACTTTTTA+CGG | + | chr4.4:19336222-19336241 | MS.gene35154:CDS | 25.0% |
| AACTATGAAGTTTGTGTTGT+TGG | - | chr4.4:19335533-19335552 | None:intergenic | 30.0% | |
| ATGAGGATAGAAAGGTAAAA+AGG | - | chr4.4:19335288-19335307 | None:intergenic | 30.0% | |
| CACAAATAACAAAGTTCACA+AGG | + | chr4.4:19334457-19334476 | MS.gene35154:CDS | 30.0% | |
| CCAGTACGTACTTATAATAA+AGG | - | chr4.4:19334678-19334697 | None:intergenic | 30.0% | |
| CCTTTATTATAAGTACGTAC+TGG | + | chr4.4:19334675-19334694 | MS.gene35154:intron | 30.0% | |
| TCAAAGGCAACAAAATCAAA+AGG | + | chr4.4:19336363-19336382 | MS.gene35154:CDS | 30.0% | |
| TCCTCAAACTTTCATACAAA+GGG | - | chr4.4:19335814-19335833 | None:intergenic | 30.0% | |
| TGATCACTGCTTATAAAAAC+TGG | - | chr4.4:19334653-19334672 | None:intergenic | 30.0% | |
| TTATTATAAGTACGTACTGG+TGG | + | chr4.4:19334678-19334697 | MS.gene35154:intron | 30.0% | |
| TTGGGATACTTACAATTAGA+GGG | + | chr4.4:19334789-19334808 | MS.gene35154:CDS | 30.0% | |
| TTTATCTTTCCACATGCAAT+TGG | - | chr4.4:19336397-19336416 | None:intergenic | 30.0% | |
| ! | ATTACATGGATTGCTTCTAT+GGG | + | chr4.4:19334742-19334761 | MS.gene35154:CDS | 30.0% |
| !! | CCAAAACAATGTGCTTTTTA+AGG | - | chr4.4:19336209-19336228 | None:intergenic | 30.0% |
| !! | CCTTAAAAAGCACATTGTTT+TGG | + | chr4.4:19336206-19336225 | MS.gene35154:CDS | 30.0% |
| !!! | TTTTGATTTTGTTGCCTTTG+AGG | - | chr4.4:19336364-19336383 | None:intergenic | 30.0% |
| AGATTAGGTCTAGCACTTTA+TGG | + | chr4.4:19335420-19335439 | MS.gene35154:CDS | 35.0% | |
| ATACTTGTGCAAGCTTTCAT+TGG | + | chr4.4:19335447-19335466 | MS.gene35154:CDS | 35.0% | |
| CTAATTGTAAGTATCCCAAG+AGG | - | chr4.4:19334788-19334807 | None:intergenic | 35.0% | |
| CTTACCAAGATATTCCTCAA+AGG | + | chr4.4:19336347-19336366 | MS.gene35154:CDS | 35.0% | |
| CTTGGGATACTTACAATTAG+AGG | + | chr4.4:19334788-19334807 | MS.gene35154:CDS | 35.0% | |
| GAAAGAAAGAGAGGAGTTAT+TGG | + | chr4.4:19336095-19336114 | MS.gene35154:CDS | 35.0% | |
| GAACTATAAGTCGTCTACAT+TGG | + | chr4.4:19335207-19335226 | MS.gene35154:intron | 35.0% | |
| GCATCAGATATAGCATTACA+TGG | + | chr4.4:19334728-19334747 | MS.gene35154:CDS | 35.0% | |
| GTCCTCAAACTTTCATACAA+AGG | - | chr4.4:19335815-19335834 | None:intergenic | 35.0% | |
| TCCCTTTGTATGAAAGTTTG+AGG | + | chr4.4:19335810-19335829 | MS.gene35154:intron | 35.0% | |
| TGTGGAAAGATAAATGCACT+TGG | + | chr4.4:19336403-19336422 | MS.gene35154:CDS | 35.0% | |
| TTGGATTCTTAATGCCTCTT+GGG | + | chr4.4:19334771-19334790 | MS.gene35154:CDS | 35.0% | |
| ! | AGCTCCTCATATTTTCATGT+TGG | + | chr4.4:19335776-19335795 | MS.gene35154:intron | 35.0% |
| ! | CATTACATGGATTGCTTCTA+TGG | + | chr4.4:19334741-19334760 | MS.gene35154:CDS | 35.0% |
| ! | CTCCTCATATTTTCATGTTG+GGG | + | chr4.4:19335778-19335797 | MS.gene35154:intron | 35.0% |
| ! | GCTCCTCATATTTTCATGTT+GGG | + | chr4.4:19335777-19335796 | MS.gene35154:intron | 35.0% |
| ! | TTACATGGATTGCTTCTATG+GGG | + | chr4.4:19334743-19334762 | MS.gene35154:CDS | 35.0% |
| !! | ATCAATTTAGGACCGATTTG+TGG | + | chr4.4:19334615-19334634 | MS.gene35154:intron | 35.0% |
| !! | CTTTGTTATTTGTGTTCCTG+TGG | - | chr4.4:19334451-19334470 | None:intergenic | 35.0% |
| !! | TTGGACTATACTTTTTACGG+TGG | + | chr4.4:19336225-19336244 | MS.gene35154:CDS | 35.0% |
| !!! | CTATTTCCATGTTGCTTTTC+AGG | + | chr4.4:19334856-19334875 | MS.gene35154:CDS | 35.0% |
| AAGGTTGTGCATTGAGTGAA+AGG | - | chr4.4:19334404-19334423 | None:intergenic | 40.0% | |
| ACATGACCTGAAAAGCAACA+TGG | - | chr4.4:19334865-19334884 | None:intergenic | 40.0% | |
| ACTTTGCACACTGGATACTA+GGG | + | chr4.4:19336119-19336138 | MS.gene35154:CDS | 40.0% | |
| AGAAAGCAAGGAGTGATTGA+AGG | + | chr4.4:19336301-19336320 | MS.gene35154:CDS | 40.0% | |
| GCTAACTATCTAGCAGCTAT+TGG | + | chr4.4:19334541-19334560 | MS.gene35154:intron | 40.0% | |
| GGGATCATCAACATTTACAC+GGG | + | chr4.4:19336160-19336179 | MS.gene35154:CDS | 40.0% | |
| GGGGATCATCAACATTTACA+CGG | + | chr4.4:19336159-19336178 | MS.gene35154:CDS | 40.0% | |
| GTCCCCAACATGAAAATATG+AGG | - | chr4.4:19335783-19335802 | None:intergenic | 40.0% | |
| GTGCTAGACCTAATCTTTGA+TGG | - | chr4.4:19335416-19335435 | None:intergenic | 40.0% | |
| GTTATTGGTACTTTGCACAC+TGG | + | chr4.4:19336110-19336129 | MS.gene35154:CDS | 40.0% | |
| GTTGGATTCTTAATGCCTCT+TGG | + | chr4.4:19334770-19334789 | MS.gene35154:CDS | 40.0% | |
| TACTTTGCACACTGGATACT+AGG | + | chr4.4:19336118-19336137 | MS.gene35154:CDS | 40.0% | |
| TGAATCAGTTTAACAGCCAC+AGG | + | chr4.4:19334432-19334451 | MS.gene35154:CDS | 40.0% | |
| TGATCCAGGTTCTGCTTTAT+TGG | - | chr4.4:19334816-19334835 | None:intergenic | 40.0% | |
| TGCATGCATGTTAATCAGCA+GGG | + | chr4.4:19335594-19335613 | MS.gene35154:intron | 40.0% | |
| TTTCACTCAATGCACAACCT+TGG | + | chr4.4:19334403-19334422 | MS.gene35154:CDS | 40.0% | |
| ! | AAACTGATTCACTTCCTCCA+AGG | - | chr4.4:19334423-19334442 | None:intergenic | 40.0% |
| ! | GTACTGGTGGTTAATATAGC+AGG | + | chr4.4:19334691-19334710 | MS.gene35154:intron | 40.0% |
| ! | GTTGCCTTTGAGGAATATCT+TGG | - | chr4.4:19336354-19336373 | None:intergenic | 40.0% |
| !! | AAATGTTGATGATCCCCACA+AGG | - | chr4.4:19336156-19336175 | None:intergenic | 40.0% |
| !! | AATGTTGATGATCCCCACAA+GGG | - | chr4.4:19336155-19336174 | None:intergenic | 40.0% |
| !! | ACGGTGGAAGTCTTTTTCAT+TGG | + | chr4.4:19336241-19336260 | MS.gene35154:CDS | 40.0% |
| !! | TTGGATTTTTCAGACCTCAC+AGG | + | chr4.4:19335466-19335485 | MS.gene35154:CDS | 40.0% |
| AAGCAGAACCTGGATCAAGA+AGG | + | chr4.4:19334819-19334838 | MS.gene35154:CDS | 45.0% | |
| AGGGACAATAGTTTCCCTTG+TGG | + | chr4.4:19336138-19336157 | MS.gene35154:CDS | 45.0% | |
| ATTCTGCTCCTTCTTGATCC+AGG | - | chr4.4:19334830-19334849 | None:intergenic | 45.0% | |
| CTGCATGCATGTTAATCAGC+AGG | + | chr4.4:19335593-19335612 | MS.gene35154:intron | 45.0% | |
| GAGATGTTGCCAATTGCATG+TGG | + | chr4.4:19336385-19336404 | MS.gene35154:CDS | 45.0% | |
| GGACAATAGTTTCCCTTGTG+GGG | + | chr4.4:19336140-19336159 | MS.gene35154:CDS | 45.0% | |
| GGGACAATAGTTTCCCTTGT+GGG | + | chr4.4:19336139-19336158 | MS.gene35154:CDS | 45.0% | |
| TTGCTTCTATGGGGTTCAGT+TGG | + | chr4.4:19334752-19334771 | MS.gene35154:CDS | 45.0% | |
| TTTGCAGGGGAAAGAAAGAG+AGG | + | chr4.4:19336086-19336105 | MS.gene35154:intron | 45.0% | |
| !! | AAAAATAAAAAAAAAAACAT+TGG | - | chr4.4:19335093-19335112 | None:intergenic | 5.0% |
| CACTCAATGCACAACCTTGG+AGG | + | chr4.4:19334406-19334425 | MS.gene35154:CDS | 50.0% | |
| GGGTCCAATAAAGCAGAACC+TGG | + | chr4.4:19334809-19334828 | MS.gene35154:CDS | 50.0% | |
| TCAGTGCTTCTTGCCACAGT+TGG | + | chr4.4:19335345-19335364 | MS.gene35154:CDS | 50.0% | |
| TGACATAGCAGCTCCAACTG+TGG | - | chr4.4:19335361-19335380 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 19334341 | 19336441 | 19334341 | ID=MS.gene35154 |
| chr4.4 | mRNA | 19334341 | 19336441 | 19334341 | ID=MS.gene35154.t1;Parent=MS.gene35154 |
| chr4.4 | exon | 19334341 | 19334478 | 19334341 | ID=MS.gene35154.t1.exon1;Parent=MS.gene35154.t1 |
| chr4.4 | CDS | 19334341 | 19334478 | 19334341 | ID=cds.MS.gene35154.t1;Parent=MS.gene35154.t1 |
| chr4.4 | exon | 19334713 | 19334877 | 19334713 | ID=MS.gene35154.t1.exon2;Parent=MS.gene35154.t1 |
| chr4.4 | CDS | 19334713 | 19334877 | 19334713 | ID=cds.MS.gene35154.t1;Parent=MS.gene35154.t1 |
| chr4.4 | exon | 19335339 | 19335487 | 19335339 | ID=MS.gene35154.t1.exon3;Parent=MS.gene35154.t1 |
| chr4.4 | CDS | 19335339 | 19335487 | 19335339 | ID=cds.MS.gene35154.t1;Parent=MS.gene35154.t1 |
| chr4.4 | exon | 19336093 | 19336441 | 19336093 | ID=MS.gene35154.t1.exon4;Parent=MS.gene35154.t1 |
| chr4.4 | CDS | 19336093 | 19336441 | 19336093 | ID=cds.MS.gene35154.t1;Parent=MS.gene35154.t1 |
| Gene Sequence |
| Protein sequence |
