Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35419.t1 | XP_003596825.2 | 98.7 | 388 | 5 | 0 | 1 | 388 | 1 | 388 | 6.00E-215 | 756.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35419.t1 | Q9ZQG9 | 61.6 | 383 | 134 | 5 | 5 | 383 | 7 | 380 | 2.1e-131 | 470.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35419.t1 | G7ITT7 | 98.7 | 388 | 5 | 0 | 1 | 388 | 1 | 388 | 4.3e-215 | 756.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene35419 | MS.gene014280 | PPI |
MS.gene35419 | MS.gene50078 | PPI |
MS.gene35419 | MS.gene056701 | PPI |
MS.gene35419 | MS.gene68221 | PPI |
MS.gene35419 | MS.gene064895 | PPI |
MS.gene35419 | MS.gene45685 | PPI |
MS.gene35419 | MS.gene063164 | PPI |
MS.gene35419 | MS.gene003763 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35419.t1 | MTR_2g086530 | 98.711 | 388 | 5 | 0 | 1 | 388 | 1 | 388 | 0.0 | 773 |
MS.gene35419.t1 | MTR_2g086530 | 99.183 | 367 | 3 | 0 | 22 | 388 | 1 | 367 | 0.0 | 736 |
MS.gene35419.t1 | MTR_4g052970 | 66.935 | 372 | 115 | 2 | 16 | 385 | 16 | 381 | 0.0 | 514 |
MS.gene35419.t1 | MTR_1g077990 | 61.950 | 318 | 118 | 2 | 30 | 345 | 32 | 348 | 7.32e-144 | 414 |
MS.gene35419.t1 | MTR_4g084480 | 50.000 | 338 | 167 | 1 | 10 | 345 | 13 | 350 | 2.82e-124 | 364 |
MS.gene35419.t1 | MTR_4g084480 | 50.000 | 338 | 167 | 1 | 10 | 345 | 6 | 343 | 3.35e-124 | 364 |
MS.gene35419.t1 | MTR_4g084480 | 50.000 | 338 | 167 | 1 | 10 | 345 | 13 | 350 | 3.79e-124 | 364 |
MS.gene35419.t1 | MTR_2g019345 | 48.980 | 343 | 170 | 3 | 5 | 345 | 2 | 341 | 3.34e-117 | 346 |
MS.gene35419.t1 | MTR_4g010200 | 45.070 | 355 | 185 | 4 | 4 | 351 | 7 | 358 | 4.91e-115 | 340 |
MS.gene35419.t1 | MTR_4g114850 | 44.932 | 365 | 187 | 4 | 29 | 383 | 26 | 386 | 4.58e-110 | 328 |
MS.gene35419.t1 | MTR_4g114850 | 48.758 | 322 | 158 | 2 | 29 | 345 | 26 | 345 | 3.55e-109 | 325 |
MS.gene35419.t1 | MTR_4g114850 | 48.758 | 322 | 158 | 2 | 29 | 345 | 26 | 345 | 4.12e-109 | 325 |
MS.gene35419.t1 | MTR_4g069940 | 42.655 | 354 | 199 | 3 | 2 | 352 | 3 | 355 | 1.04e-94 | 291 |
MS.gene35419.t1 | MTR_1g022160 | 43.210 | 324 | 180 | 3 | 29 | 348 | 24 | 347 | 2.85e-94 | 288 |
MS.gene35419.t1 | MTR_3g080410 | 43.732 | 343 | 181 | 5 | 22 | 353 | 19 | 360 | 8.44e-94 | 285 |
MS.gene35419.t1 | MTR_1g022160 | 43.210 | 324 | 180 | 3 | 29 | 348 | 24 | 347 | 1.62e-93 | 289 |
MS.gene35419.t1 | MTR_1g022160 | 43.210 | 324 | 180 | 3 | 29 | 348 | 24 | 347 | 3.40e-93 | 288 |
MS.gene35419.t1 | MTR_5g085580 | 45.092 | 326 | 174 | 3 | 24 | 345 | 20 | 344 | 3.64e-93 | 287 |
MS.gene35419.t1 | MTR_1g022160 | 43.210 | 324 | 180 | 3 | 29 | 348 | 24 | 347 | 4.32e-93 | 287 |
MS.gene35419.t1 | MTR_3g116510 | 42.407 | 349 | 193 | 4 | 6 | 351 | 10 | 353 | 3.68e-92 | 284 |
MS.gene35419.t1 | MTR_1g056640 | 44.237 | 321 | 174 | 4 | 29 | 345 | 38 | 357 | 2.21e-91 | 283 |
MS.gene35419.t1 | MTR_6g088885 | 41.547 | 349 | 197 | 3 | 5 | 350 | 6 | 350 | 5.04e-89 | 278 |
MS.gene35419.t1 | MTR_1g007810 | 42.433 | 337 | 182 | 6 | 10 | 342 | 1 | 329 | 6.89e-87 | 268 |
MS.gene35419.t1 | MTR_7g053500 | 40.719 | 334 | 180 | 7 | 30 | 351 | 27 | 354 | 7.56e-85 | 266 |
MS.gene35419.t1 | MTR_7g026340 | 40.625 | 320 | 180 | 7 | 30 | 345 | 24 | 337 | 6.54e-80 | 253 |
MS.gene35419.t1 | MTR_4g083500 | 41.617 | 334 | 188 | 6 | 28 | 357 | 43 | 373 | 1.05e-77 | 249 |
MS.gene35419.t1 | MTR_8g102340 | 40.752 | 319 | 157 | 4 | 30 | 348 | 29 | 315 | 4.71e-77 | 246 |
MS.gene35419.t1 | MTR_8g012400 | 36.975 | 357 | 214 | 7 | 10 | 356 | 7 | 362 | 5.44e-77 | 245 |
MS.gene35419.t1 | MTR_4g088155 | 36.944 | 360 | 204 | 7 | 11 | 356 | 8 | 358 | 3.27e-76 | 243 |
MS.gene35419.t1 | MTR_4g076490 | 36.288 | 361 | 200 | 6 | 2 | 344 | 54 | 402 | 1.60e-75 | 240 |
MS.gene35419.t1 | MTR_8g085720 | 35.467 | 375 | 229 | 5 | 1 | 366 | 1 | 371 | 2.24e-74 | 239 |
MS.gene35419.t1 | MTR_4g132280 | 38.154 | 325 | 194 | 3 | 23 | 341 | 39 | 362 | 5.13e-71 | 231 |
MS.gene35419.t1 | MTR_3g083580 | 36.308 | 325 | 199 | 4 | 26 | 343 | 23 | 346 | 5.28e-70 | 228 |
MS.gene35419.t1 | MTR_4g076470 | 37.278 | 338 | 188 | 8 | 12 | 341 | 3 | 324 | 2.81e-69 | 221 |
MS.gene35419.t1 | MTR_4g076430 | 36.095 | 338 | 198 | 8 | 10 | 343 | 3 | 326 | 1.08e-67 | 217 |
MS.gene35419.t1 | MTR_1g052430 | 38.679 | 318 | 181 | 8 | 23 | 336 | 28 | 335 | 1.30e-67 | 219 |
MS.gene35419.t1 | MTR_7g053500 | 37.993 | 279 | 163 | 5 | 77 | 351 | 5 | 277 | 1.45e-66 | 216 |
MS.gene35419.t1 | MTR_4g076440 | 34.718 | 337 | 204 | 7 | 10 | 343 | 3 | 326 | 4.73e-66 | 213 |
MS.gene35419.t1 | MTR_4g076570 | 37.304 | 319 | 190 | 6 | 29 | 344 | 22 | 333 | 9.22e-66 | 213 |
MS.gene35419.t1 | MTR_4g076255 | 36.709 | 316 | 185 | 6 | 30 | 343 | 26 | 328 | 3.34e-65 | 211 |
MS.gene35419.t1 | MTR_2g034480 | 36.443 | 343 | 196 | 10 | 30 | 366 | 28 | 354 | 5.72e-65 | 211 |
MS.gene35419.t1 | MTR_3g065460 | 36.628 | 344 | 209 | 5 | 8 | 345 | 5 | 345 | 7.88e-65 | 214 |
MS.gene35419.t1 | MTR_1g031900 | 35.380 | 342 | 214 | 4 | 10 | 345 | 5 | 345 | 3.39e-64 | 213 |
MS.gene35419.t1 | MTR_1g031900 | 35.380 | 342 | 214 | 4 | 10 | 345 | 5 | 345 | 6.00e-64 | 212 |
MS.gene35419.t1 | MTR_3g116510 | 45.205 | 219 | 120 | 0 | 133 | 351 | 1 | 219 | 1.18e-62 | 204 |
MS.gene35419.t1 | MTR_4g076500 | 36.538 | 312 | 186 | 6 | 30 | 338 | 79 | 381 | 3.37e-62 | 205 |
MS.gene35419.t1 | MTR_8g012400 | 38.202 | 267 | 160 | 4 | 94 | 356 | 17 | 282 | 5.45e-61 | 201 |
MS.gene35419.t1 | MTR_5g078200 | 35.000 | 340 | 214 | 3 | 12 | 345 | 6 | 344 | 5.77e-61 | 207 |
MS.gene35419.t1 | MTR_7g081350 | 33.333 | 342 | 212 | 9 | 8 | 343 | 4 | 335 | 1.86e-60 | 199 |
MS.gene35419.t1 | MTR_2g034470 | 35.168 | 327 | 194 | 10 | 30 | 349 | 31 | 346 | 3.31e-60 | 199 |
MS.gene35419.t1 | MTR_5g078200 | 36.218 | 312 | 192 | 3 | 40 | 345 | 1 | 311 | 1.27e-58 | 201 |
MS.gene35419.t1 | MTR_2g034440 | 35.144 | 313 | 187 | 9 | 30 | 336 | 23 | 325 | 1.62e-58 | 194 |
MS.gene35419.t1 | MTR_2g034470 | 34.891 | 321 | 191 | 10 | 36 | 349 | 2 | 311 | 1.39e-57 | 191 |
MS.gene35419.t1 | MTR_7g081370 | 31.778 | 343 | 204 | 10 | 8 | 343 | 4 | 323 | 3.46e-53 | 179 |
MS.gene35419.t1 | MTR_5g081720 | 34.304 | 309 | 180 | 11 | 45 | 342 | 53 | 349 | 4.06e-47 | 165 |
MS.gene35419.t1 | MTR_4g124440 | 32.303 | 356 | 210 | 16 | 7 | 345 | 6 | 347 | 1.59e-45 | 163 |
MS.gene35419.t1 | MTR_6g032820 | 29.781 | 366 | 225 | 13 | 4 | 351 | 3 | 354 | 7.30e-45 | 160 |
MS.gene35419.t1 | MTR_8g092070 | 30.793 | 328 | 198 | 14 | 30 | 341 | 35 | 349 | 7.38e-45 | 163 |
MS.gene35419.t1 | MTR_7g085390 | 32.733 | 333 | 202 | 14 | 30 | 349 | 27 | 350 | 8.88e-45 | 161 |
MS.gene35419.t1 | MTR_4g112025 | 31.285 | 358 | 221 | 12 | 4 | 346 | 6 | 353 | 9.55e-45 | 162 |
MS.gene35419.t1 | MTR_1g010120 | 31.844 | 358 | 212 | 16 | 7 | 349 | 9 | 349 | 2.03e-44 | 160 |
MS.gene35419.t1 | MTR_2g027560 | 31.343 | 335 | 205 | 13 | 30 | 348 | 29 | 354 | 6.59e-43 | 156 |
MS.gene35419.t1 | MTR_3g095050 | 31.498 | 327 | 197 | 12 | 29 | 341 | 34 | 347 | 1.81e-39 | 147 |
MS.gene35419.t1 | MTR_1g053320 | 29.213 | 356 | 228 | 12 | 11 | 353 | 16 | 360 | 2.14e-39 | 147 |
MS.gene35419.t1 | MTR_3g108600 | 30.448 | 335 | 193 | 13 | 30 | 352 | 32 | 338 | 8.55e-39 | 145 |
MS.gene35419.t1 | MTR_3g031770 | 29.042 | 334 | 202 | 13 | 30 | 345 | 28 | 344 | 2.30e-30 | 122 |
MS.gene35419.t1 | MTR_4g134280 | 32.117 | 274 | 162 | 12 | 114 | 372 | 3 | 267 | 6.97e-30 | 119 |
MS.gene35419.t1 | MTR_4g036680 | 42.727 | 110 | 50 | 5 | 243 | 351 | 80 | 177 | 1.79e-18 | 84.0 |
MS.gene35419.t1 | MTR_4g036775 | 42.727 | 110 | 50 | 5 | 243 | 351 | 80 | 177 | 1.79e-18 | 84.0 |
MS.gene35419.t1 | MTR_6g078180 | 50.000 | 50 | 25 | 0 | 90 | 139 | 5 | 54 | 4.91e-11 | 58.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35419.t1 | AT2G27500 | 63.277 | 354 | 121 | 3 | 26 | 376 | 26 | 373 | 1.01e-164 | 466 |
MS.gene35419.t1 | AT2G27500 | 62.327 | 361 | 127 | 3 | 26 | 383 | 26 | 380 | 1.05e-164 | 467 |
MS.gene35419.t1 | AT1G32860 | 53.868 | 349 | 157 | 2 | 1 | 345 | 1 | 349 | 1.20e-134 | 392 |
MS.gene35419.t1 | AT2G27500 | 60.390 | 308 | 113 | 3 | 79 | 383 | 1 | 302 | 2.38e-134 | 387 |
MS.gene35419.t1 | AT5G42100 | 54.969 | 322 | 140 | 3 | 30 | 346 | 28 | 349 | 6.40e-125 | 367 |
MS.gene35419.t1 | AT5G42100 | 54.969 | 322 | 140 | 3 | 30 | 346 | 28 | 349 | 9.89e-125 | 367 |
MS.gene35419.t1 | AT1G30080 | 47.875 | 353 | 173 | 3 | 3 | 344 | 1 | 353 | 2.18e-115 | 341 |
MS.gene35419.t1 | AT1G30080 | 47.875 | 353 | 173 | 3 | 3 | 344 | 1 | 353 | 3.10e-115 | 342 |
MS.gene35419.t1 | AT3G15800 | 50.311 | 322 | 154 | 3 | 29 | 345 | 43 | 363 | 2.56e-114 | 339 |
MS.gene35419.t1 | AT4G18340 | 45.349 | 344 | 185 | 2 | 4 | 345 | 10 | 352 | 3.58e-111 | 330 |
MS.gene35419.t1 | AT4G18340 | 45.349 | 344 | 185 | 2 | 4 | 345 | 10 | 352 | 4.14e-111 | 331 |
MS.gene35419.t1 | AT2G26600 | 44.751 | 362 | 185 | 4 | 29 | 382 | 34 | 388 | 6.02e-109 | 325 |
MS.gene35419.t1 | AT4G26830 | 43.804 | 347 | 185 | 6 | 1 | 343 | 1 | 341 | 4.85e-97 | 297 |
MS.gene35419.t1 | AT4G26830 | 45.283 | 318 | 168 | 4 | 30 | 343 | 30 | 345 | 2.41e-95 | 293 |
MS.gene35419.t1 | AT2G05790 | 44.345 | 336 | 176 | 6 | 30 | 356 | 26 | 359 | 1.13e-93 | 289 |
MS.gene35419.t1 | AT5G55180 | 42.901 | 324 | 180 | 3 | 29 | 348 | 27 | 349 | 1.24e-93 | 288 |
MS.gene35419.t1 | AT5G55180 | 42.901 | 324 | 180 | 3 | 29 | 348 | 27 | 349 | 1.61e-93 | 288 |
MS.gene35419.t1 | AT2G26600 | 47.260 | 292 | 146 | 2 | 94 | 382 | 8 | 294 | 6.05e-93 | 281 |
MS.gene35419.t1 | AT5G56590 | 44.099 | 322 | 176 | 3 | 26 | 343 | 23 | 344 | 1.06e-92 | 287 |
MS.gene35419.t1 | AT2G16230 | 42.197 | 346 | 189 | 4 | 24 | 358 | 19 | 364 | 8.18e-92 | 285 |
MS.gene35419.t1 | AT5G42720 | 42.566 | 343 | 190 | 5 | 8 | 345 | 6 | 346 | 1.67e-91 | 282 |
MS.gene35419.t1 | AT5G24318 | 41.159 | 345 | 192 | 6 | 7 | 345 | 7 | 346 | 1.09e-90 | 278 |
MS.gene35419.t1 | AT5G24318 | 41.159 | 345 | 192 | 6 | 7 | 345 | 7 | 346 | 1.84e-89 | 277 |
MS.gene35419.t1 | AT5G24318 | 41.159 | 345 | 192 | 6 | 7 | 345 | 7 | 346 | 3.08e-89 | 277 |
MS.gene35419.t1 | AT4G34480 | 42.286 | 350 | 192 | 5 | 1 | 345 | 1 | 345 | 6.77e-88 | 270 |
MS.gene35419.t1 | AT4G34480 | 41.713 | 362 | 196 | 6 | 1 | 352 | 1 | 357 | 2.62e-86 | 271 |
MS.gene35419.t1 | AT4G29360 | 42.210 | 353 | 190 | 6 | 6 | 348 | 10 | 358 | 1.04e-83 | 265 |
MS.gene35419.t1 | AT3G07320 | 41.265 | 332 | 177 | 6 | 30 | 349 | 26 | 351 | 2.13e-83 | 262 |
MS.gene35419.t1 | AT4G29360 | 43.168 | 322 | 179 | 3 | 30 | 348 | 28 | 348 | 1.19e-82 | 262 |
MS.gene35419.t1 | AT4G14080 | 37.067 | 375 | 216 | 6 | 1 | 356 | 1 | 374 | 2.11e-78 | 249 |
MS.gene35419.t1 | AT2G01630 | 40.248 | 323 | 186 | 3 | 29 | 345 | 23 | 344 | 8.30e-78 | 245 |
MS.gene35419.t1 | AT2G01630 | 40.248 | 323 | 186 | 3 | 29 | 345 | 23 | 344 | 2.20e-77 | 246 |
MS.gene35419.t1 | AT2G01630 | 40.373 | 322 | 185 | 3 | 30 | 345 | 24 | 344 | 2.20e-76 | 245 |
MS.gene35419.t1 | AT3G23770 | 40.120 | 334 | 190 | 6 | 30 | 354 | 38 | 370 | 3.46e-74 | 238 |
MS.gene35419.t1 | AT4G16260 | 37.092 | 337 | 200 | 6 | 7 | 341 | 4 | 330 | 1.05e-73 | 233 |
MS.gene35419.t1 | AT3G55430 | 37.912 | 364 | 205 | 12 | 2 | 358 | 7 | 356 | 3.60e-72 | 233 |
MS.gene35419.t1 | AT1G11820 | 38.507 | 335 | 198 | 4 | 30 | 357 | 45 | 378 | 4.42e-72 | 230 |
MS.gene35419.t1 | AT3G13560 | 37.651 | 332 | 192 | 4 | 20 | 341 | 17 | 343 | 7.70e-72 | 233 |
MS.gene35419.t1 | AT3G13560 | 37.651 | 332 | 192 | 4 | 20 | 341 | 17 | 343 | 7.70e-72 | 233 |
MS.gene35419.t1 | AT3G13560 | 37.651 | 332 | 192 | 4 | 20 | 341 | 17 | 343 | 7.70e-72 | 233 |
MS.gene35419.t1 | AT3G13560 | 37.651 | 332 | 192 | 4 | 20 | 341 | 17 | 343 | 7.70e-72 | 233 |
MS.gene35419.t1 | AT3G13560 | 37.651 | 332 | 192 | 4 | 20 | 341 | 17 | 343 | 7.70e-72 | 233 |
MS.gene35419.t1 | AT1G11820 | 39.375 | 320 | 187 | 3 | 30 | 343 | 45 | 363 | 9.98e-71 | 229 |
MS.gene35419.t1 | AT1G11820 | 39.375 | 320 | 187 | 3 | 30 | 343 | 45 | 363 | 1.83e-70 | 230 |
MS.gene35419.t1 | AT2G39640 | 40.122 | 329 | 183 | 6 | 30 | 356 | 31 | 347 | 2.21e-69 | 228 |
MS.gene35419.t1 | AT3G46570 | 39.017 | 346 | 196 | 10 | 9 | 345 | 5 | 344 | 6.00e-69 | 221 |
MS.gene35419.t1 | AT4G16260 | 37.662 | 308 | 182 | 5 | 36 | 341 | 2 | 301 | 6.85e-69 | 220 |
MS.gene35419.t1 | AT3G57260 | 35.608 | 337 | 200 | 10 | 10 | 343 | 14 | 336 | 2.80e-66 | 214 |
MS.gene35419.t1 | AT3G57260 | 35.608 | 337 | 200 | 10 | 10 | 343 | 30 | 352 | 5.38e-66 | 214 |
MS.gene35419.t1 | AT3G57270 | 35.952 | 331 | 196 | 9 | 20 | 343 | 16 | 337 | 5.48e-65 | 211 |
MS.gene35419.t1 | AT4G34480 | 44.672 | 244 | 130 | 1 | 114 | 352 | 3 | 246 | 2.91e-63 | 207 |
MS.gene35419.t1 | AT3G61810 | 34.365 | 323 | 194 | 7 | 30 | 343 | 56 | 369 | 2.99e-62 | 204 |
MS.gene35419.t1 | AT5G24318 | 45.024 | 211 | 111 | 2 | 136 | 345 | 1 | 207 | 1.41e-61 | 201 |
MS.gene35419.t1 | AT1G66250 | 35.583 | 326 | 202 | 4 | 29 | 348 | 32 | 355 | 4.15e-61 | 205 |
MS.gene35419.t1 | AT3G57240 | 33.968 | 315 | 191 | 8 | 30 | 341 | 36 | 336 | 1.07e-57 | 192 |
MS.gene35419.t1 | AT1G77780 | 33.333 | 342 | 212 | 12 | 7 | 343 | 2 | 332 | 1.45e-57 | 192 |
MS.gene35419.t1 | AT1G77790 | 33.526 | 346 | 214 | 11 | 8 | 346 | 8 | 344 | 1.80e-57 | 191 |
MS.gene35419.t1 | AT5G20390 | 34.311 | 341 | 210 | 10 | 8 | 343 | 12 | 343 | 1.87e-56 | 189 |
MS.gene35419.t1 | AT5G20340 | 33.051 | 354 | 210 | 12 | 6 | 343 | 11 | 353 | 3.41e-53 | 180 |
MS.gene35419.t1 | AT5G20330 | 32.857 | 350 | 208 | 10 | 9 | 343 | 7 | 344 | 4.09e-52 | 177 |
MS.gene35419.t1 | AT1G33220 | 30.814 | 344 | 212 | 10 | 6 | 343 | 11 | 334 | 3.86e-45 | 159 |
MS.gene35419.t1 | AT1G64760 | 31.198 | 359 | 222 | 13 | 3 | 348 | 1 | 347 | 6.20e-45 | 162 |
MS.gene35419.t1 | AT1G64760 | 31.198 | 359 | 222 | 13 | 3 | 348 | 1 | 347 | 6.20e-45 | 162 |
MS.gene35419.t1 | AT2G19440 | 32.121 | 330 | 207 | 10 | 29 | 348 | 21 | 343 | 9.36e-45 | 161 |
MS.gene35419.t1 | AT2G19440 | 32.121 | 330 | 207 | 10 | 29 | 348 | 21 | 343 | 9.36e-45 | 161 |
MS.gene35419.t1 | AT3G55780 | 32.492 | 317 | 194 | 12 | 42 | 347 | 48 | 355 | 1.14e-43 | 156 |
MS.gene35419.t1 | AT5G18220 | 29.499 | 339 | 223 | 10 | 11 | 341 | 13 | 343 | 2.93e-43 | 157 |
MS.gene35419.t1 | AT5G64790 | 30.056 | 356 | 219 | 13 | 10 | 351 | 14 | 353 | 3.74e-41 | 151 |
MS.gene35419.t1 | AT3G04010 | 31.519 | 349 | 219 | 13 | 12 | 348 | 15 | 355 | 5.79e-41 | 151 |
MS.gene35419.t1 | AT5G58480 | 31.845 | 336 | 202 | 12 | 30 | 349 | 27 | 351 | 4.99e-40 | 148 |
MS.gene35419.t1 | AT5G20560 | 29.970 | 337 | 218 | 10 | 6 | 335 | 11 | 336 | 2.09e-39 | 144 |
MS.gene35419.t1 | AT4G31140 | 28.895 | 353 | 231 | 13 | 2 | 345 | 5 | 346 | 2.48e-39 | 146 |
MS.gene35419.t1 | AT5G20870 | 32.320 | 362 | 212 | 16 | 12 | 350 | 10 | 361 | 2.74e-39 | 147 |
MS.gene35419.t1 | AT3G24330 | 29.379 | 354 | 226 | 13 | 10 | 348 | 19 | 363 | 1.66e-37 | 142 |
MS.gene35419.t1 | AT4G17180 | 30.816 | 331 | 205 | 13 | 30 | 348 | 26 | 344 | 7.95e-37 | 139 |
MS.gene35419.t1 | AT5G58090 | 28.875 | 329 | 217 | 11 | 30 | 347 | 23 | 345 | 8.35e-36 | 137 |
Find 64 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAAGCAATGGTTTGGATTT+TGG | 0.082492 | 2.1:-15581085 | MS.gene35419:CDS |
TACATTAATTGAAGTGATTT+TGG | 0.138128 | 2.1:+15580826 | None:intergenic |
ATGCTGTTTCTCACCGTTTC+AGG | 0.170134 | 2.1:-15581433 | MS.gene35419:intron |
TCTCTACATTCTTACATTCT+TGG | 0.176614 | 2.1:-15579812 | MS.gene35419:CDS |
ACCCATGATTGTGCCTTAAT+AGG | 0.222049 | 2.1:+15580881 | None:intergenic |
TACATTCTTGGTGTTTGTTT+GGG | 0.256184 | 2.1:-15579800 | MS.gene35419:CDS |
TTACATTCTTGGTGTTTGTT+TGG | 0.257209 | 2.1:-15579801 | MS.gene35419:CDS |
GAGAATGTTGTTAGAACATT+TGG | 0.274660 | 2.1:+15580959 | None:intergenic |
TGCTGTTTACGCTGCTATAA+AGG | 0.295122 | 2.1:-15580420 | MS.gene35419:CDS |
TATAATGCACTTGTTAATCT+TGG | 0.303970 | 2.1:-15580734 | MS.gene35419:CDS |
TGCATTATACACTGATTTCA+TGG | 0.317483 | 2.1:+15580748 | None:intergenic |
TCAAATGTTGAATTCATGAT+AGG | 0.342689 | 2.1:-15580932 | MS.gene35419:CDS |
CCCATGATTGTGCCTTAATA+GGG | 0.349920 | 2.1:+15580882 | None:intergenic |
TTCAATCCAAGGTTATAAAC+TGG | 0.351246 | 2.1:+15580137 | None:intergenic |
TTGCCTTCAATAATCATTCC+TGG | 0.356449 | 2.1:+15580086 | None:intergenic |
AATTCATTCCCTCCTTCATC+TGG | 0.362933 | 2.1:-15580659 | MS.gene35419:CDS |
AAGTATGAAAGACCCTATTA+AGG | 0.379469 | 2.1:-15580894 | MS.gene35419:CDS |
TGCAGGAGTTCCTTGTTTCA+TGG | 0.387844 | 2.1:+15580268 | None:intergenic |
TAAATATCAATAGGAATAGA+AGG | 0.399395 | 2.1:+15580242 | None:intergenic |
GTTTATGCAAAGCAATGGTT+TGG | 0.402259 | 2.1:-15581092 | MS.gene35419:CDS |
AATGTAGAGAACAAAATTGA+TGG | 0.411079 | 2.1:+15579825 | None:intergenic |
GCGAAAACATAAATATCAAT+AGG | 0.415882 | 2.1:+15580233 | None:intergenic |
CCTGCATCAGAGAGAAACTA+TGG | 0.421805 | 2.1:-15580182 | MS.gene35419:CDS |
AGTGAAGCTCCAACCTCATC+AGG | 0.429944 | 2.1:+15580335 | None:intergenic |
ATCATAATAATTTGTTGAAG+AGG | 0.447117 | 2.1:-15580295 | MS.gene35419:CDS |
TTTCCAGGAATGATTATTGA+AGG | 0.454929 | 2.1:-15580089 | MS.gene35419:CDS |
TTATACACTGATTTCATGGC+TGG | 0.455792 | 2.1:+15580752 | None:intergenic |
TCATCAGGATCACCTTTAGA+AGG | 0.456945 | 2.1:+15580350 | None:intergenic |
GGTACTCCAGTTTATAACCT+TGG | 0.457524 | 2.1:-15580143 | MS.gene35419:CDS |
CCCTATTAAGGCACAATCAT+GGG | 0.483365 | 2.1:-15580882 | MS.gene35419:CDS |
ACCCTATTAAGGCACAATCA+TGG | 0.484483 | 2.1:-15580883 | MS.gene35419:CDS |
TCTCTAAATGCACCAGATGA+AGG | 0.485251 | 2.1:+15580647 | None:intergenic |
CTGATTTCATGGCTGGAAGA+AGG | 0.490432 | 2.1:+15580759 | None:intergenic |
TTTAACGAAGATTTGAAGAC+TGG | 0.490478 | 2.1:-15580206 | MS.gene35419:CDS |
GAGACAGGTTGGCCTTCTAA+AGG | 0.497141 | 2.1:-15580362 | MS.gene35419:CDS |
TCATAATGCAAATTTGTAGC+AGG | 0.507641 | 2.1:+15580467 | None:intergenic |
CTGGAAAATAACCTCCTTGA+GGG | 0.515738 | 2.1:+15580105 | None:intergenic |
AGTAAAAGACTAACCTGAAA+CGG | 0.517656 | 2.1:+15581420 | None:intergenic |
TTTAGAAGGCCAACCTGTCT+CGG | 0.517858 | 2.1:+15580364 | None:intergenic |
GAGGTTAAGATTTCCGAGAC+AGG | 0.525013 | 2.1:-15580377 | MS.gene35419:CDS |
CCATAGTTTCTCTCTGATGC+AGG | 0.528755 | 2.1:+15580182 | None:intergenic |
AAAATCACTTCAATTAATGT+AGG | 0.530035 | 2.1:-15580824 | MS.gene35419:CDS |
TTATAAACTGGAGTACCATC+AGG | 0.532992 | 2.1:+15580149 | None:intergenic |
TGCGCTTGAAAGCTAAGAAG+TGG | 0.540232 | 2.1:+15580602 | None:intergenic |
TATGGTCTTTATTATCCTGA+TGG | 0.543216 | 2.1:-15580164 | MS.gene35419:CDS |
CATTATCACTCTGAAGAAGA+AGG | 0.546977 | 2.1:+15581453 | None:intergenic |
TAGTTTAATGAAACATGTTG+TGG | 0.553999 | 2.1:+15580524 | None:intergenic |
GTCTTGTTTCAACCGAACCC+TGG | 0.554364 | 2.1:-15580500 | MS.gene35419:CDS |
GGATCAATAGAACCAGGGTT+CGG | 0.558568 | 2.1:+15580488 | None:intergenic |
AAAGGTGATCCTGATGAGGT+TGG | 0.562864 | 2.1:-15580344 | MS.gene35419:CDS |
AAGAGGATTGCCATGAAACA+AGG | 0.577245 | 2.1:-15580278 | MS.gene35419:CDS |
GATTTGTTTATGCAAAGCAA+TGG | 0.583237 | 2.1:-15581097 | MS.gene35419:CDS |
GTAGCAGGATCAATAGAACC+AGG | 0.591805 | 2.1:+15580482 | None:intergenic |
TTAAGATTTCCGAGACAGGT+TGG | 0.593135 | 2.1:-15580373 | MS.gene35419:CDS |
CTAAATGCACCAGATGAAGG+AGG | 0.616012 | 2.1:+15580650 | None:intergenic |
TACGCTGCTATAAAGGCGGT+AGG | 0.619683 | 2.1:-15580413 | MS.gene35419:CDS |
TTCTAAAGGTGATCCTGATG+AGG | 0.626238 | 2.1:-15580348 | MS.gene35419:CDS |
CCTGGAAAATAACCTCCTTG+AGG | 0.629807 | 2.1:+15580104 | None:intergenic |
TAAATGCACCAGATGAAGGA+GGG | 0.634421 | 2.1:+15580651 | None:intergenic |
ACTGCTACACGTGAATGAGA+AGG | 0.642551 | 2.1:+15581031 | None:intergenic |
ACGCTGCTATAAAGGCGGTA+GGG | 0.646566 | 2.1:-15580412 | MS.gene35419:CDS |
TAGCAGGATCAATAGAACCA+GGG | 0.673870 | 2.1:+15580483 | None:intergenic |
GGTAGGGCATAGCGATATCG+AGG | 0.719545 | 2.1:-15580396 | MS.gene35419:CDS |
TGTTTACGCTGCTATAAAGG+CGG | 0.719749 | 2.1:-15580417 | MS.gene35419:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATGAAATAAAAATAATATG+TGG | + | chr2.1:15579883-15579902 | None:intergenic | 10.0% |
!! | AAACTAAAATATACTTACAT+TGG | + | chr2.1:15581191-15581210 | None:intergenic | 15.0% |
!! | AAAATCACTTCAATTAATGT+AGG | - | chr2.1:15580425-15580444 | MS.gene35419:CDS | 20.0% |
!! | TAAATATCAATAGGAATAGA+AGG | + | chr2.1:15581010-15581029 | None:intergenic | 20.0% |
!! | TTCAACAAAATTGTTAAAAC+AGG | + | chr2.1:15580060-15580079 | None:intergenic | 20.0% |
!!! | AAAGAGTAGTTTTTATTTTC+TGG | + | chr2.1:15579984-15580003 | None:intergenic | 20.0% |
!!! | AAGAGTAGTTTTTATTTTCT+GGG | + | chr2.1:15579983-15580002 | None:intergenic | 20.0% |
!!! | ATCATAATAATTTGTTGAAG+AGG | - | chr2.1:15580954-15580973 | MS.gene35419:CDS | 20.0% |
!!! | TACATTAATTGAAGTGATTT+TGG | + | chr2.1:15580426-15580445 | None:intergenic | 20.0% |
! | AATGTAGAGAACAAAATTGA+TGG | + | chr2.1:15581427-15581446 | None:intergenic | 25.0% |
! | GCGAAAACATAAATATCAAT+AGG | + | chr2.1:15581019-15581038 | None:intergenic | 25.0% |
! | TAGTTTAATGAAACATGTTG+TGG | + | chr2.1:15580728-15580747 | None:intergenic | 25.0% |
! | TCAAATGTTGAATTCATGAT+AGG | - | chr2.1:15580317-15580336 | MS.gene35419:CDS | 25.0% |
!! | AATGTAGGAAATGAAGTTTT+AGG | - | chr2.1:15580440-15580459 | MS.gene35419:CDS | 25.0% |
!! | TATAATGCACTTGTTAATCT+TGG | - | chr2.1:15580515-15580534 | MS.gene35419:CDS | 25.0% |
!!! | TATCCTTTTTTTGCATACAA+AGG | - | chr2.1:15580698-15580717 | MS.gene35419:CDS | 25.0% |
!!! | TCCAATTTTTGTTAATTTGC+AGG | - | chr2.1:15581395-15581414 | MS.gene35419:intron | 25.0% |
!!! | TTGGATTTTGGAATAAACTA+TGG | - | chr2.1:15580176-15580195 | MS.gene35419:CDS | 25.0% |
AAGTATGAAAGACCCTATTA+AGG | - | chr2.1:15580355-15580374 | MS.gene35419:CDS | 30.0% | |
AGTAAAAGACTAACCTGAAA+CGG | + | chr2.1:15579832-15579851 | None:intergenic | 30.0% | |
GAGAATGTTGTTAGAACATT+TGG | + | chr2.1:15580293-15580312 | None:intergenic | 30.0% | |
GCCTGCAAATTAACAAAAAT+TGG | + | chr2.1:15581399-15581418 | None:intergenic | 30.0% | |
TATGGTCTTTATTATCCTGA+TGG | - | chr2.1:15581085-15581104 | MS.gene35419:CDS | 30.0% | |
TCACCTTTGTATGCAAAAAA+AGG | + | chr2.1:15580704-15580723 | None:intergenic | 30.0% | |
TCATAATGCAAATTTGTAGC+AGG | + | chr2.1:15580785-15580804 | None:intergenic | 30.0% | |
TCTCTACATTCTTACATTCT+TGG | - | chr2.1:15581437-15581456 | MS.gene35419:CDS | 30.0% | |
TTCAATCCAAGGTTATAAAC+TGG | + | chr2.1:15581115-15581134 | None:intergenic | 30.0% | |
TTTAACGAAGATTTGAAGAC+TGG | - | chr2.1:15581043-15581062 | MS.gene35419:CDS | 30.0% | |
TTTCCAGGAATGATTATTGA+AGG | - | chr2.1:15581160-15581179 | MS.gene35419:intron | 30.0% | |
! | GATTTGTTTATGCAAAGCAA+TGG | - | chr2.1:15580152-15580171 | MS.gene35419:CDS | 30.0% |
!! | GGATAAGCATTGATCAAAAA+AGG | + | chr2.1:15580683-15580702 | None:intergenic | 30.0% |
!! | TACATTCTTGGTGTTTGTTT+GGG | - | chr2.1:15581449-15581468 | MS.gene35419:CDS | 30.0% |
!! | TATTTTCTGGGTATTGTAAG+CGG | + | chr2.1:15579971-15579990 | None:intergenic | 30.0% |
!! | TGCATTATACACTGATTTCA+TGG | + | chr2.1:15580504-15580523 | None:intergenic | 30.0% |
!! | TTACATTCTTGGTGTTTGTT+TGG | - | chr2.1:15581448-15581467 | MS.gene35419:CDS | 30.0% |
!!! | ATTGAAGTGATTTTGGTTTG+TGG | + | chr2.1:15580419-15580438 | None:intergenic | 30.0% |
AATCTTAGACCTTCCGATTA+TGG | - | chr2.1:15581252-15581271 | MS.gene35419:intron | 35.0% | |
GACATCAAATGAGCCATAAT+CGG | + | chr2.1:15581268-15581287 | None:intergenic | 35.0% | |
GTTTATGCAAAGCAATGGTT+TGG | - | chr2.1:15580157-15580176 | MS.gene35419:CDS | 35.0% | |
TTGAAAAATCAAGTCCCTCA+AGG | - | chr2.1:15581130-15581149 | MS.gene35419:intron | 35.0% | |
TTGCCTTCAATAATCATTCC+TGG | + | chr2.1:15581166-15581185 | None:intergenic | 35.0% | |
! | ATAGGAATAGAAGGTTTTGC+AGG | + | chr2.1:15581001-15581020 | None:intergenic | 35.0% |
! | CATTATCACTCTGAAGAAGA+AGG | + | chr2.1:15579799-15579818 | None:intergenic | 35.0% |
! | TTATAAACTGGAGTACCATC+AGG | + | chr2.1:15581103-15581122 | None:intergenic | 35.0% |
!! | CAAAGCAATGGTTTGGATTT+TGG | - | chr2.1:15580164-15580183 | MS.gene35419:CDS | 35.0% |
!! | GGACTTGATTTTTCAATCCA+AGG | + | chr2.1:15581126-15581145 | None:intergenic | 35.0% |
!! | TTATACACTGATTTCATGGC+TGG | + | chr2.1:15580500-15580519 | None:intergenic | 35.0% |
!!! | AAGTGATTTTGGTTTGTGGA+AGG | + | chr2.1:15580415-15580434 | None:intergenic | 35.0% |
!!! | ATTTTGGTTTGTGGAAGGTA+TGG | + | chr2.1:15580410-15580429 | None:intergenic | 35.0% |
AAAAATCAAGTCCCTCAAGG+AGG | - | chr2.1:15581133-15581152 | MS.gene35419:intron | 40.0% | |
AAGAGGATTGCCATGAAACA+AGG | - | chr2.1:15580971-15580990 | MS.gene35419:CDS | 40.0% | |
AATTCATTCCCTCCTTCATC+TGG | - | chr2.1:15580590-15580609 | MS.gene35419:CDS | 40.0% | |
ACCAATCGAGTAGTCTGTTT+CGG | - | chr2.1:15581297-15581316 | MS.gene35419:intron | 40.0% | |
ACCCATGATTGTGCCTTAAT+AGG | + | chr2.1:15580371-15580390 | None:intergenic | 40.0% | |
ACCCTATTAAGGCACAATCA+TGG | - | chr2.1:15580366-15580385 | MS.gene35419:CDS | 40.0% | |
CCCATGATTGTGCCTTAATA+GGG | + | chr2.1:15580370-15580389 | None:intergenic | 40.0% | |
CCCTATTAAGGCACAATCAT+GGG | - | chr2.1:15580367-15580386 | MS.gene35419:CDS | 40.0% | |
CTGGAAAATAACCTCCTTGA+GGG | + | chr2.1:15581147-15581166 | None:intergenic | 40.0% | |
GGTACTCCAGTTTATAACCT+TGG | - | chr2.1:15581106-15581125 | MS.gene35419:intron | 40.0% | |
GTCTTACTGTCACGATTCAT+TGG | + | chr2.1:15579941-15579960 | None:intergenic | 40.0% | |
TAAATGCACCAGATGAAGGA+GGG | + | chr2.1:15580601-15580620 | None:intergenic | 40.0% | |
TAGCAGGATCAATAGAACCA+GGG | + | chr2.1:15580769-15580788 | None:intergenic | 40.0% | |
TCAAATGAGCCATAATCGGA+AGG | + | chr2.1:15581264-15581283 | None:intergenic | 40.0% | |
TCATCAGGATCACCTTTAGA+AGG | + | chr2.1:15580902-15580921 | None:intergenic | 40.0% | |
TCTCTAAATGCACCAGATGA+AGG | + | chr2.1:15580605-15580624 | None:intergenic | 40.0% | |
TGTTTACGCTGCTATAAAGG+CGG | - | chr2.1:15580832-15580851 | MS.gene35419:CDS | 40.0% | |
TTAAGATTTCCGAGACAGGT+TGG | - | chr2.1:15580876-15580895 | MS.gene35419:CDS | 40.0% | |
! | TGCTGTTTACGCTGCTATAA+AGG | - | chr2.1:15580829-15580848 | MS.gene35419:CDS | 40.0% |
! | TTCTAAAGGTGATCCTGATG+AGG | - | chr2.1:15580901-15580920 | MS.gene35419:CDS | 40.0% |
AAAGGTGATCCTGATGAGGT+TGG | - | chr2.1:15580905-15580924 | MS.gene35419:CDS | 45.0% | |
ACTGCTACACGTGAATGAGA+AGG | + | chr2.1:15580221-15580240 | None:intergenic | 45.0% | |
CCATAGTTTCTCTCTGATGC+AGG | + | chr2.1:15581070-15581089 | None:intergenic | 45.0% | |
CCTGCATCAGAGAGAAACTA+TGG | - | chr2.1:15581067-15581086 | MS.gene35419:CDS | 45.0% | |
CCTGGAAAATAACCTCCTTG+AGG | + | chr2.1:15581148-15581167 | None:intergenic | 45.0% | |
CTAAATGCACCAGATGAAGG+AGG | + | chr2.1:15580602-15580621 | None:intergenic | 45.0% | |
CTGATTTCATGGCTGGAAGA+AGG | + | chr2.1:15580493-15580512 | None:intergenic | 45.0% | |
GAGGTTAAGATTTCCGAGAC+AGG | - | chr2.1:15580872-15580891 | MS.gene35419:CDS | 45.0% | |
GGATCAATAGAACCAGGGTT+CGG | + | chr2.1:15580764-15580783 | None:intergenic | 45.0% | |
GTAGCAGGATCAATAGAACC+AGG | + | chr2.1:15580770-15580789 | None:intergenic | 45.0% | |
TCCGAAACAGACTACTCGAT+TGG | + | chr2.1:15581301-15581320 | None:intergenic | 45.0% | |
TGCGCTTGAAAGCTAAGAAG+TGG | + | chr2.1:15580650-15580669 | None:intergenic | 45.0% | |
TTTAGAAGGCCAACCTGTCT+CGG | + | chr2.1:15580888-15580907 | None:intergenic | 45.0% | |
! | TGCAGGAGTTCCTTGTTTCA+TGG | + | chr2.1:15580984-15581003 | None:intergenic | 45.0% |
!! | ATGCTGTTTCTCACCGTTTC+AGG | - | chr2.1:15579816-15579835 | MS.gene35419:CDS | 45.0% |
!! | CCTCAAGGAGGTTATTTTCC+AGG | - | chr2.1:15581145-15581164 | MS.gene35419:intron | 45.0% |
ACGCTGCTATAAAGGCGGTA+GGG | - | chr2.1:15580837-15580856 | MS.gene35419:CDS | 50.0% | |
ACTACTCGATTGGTGAGCTG+AGG | + | chr2.1:15581291-15581310 | None:intergenic | 50.0% | |
AGTGAAGCTCCAACCTCATC+AGG | + | chr2.1:15580917-15580936 | None:intergenic | 50.0% | |
CTACTCGATTGGTGAGCTGA+GGG | + | chr2.1:15581290-15581309 | None:intergenic | 50.0% | |
TACGCTGCTATAAAGGCGGT+AGG | - | chr2.1:15580836-15580855 | MS.gene35419:CDS | 50.0% | |
!! | GAGACAGGTTGGCCTTCTAA+AGG | - | chr2.1:15580887-15580906 | MS.gene35419:CDS | 50.0% |
!! | GTCTTGTTTCAACCGAACCC+TGG | - | chr2.1:15580749-15580768 | MS.gene35419:CDS | 50.0% |
GGTAGGGCATAGCGATATCG+AGG | - | chr2.1:15580853-15580872 | MS.gene35419:CDS | 55.0% | |
! | GGGTATTGTAAGCGGCAGAG+TGG | + | chr2.1:15579963-15579982 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 15579783 | 15581488 | 15579783 | ID=MS.gene35419 |
chr2.1 | mRNA | 15579783 | 15581488 | 15579783 | ID=MS.gene35419.t1;Parent=MS.gene35419 |
chr2.1 | exon | 15581434 | 15581488 | 15581434 | ID=MS.gene35419.t1.exon1;Parent=MS.gene35419.t1 |
chr2.1 | CDS | 15581434 | 15581488 | 15581434 | ID=cds.MS.gene35419.t1;Parent=MS.gene35419.t1 |
chr2.1 | exon | 15580079 | 15581118 | 15580079 | ID=MS.gene35419.t1.exon2;Parent=MS.gene35419.t1 |
chr2.1 | CDS | 15580079 | 15581118 | 15580079 | ID=cds.MS.gene35419.t1;Parent=MS.gene35419.t1 |
chr2.1 | exon | 15579783 | 15579854 | 15579783 | ID=MS.gene35419.t1.exon3;Parent=MS.gene35419.t1 |
chr2.1 | CDS | 15579783 | 15579854 | 15579783 | ID=cds.MS.gene35419.t1;Parent=MS.gene35419.t1 |
Gene Sequence |
Protein sequence |