Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35578.t1 | KEH34956.1 | 97.5 | 317 | 7 | 1 | 1 | 316 | 29 | 345 | 7.10E-174 | 619.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35578.t1 | Q9ZPE7 | 71.6 | 313 | 82 | 4 | 8 | 316 | 5 | 314 | 1.9e-122 | 440.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35578.t1 | A0A072UZU4 | 97.5 | 317 | 7 | 1 | 1 | 316 | 29 | 345 | 5.1e-174 | 619.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051023 | MS.gene35578 | 0.80251 | 5.42E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35578.t1 | MTR_3g074830 | 97.476 | 317 | 7 | 1 | 1 | 316 | 29 | 345 | 0.0 | 631 |
| MS.gene35578.t1 | MTR_5g064360 | 70.846 | 319 | 87 | 4 | 1 | 316 | 1 | 316 | 1.76e-162 | 455 |
| MS.gene35578.t1 | MTR_5g464340 | 71.787 | 319 | 83 | 5 | 1 | 316 | 1 | 315 | 6.61e-162 | 454 |
| MS.gene35578.t1 | MTR_5g064340 | 71.787 | 319 | 83 | 5 | 1 | 316 | 1 | 315 | 6.61e-162 | 454 |
| MS.gene35578.t1 | MTR_5g064345 | 72.436 | 312 | 78 | 5 | 8 | 316 | 9 | 315 | 8.56e-161 | 451 |
| MS.gene35578.t1 | MTR_3g074860 | 70.470 | 298 | 74 | 4 | 19 | 316 | 21 | 304 | 5.03e-150 | 423 |
| MS.gene35578.t1 | MTR_3g074890 | 69.799 | 298 | 76 | 4 | 19 | 316 | 21 | 304 | 2.08e-148 | 419 |
| MS.gene35578.t1 | MTR_4g094240 | 61.512 | 291 | 99 | 3 | 26 | 316 | 23 | 300 | 1.92e-127 | 366 |
| MS.gene35578.t1 | MTR_2g009070 | 54.397 | 307 | 122 | 6 | 11 | 316 | 15 | 304 | 7.32e-120 | 347 |
| MS.gene35578.t1 | MTR_1g076470 | 37.818 | 275 | 151 | 9 | 38 | 301 | 64 | 329 | 4.10e-43 | 151 |
| MS.gene35578.t1 | MTR_4g033790 | 37.993 | 279 | 152 | 9 | 38 | 305 | 65 | 333 | 2.10e-42 | 150 |
| MS.gene35578.t1 | MTR_8g071310 | 88.235 | 68 | 8 | 0 | 249 | 316 | 18 | 85 | 1.21e-35 | 124 |
| MS.gene35578.t1 | MTR_8g088900 | 74.444 | 90 | 23 | 0 | 227 | 316 | 283 | 372 | 9.76e-35 | 130 |
| MS.gene35578.t1 | MTR_4g013230 | 92.308 | 65 | 2 | 1 | 252 | 316 | 79 | 140 | 2.68e-33 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35578.t1 | AT4G08950 | 73.090 | 301 | 74 | 4 | 20 | 316 | 17 | 314 | 6.78e-157 | 441 |
| MS.gene35578.t1 | AT1G35140 | 63.226 | 310 | 106 | 4 | 8 | 315 | 5 | 308 | 9.31e-139 | 395 |
| MS.gene35578.t1 | AT5G64260 | 57.367 | 319 | 119 | 5 | 1 | 316 | 1 | 305 | 4.37e-127 | 365 |
| MS.gene35578.t1 | AT5G09440 | 52.516 | 318 | 109 | 8 | 1 | 316 | 1 | 278 | 2.30e-101 | 299 |
| MS.gene35578.t1 | AT3G02970 | 34.228 | 298 | 161 | 6 | 48 | 314 | 37 | 330 | 2.18e-49 | 167 |
| MS.gene35578.t1 | AT5G51550 | 39.024 | 287 | 154 | 9 | 38 | 313 | 55 | 331 | 8.45e-47 | 161 |
| MS.gene35578.t1 | AT2G35150 | 36.923 | 325 | 176 | 14 | 7 | 312 | 2 | 316 | 3.24e-41 | 146 |
| MS.gene35578.t1 | AT2G17230 | 35.473 | 296 | 168 | 10 | 32 | 313 | 71 | 357 | 2.38e-40 | 145 |
Find 67 sgRNAs with CRISPR-Local
Find 79 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGCTTGTCCTGGTGTTTA+TGG | 0.171889 | 3.3:+64390754 | MS.gene35578:CDS |
| ATCAAGAATTTGCTTGTTTA+GGG | 0.208436 | 3.3:-64390308 | None:intergenic |
| CATCAAGAATTTGCTTGTTT+AGG | 0.214856 | 3.3:-64390309 | None:intergenic |
| GTTCACCTTTGGAAGCTAAT+TGG | 0.254782 | 3.3:-64390375 | None:intergenic |
| TTTGAGAAGGGATTGAAAAT+TGG | 0.273364 | 3.3:-64389981 | None:intergenic |
| TTGCAAAATTTGCTTACATT+TGG | 0.273951 | 3.3:+64390515 | MS.gene35578:CDS |
| TGATGGAATGGTGATAAATT+TGG | 0.283166 | 3.3:+64390648 | MS.gene35578:CDS |
| CTTGATGAGAATTACTCATT+AGG | 0.306480 | 3.3:+64390325 | MS.gene35578:CDS |
| GCGCTTTGTGGACCGTAAAT+TGG | 0.317106 | 3.3:-64390592 | None:intergenic |
| CCATTTCACCAACCAATTTA+CGG | 0.318307 | 3.3:+64390580 | MS.gene35578:CDS |
| TGCAAAATTTGCTTACATTT+GGG | 0.320080 | 3.3:+64390516 | MS.gene35578:CDS |
| ACACGGTTCTTCTTCTTCAA+TGG | 0.340114 | 3.3:+64390474 | MS.gene35578:CDS |
| TTTGGAAATGGTTACTTTCA+AGG | 0.342445 | 3.3:+64390703 | MS.gene35578:CDS |
| TTCAATGCTCATGGTGATAA+TGG | 0.347620 | 3.3:+64390838 | MS.gene35578:CDS |
| TTGCTTGTTGATTCTACTAC+TGG | 0.362064 | 3.3:+64390808 | MS.gene35578:CDS |
| GGAACTGCAACAAACCCTTT+TGG | 0.395578 | 3.3:+64390685 | MS.gene35578:CDS |
| CCGTAAATTGGTTGGTGAAA+TGG | 0.399220 | 3.3:-64390580 | None:intergenic |
| GGAATCTTTGTGTTCACCTT+TGG | 0.401182 | 3.3:-64390386 | None:intergenic |
| CACAACGGTCCATTACTCTA+TGG | 0.410127 | 3.3:+64390094 | MS.gene35578:CDS |
| AACAACGATGTAGGGCTTGA+TGG | 0.410771 | 3.3:+64390631 | MS.gene35578:CDS |
| AAATCTCAGTCAATTTAATC+TGG | 0.417323 | 3.3:+64390119 | MS.gene35578:CDS |
| GCAACCAATGGTGCGCTTTG+TGG | 0.422076 | 3.3:-64390604 | None:intergenic |
| TCAAGCCCTACATCGTTGTT+TGG | 0.423713 | 3.3:-64390628 | None:intergenic |
| TGAAAGTAACCATTTCCAAA+AGG | 0.429612 | 3.3:-64390700 | None:intergenic |
| GAAAGTAACCATTTCCAAAA+GGG | 0.440576 | 3.3:-64390699 | None:intergenic |
| GTTGAGCAAGATAATGTAGA+AGG | 0.441408 | 3.3:-64390892 | None:intergenic |
| GCTGAAACTGAAGGTTGGTT+TGG | 0.443189 | 3.3:-64390217 | None:intergenic |
| GAAGCTGCTTCAGCTTGTCC+TGG | 0.453010 | 3.3:+64390745 | MS.gene35578:CDS |
| AGATGTTAGTACAACGTTGA+TGG | 0.462886 | 3.3:-64390407 | None:intergenic |
| AGTTTCTAGCAGCTGAAGAA+AGG | 0.492873 | 3.3:-64390030 | None:intergenic |
| TGTCCTGGTGTTTATGGTAA+AGG | 0.498489 | 3.3:+64390760 | MS.gene35578:CDS |
| ACCATGCTGAAACTGAAGGT+TGG | 0.500598 | 3.3:-64390222 | None:intergenic |
| TCAGTCAATTTAATCTGGTA+TGG | 0.500777 | 3.3:+64390124 | MS.gene35578:CDS |
| GGTGCTTACCCTGGTTATGC+TGG | 0.504722 | 3.3:+64390781 | MS.gene35578:CDS |
| AAATTTGCTTACATTTGGGT+TGG | 0.505466 | 3.3:+64390520 | MS.gene35578:CDS |
| AACTCAGAAACACAGTGTCC+AGG | 0.509516 | 3.3:+64390544 | MS.gene35578:CDS |
| TCTTCAATGGAATCCAGAAA+AGG | 0.511852 | 3.3:+64390487 | MS.gene35578:CDS |
| CGGTCCACAAAGCGCACCAT+TGG | 0.512236 | 3.3:+64390600 | MS.gene35578:CDS |
| AGCAAATCACCAGCATAACC+AGG | 0.517128 | 3.3:-64390790 | None:intergenic |
| AGTGTCCAGGGTTATGTGCT+TGG | 0.528873 | 3.3:+64390557 | MS.gene35578:CDS |
| TTGCACCAAACAACGATGTA+GGG | 0.528944 | 3.3:+64390623 | MS.gene35578:CDS |
| CGATGTAGGGCTTGATGGAA+TGG | 0.529717 | 3.3:+64390636 | MS.gene35578:CDS |
| GTTGCACCAAACAACGATGT+AGG | 0.531920 | 3.3:+64390622 | MS.gene35578:CDS |
| AATGGAATCCAGAAAAGGTA+AGG | 0.547288 | 3.3:+64390492 | MS.gene35578:CDS |
| ATGCTCATGGTGATAATGGA+AGG | 0.567528 | 3.3:+64390842 | MS.gene35578:CDS |
| ACTCAGAAACACAGTGTCCA+GGG | 0.569464 | 3.3:+64390545 | MS.gene35578:CDS |
| ATTATCCAATTAGCTTCCAA+AGG | 0.570977 | 3.3:+64390370 | MS.gene35578:CDS |
| TTCCACCATGCTGAAACTGA+AGG | 0.570995 | 3.3:-64390226 | None:intergenic |
| TTTGTGGACCGTAAATTGGT+TGG | 0.572936 | 3.3:-64390588 | None:intergenic |
| GTAGAAGGATCATACAAAGC+AGG | 0.575060 | 3.3:-64390877 | None:intergenic |
| TATGGTAAAGGTGCTTACCC+TGG | 0.580611 | 3.3:+64390772 | MS.gene35578:CDS |
| ATTGCAATGTTCTTCAAACA+AGG | 0.583966 | 3.3:-64390915 | None:intergenic |
| GGTGCTAGTTTCAATGCTCA+TGG | 0.589796 | 3.3:+64390829 | MS.gene35578:CDS |
| AACCTTCAGTTTCAGCATGG+TGG | 0.591696 | 3.3:+64390224 | MS.gene35578:CDS |
| TTGCAATGTTCTTCAAACAA+GGG | 0.601668 | 3.3:-64390914 | None:intergenic |
| GCTTCAAGAGGAGCTTCAGA+AGG | 0.602180 | 3.3:-64390727 | None:intergenic |
| TCGTTGTTTGGTGCAACCAA+TGG | 0.602504 | 3.3:-64390616 | None:intergenic |
| TGAAGATGGTGAAGAAAGTG+AGG | 0.607624 | 3.3:-64390191 | None:intergenic |
| ATGGACCGATGTGGCACACA+CGG | 0.610497 | 3.3:+64390457 | MS.gene35578:CDS |
| AAGAACCGTGTGTGCCACAT+CGG | 0.625233 | 3.3:-64390462 | None:intergenic |
| CAAGCTGAAGCAGCTTCAAG+AGG | 0.626827 | 3.3:-64390739 | None:intergenic |
| ACCAACCTTCAGTTTCAGCA+TGG | 0.631067 | 3.3:+64390221 | MS.gene35578:CDS |
| AATGGCCAAGCACATAACCC+TGG | 0.674129 | 3.3:-64390562 | None:intergenic |
| CATAGAGTAATGGACCGTTG+TGG | 0.689245 | 3.3:-64390093 | None:intergenic |
| CAGCTTCTTCATTACCACAA+CGG | 0.692004 | 3.3:+64390079 | MS.gene35578:CDS |
| GCAAATCACCAGCATAACCA+GGG | 0.695085 | 3.3:-64390789 | None:intergenic |
| GCACCTTTACCATAAACACC+AGG | 0.705559 | 3.3:-64390763 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAGAAAAAATTTGAGAA+GGG | - | chr3.3:64389996-64390015 | None:intergenic | 20.0% |
| !! | TAAGAAGAAAAAATTTGAGA+AGG | - | chr3.3:64389997-64390016 | None:intergenic | 20.0% |
| !!! | GATAATGTTTTTGTTTGTTA+AGG | - | chr3.3:64390356-64390375 | None:intergenic | 20.0% |
| ! | AAATCTCAGTCAATTTAATC+TGG | + | chr3.3:64390119-64390138 | MS.gene35578:CDS | 25.0% |
| !! | ATCAAGAATTTGCTTGTTTA+GGG | - | chr3.3:64390311-64390330 | None:intergenic | 25.0% |
| !! | TGCAAAATTTGCTTACATTT+GGG | + | chr3.3:64390516-64390535 | MS.gene35578:CDS | 25.0% |
| !! | TTGATTATAGCTTTTTGTGA+TGG | - | chr3.3:64390160-64390179 | None:intergenic | 25.0% |
| !! | TTGCAAAATTTGCTTACATT+TGG | + | chr3.3:64390515-64390534 | MS.gene35578:CDS | 25.0% |
| CTTGATGAGAATTACTCATT+AGG | + | chr3.3:64390325-64390344 | MS.gene35578:CDS | 30.0% | |
| GAAAGTAACCATTTCCAAAA+GGG | - | chr3.3:64390702-64390721 | None:intergenic | 30.0% | |
| TCAGTCAATTTAATCTGGTA+TGG | + | chr3.3:64390124-64390143 | MS.gene35578:CDS | 30.0% | |
| TGAAAGTAACCATTTCCAAA+AGG | - | chr3.3:64390703-64390722 | None:intergenic | 30.0% | |
| TGATGGAATGGTGATAAATT+TGG | + | chr3.3:64390648-64390667 | MS.gene35578:CDS | 30.0% | |
| TTTGAGAAGGGATTGAAAAT+TGG | - | chr3.3:64389984-64390003 | None:intergenic | 30.0% | |
| ! | AAATTTGCTTACATTTGGGT+TGG | + | chr3.3:64390520-64390539 | MS.gene35578:CDS | 30.0% |
| ! | ATTATCCAATTAGCTTCCAA+AGG | + | chr3.3:64390370-64390389 | MS.gene35578:CDS | 30.0% |
| ! | CATCAAGAATTTGCTTGTTT+AGG | - | chr3.3:64390312-64390331 | None:intergenic | 30.0% |
| ! | GAGATTTTACCATAGAGTAA+TGG | - | chr3.3:64390106-64390125 | None:intergenic | 30.0% |
| ! | TTCTGTAGAACGTTTTTGTA+TGG | + | chr3.3:64390438-64390457 | MS.gene35578:CDS | 30.0% |
| ! | TTTGGAAATGGTTACTTTCA+AGG | + | chr3.3:64390703-64390722 | MS.gene35578:CDS | 30.0% |
| !!! | ATTTTTTCTTTGAGGTGAGA+TGG | - | chr3.3:64390270-64390289 | None:intergenic | 30.0% |
| !!! | CTGTGTAGATTTTTTCTTTG+AGG | - | chr3.3:64390278-64390297 | None:intergenic | 30.0% |
| AATGGAATCCAGAAAAGGTA+AGG | + | chr3.3:64390492-64390511 | MS.gene35578:CDS | 35.0% | |
| AGATGTTAGTACAACGTTGA+TGG | - | chr3.3:64390410-64390429 | None:intergenic | 35.0% | |
| CCATTTCACCAACCAATTTA+CGG | + | chr3.3:64390580-64390599 | MS.gene35578:CDS | 35.0% | |
| GTTGAGCAAGATAATGTAGA+AGG | - | chr3.3:64390895-64390914 | None:intergenic | 35.0% | |
| TCTTCAATGGAATCCAGAAA+AGG | + | chr3.3:64390487-64390506 | MS.gene35578:CDS | 35.0% | |
| TTCAATGCTCATGGTGATAA+TGG | + | chr3.3:64390838-64390857 | MS.gene35578:CDS | 35.0% | |
| ! | TTTTGCAACCTTACCTTTTC+TGG | - | chr3.3:64390503-64390522 | None:intergenic | 35.0% |
| !! | GAGATGGTAGTATTTTTCAG+TGG | - | chr3.3:64390254-64390273 | None:intergenic | 35.0% |
| !! | TTGCTTGTTGATTCTACTAC+TGG | + | chr3.3:64390808-64390827 | MS.gene35578:CDS | 35.0% |
| !!! | AATTTGGCTAGTCTTTTAGC+AGG | + | chr3.3:64390664-64390683 | MS.gene35578:CDS | 35.0% |
| ACACGGTTCTTCTTCTTCAA+TGG | + | chr3.3:64390474-64390493 | MS.gene35578:CDS | 40.0% | |
| CAGCTTCTTCATTACCACAA+CGG | + | chr3.3:64390079-64390098 | MS.gene35578:CDS | 40.0% | |
| GGAATCTTTGTGTTCACCTT+TGG | - | chr3.3:64390389-64390408 | None:intergenic | 40.0% | |
| GTAGAAGGATCATACAAAGC+AGG | - | chr3.3:64390880-64390899 | None:intergenic | 40.0% | |
| TGAAGATGGTGAAGAAAGTG+AGG | - | chr3.3:64390194-64390213 | None:intergenic | 40.0% | |
| TGTCCTGGTGTTTATGGTAA+AGG | + | chr3.3:64390760-64390779 | MS.gene35578:CDS | 40.0% | |
| TTGCACCAAACAACGATGTA+GGG | + | chr3.3:64390623-64390642 | MS.gene35578:CDS | 40.0% | |
| TTTGTGGACCGTAAATTGGT+TGG | - | chr3.3:64390591-64390610 | None:intergenic | 40.0% | |
| ! | GTTCACCTTTGGAAGCTAAT+TGG | - | chr3.3:64390378-64390397 | None:intergenic | 40.0% |
| !! | AGTTTCTAGCAGCTGAAGAA+AGG | - | chr3.3:64390033-64390052 | None:intergenic | 40.0% |
| !! | ATGCTCATGGTGATAATGGA+AGG | + | chr3.3:64390842-64390861 | MS.gene35578:CDS | 40.0% |
| !! | CCGTAAATTGGTTGGTGAAA+TGG | - | chr3.3:64390583-64390602 | None:intergenic | 40.0% |
| !! | GCAACAAACCCTTTTGGAAA+TGG | + | chr3.3:64390691-64390710 | MS.gene35578:CDS | 40.0% |
| !!! | GGTTGGTTTGGTTTTGAAGA+TGG | - | chr3.3:64390208-64390227 | None:intergenic | 40.0% |
| AACAACGATGTAGGGCTTGA+TGG | + | chr3.3:64390631-64390650 | MS.gene35578:CDS | 45.0% | |
| AACCTTCAGTTTCAGCATGG+TGG | + | chr3.3:64390224-64390243 | MS.gene35578:CDS | 45.0% | |
| AACTCAGAAACACAGTGTCC+AGG | + | chr3.3:64390544-64390563 | MS.gene35578:CDS | 45.0% | |
| ACCAACCTTCAGTTTCAGCA+TGG | + | chr3.3:64390221-64390240 | MS.gene35578:CDS | 45.0% | |
| ACCATGCTGAAACTGAAGGT+TGG | - | chr3.3:64390225-64390244 | None:intergenic | 45.0% | |
| ACTCAGAAACACAGTGTCCA+GGG | + | chr3.3:64390545-64390564 | MS.gene35578:CDS | 45.0% | |
| AGCAAATCACCAGCATAACC+AGG | - | chr3.3:64390793-64390812 | None:intergenic | 45.0% | |
| CACAACGGTCCATTACTCTA+TGG | + | chr3.3:64390094-64390113 | MS.gene35578:CDS | 45.0% | |
| GCAAATCACCAGCATAACCA+GGG | - | chr3.3:64390792-64390811 | None:intergenic | 45.0% | |
| GCACCTTTACCATAAACACC+AGG | - | chr3.3:64390766-64390785 | None:intergenic | 45.0% | |
| GTTGCACCAAACAACGATGT+AGG | + | chr3.3:64390622-64390641 | MS.gene35578:CDS | 45.0% | |
| TCAAGCCCTACATCGTTGTT+TGG | - | chr3.3:64390631-64390650 | None:intergenic | 45.0% | |
| TCAGCTTGTCCTGGTGTTTA+TGG | + | chr3.3:64390754-64390773 | MS.gene35578:CDS | 45.0% | |
| TTCCACCATGCTGAAACTGA+AGG | - | chr3.3:64390229-64390248 | None:intergenic | 45.0% | |
| ! | CGTTTTTGTATGGACCGATG+TGG | + | chr3.3:64390448-64390467 | MS.gene35578:CDS | 45.0% |
| ! | GCTGAAACTGAAGGTTGGTT+TGG | - | chr3.3:64390220-64390239 | None:intergenic | 45.0% |
| ! | GGAACTGCAACAAACCCTTT+TGG | + | chr3.3:64390685-64390704 | MS.gene35578:CDS | 45.0% |
| ! | GGTGCTAGTTTCAATGCTCA+TGG | + | chr3.3:64390829-64390848 | MS.gene35578:CDS | 45.0% |
| !! | CATAGAGTAATGGACCGTTG+TGG | - | chr3.3:64390096-64390115 | None:intergenic | 45.0% |
| !! | TATGGTAAAGGTGCTTACCC+TGG | + | chr3.3:64390772-64390791 | MS.gene35578:CDS | 45.0% |
| !! | TCGTTGTTTGGTGCAACCAA+TGG | - | chr3.3:64390619-64390638 | None:intergenic | 45.0% |
| AAGAACCGTGTGTGCCACAT+CGG | - | chr3.3:64390465-64390484 | None:intergenic | 50.0% | |
| AATGGCCAAGCACATAACCC+TGG | - | chr3.3:64390565-64390584 | None:intergenic | 50.0% | |
| AGTGTCCAGGGTTATGTGCT+TGG | + | chr3.3:64390557-64390576 | MS.gene35578:CDS | 50.0% | |
| CAAGCTGAAGCAGCTTCAAG+AGG | - | chr3.3:64390742-64390761 | None:intergenic | 50.0% | |
| CGATGTAGGGCTTGATGGAA+TGG | + | chr3.3:64390636-64390655 | MS.gene35578:CDS | 50.0% | |
| GCGCTTTGTGGACCGTAAAT+TGG | - | chr3.3:64390595-64390614 | None:intergenic | 50.0% | |
| GCTTCAAGAGGAGCTTCAGA+AGG | - | chr3.3:64390730-64390749 | None:intergenic | 50.0% | |
| ATGGACCGATGTGGCACACA+CGG | + | chr3.3:64390457-64390476 | MS.gene35578:CDS | 55.0% | |
| GAAGCTGCTTCAGCTTGTCC+TGG | + | chr3.3:64390745-64390764 | MS.gene35578:CDS | 55.0% | |
| GCAACCAATGGTGCGCTTTG+TGG | - | chr3.3:64390607-64390626 | None:intergenic | 55.0% | |
| GGTGCTTACCCTGGTTATGC+TGG | + | chr3.3:64390781-64390800 | MS.gene35578:CDS | 55.0% | |
| CGGTCCACAAAGCGCACCAT+TGG | + | chr3.3:64390600-64390619 | MS.gene35578:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 64389974 | 64390924 | 64389974 | ID=MS.gene35578 |
| chr3.3 | mRNA | 64389974 | 64390924 | 64389974 | ID=MS.gene35578.t1;Parent=MS.gene35578 |
| chr3.3 | exon | 64389974 | 64390924 | 64389974 | ID=MS.gene35578.t1.exon1;Parent=MS.gene35578.t1 |
| chr3.3 | CDS | 64389974 | 64390924 | 64389974 | ID=cds.MS.gene35578.t1;Parent=MS.gene35578.t1 |
| Gene Sequence |
| Protein sequence |
