Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36531.t1 | XP_024626939.1 | 94.8 | 1030 | 38 | 2 | 1 | 1019 | 1 | 1025 | 0.00E+00 | 1362.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36531.t1 | Q9M2N5 | 58.0 | 659 | 238 | 6 | 372 | 1018 | 64 | 695 | 9.9e-226 | 785.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36531.t1 | A0A396H539 | 94.8 | 1030 | 38 | 2 | 1 | 1019 | 1 | 1025 | 0.0e+00 | 1362.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052309 | MS.gene36531 | 0.805731 | 1.16E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36531.t1 | MTR_4g036325 | 39.796 | 98 | 57 | 2 | 483 | 578 | 1 | 98 | 5.02e-16 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36531.t1 | AT3G42170 | 61.515 | 647 | 216 | 5 | 363 | 1003 | 55 | 674 | 0.0 | 864 |
| MS.gene36531.t1 | AT3G42170 | 61.515 | 647 | 216 | 5 | 363 | 1003 | 33 | 652 | 0.0 | 863 |
| MS.gene36531.t1 | AT1G18560 | 22.006 | 668 | 430 | 22 | 368 | 1006 | 47 | 652 | 3.35e-34 | 141 |
Find 247 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTGCAATGTGCCGTTTA+AGG | 0.121253 | 7.1:-7523037 | None:intergenic |
| CTGCATTTCTGATTGGAATT+TGG | 0.168703 | 7.1:+7523583 | MS.gene36531:CDS |
| TTCTTACTTGGCTGTGTCTC+TGG | 0.182741 | 7.1:-7522879 | None:intergenic |
| AGCATCCTCACCGTATATTT+TGG | 0.187667 | 7.1:-7524311 | None:intergenic |
| TTTGACCGCGCTTGTGAAAA+TGG | 0.198352 | 7.1:+7524819 | MS.gene36531:CDS |
| TTCGATGGTCAGTTGCTAAT+TGG | 0.222525 | 7.1:+7523701 | MS.gene36531:CDS |
| TGGTTTGGTCATCAATAAAA+AGG | 0.227762 | 7.1:-7523892 | None:intergenic |
| GTTGGGATCCACTGTTAAAT+TGG | 0.249980 | 7.1:-7522415 | None:intergenic |
| TTACATTCTTTCATGAAGTT+TGG | 0.253618 | 7.1:+7524113 | MS.gene36531:CDS |
| CACAAGCGCGGTCAAAGATT+CGG | 0.268021 | 7.1:-7524812 | None:intergenic |
| GTTCCAGACTTTGATGTATT+AGG | 0.275187 | 7.1:+7524589 | MS.gene36531:CDS |
| CGACAATCGGCCAATTGATT+TGG | 0.276256 | 7.1:+7521873 | MS.gene36531:CDS |
| ATCTCCTTGAATAGTATTAA+AGG | 0.277779 | 7.1:-7523330 | None:intergenic |
| CCTGAACCACTTCCTGATTC+TGG | 0.290030 | 7.1:+7522519 | MS.gene36531:CDS |
| ATAAAGATGGAAGGATCTTC+TGG | 0.303933 | 7.1:+7524448 | MS.gene36531:CDS |
| CAACATGCCCTTCTACATTC+AGG | 0.315559 | 7.1:-7522954 | None:intergenic |
| AGAACTTTGTTGTCAGATAA+TGG | 0.316486 | 7.1:+7524472 | MS.gene36531:CDS |
| CTCTGGGGTATGTTCTTCAT+TGG | 0.318268 | 7.1:-7522862 | None:intergenic |
| AGTTTCCAGTCTTGAATAGA+TGG | 0.321027 | 7.1:-7524010 | None:intergenic |
| GAAGGTGCTGCTTAAGATTC+AGG | 0.324315 | 7.1:-7523850 | None:intergenic |
| TTCAGGGCTAACCGTTTCTA+TGG | 0.326189 | 7.1:-7522937 | None:intergenic |
| TTCAGTTTCACCAAAATATA+CGG | 0.336519 | 7.1:+7524301 | MS.gene36531:CDS |
| TGAAGTTTGGAAATTACATT+TGG | 0.340740 | 7.1:+7524126 | MS.gene36531:CDS |
| TGCAAGTGATTGTGGGGTAT+TGG | 0.351945 | 7.1:-7522594 | None:intergenic |
| GAATCTTAAGCAGCACCTTC+AGG | 0.354317 | 7.1:+7523853 | MS.gene36531:CDS |
| CTGAGAGCAGAGTCAGAATC+AGG | 0.357778 | 7.1:-7523545 | None:intergenic |
| AGCATTTACTATTTCATAGC+TGG | 0.361317 | 7.1:-7522826 | None:intergenic |
| GTGAGTCATCATTTGGGAAT+TGG | 0.362781 | 7.1:-7522715 | None:intergenic |
| TCTTACTTGGCTGTGTCTCT+GGG | 0.365134 | 7.1:-7522878 | None:intergenic |
| GAATGTTTGCTGCATCATAA+AGG | 0.367171 | 7.1:-7524063 | None:intergenic |
| GTCTGAATTGGATCAGTATC+TGG | 0.369969 | 7.1:+7524546 | MS.gene36531:CDS |
| CCATCAGACAAAGTCTGAAT+TGG | 0.370844 | 7.1:+7524534 | MS.gene36531:CDS |
| GATGGGGTTCCTTTGTAATC+AGG | 0.372513 | 7.1:-7523992 | None:intergenic |
| CGGTTAGCCCTGAATGTAGA+AGG | 0.372610 | 7.1:+7522946 | MS.gene36531:CDS |
| TGGGAATTGGCTAGCTGATC+AGG | 0.374885 | 7.1:-7522702 | None:intergenic |
| CATTGTTGTGCTCTGCTTCA+CGG | 0.375221 | 7.1:-7522122 | None:intergenic |
| GAACTAACCACACCATTGTT+TGG | 0.379336 | 7.1:-7522000 | None:intergenic |
| TCGTTGCTGAGTGGTGCCTC+AGG | 0.380243 | 7.1:-7521955 | None:intergenic |
| GGTCATAGTGAGTCATCATT+TGG | 0.380468 | 7.1:-7522722 | None:intergenic |
| TTGATATGTTGTATTCCATT+TGG | 0.381932 | 7.1:-7523912 | None:intergenic |
| ACCATACTGCATCCAGTCTT+TGG | 0.385506 | 7.1:-7524785 | None:intergenic |
| TCAGAAGGAACAGTAGAAAC+TGG | 0.387424 | 7.1:-7524679 | None:intergenic |
| AATGTTTGCTGCATCATAAA+GGG | 0.389032 | 7.1:-7524062 | None:intergenic |
| CTGGTACCAGCCACCTTAAA+CGG | 0.390950 | 7.1:+7523024 | MS.gene36531:CDS |
| CCAGAATCAGGAAGTGGTTC+AGG | 0.391394 | 7.1:-7522519 | None:intergenic |
| CAATATGTCTCGGGCCATCT+TGG | 0.392944 | 7.1:-7524650 | None:intergenic |
| TCTGCATATGCCGGTGTTAG+TGG | 0.394211 | 7.1:-7524403 | None:intergenic |
| ATTCATCAAAATATTTCATA+AGG | 0.399204 | 7.1:-7523385 | None:intergenic |
| GGGGTATGTTCTTCATTGGT+TGG | 0.401037 | 7.1:-7522858 | None:intergenic |
| GTATATGAAGCATGCTGATT+AGG | 0.401841 | 7.1:-7523092 | None:intergenic |
| TGAACAAATGCAACAAATCC+TGG | 0.406770 | 7.1:-7523278 | None:intergenic |
| CTGATCAGGCGAGAGTGTTT+CGG | 0.406889 | 7.1:-7522688 | None:intergenic |
| TACACATCCCAACAGTCATT+TGG | 0.408652 | 7.1:+7522626 | MS.gene36531:CDS |
| TTTCATGCATAGGTTTAGTA+AGG | 0.409761 | 7.1:-7524192 | None:intergenic |
| CACTTGTTTGTGCCAAAGAC+TGG | 0.411168 | 7.1:+7524773 | MS.gene36531:CDS |
| AAGTAATGATGTGGTTGAAT+TGG | 0.411533 | 7.1:+7522035 | MS.gene36531:CDS |
| TTTGGTGATTGCTGTAGTTA+TGG | 0.417358 | 7.1:+7524249 | MS.gene36531:CDS |
| GAGAGATTCTAGTCTGGCTT+TGG | 0.418217 | 7.1:+7524231 | MS.gene36531:CDS |
| AAATTGGCTAATTCATTCTC+AGG | 0.423893 | 7.1:-7522399 | None:intergenic |
| AAGGCATTGTCAATAAAATA+CGG | 0.425601 | 7.1:+7523780 | MS.gene36531:CDS |
| CGTTCAAGGGGAAGTGGTGC+TGG | 0.428010 | 7.1:+7523119 | MS.gene36531:CDS |
| AGGATCAGAAGTGTCTAAAC+AGG | 0.429136 | 7.1:-7523972 | None:intergenic |
| TATCTGTCTGCATTTCTGAT+TGG | 0.429274 | 7.1:+7523576 | MS.gene36531:CDS |
| TTGATGGGAGAGTCGATTGT+TGG | 0.429521 | 7.1:-7522433 | None:intergenic |
| GATTATCAAGTATTTCTTGA+TGG | 0.431485 | 7.1:-7522449 | None:intergenic |
| GCAGTTCTATAACGTCGTTT+TGG | 0.441463 | 7.1:-7523158 | None:intergenic |
| TTAGTGGGCGATCCAGAATC+AGG | 0.442864 | 7.1:-7522531 | None:intergenic |
| GCATTTACTATTTCATAGCT+GGG | 0.443288 | 7.1:-7522825 | None:intergenic |
| TGATGGGAGAGTCGATTGTT+GGG | 0.444183 | 7.1:-7522432 | None:intergenic |
| TCTAAACTACGCAGAAGAGC+TGG | 0.446568 | 7.1:-7523068 | None:intergenic |
| TAGCTACTTCACCTTCTTCA+AGG | 0.447217 | 7.1:-7521798 | None:intergenic |
| TATACTCTTGCAAGTGATTG+TGG | 0.448299 | 7.1:-7522602 | None:intergenic |
| GTGACCTTTAATACTATTCA+AGG | 0.449805 | 7.1:+7523326 | MS.gene36531:CDS |
| AGACATTACCACCTCACTGC+TGG | 0.450481 | 7.1:-7522202 | None:intergenic |
| CTTCATATACCCCGCGTTCA+AGG | 0.452616 | 7.1:+7523105 | MS.gene36531:CDS |
| AGCACTGGCTCAAAAGTTGC+TGG | 0.453968 | 7.1:+7523005 | MS.gene36531:CDS |
| CAACCTAATACATCAAAGTC+TGG | 0.454049 | 7.1:-7524592 | None:intergenic |
| TCGTATGGAGATTATCAAAC+TGG | 0.454668 | 7.1:-7522473 | None:intergenic |
| CTTCACATGGTTGAGCATCC+AGG | 0.454995 | 7.1:+7523260 | MS.gene36531:CDS |
| AGACTTTGATGCCTATATCA+TGG | 0.456599 | 7.1:+7524501 | MS.gene36531:CDS |
| GAGTCTGTCATGCATGAAGC+AGG | 0.461736 | 7.1:+7522276 | MS.gene36531:CDS |
| GGTAGAAGTTTCCATGATAT+AGG | 0.462285 | 7.1:-7524512 | None:intergenic |
| ATGTTGTATTCCATTTGGTT+TGG | 0.463820 | 7.1:-7523907 | None:intergenic |
| ATACTCTTGCAAGTGATTGT+GGG | 0.471591 | 7.1:-7522601 | None:intergenic |
| CTCAACCTAGCAACGACAAT+CGG | 0.471720 | 7.1:+7521860 | MS.gene36531:CDS |
| ATTATCAAGTATTTCTTGAT+GGG | 0.473301 | 7.1:-7522448 | None:intergenic |
| CACCACTTCCCCTTGAACGC+GGG | 0.473616 | 7.1:-7523115 | None:intergenic |
| GTCATAGTGAGTCATCATTT+GGG | 0.474020 | 7.1:-7522721 | None:intergenic |
| ACAAGCGCGGTCAAAGATTC+GGG | 0.475182 | 7.1:-7524811 | None:intergenic |
| TGCCACAGGTTCAGAGTTAG+TGG | 0.475718 | 7.1:-7522547 | None:intergenic |
| TCAGGAAGTGGTTCAGGTGG+AGG | 0.477445 | 7.1:-7522513 | None:intergenic |
| AGTGTTGCCTCCAAATCAAT+TGG | 0.477467 | 7.1:-7521883 | None:intergenic |
| ACAAGTGCCTCCACTGTCTC+CGG | 0.478247 | 7.1:-7524757 | None:intergenic |
| ACATCAAAGTCTGGAACTCT+AGG | 0.485617 | 7.1:-7524583 | None:intergenic |
| CTGATTGGAATTTGGAAGGT+AGG | 0.486782 | 7.1:+7523591 | MS.gene36531:CDS |
| TTTAGTAAGGTCGCTAATGA+AGG | 0.489500 | 7.1:-7524179 | None:intergenic |
| CAGACTTTGATGTATTAGGT+TGG | 0.489968 | 7.1:+7524593 | MS.gene36531:CDS |
| CGTTGCTGAGTGGTGCCTCA+GGG | 0.492412 | 7.1:-7521954 | None:intergenic |
| AACATGCCCTTCTACATTCA+GGG | 0.492565 | 7.1:-7522953 | None:intergenic |
| CGGGCCATCTTGGAGAGTGT+GGG | 0.494350 | 7.1:-7524640 | None:intergenic |
| TTGTTCAAAATCTGCAACCT+CGG | 0.494820 | 7.1:+7523294 | MS.gene36531:CDS |
| TCGGGCCATCTTGGAGAGTG+TGG | 0.496830 | 7.1:-7524641 | None:intergenic |
| ATGCATGACAGACTCAGTGC+TGG | 0.497898 | 7.1:-7522268 | None:intergenic |
| CAATCGGCCAATTGATTTGG+AGG | 0.499034 | 7.1:+7521876 | MS.gene36531:CDS |
| ATGAAAGAATGTAATAGCAG+TGG | 0.500974 | 7.1:-7524104 | None:intergenic |
| GCCAAAGACTGGATGCAGTA+TGG | 0.501851 | 7.1:+7524784 | MS.gene36531:CDS |
| TCTTGATCAATAATTATGTA+AGG | 0.502466 | 7.1:-7523188 | None:intergenic |
| ATGCAACATTGCTTAAAGTA+CGG | 0.503617 | 7.1:-7523736 | None:intergenic |
| TTCATATACCCCGCGTTCAA+GGG | 0.504831 | 7.1:+7523106 | MS.gene36531:CDS |
| TCAAGGGCAACTTTAGAAAG+TGG | 0.506194 | 7.1:-7523638 | None:intergenic |
| CTTAAACGGCACATTGCAAA+GGG | 0.506564 | 7.1:+7523038 | MS.gene36531:CDS |
| GTTTCCAGTCTTGAATAGAT+GGG | 0.511222 | 7.1:-7524009 | None:intergenic |
| GCTGGGCTGTGCTTCAGACA+TGG | 0.513422 | 7.1:-7522184 | None:intergenic |
| TGCAACATTGCTTAAAGTAC+GGG | 0.515335 | 7.1:-7523735 | None:intergenic |
| CAATTCAGACTTTGTCTGAT+GGG | 0.517662 | 7.1:-7524533 | None:intergenic |
| AACATATCAAATGTTGGTTG+CGG | 0.520587 | 7.1:+7523925 | MS.gene36531:CDS |
| GTATCGAAGTTCCTTGCGTC+CGG | 0.520893 | 7.1:+7524738 | MS.gene36531:CDS |
| GGAACACTTTACCATAGAAA+CGG | 0.526637 | 7.1:+7522926 | MS.gene36531:CDS |
| TTATTGATGACCAAACCAAA+TGG | 0.526661 | 7.1:+7523897 | MS.gene36531:CDS |
| TGCTGGAAGCAATATAAAGA+TGG | 0.526869 | 7.1:+7524435 | MS.gene36531:CDS |
| TGATGGTCCAAATGACTGTT+GGG | 0.527887 | 7.1:-7522633 | None:intergenic |
| CCAATTCAGACTTTGTCTGA+TGG | 0.528198 | 7.1:-7524534 | None:intergenic |
| GTAGGTTATGTATTTATCAC+GGG | 0.529010 | 7.1:+7523458 | MS.gene36531:CDS |
| AACTGACCATCGAAGATAAG+TGG | 0.529244 | 7.1:-7523692 | None:intergenic |
| GCGTCATGACTGTCTGCCAC+AGG | 0.529255 | 7.1:-7522561 | None:intergenic |
| ATGATGACTCACTATGACCT+GGG | 0.530285 | 7.1:+7522726 | MS.gene36531:CDS |
| TATGTCAAGATTGTTGATGA+TGG | 0.530406 | 7.1:+7524340 | MS.gene36531:CDS |
| ACCCCGCGTTCAAGGGGAAG+TGG | 0.530632 | 7.1:+7523113 | MS.gene36531:CDS |
| TGTAGGTTATGTATTTATCA+CGG | 0.531395 | 7.1:+7523457 | MS.gene36531:CDS |
| ACTTTGATGTATTAGGTTGG+TGG | 0.532207 | 7.1:+7524596 | MS.gene36531:CDS |
| TATGCAGAAGAAGGATATGC+TGG | 0.532839 | 7.1:+7524418 | MS.gene36531:CDS |
| GACATTACCACCTCACTGCT+GGG | 0.534527 | 7.1:-7522201 | None:intergenic |
| GTAGATATTCAGAAGTCGTA+TGG | 0.535855 | 7.1:-7522488 | None:intergenic |
| TCCTCGTTTCAAGATGAAGC+TGG | 0.535948 | 7.1:+7524273 | MS.gene36531:CDS |
| ATAGTGATTGGAAGTTGCAG+AGG | 0.537321 | 7.1:+7523492 | MS.gene36531:CDS |
| CTGGAATACACAATATGTCT+CGG | 0.537366 | 7.1:-7524660 | None:intergenic |
| GTACTGGAGAGATTCTAGTC+TGG | 0.539158 | 7.1:+7524225 | MS.gene36531:CDS |
| CTCCACTGTCTCCGGACGCA+AGG | 0.539572 | 7.1:-7524749 | None:intergenic |
| GAATACAACATATCAAATGT+TGG | 0.540376 | 7.1:+7523919 | MS.gene36531:CDS |
| GAACCCCATCTATTCAAGAC+TGG | 0.542220 | 7.1:+7524005 | MS.gene36531:CDS |
| ATTGGCCGATTGTCGTTGCT+AGG | 0.543721 | 7.1:-7521865 | None:intergenic |
| CCGGTGTTAGTGGCAGAGGA+AGG | 0.544115 | 7.1:-7524393 | None:intergenic |
| TGCTCGAGCTGTTACAAATG+AGG | 0.547895 | 7.1:+7524153 | MS.gene36531:CDS |
| TGGATGCTCAACCATGTGAA+GGG | 0.548561 | 7.1:-7523258 | None:intergenic |
| TATGCCGGTGTTAGTGGCAG+AGG | 0.549555 | 7.1:-7524397 | None:intergenic |
| AAACGACGTTATAGAACTGC+TGG | 0.553739 | 7.1:+7523161 | MS.gene36531:CDS |
| GCAGAGTCAGAATCAGGGTA+TGG | 0.555458 | 7.1:-7523539 | None:intergenic |
| TTTCGGAGTTAGCCAACTGA+TGG | 0.556659 | 7.1:-7522671 | None:intergenic |
| GTTGTCGTCATGAGATTGCT+AGG | 0.559521 | 7.1:+7523213 | MS.gene36531:CDS |
| CAACGACGTGGTCGATTCTG+AGG | 0.559930 | 7.1:+7521972 | MS.gene36531:CDS |
| TTTGGACCATCATGAGGCAC+TGG | 0.560763 | 7.1:+7522644 | MS.gene36531:CDS |
| AATGTGCCGTTTAAGGTGGC+TGG | 0.561742 | 7.1:-7523030 | None:intergenic |
| AGGCATTGTCAATAAAATAC+GGG | 0.562489 | 7.1:+7523781 | MS.gene36531:CDS |
| AAGAATCCACTTATCTTCGA+TGG | 0.563589 | 7.1:+7523686 | MS.gene36531:CDS |
| GGCGATCCAGAATCAGGAAG+TGG | 0.565225 | 7.1:-7522525 | None:intergenic |
| CTAAACTACGCAGAAGAGCT+GGG | 0.566020 | 7.1:-7523067 | None:intergenic |
| TGAAAGAATGTAATAGCAGT+GGG | 0.566230 | 7.1:-7524103 | None:intergenic |
| TGGAATACACAATATGTCTC+GGG | 0.568137 | 7.1:-7524659 | None:intergenic |
| AGCTACTTCACCTTCTTCAA+GGG | 0.568719 | 7.1:-7521797 | None:intergenic |
| ATGATGGTCCAAATGACTGT+TGG | 0.569458 | 7.1:-7522634 | None:intergenic |
| AATGTCAGACCAACACGTCC+CGG | 0.570053 | 7.1:-7523410 | None:intergenic |
| TTCCTTGCGTCCGGAGACAG+TGG | 0.570149 | 7.1:+7524747 | MS.gene36531:CDS |
| CCTTAAACGGCACATTGCAA+AGG | 0.570466 | 7.1:+7523037 | MS.gene36531:CDS |
| GGGACGTGTTGGTCTGACAT+TGG | 0.572050 | 7.1:+7523412 | MS.gene36531:CDS |
| TACATGACTACATCGTTGTT+AGG | 0.574408 | 7.1:-7522333 | None:intergenic |
| TATCCTTCTTCTGCATATGC+CGG | 0.574601 | 7.1:-7524412 | None:intergenic |
| AGACACAGCCAAGTAAGAAG+AGG | 0.574704 | 7.1:+7522883 | MS.gene36531:CDS |
| GGAGTTAGCCAACTGATGGT+TGG | 0.576091 | 7.1:-7522667 | None:intergenic |
| GGTTGGCCAGTGCCTCATGA+TGG | 0.577183 | 7.1:-7522650 | None:intergenic |
| GAAGTGTTTCACTATTCCCC+AGG | 0.577656 | 7.1:-7522743 | None:intergenic |
| ACACCGGCATATGCAGAAGA+AGG | 0.577680 | 7.1:+7524409 | MS.gene36531:CDS |
| GAGACTTCTCAATGTTGTGA+TGG | 0.579148 | 7.1:+7523514 | MS.gene36531:CDS |
| GGAAGCAATATAAAGATGGA+AGG | 0.582675 | 7.1:+7524439 | MS.gene36531:CDS |
| AATGATGACTCACTATGACC+TGG | 0.583281 | 7.1:+7522725 | MS.gene36531:CDS |
| CTGGATGCTCAACCATGTGA+AGG | 0.584734 | 7.1:-7523259 | None:intergenic |
| GCACCACTTCCCCTTGAACG+CGG | 0.586425 | 7.1:-7523116 | None:intergenic |
| TACTCTTGCAAGTGATTGTG+GGG | 0.586752 | 7.1:-7522600 | None:intergenic |
| AGGATGGCTACCCTTGAAGA+AGG | 0.589103 | 7.1:+7521787 | None:intergenic |
| GATGAATTACCGGGACGTGT+TGG | 0.589739 | 7.1:+7523401 | MS.gene36531:CDS |
| ACCACTTCCCCTTGAACGCG+GGG | 0.590385 | 7.1:-7523114 | None:intergenic |
| TTTCCAGTCTTGAATAGATG+GGG | 0.595690 | 7.1:-7524008 | None:intergenic |
| ATTTCTGATTGGAATTTGGA+AGG | 0.597326 | 7.1:+7523587 | MS.gene36531:CDS |
| GGCAACACTTGACACGCCGA+TGG | 0.599069 | 7.1:+7521897 | MS.gene36531:CDS |
| ATGTAGAAGGGCATGTTGCA+AGG | 0.599805 | 7.1:+7522959 | MS.gene36531:CDS |
| GGTTGCGGCTTCTGAACTGA+AGG | 0.600921 | 7.1:+7523940 | MS.gene36531:CDS |
| GGCACTGGCCAACCATCAGT+TGG | 0.601123 | 7.1:+7522659 | MS.gene36531:CDS |
| TTATCAAAGATAGAGTCAGA+AGG | 0.601438 | 7.1:-7524694 | None:intergenic |
| TCATATACCCCGCGTTCAAG+GGG | 0.602278 | 7.1:+7523107 | MS.gene36531:CDS |
| GTACCCCACACTCTCCAAGA+TGG | 0.606832 | 7.1:+7524636 | MS.gene36531:CDS |
| CGGTGTTAGTGGCAGAGGAA+GGG | 0.608414 | 7.1:-7524392 | None:intergenic |
| AGATCCTCTGCACATACTTG+AGG | 0.610260 | 7.1:+7524038 | MS.gene36531:CDS |
| TTGGTCTGACATTGGATATG+TGG | 0.610489 | 7.1:+7523420 | MS.gene36531:CDS |
| GTGAAACACTTCACGACAGT+CGG | 0.610653 | 7.1:+7522754 | MS.gene36531:CDS |
| ACCACATTGCAATGATGAAG+TGG | 0.611959 | 7.1:+7522161 | MS.gene36531:CDS |
| TTCTCAAGCACACTATGAGA+TGG | 0.612569 | 7.1:+7522785 | MS.gene36531:CDS |
| TTAGTAAGGTCGCTAATGAA+GGG | 0.612882 | 7.1:-7524178 | None:intergenic |
| CCTTCCTCTGCCACTAACAC+CGG | 0.618365 | 7.1:+7524393 | MS.gene36531:CDS |
| GAATCAGGAAGTGGTTCAGG+TGG | 0.620517 | 7.1:-7522516 | None:intergenic |
| CTTACTTGGCTGTGTCTCTG+GGG | 0.622580 | 7.1:-7522877 | None:intergenic |
| TTGCAATGTGCCGTTTAAGG+TGG | 0.623373 | 7.1:-7523034 | None:intergenic |
| TGGACCTCAAGTCAATCTGT+AGG | 0.630778 | 7.1:+7523440 | MS.gene36531:CDS |
| GGATGCTCAACCATGTGAAG+GGG | 0.631155 | 7.1:-7523257 | None:intergenic |
| AGCACAGCCCAGCAGTGAGG+TGG | 0.632849 | 7.1:+7522194 | MS.gene36531:CDS |
| TGAGAGCAGAGTCAGAATCA+GGG | 0.633209 | 7.1:-7523544 | None:intergenic |
| CATTTACTATTTCATAGCTG+GGG | 0.633853 | 7.1:-7522824 | None:intergenic |
| CTTGCGTCCGGAGACAGTGG+AGG | 0.634824 | 7.1:+7524750 | MS.gene36531:CDS |
| GGATTCTTCACAGAGAGTAG+AGG | 0.636348 | 7.1:-7523671 | None:intergenic |
| TGAATTAGCCAATTTAACAG+TGG | 0.636617 | 7.1:+7522407 | MS.gene36531:CDS |
| CGGACAATAGTCTCATCAGT+GGG | 0.637526 | 7.1:-7522102 | None:intergenic |
| GCCCACTAACTCTGAACCTG+TGG | 0.638843 | 7.1:+7522545 | MS.gene36531:CDS |
| CAGTCATTTGGACCATCATG+AGG | 0.639756 | 7.1:+7522638 | MS.gene36531:CDS |
| TCTGCAACCTCGGTTCAACA+TGG | 0.640956 | 7.1:+7523304 | MS.gene36531:CDS |
| TGCATGACAGACTCAGTGCT+GGG | 0.641522 | 7.1:-7522267 | None:intergenic |
| AGTCTGTCATGCATGAAGCA+GGG | 0.641730 | 7.1:+7522277 | MS.gene36531:CDS |
| GGCACAAATCAGCAATGATG+TGG | 0.644274 | 7.1:+7522359 | MS.gene36531:CDS |
| ATGTTTGCTGCATCATAAAG+GGG | 0.644876 | 7.1:-7524061 | None:intergenic |
| TTGTGTCGCAACTTACCTGA+CGG | 0.645729 | 7.1:+7523352 | MS.gene36531:CDS |
| GGTTAGCCCTGAATGTAGAA+GGG | 0.648139 | 7.1:+7522947 | MS.gene36531:CDS |
| GTTGCTGAGTGGTGCCTCAG+GGG | 0.658032 | 7.1:-7521953 | None:intergenic |
| GCCACAGGTTCAGAGTTAGT+GGG | 0.658075 | 7.1:-7522546 | None:intergenic |
| GGGCCATCTTGGAGAGTGTG+GGG | 0.658293 | 7.1:-7524639 | None:intergenic |
| GATGCTCAACCATGTGAAGG+GGG | 0.658296 | 7.1:-7523256 | None:intergenic |
| AAATGCAGACAGATACAGCA+TGG | 0.665432 | 7.1:-7523568 | None:intergenic |
| ACTTCTGATCCTGATTACAA+AGG | 0.667473 | 7.1:+7523983 | MS.gene36531:CDS |
| AAAACAGCACAACAATGAGA+GGG | 0.668751 | 7.1:+7522059 | MS.gene36531:CDS |
| GGCATCACCAAACAATGGTG+TGG | 0.673321 | 7.1:+7521993 | MS.gene36531:CDS |
| CTCACATCAGAGCAATGAGG+TGG | 0.675090 | 7.1:+7522227 | MS.gene36531:CDS |
| GATTTGTTGAGCTCAACACA+AGG | 0.678502 | 7.1:+7523761 | MS.gene36531:CDS |
| TCGACCACGTCGTTGCTGAG+TGG | 0.678710 | 7.1:-7521964 | None:intergenic |
| AGCAGAGCACAACAATGAGG+AGG | 0.679176 | 7.1:+7522128 | MS.gene36531:CDS |
| GCCACTTCATCATTGCAATG+TGG | 0.681169 | 7.1:-7522162 | None:intergenic |
| TGATGACTCACTATGACCTG+GGG | 0.681855 | 7.1:+7522727 | MS.gene36531:CDS |
| ACCAGCTTCATCTTGAAACG+AGG | 0.681908 | 7.1:-7524274 | None:intergenic |
| AAGGTCACCATGTTGAACCG+AGG | 0.682871 | 7.1:-7523311 | None:intergenic |
| TGAAGCAGAGCACAACAATG+AGG | 0.683065 | 7.1:+7522125 | MS.gene36531:CDS |
| GGCACCACTCAGCAACGACG+TGG | 0.686707 | 7.1:+7521960 | MS.gene36531:CDS |
| TCTGAGGCATCACCAAACAA+TGG | 0.686789 | 7.1:+7521988 | MS.gene36531:CDS |
| CAACGATGTAGTCATGTACG+AGG | 0.687852 | 7.1:+7522338 | MS.gene36531:CDS |
| GGGGCCTCAAGTATGTGCAG+AGG | 0.691005 | 7.1:-7524042 | None:intergenic |
| ATAACCTACAGATTGACTTG+AGG | 0.692419 | 7.1:-7523444 | None:intergenic |
| ACGGACAATAGTCTCATCAG+TGG | 0.700131 | 7.1:-7522103 | None:intergenic |
| TGACTCACATCAGAGCAATG+AGG | 0.706489 | 7.1:+7522224 | MS.gene36531:CDS |
| TTTCACCAAAATATACGGTG+AGG | 0.714858 | 7.1:+7524306 | MS.gene36531:CDS |
| AATGCAGACAAGTAATGATG+TGG | 0.715499 | 7.1:+7522026 | MS.gene36531:CDS |
| GAAGACTTCAGAATCACATG+AGG | 0.716904 | 7.1:+7523820 | MS.gene36531:CDS |
| TGAAGCACAGCCCAGCAGTG+AGG | 0.717469 | 7.1:+7522191 | MS.gene36531:CDS |
| TGACAAGAAGTCTACCCCTG+AGG | 0.756791 | 7.1:+7521939 | MS.gene36531:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTCATCAAAATATTTCATA+AGG | - | chr7.1:7523388-7523407 | None:intergenic | 15.0% |
| !! | ATGAAAAAATTGATAAGTAC+TGG | + | chr7.1:7524209-7524228 | MS.gene36531:CDS | 20.0% |
| !! | ATTATCAAGTATTTCTTGAT+GGG | - | chr7.1:7522451-7522470 | None:intergenic | 20.0% |
| !! | TCTTGATCAATAATTATGTA+AGG | - | chr7.1:7523191-7523210 | None:intergenic | 20.0% |
| !!! | AAATATTTTGATGAATTACC+GGG | + | chr7.1:7523392-7523411 | MS.gene36531:CDS | 20.0% |
| !!! | GAAATATTTTGATGAATTAC+CGG | + | chr7.1:7523391-7523410 | MS.gene36531:CDS | 20.0% |
| !!! | TTATCAATTTTTTCATGCAT+AGG | - | chr7.1:7524205-7524224 | None:intergenic | 20.0% |
| ! | ATCTCCTTGAATAGTATTAA+AGG | - | chr7.1:7523333-7523352 | None:intergenic | 25.0% |
| ! | GAAAAAAAAGTCTATAGTCT+GGG | + | chr7.1:7522905-7522924 | MS.gene36531:CDS | 25.0% |
| ! | GAATACAACATATCAAATGT+TGG | + | chr7.1:7523919-7523938 | MS.gene36531:CDS | 25.0% |
| ! | GATGTAAAAAACAAGCTAAA+CGG | + | chr7.1:7521829-7521848 | MS.gene36531:CDS | 25.0% |
| ! | GATTATCAAGTATTTCTTGA+TGG | - | chr7.1:7522452-7522471 | None:intergenic | 25.0% |
| ! | TGAAGTTTGGAAATTACATT+TGG | + | chr7.1:7524126-7524145 | MS.gene36531:CDS | 25.0% |
| ! | TGTAGGTTATGTATTTATCA+CGG | + | chr7.1:7523457-7523476 | MS.gene36531:CDS | 25.0% |
| ! | TTACATTCTTTCATGAAGTT+TGG | + | chr7.1:7524113-7524132 | MS.gene36531:CDS | 25.0% |
| ! | TTCAGTTTCACCAAAATATA+CGG | + | chr7.1:7524301-7524320 | MS.gene36531:CDS | 25.0% |
| ! | TTGATATGTTGTATTCCATT+TGG | - | chr7.1:7523915-7523934 | None:intergenic | 25.0% |
| !!! | AAGGCATTGTCAATAAAATA+CGG | + | chr7.1:7523780-7523799 | MS.gene36531:CDS | 25.0% |
| !!! | TTAGCTTGTTTTTTACATCA+GGG | - | chr7.1:7521828-7521847 | None:intergenic | 25.0% |
| !!! | TTTAGCTTGTTTTTTACATC+AGG | - | chr7.1:7521829-7521848 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCCTCTTCTTACT+TGG | - | chr7.1:7522894-7522913 | None:intergenic | 25.0% |
| AAATTGGCTAATTCATTCTC+AGG | - | chr7.1:7522402-7522421 | None:intergenic | 30.0% | |
| AAGTAATGATGTGGTTGAAT+TGG | + | chr7.1:7522035-7522054 | MS.gene36531:CDS | 30.0% | |
| AGCATTTACTATTTCATAGC+TGG | - | chr7.1:7522829-7522848 | None:intergenic | 30.0% | |
| ATGAAAGAATGTAATAGCAG+TGG | - | chr7.1:7524107-7524126 | None:intergenic | 30.0% | |
| ATGCAACATTGCTTAAAGTA+CGG | - | chr7.1:7523739-7523758 | None:intergenic | 30.0% | |
| ATGTTGTATTCCATTTGGTT+TGG | - | chr7.1:7523910-7523929 | None:intergenic | 30.0% | |
| ATTTCTGATTGGAATTTGGA+AGG | + | chr7.1:7523587-7523606 | MS.gene36531:CDS | 30.0% | |
| CATTTACTATTTCATAGCTG+GGG | - | chr7.1:7522827-7522846 | None:intergenic | 30.0% | |
| GCATTTACTATTTCATAGCT+GGG | - | chr7.1:7522828-7522847 | None:intergenic | 30.0% | |
| GGAAAAAAAAGTCTATAGTC+TGG | + | chr7.1:7522904-7522923 | MS.gene36531:CDS | 30.0% | |
| GTAGGTTATGTATTTATCAC+GGG | + | chr7.1:7523458-7523477 | MS.gene36531:CDS | 30.0% | |
| GTGACCTTTAATACTATTCA+AGG | + | chr7.1:7523326-7523345 | MS.gene36531:CDS | 30.0% | |
| TGAAAGAATGTAATAGCAGT+GGG | - | chr7.1:7524106-7524125 | None:intergenic | 30.0% | |
| TGAATTAGCCAATTTAACAG+TGG | + | chr7.1:7522407-7522426 | MS.gene36531:CDS | 30.0% | |
| TGATAAAAAGAGCAAAGAGA+TGG | + | chr7.1:7524711-7524730 | MS.gene36531:CDS | 30.0% | |
| TTATCAAAGATAGAGTCAGA+AGG | - | chr7.1:7524697-7524716 | None:intergenic | 30.0% | |
| TTTCATGCATAGGTTTAGTA+AGG | - | chr7.1:7524195-7524214 | None:intergenic | 30.0% | |
| ! | AACATATCAAATGTTGGTTG+CGG | + | chr7.1:7523925-7523944 | MS.gene36531:CDS | 30.0% |
| ! | AATAAAAAGGCTCTTTTCAC+TGG | - | chr7.1:7523882-7523901 | None:intergenic | 30.0% |
| ! | AATGTTTGCTGCATCATAAA+GGG | - | chr7.1:7524065-7524084 | None:intergenic | 30.0% |
| ! | AGAACTTTGTTGTCAGATAA+TGG | + | chr7.1:7524472-7524491 | MS.gene36531:CDS | 30.0% |
| ! | AGGCATTGTCAATAAAATAC+GGG | + | chr7.1:7523781-7523800 | MS.gene36531:CDS | 30.0% |
| ! | ATAAAAAGGCTCTTTTCACT+GGG | - | chr7.1:7523881-7523900 | None:intergenic | 30.0% |
| ! | TATGTCAAGATTGTTGATGA+TGG | + | chr7.1:7524340-7524359 | MS.gene36531:CDS | 30.0% |
| ! | TTATTGATGACCAAACCAAA+TGG | + | chr7.1:7523897-7523916 | MS.gene36531:CDS | 30.0% |
| !! | TGGTTTGGTCATCAATAAAA+AGG | - | chr7.1:7523895-7523914 | None:intergenic | 30.0% |
| !!! | GACATTTTGTTGATAGTGAT+TGG | + | chr7.1:7523480-7523499 | MS.gene36531:CDS | 30.0% |
| !!! | TAGCTTGTTTTTTACATCAG+GGG | - | chr7.1:7521827-7521846 | None:intergenic | 30.0% |
| AAAAACAGCACAACAATGAG+AGG | + | chr7.1:7522058-7522077 | MS.gene36531:CDS | 35.0% | |
| AAAACAGCACAACAATGAGA+GGG | + | chr7.1:7522059-7522078 | MS.gene36531:CDS | 35.0% | |
| AAGAATCCACTTATCTTCGA+TGG | + | chr7.1:7523686-7523705 | MS.gene36531:CDS | 35.0% | |
| AATGCAGACAAGTAATGATG+TGG | + | chr7.1:7522026-7522045 | MS.gene36531:CDS | 35.0% | |
| ACTTCTGATCCTGATTACAA+AGG | + | chr7.1:7523983-7524002 | MS.gene36531:CDS | 35.0% | |
| AGACTTTGATGCCTATATCA+TGG | + | chr7.1:7524501-7524520 | MS.gene36531:CDS | 35.0% | |
| AGTTTCCAGTCTTGAATAGA+TGG | - | chr7.1:7524013-7524032 | None:intergenic | 35.0% | |
| ATAAAGATGGAAGGATCTTC+TGG | + | chr7.1:7524448-7524467 | MS.gene36531:CDS | 35.0% | |
| ATACTCTTGCAAGTGATTGT+GGG | - | chr7.1:7522604-7522623 | None:intergenic | 35.0% | |
| CAACCTAATACATCAAAGTC+TGG | - | chr7.1:7524595-7524614 | None:intergenic | 35.0% | |
| CAATTCAGACTTTGTCTGAT+GGG | - | chr7.1:7524536-7524555 | None:intergenic | 35.0% | |
| CAGACTTTGATGTATTAGGT+TGG | + | chr7.1:7524593-7524612 | MS.gene36531:CDS | 35.0% | |
| CTGCATTTCTGATTGGAATT+TGG | + | chr7.1:7523583-7523602 | MS.gene36531:CDS | 35.0% | |
| CTGGAATACACAATATGTCT+CGG | - | chr7.1:7524663-7524682 | None:intergenic | 35.0% | |
| GGAACACTTTACCATAGAAA+CGG | + | chr7.1:7522926-7522945 | MS.gene36531:CDS | 35.0% | |
| GGAAGCAATATAAAGATGGA+AGG | + | chr7.1:7524439-7524458 | MS.gene36531:CDS | 35.0% | |
| GGTAGAAGTTTCCATGATAT+AGG | - | chr7.1:7524515-7524534 | None:intergenic | 35.0% | |
| GTAGATATTCAGAAGTCGTA+TGG | - | chr7.1:7522491-7522510 | None:intergenic | 35.0% | |
| GTCATAGTGAGTCATCATTT+GGG | - | chr7.1:7522724-7522743 | None:intergenic | 35.0% | |
| GTTCCAGACTTTGATGTATT+AGG | + | chr7.1:7524589-7524608 | MS.gene36531:CDS | 35.0% | |
| GTTTCCAGTCTTGAATAGAT+GGG | - | chr7.1:7524012-7524031 | None:intergenic | 35.0% | |
| TACATGACTACATCGTTGTT+AGG | - | chr7.1:7522336-7522355 | None:intergenic | 35.0% | |
| TATACTCTTGCAAGTGATTG+TGG | - | chr7.1:7522605-7522624 | None:intergenic | 35.0% | |
| TATCTGTCTGCATTTCTGAT+TGG | + | chr7.1:7523576-7523595 | MS.gene36531:CDS | 35.0% | |
| TCGTATGGAGATTATCAAAC+TGG | - | chr7.1:7522476-7522495 | None:intergenic | 35.0% | |
| TGAACAAATGCAACAAATCC+TGG | - | chr7.1:7523281-7523300 | None:intergenic | 35.0% | |
| TGCAACATTGCTTAAAGTAC+GGG | - | chr7.1:7523738-7523757 | None:intergenic | 35.0% | |
| TGCTGGAAGCAATATAAAGA+TGG | + | chr7.1:7524435-7524454 | MS.gene36531:CDS | 35.0% | |
| TGGAATACACAATATGTCTC+GGG | - | chr7.1:7524662-7524681 | None:intergenic | 35.0% | |
| TTAGTAAGGTCGCTAATGAA+GGG | - | chr7.1:7524181-7524200 | None:intergenic | 35.0% | |
| TTGTTCAAAATCTGCAACCT+CGG | + | chr7.1:7523294-7523313 | MS.gene36531:CDS | 35.0% | |
| TTTAGTAAGGTCGCTAATGA+AGG | - | chr7.1:7524182-7524201 | None:intergenic | 35.0% | |
| TTTCACCAAAATATACGGTG+AGG | + | chr7.1:7524306-7524325 | MS.gene36531:CDS | 35.0% | |
| TTTCCAGTCTTGAATAGATG+GGG | - | chr7.1:7524011-7524030 | None:intergenic | 35.0% | |
| ! | ATGTTTGCTGCATCATAAAG+GGG | - | chr7.1:7524064-7524083 | None:intergenic | 35.0% |
| ! | GAATGTTTGCTGCATCATAA+AGG | - | chr7.1:7524066-7524085 | None:intergenic | 35.0% |
| ! | GTATATGAAGCATGCTGATT+AGG | - | chr7.1:7523095-7523114 | None:intergenic | 35.0% |
| ! | TTTGGTGATTGCTGTAGTTA+TGG | + | chr7.1:7524249-7524268 | MS.gene36531:CDS | 35.0% |
| !! | ACTTTGATGTATTAGGTTGG+TGG | + | chr7.1:7524596-7524615 | MS.gene36531:CDS | 35.0% |
| !! | ATAACCTACAGATTGACTTG+AGG | - | chr7.1:7523447-7523466 | None:intergenic | 35.0% |
| !! | TAGAGGTCTGAGATTTTCAA+GGG | - | chr7.1:7523657-7523676 | None:intergenic | 35.0% |
| !!! | GTAGCTTTTGAGTTTTCCAT+CGG | - | chr7.1:7521916-7521935 | None:intergenic | 35.0% |
| AAACGACGTTATAGAACTGC+TGG | + | chr7.1:7523161-7523180 | MS.gene36531:CDS | 40.0% | |
| AAATGCAGACAGATACAGCA+TGG | - | chr7.1:7523571-7523590 | None:intergenic | 40.0% | |
| AACATGCCCTTCTACATTCA+GGG | - | chr7.1:7522956-7522975 | None:intergenic | 40.0% | |
| AACTGACCATCGAAGATAAG+TGG | - | chr7.1:7523695-7523714 | None:intergenic | 40.0% | |
| AATGATGACTCACTATGACC+TGG | + | chr7.1:7522725-7522744 | MS.gene36531:CDS | 40.0% | |
| ACCACATTGCAATGATGAAG+TGG | + | chr7.1:7522161-7522180 | MS.gene36531:CDS | 40.0% | |
| AGCTACTTCACCTTCTTCAA+GGG | - | chr7.1:7521800-7521819 | None:intergenic | 40.0% | |
| AGTGTTGCCTCCAAATCAAT+TGG | - | chr7.1:7521886-7521905 | None:intergenic | 40.0% | |
| ATAGTGATTGGAAGTTGCAG+AGG | + | chr7.1:7523492-7523511 | MS.gene36531:CDS | 40.0% | |
| ATGATGACTCACTATGACCT+GGG | + | chr7.1:7522726-7522745 | MS.gene36531:CDS | 40.0% | |
| ATGATGGTCCAAATGACTGT+TGG | - | chr7.1:7522637-7522656 | None:intergenic | 40.0% | |
| CCAATTCAGACTTTGTCTGA+TGG | - | chr7.1:7524537-7524556 | None:intergenic | 40.0% | |
| CCATCAGACAAAGTCTGAAT+TGG | + | chr7.1:7524534-7524553 | MS.gene36531:CDS | 40.0% | |
| CTGATTGGAATTTGGAAGGT+AGG | + | chr7.1:7523591-7523610 | MS.gene36531:CDS | 40.0% | |
| CTTAAACGGCACATTGCAAA+GGG | + | chr7.1:7523038-7523057 | MS.gene36531:CDS | 40.0% | |
| GAACTAACCACACCATTGTT+TGG | - | chr7.1:7522003-7522022 | None:intergenic | 40.0% | |
| GAAGACTTCAGAATCACATG+AGG | + | chr7.1:7523820-7523839 | MS.gene36531:CDS | 40.0% | |
| GAGACTTCTCAATGTTGTGA+TGG | + | chr7.1:7523514-7523533 | MS.gene36531:CDS | 40.0% | |
| GGTCATAGTGAGTCATCATT+TGG | - | chr7.1:7522725-7522744 | None:intergenic | 40.0% | |
| GTCTGAATTGGATCAGTATC+TGG | + | chr7.1:7524546-7524565 | MS.gene36531:CDS | 40.0% | |
| GTGAGTCATCATTTGGGAAT+TGG | - | chr7.1:7522718-7522737 | None:intergenic | 40.0% | |
| GTTGGGATCCACTGTTAAAT+TGG | - | chr7.1:7522418-7522437 | None:intergenic | 40.0% | |
| TACACATCCCAACAGTCATT+TGG | + | chr7.1:7522626-7522645 | MS.gene36531:CDS | 40.0% | |
| TACTCTTGCAAGTGATTGTG+GGG | - | chr7.1:7522603-7522622 | None:intergenic | 40.0% | |
| TAGCTACTTCACCTTCTTCA+AGG | - | chr7.1:7521801-7521820 | None:intergenic | 40.0% | |
| TATCCTTCTTCTGCATATGC+CGG | - | chr7.1:7524415-7524434 | None:intergenic | 40.0% | |
| TATGCAGAAGAAGGATATGC+TGG | + | chr7.1:7524418-7524437 | MS.gene36531:CDS | 40.0% | |
| TCAGAAGGAACAGTAGAAAC+TGG | - | chr7.1:7524682-7524701 | None:intergenic | 40.0% | |
| TGATGGTCCAAATGACTGTT+GGG | - | chr7.1:7522636-7522655 | None:intergenic | 40.0% | |
| TTCGATGGTCAGTTGCTAAT+TGG | + | chr7.1:7523701-7523720 | MS.gene36531:CDS | 40.0% | |
| TTCTCAAGCACACTATGAGA+TGG | + | chr7.1:7522785-7522804 | MS.gene36531:CDS | 40.0% | |
| TTGGTCTGACATTGGATATG+TGG | + | chr7.1:7523420-7523439 | MS.gene36531:CDS | 40.0% | |
| ! | ACATCAAAGTCTGGAACTCT+AGG | - | chr7.1:7524586-7524605 | None:intergenic | 40.0% |
| ! | AGCATCCTCACCGTATATTT+TGG | - | chr7.1:7524314-7524333 | None:intergenic | 40.0% |
| ! | GAATTCCATTTTCACAAGCG+CGG | - | chr7.1:7524827-7524846 | None:intergenic | 40.0% |
| ! | GCAGTTCTATAACGTCGTTT+TGG | - | chr7.1:7523161-7523180 | None:intergenic | 40.0% |
| ! | TCAAGGGCAACTTTAGAAAG+TGG | - | chr7.1:7523641-7523660 | None:intergenic | 40.0% |
| !! | AGGATCAGAAGTGTCTAAAC+AGG | - | chr7.1:7523975-7523994 | None:intergenic | 40.0% |
| !! | GATTTGTTGAGCTCAACACA+AGG | + | chr7.1:7523761-7523780 | MS.gene36531:CDS | 40.0% |
| !! | GTAGAGGTCTGAGATTTTCA+AGG | - | chr7.1:7523658-7523677 | None:intergenic | 40.0% |
| ACCAGCTTCATCTTGAAACG+AGG | - | chr7.1:7524277-7524296 | None:intergenic | 45.0% | |
| ACCATACTGCATCCAGTCTT+TGG | - | chr7.1:7524788-7524807 | None:intergenic | 45.0% | |
| ACGGACAATAGTCTCATCAG+TGG | - | chr7.1:7522106-7522125 | None:intergenic | 45.0% | |
| AGACACAGCCAAGTAAGAAG+AGG | + | chr7.1:7522883-7522902 | MS.gene36531:CDS | 45.0% | |
| AGATCCTCTGCACATACTTG+AGG | + | chr7.1:7524038-7524057 | MS.gene36531:CDS | 45.0% | |
| AGTCTGTCATGCATGAAGCA+GGG | + | chr7.1:7522277-7522296 | MS.gene36531:CDS | 45.0% | |
| CAACATGCCCTTCTACATTC+AGG | - | chr7.1:7522957-7522976 | None:intergenic | 45.0% | |
| CAACGATGTAGTCATGTACG+AGG | + | chr7.1:7522338-7522357 | MS.gene36531:CDS | 45.0% | |
| CACTTGTTTGTGCCAAAGAC+TGG | + | chr7.1:7524773-7524792 | MS.gene36531:CDS | 45.0% | |
| CAGTCATTTGGACCATCATG+AGG | + | chr7.1:7522638-7522657 | MS.gene36531:CDS | 45.0% | |
| CATTGTTGTGCTCTGCTTCA+CGG | - | chr7.1:7522125-7522144 | None:intergenic | 45.0% | |
| CCTTAAACGGCACATTGCAA+AGG | + | chr7.1:7523037-7523056 | MS.gene36531:CDS | 45.0% | |
| CGACAATCGGCCAATTGATT+TGG | + | chr7.1:7521873-7521892 | MS.gene36531:CDS | 45.0% | |
| CGGACAATAGTCTCATCAGT+GGG | - | chr7.1:7522105-7522124 | None:intergenic | 45.0% | |
| CTAAACTACGCAGAAGAGCT+GGG | - | chr7.1:7523070-7523089 | None:intergenic | 45.0% | |
| CTCAACCTAGCAACGACAAT+CGG | + | chr7.1:7521860-7521879 | MS.gene36531:CDS | 45.0% | |
| GAACCCCATCTATTCAAGAC+TGG | + | chr7.1:7524005-7524024 | MS.gene36531:CDS | 45.0% | |
| GAATCTTAAGCAGCACCTTC+AGG | + | chr7.1:7523853-7523872 | MS.gene36531:CDS | 45.0% | |
| GATGGGGTTCCTTTGTAATC+AGG | - | chr7.1:7523995-7524014 | None:intergenic | 45.0% | |
| GCCACTTCATCATTGCAATG+TGG | - | chr7.1:7522165-7522184 | None:intergenic | 45.0% | |
| GGATTCTTCACAGAGAGTAG+AGG | - | chr7.1:7523674-7523693 | None:intergenic | 45.0% | |
| GGCACAAATCAGCAATGATG+TGG | + | chr7.1:7522359-7522378 | MS.gene36531:CDS | 45.0% | |
| GGGGTATGTTCTTCATTGGT+TGG | - | chr7.1:7522861-7522880 | None:intergenic | 45.0% | |
| GTACTGGAGAGATTCTAGTC+TGG | + | chr7.1:7524225-7524244 | MS.gene36531:CDS | 45.0% | |
| GTGAAACACTTCACGACAGT+CGG | + | chr7.1:7522754-7522773 | MS.gene36531:CDS | 45.0% | |
| GTTGTCGTCATGAGATTGCT+AGG | + | chr7.1:7523213-7523232 | MS.gene36531:CDS | 45.0% | |
| TCCTCGTTTCAAGATGAAGC+TGG | + | chr7.1:7524273-7524292 | MS.gene36531:CDS | 45.0% | |
| TCTAAACTACGCAGAAGAGC+TGG | - | chr7.1:7523071-7523090 | None:intergenic | 45.0% | |
| TCTTACTTGGCTGTGTCTCT+GGG | - | chr7.1:7522881-7522900 | None:intergenic | 45.0% | |
| TGAAGCAGAGCACAACAATG+AGG | + | chr7.1:7522125-7522144 | MS.gene36531:CDS | 45.0% | |
| TGACTCACATCAGAGCAATG+AGG | + | chr7.1:7522224-7522243 | MS.gene36531:CDS | 45.0% | |
| TGAGAGCAGAGTCAGAATCA+GGG | - | chr7.1:7523547-7523566 | None:intergenic | 45.0% | |
| TGATGACTCACTATGACCTG+GGG | + | chr7.1:7522727-7522746 | MS.gene36531:CDS | 45.0% | |
| TGATGGGAGAGTCGATTGTT+GGG | - | chr7.1:7522435-7522454 | None:intergenic | 45.0% | |
| TGCAAGTGATTGTGGGGTAT+TGG | - | chr7.1:7522597-7522616 | None:intergenic | 45.0% | |
| TGCTCGAGCTGTTACAAATG+AGG | + | chr7.1:7524153-7524172 | MS.gene36531:CDS | 45.0% | |
| TGGACCTCAAGTCAATCTGT+AGG | + | chr7.1:7523440-7523459 | MS.gene36531:CDS | 45.0% | |
| TGGATGCTCAACCATGTGAA+GGG | - | chr7.1:7523261-7523280 | None:intergenic | 45.0% | |
| TTCAGGGCTAACCGTTTCTA+TGG | - | chr7.1:7522940-7522959 | None:intergenic | 45.0% | |
| TTCATATACCCCGCGTTCAA+GGG | + | chr7.1:7523106-7523125 | MS.gene36531:CDS | 45.0% | |
| TTCTTACTTGGCTGTGTCTC+TGG | - | chr7.1:7522882-7522901 | None:intergenic | 45.0% | |
| TTGATGGGAGAGTCGATTGT+TGG | - | chr7.1:7522436-7522455 | None:intergenic | 45.0% | |
| TTGTGTCGCAACTTACCTGA+CGG | + | chr7.1:7523352-7523371 | MS.gene36531:CDS | 45.0% | |
| TTTCGGAGTTAGCCAACTGA+TGG | - | chr7.1:7522674-7522693 | None:intergenic | 45.0% | |
| TTTGACCGCGCTTGTGAAAA+TGG | + | chr7.1:7524819-7524838 | MS.gene36531:CDS | 45.0% | |
| ! | AACTTTTGAGCCAGTGCTGT+AGG | - | chr7.1:7523003-7523022 | None:intergenic | 45.0% |
| ! | ATGTAGAAGGGCATGTTGCA+AGG | + | chr7.1:7522959-7522978 | MS.gene36531:CDS | 45.0% |
| ! | CAAACTTTTGCCTACAGCAC+TGG | + | chr7.1:7522990-7523009 | MS.gene36531:CDS | 45.0% |
| ! | GAAGTGTTTCACTATTCCCC+AGG | - | chr7.1:7522746-7522765 | None:intergenic | 45.0% |
| ! | GAGAGATTCTAGTCTGGCTT+TGG | + | chr7.1:7524231-7524250 | MS.gene36531:CDS | 45.0% |
| ! | GGTTAGCCCTGAATGTAGAA+GGG | + | chr7.1:7522947-7522966 | MS.gene36531:CDS | 45.0% |
| ! | TCTGAGGCATCACCAAACAA+TGG | + | chr7.1:7521988-7522007 | MS.gene36531:CDS | 45.0% |
| ! | TCTTTTCACTGGGAACCTGA+AGG | - | chr7.1:7523871-7523890 | None:intergenic | 45.0% |
| !! | CAATCGGCCAATTGATTTGG+AGG | + | chr7.1:7521876-7521895 | MS.gene36531:CDS | 45.0% |
| !! | CCTTTGCAATGTGCCGTTTA+AGG | - | chr7.1:7523040-7523059 | None:intergenic | 45.0% |
| !! | CTCTGGGGTATGTTCTTCAT+TGG | - | chr7.1:7522865-7522884 | None:intergenic | 45.0% |
| !! | GAAGGTGCTGCTTAAGATTC+AGG | - | chr7.1:7523853-7523872 | None:intergenic | 45.0% |
| !! | TTGCAATGTGCCGTTTAAGG+TGG | - | chr7.1:7523037-7523056 | None:intergenic | 45.0% |
| !!! | TAAGGCATTGCTTTTCCGTC+AGG | - | chr7.1:7523370-7523389 | None:intergenic | 45.0% |
| AAGGTCACCATGTTGAACCG+AGG | - | chr7.1:7523314-7523333 | None:intergenic | 50.0% | |
| AATGTCAGACCAACACGTCC+CGG | - | chr7.1:7523413-7523432 | None:intergenic | 50.0% | |
| ACAAGCGCGGTCAAAGATTC+GGG | - | chr7.1:7524814-7524833 | None:intergenic | 50.0% | |
| ACACCGGCATATGCAGAAGA+AGG | + | chr7.1:7524409-7524428 | MS.gene36531:CDS | 50.0% | |
| AGACATTACCACCTCACTGC+TGG | - | chr7.1:7522205-7522224 | None:intergenic | 50.0% | |
| AGCAGAGCACAACAATGAGG+AGG | + | chr7.1:7522128-7522147 | MS.gene36531:CDS | 50.0% | |
| ATGCATGACAGACTCAGTGC+TGG | - | chr7.1:7522271-7522290 | None:intergenic | 50.0% | |
| ATTGGCCGATTGTCGTTGCT+AGG | - | chr7.1:7521868-7521887 | None:intergenic | 50.0% | |
| CAATATGTCTCGGGCCATCT+TGG | - | chr7.1:7524653-7524672 | None:intergenic | 50.0% | |
| CACAAGCGCGGTCAAAGATT+CGG | - | chr7.1:7524815-7524834 | None:intergenic | 50.0% | |
| CCAGAATCAGGAAGTGGTTC+AGG | - | chr7.1:7522522-7522541 | None:intergenic | 50.0% | |
| CCTGAACCACTTCCTGATTC+TGG | + | chr7.1:7522519-7522538 | MS.gene36531:CDS | 50.0% | |
| CTCACATCAGAGCAATGAGG+TGG | + | chr7.1:7522227-7522246 | MS.gene36531:CDS | 50.0% | |
| CTGAGAGCAGAGTCAGAATC+AGG | - | chr7.1:7523548-7523567 | None:intergenic | 50.0% | |
| CTGGATGCTCAACCATGTGA+AGG | - | chr7.1:7523262-7523281 | None:intergenic | 50.0% | |
| CTGGTACCAGCCACCTTAAA+CGG | + | chr7.1:7523024-7523043 | MS.gene36531:CDS | 50.0% | |
| CTTACTTGGCTGTGTCTCTG+GGG | - | chr7.1:7522880-7522899 | None:intergenic | 50.0% | |
| CTTCACATGGTTGAGCATCC+AGG | + | chr7.1:7523260-7523279 | MS.gene36531:CDS | 50.0% | |
| CTTCATATACCCCGCGTTCA+AGG | + | chr7.1:7523105-7523124 | MS.gene36531:CDS | 50.0% | |
| GAATCAGGAAGTGGTTCAGG+TGG | - | chr7.1:7522519-7522538 | None:intergenic | 50.0% | |
| GACATTACCACCTCACTGCT+GGG | - | chr7.1:7522204-7522223 | None:intergenic | 50.0% | |
| GAGTCTGTCATGCATGAAGC+AGG | + | chr7.1:7522276-7522295 | MS.gene36531:CDS | 50.0% | |
| GATGAATTACCGGGACGTGT+TGG | + | chr7.1:7523401-7523420 | MS.gene36531:CDS | 50.0% | |
| GATGCTCAACCATGTGAAGG+GGG | - | chr7.1:7523259-7523278 | None:intergenic | 50.0% | |
| GCAGAGTCAGAATCAGGGTA+TGG | - | chr7.1:7523542-7523561 | None:intergenic | 50.0% | |
| GCATGATTACCCCCTTCACA+TGG | + | chr7.1:7523247-7523266 | MS.gene36531:CDS | 50.0% | |
| GCCAAAGACTGGATGCAGTA+TGG | + | chr7.1:7524784-7524803 | MS.gene36531:CDS | 50.0% | |
| GCCACAGGTTCAGAGTTAGT+GGG | - | chr7.1:7522549-7522568 | None:intergenic | 50.0% | |
| GGAGTTAGCCAACTGATGGT+TGG | - | chr7.1:7522670-7522689 | None:intergenic | 50.0% | |
| GGATGCTCAACCATGTGAAG+GGG | - | chr7.1:7523260-7523279 | None:intergenic | 50.0% | |
| GGCATCACCAAACAATGGTG+TGG | + | chr7.1:7521993-7522012 | MS.gene36531:CDS | 50.0% | |
| GTATCGAAGTTCCTTGCGTC+CGG | + | chr7.1:7524738-7524757 | MS.gene36531:CDS | 50.0% | |
| TCATATACCCCGCGTTCAAG+GGG | + | chr7.1:7523107-7523126 | MS.gene36531:CDS | 50.0% | |
| TCTGCAACCTCGGTTCAACA+TGG | + | chr7.1:7523304-7523323 | MS.gene36531:CDS | 50.0% | |
| TGACAAGAAGTCTACCCCTG+AGG | + | chr7.1:7521939-7521958 | MS.gene36531:CDS | 50.0% | |
| TGCATGACAGACTCAGTGCT+GGG | - | chr7.1:7522270-7522289 | None:intergenic | 50.0% | |
| TGCCACAGGTTCAGAGTTAG+TGG | - | chr7.1:7522550-7522569 | None:intergenic | 50.0% | |
| TTTGGACCATCATGAGGCAC+TGG | + | chr7.1:7522644-7522663 | MS.gene36531:CDS | 50.0% | |
| ! | CGGTTAGCCCTGAATGTAGA+AGG | + | chr7.1:7522946-7522965 | MS.gene36531:CDS | 50.0% |
| ! | TCTGCATATGCCGGTGTTAG+TGG | - | chr7.1:7524406-7524425 | None:intergenic | 50.0% |
| ! | TGGGAATTGGCTAGCTGATC+AGG | - | chr7.1:7522705-7522724 | None:intergenic | 50.0% |
| ! | TTAGTGGGCGATCCAGAATC+AGG | - | chr7.1:7522534-7522553 | None:intergenic | 50.0% |
| !! | AATGTGCCGTTTAAGGTGGC+TGG | - | chr7.1:7523033-7523052 | None:intergenic | 50.0% |
| !! | AGCACTGGCTCAAAAGTTGC+TGG | + | chr7.1:7523005-7523024 | MS.gene36531:CDS | 50.0% |
| !! | CTGATCAGGCGAGAGTGTTT+CGG | - | chr7.1:7522691-7522710 | None:intergenic | 50.0% |
| ACAAGTGCCTCCACTGTCTC+CGG | - | chr7.1:7524760-7524779 | None:intergenic | 55.0% | |
| CCTTCCTCTGCCACTAACAC+CGG | + | chr7.1:7524393-7524412 | MS.gene36531:CDS | 55.0% | |
| GCCCACTAACTCTGAACCTG+TGG | + | chr7.1:7522545-7522564 | MS.gene36531:CDS | 55.0% | |
| GGCGATCCAGAATCAGGAAG+TGG | - | chr7.1:7522528-7522547 | None:intergenic | 55.0% | |
| GGTTGCGGCTTCTGAACTGA+AGG | + | chr7.1:7523940-7523959 | MS.gene36531:CDS | 55.0% | |
| GTACCCCACACTCTCCAAGA+TGG | + | chr7.1:7524636-7524655 | MS.gene36531:CDS | 55.0% | |
| TCAGGAAGTGGTTCAGGTGG+AGG | - | chr7.1:7522516-7522535 | None:intergenic | 55.0% | |
| ! | CAACGACGTGGTCGATTCTG+AGG | + | chr7.1:7521972-7521991 | MS.gene36531:CDS | 55.0% |
| ! | CGGTGTTAGTGGCAGAGGAA+GGG | - | chr7.1:7524395-7524414 | None:intergenic | 55.0% |
| ! | GGGACGTGTTGGTCTGACAT+TGG | + | chr7.1:7523412-7523431 | MS.gene36531:CDS | 55.0% |
| ! | TATGCCGGTGTTAGTGGCAG+AGG | - | chr7.1:7524400-7524419 | None:intergenic | 55.0% |
| ACCACTTCCCCTTGAACGCG+GGG | - | chr7.1:7523117-7523136 | None:intergenic | 60.0% | |
| CACCACTTCCCCTTGAACGC+GGG | - | chr7.1:7523118-7523137 | None:intergenic | 60.0% | |
| CGTTCAAGGGGAAGTGGTGC+TGG | + | chr7.1:7523119-7523138 | MS.gene36531:CDS | 60.0% | |
| CGTTGCTGAGTGGTGCCTCA+GGG | - | chr7.1:7521957-7521976 | None:intergenic | 60.0% | |
| GCACCACTTCCCCTTGAACG+CGG | - | chr7.1:7523119-7523138 | None:intergenic | 60.0% | |
| GCGTCATGACTGTCTGCCAC+AGG | - | chr7.1:7522564-7522583 | None:intergenic | 60.0% | |
| GCTGGGCTGTGCTTCAGACA+TGG | - | chr7.1:7522187-7522206 | None:intergenic | 60.0% | |
| GGCAACACTTGACACGCCGA+TGG | + | chr7.1:7521897-7521916 | MS.gene36531:CDS | 60.0% | |
| GGGGCCTCAAGTATGTGCAG+AGG | - | chr7.1:7524045-7524064 | None:intergenic | 60.0% | |
| GTTGCTGAGTGGTGCCTCAG+GGG | - | chr7.1:7521956-7521975 | None:intergenic | 60.0% | |
| TCGACCACGTCGTTGCTGAG+TGG | - | chr7.1:7521967-7521986 | None:intergenic | 60.0% | |
| TCGGGCCATCTTGGAGAGTG+TGG | - | chr7.1:7524644-7524663 | None:intergenic | 60.0% | |
| TCGTTGCTGAGTGGTGCCTC+AGG | - | chr7.1:7521958-7521977 | None:intergenic | 60.0% | |
| TGAAGCACAGCCCAGCAGTG+AGG | + | chr7.1:7522191-7522210 | MS.gene36531:CDS | 60.0% | |
| TTCCTTGCGTCCGGAGACAG+TGG | + | chr7.1:7524747-7524766 | MS.gene36531:CDS | 60.0% | |
| ! | CCGGTGTTAGTGGCAGAGGA+AGG | - | chr7.1:7524396-7524415 | None:intergenic | 60.0% |
| ! | CGGGCCATCTTGGAGAGTGT+GGG | - | chr7.1:7524643-7524662 | None:intergenic | 60.0% |
| ! | GGGCCATCTTGGAGAGTGTG+GGG | - | chr7.1:7524642-7524661 | None:intergenic | 60.0% |
| ! | GGTTGGCCAGTGCCTCATGA+TGG | - | chr7.1:7522653-7522672 | None:intergenic | 60.0% |
| !! | GGCACTGGCCAACCATCAGT+TGG | + | chr7.1:7522659-7522678 | MS.gene36531:CDS | 60.0% |
| ACCCCGCGTTCAAGGGGAAG+TGG | + | chr7.1:7523113-7523132 | MS.gene36531:CDS | 65.0% | |
| AGCACAGCCCAGCAGTGAGG+TGG | + | chr7.1:7522194-7522213 | MS.gene36531:CDS | 65.0% | |
| CTCCACTGTCTCCGGACGCA+AGG | - | chr7.1:7524752-7524771 | None:intergenic | 65.0% | |
| CTTGCGTCCGGAGACAGTGG+AGG | + | chr7.1:7524750-7524769 | MS.gene36531:CDS | 65.0% | |
| GGCACCACTCAGCAACGACG+TGG | + | chr7.1:7521960-7521979 | MS.gene36531:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 7521790 | 7524849 | 7521790 | ID=MS.gene36531 |
| chr7.1 | mRNA | 7521790 | 7524849 | 7521790 | ID=MS.gene36531.t1;Parent=MS.gene36531 |
| chr7.1 | exon | 7521790 | 7524849 | 7521790 | ID=MS.gene36531.t1.exon1;Parent=MS.gene36531.t1 |
| chr7.1 | CDS | 7521790 | 7524849 | 7521790 | ID=cds.MS.gene36531.t1;Parent=MS.gene36531.t1 |
| Gene Sequence |
| Protein sequence |
