Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37155.t1 | XP_013451171.1 | 99.6 | 555 | 2 | 0 | 1 | 555 | 1 | 555 | 0.00E+00 | 1112.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37155.t1 | Q9FWA4 | 74.3 | 561 | 138 | 1 | 1 | 555 | 1 | 561 | 1.8e-250 | 866.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37155.t1 | G7ZV05 | 99.6 | 555 | 2 | 0 | 1 | 555 | 1 | 555 | 0.0e+00 | 1112.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene058638 | MS.gene37155 | 0.802225 | 6.21E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37155.t1 | MTR_6g016380 | 99.640 | 555 | 2 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1156 |
MS.gene37155.t1 | MTR_7g055600 | 71.429 | 434 | 119 | 4 | 125 | 555 | 3 | 434 | 0.0 | 650 |
MS.gene37155.t1 | MTR_7g057530 | 71.429 | 434 | 119 | 4 | 125 | 555 | 3 | 434 | 0.0 | 650 |
MS.gene37155.t1 | MTR_7g075840 | 48.511 | 470 | 222 | 8 | 85 | 553 | 212 | 662 | 5.03e-146 | 436 |
MS.gene37155.t1 | MTR_2g027740 | 49.261 | 406 | 201 | 4 | 149 | 553 | 264 | 665 | 4.48e-144 | 431 |
MS.gene37155.t1 | MTR_3g107930 | 50.777 | 386 | 188 | 2 | 169 | 553 | 202 | 586 | 7.04e-144 | 427 |
MS.gene37155.t1 | MTR_3g107930 | 50.777 | 386 | 188 | 2 | 169 | 553 | 279 | 663 | 5.93e-143 | 428 |
MS.gene37155.t1 | MTR_8g092000 | 46.814 | 408 | 207 | 5 | 149 | 554 | 180 | 579 | 1.48e-136 | 409 |
MS.gene37155.t1 | MTR_8g033360 | 47.597 | 437 | 209 | 8 | 85 | 519 | 179 | 597 | 1.19e-134 | 408 |
MS.gene37155.t1 | MTR_2g015550 | 42.292 | 480 | 254 | 9 | 78 | 553 | 72 | 532 | 8.28e-133 | 397 |
MS.gene37155.t1 | MTR_4g109890 | 45.455 | 407 | 213 | 5 | 149 | 551 | 131 | 532 | 2.03e-125 | 379 |
MS.gene37155.t1 | MTR_2g461670 | 44.039 | 411 | 221 | 5 | 148 | 554 | 185 | 590 | 1.10e-119 | 365 |
MS.gene37155.t1 | MTR_2g006790 | 39.130 | 483 | 241 | 11 | 78 | 553 | 72 | 508 | 4.77e-111 | 340 |
MS.gene37155.t1 | MTR_2g082650 | 41.262 | 412 | 220 | 8 | 162 | 553 | 1 | 410 | 1.33e-110 | 336 |
MS.gene37155.t1 | MTR_2g082650 | 40.136 | 441 | 232 | 10 | 136 | 553 | 108 | 539 | 5.51e-110 | 339 |
MS.gene37155.t1 | MTR_4g133570 | 39.547 | 397 | 213 | 7 | 178 | 552 | 70 | 461 | 6.18e-99 | 308 |
MS.gene37155.t1 | MTR_7g012370 | 39.506 | 405 | 225 | 6 | 161 | 546 | 125 | 528 | 3.66e-96 | 303 |
MS.gene37155.t1 | MTR_6g013840 | 39.903 | 411 | 227 | 6 | 161 | 552 | 120 | 529 | 7.99e-93 | 294 |
MS.gene37155.t1 | MTR_7g096160 | 40.000 | 355 | 183 | 5 | 202 | 553 | 325 | 652 | 3.17e-86 | 280 |
MS.gene37155.t1 | MTR_3g452360 | 38.360 | 378 | 207 | 10 | 192 | 551 | 8 | 377 | 3.60e-83 | 264 |
MS.gene37155.t1 | MTR_3g452360 | 37.405 | 393 | 220 | 10 | 177 | 551 | 142 | 526 | 1.03e-82 | 268 |
MS.gene37155.t1 | MTR_1g070490 | 40.413 | 339 | 170 | 6 | 202 | 535 | 268 | 579 | 2.18e-77 | 256 |
MS.gene37155.t1 | MTR_7g012370 | 42.182 | 275 | 142 | 4 | 203 | 461 | 168 | 441 | 6.60e-67 | 224 |
MS.gene37155.t1 | MTR_4g133942 | 48.500 | 200 | 73 | 3 | 357 | 553 | 160 | 332 | 4.13e-55 | 189 |
MS.gene37155.t1 | MTR_7g074680 | 29.868 | 529 | 320 | 15 | 42 | 552 | 164 | 659 | 8.71e-53 | 191 |
MS.gene37155.t1 | MTR_7g074680 | 34.324 | 370 | 208 | 9 | 193 | 552 | 258 | 602 | 9.89e-52 | 187 |
MS.gene37155.t1 | MTR_7g074680 | 34.324 | 370 | 208 | 9 | 193 | 552 | 218 | 562 | 1.15e-51 | 186 |
MS.gene37155.t1 | MTR_7g074680 | 34.324 | 370 | 208 | 9 | 193 | 552 | 278 | 622 | 1.25e-51 | 187 |
MS.gene37155.t1 | MTR_7g074680 | 34.324 | 370 | 208 | 9 | 193 | 552 | 278 | 622 | 1.74e-51 | 186 |
MS.gene37155.t1 | MTR_7g074680 | 34.324 | 370 | 208 | 9 | 193 | 552 | 298 | 642 | 2.13e-51 | 186 |
MS.gene37155.t1 | MTR_4g118030 | 31.414 | 191 | 122 | 6 | 359 | 540 | 145 | 335 | 5.43e-23 | 100 |
MS.gene37155.t1 | MTR_3g092310 | 30.526 | 190 | 124 | 5 | 359 | 540 | 140 | 329 | 1.11e-20 | 94.0 |
MS.gene37155.t1 | MTR_7g094230 | 30.857 | 175 | 116 | 4 | 359 | 528 | 151 | 325 | 4.16e-20 | 92.4 |
MS.gene37155.t1 | MTR_7g109210 | 30.814 | 172 | 114 | 4 | 359 | 525 | 159 | 330 | 7.84e-20 | 91.7 |
MS.gene37155.t1 | MTR_6g008900 | 26.351 | 296 | 178 | 10 | 240 | 525 | 74 | 339 | 1.49e-19 | 90.9 |
MS.gene37155.t1 | MTR_4g071620 | 26.351 | 296 | 178 | 10 | 240 | 525 | 74 | 339 | 1.49e-19 | 90.9 |
MS.gene37155.t1 | MTR_5g036580 | 29.534 | 193 | 123 | 6 | 359 | 540 | 166 | 356 | 2.09e-18 | 87.8 |
MS.gene37155.t1 | MTR_1g089820 | 29.474 | 190 | 126 | 5 | 359 | 540 | 154 | 343 | 1.69e-15 | 78.6 |
MS.gene37155.t1 | MTR_1g021855 | 29.688 | 192 | 125 | 6 | 359 | 540 | 165 | 356 | 1.87e-15 | 78.6 |
MS.gene37155.t1 | MTR_3g111600 | 27.225 | 191 | 130 | 5 | 359 | 540 | 80 | 270 | 5.35e-15 | 75.9 |
MS.gene37155.t1 | MTR_8g078240 | 27.461 | 193 | 129 | 6 | 359 | 540 | 142 | 334 | 1.69e-13 | 72.4 |
MS.gene37155.t1 | MTR_5g019220 | 28.272 | 191 | 128 | 6 | 359 | 540 | 166 | 356 | 1.07e-12 | 70.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37155.t1 | AT3G02350 | 74.862 | 545 | 137 | 0 | 11 | 555 | 17 | 561 | 0.0 | 845 |
MS.gene37155.t1 | AT3G25140 | 65.719 | 563 | 181 | 8 | 1 | 555 | 1 | 559 | 0.0 | 750 |
MS.gene37155.t1 | AT3G61130 | 51.733 | 404 | 187 | 6 | 153 | 553 | 273 | 671 | 4.32e-151 | 449 |
MS.gene37155.t1 | AT5G47780 | 50.390 | 385 | 187 | 2 | 170 | 554 | 235 | 615 | 1.33e-145 | 433 |
MS.gene37155.t1 | AT4G38270 | 49.490 | 392 | 192 | 3 | 167 | 553 | 288 | 678 | 1.04e-141 | 425 |
MS.gene37155.t1 | AT4G38270 | 49.490 | 392 | 192 | 3 | 167 | 553 | 284 | 674 | 1.05e-141 | 425 |
MS.gene37155.t1 | AT1G18580 | 47.537 | 406 | 206 | 5 | 150 | 551 | 132 | 534 | 3.41e-133 | 399 |
MS.gene37155.t1 | AT2G46480 | 46.552 | 406 | 214 | 3 | 148 | 551 | 132 | 536 | 8.84e-130 | 390 |
MS.gene37155.t1 | AT2G46480 | 46.552 | 406 | 214 | 3 | 148 | 551 | 145 | 549 | 2.52e-129 | 389 |
MS.gene37155.t1 | AT2G20810 | 42.917 | 480 | 249 | 8 | 80 | 553 | 75 | 535 | 1.24e-127 | 384 |
MS.gene37155.t1 | AT2G46480 | 43.350 | 406 | 202 | 4 | 148 | 551 | 132 | 511 | 9.41e-115 | 350 |
MS.gene37155.t1 | AT2G46480 | 43.350 | 406 | 202 | 4 | 148 | 551 | 145 | 524 | 2.05e-114 | 350 |
MS.gene37155.t1 | AT5G54690 | 37.529 | 429 | 243 | 9 | 148 | 553 | 106 | 532 | 9.29e-103 | 320 |
MS.gene37155.t1 | AT3G01040 | 39.198 | 449 | 238 | 10 | 137 | 552 | 83 | 529 | 1.28e-97 | 306 |
MS.gene37155.t1 | AT3G01040 | 39.198 | 449 | 238 | 10 | 137 | 552 | 83 | 529 | 1.28e-97 | 306 |
MS.gene37155.t1 | AT5G15470 | 39.344 | 427 | 234 | 8 | 149 | 552 | 105 | 529 | 1.27e-96 | 304 |
MS.gene37155.t1 | AT1G06780 | 39.633 | 381 | 200 | 7 | 177 | 553 | 233 | 587 | 4.82e-89 | 286 |
MS.gene37155.t1 | AT1G06780 | 39.633 | 381 | 200 | 7 | 177 | 553 | 246 | 600 | 8.15e-89 | 286 |
MS.gene37155.t1 | AT2G30575 | 36.486 | 444 | 249 | 9 | 115 | 553 | 193 | 608 | 1.18e-87 | 283 |
MS.gene37155.t1 | AT3G01040 | 36.937 | 444 | 222 | 11 | 137 | 552 | 83 | 496 | 3.34e-83 | 268 |
MS.gene37155.t1 | AT3G58790 | 36.802 | 394 | 223 | 10 | 179 | 551 | 16 | 404 | 9.25e-80 | 256 |
MS.gene37155.t1 | AT3G58790 | 34.676 | 447 | 252 | 12 | 139 | 551 | 96 | 536 | 3.36e-79 | 259 |
MS.gene37155.t1 | AT2G38650 | 34.278 | 353 | 208 | 7 | 202 | 552 | 286 | 616 | 2.86e-55 | 197 |
MS.gene37155.t1 | AT2G38650 | 34.278 | 353 | 208 | 7 | 202 | 552 | 286 | 616 | 2.86e-55 | 197 |
MS.gene37155.t1 | AT2G38650 | 34.100 | 261 | 149 | 7 | 202 | 461 | 286 | 524 | 1.22e-31 | 129 |
MS.gene37155.t1 | AT3G06260 | 28.421 | 190 | 128 | 4 | 359 | 540 | 150 | 339 | 1.56e-20 | 93.6 |
MS.gene37155.t1 | AT4G02130 | 30.000 | 190 | 125 | 5 | 359 | 540 | 150 | 339 | 1.83e-19 | 90.5 |
MS.gene37155.t1 | AT4G02130 | 30.000 | 190 | 125 | 5 | 359 | 540 | 150 | 339 | 1.83e-19 | 90.5 |
MS.gene37155.t1 | AT4G02130 | 30.000 | 190 | 125 | 5 | 359 | 540 | 150 | 339 | 1.83e-19 | 90.5 |
MS.gene37155.t1 | AT3G28340 | 31.638 | 177 | 114 | 5 | 357 | 526 | 153 | 329 | 5.03e-19 | 89.4 |
MS.gene37155.t1 | AT3G62660 | 29.474 | 190 | 126 | 5 | 359 | 540 | 164 | 353 | 1.60e-18 | 87.8 |
MS.gene37155.t1 | AT1G70090 | 29.319 | 191 | 126 | 6 | 359 | 540 | 169 | 359 | 3.93e-18 | 87.0 |
MS.gene37155.t1 | AT1G70090 | 29.319 | 191 | 126 | 6 | 359 | 540 | 169 | 359 | 3.93e-18 | 87.0 |
MS.gene37155.t1 | AT1G02720 | 29.714 | 175 | 118 | 4 | 359 | 528 | 165 | 339 | 8.36e-18 | 85.9 |
MS.gene37155.t1 | AT1G02720 | 29.714 | 175 | 118 | 4 | 359 | 528 | 165 | 339 | 8.36e-18 | 85.9 |
MS.gene37155.t1 | AT1G24170 | 25.000 | 312 | 193 | 11 | 240 | 540 | 81 | 362 | 2.24e-16 | 81.6 |
MS.gene37155.t1 | AT1G19300 | 29.480 | 173 | 116 | 5 | 359 | 525 | 150 | 322 | 1.72e-15 | 78.6 |
MS.gene37155.t1 | AT1G13250 | 28.421 | 190 | 128 | 4 | 359 | 540 | 144 | 333 | 6.22e-14 | 73.9 |
MS.gene37155.t1 | AT3G50760 | 25.698 | 179 | 124 | 5 | 357 | 526 | 134 | 312 | 9.18e-11 | 63.9 |
Find 113 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGTAAGATATTACGCAATTT+AGG | 0.100856 | 6.2:-11482097 | None:intergenic |
ATTGCGTAATATCTTACTTT+TGG | 0.234871 | 6.2:+11482102 | MS.gene37155:CDS |
CAAGATCCAATGGCGGTTTC+TGG | 0.247730 | 6.2:+11479747 | None:intergenic |
TGACTTCGTTGTTGAGTAAA+AGG | 0.252347 | 6.2:-11482960 | None:intergenic |
ATCCAACATCGACAGGTATT+TGG | 0.269061 | 6.2:-11482044 | None:intergenic |
AAAGCATGTGCTTGGACTTA+TGG | 0.269972 | 6.2:+11482283 | MS.gene37155:CDS |
TTGAAGGTCTCCTTGATTAA+AGG | 0.276921 | 6.2:-11482256 | None:intergenic |
CAAACTCTTGGGAACTGATT+TGG | 0.285099 | 6.2:-11481597 | None:intergenic |
GTAAGATATTACGCAATTTA+GGG | 0.288691 | 6.2:-11482096 | None:intergenic |
TTTGTCCAGATGTGCAATTT+TGG | 0.312058 | 6.2:+11483154 | MS.gene37155:CDS |
TAAGTCCAAGCACATGCTTT+TGG | 0.336542 | 6.2:-11482280 | None:intergenic |
TCCGTGGATTCTTCTCTTAC+CGG | 0.336621 | 6.2:+11479796 | MS.gene37155:CDS |
GTTGAAGATGTTTGATGAAT+TGG | 0.345952 | 6.2:+11481310 | MS.gene37155:CDS |
GCACAGAACATTACCATTAC+TGG | 0.352779 | 6.2:+11482347 | MS.gene37155:CDS |
AGAACGAAGACCAGACAATA+TGG | 0.369537 | 6.2:+11482906 | MS.gene37155:intron |
TCATGGCATGTACTTGGATT+AGG | 0.374618 | 6.2:+11482992 | MS.gene37155:CDS |
CTTTCATCTCTATACTTCTC+CGG | 0.388330 | 6.2:-11481662 | None:intergenic |
AGCTTAAGCTTGATATTTCT+AGG | 0.388924 | 6.2:+11481285 | MS.gene37155:CDS |
AGACCAGACAATATGGAAAT+CGG | 0.388975 | 6.2:+11482913 | MS.gene37155:CDS |
TCCCAAGAGTTTGCATTGCT+TGG | 0.390754 | 6.2:+11481607 | MS.gene37155:CDS |
ATCTCATCCATGCTAATACT+TGG | 0.391177 | 6.2:-11483022 | None:intergenic |
TAAATATGTTGACAGCGATA+TGG | 0.394960 | 6.2:+11483129 | MS.gene37155:CDS |
ATAAGCCAAAATTGCACATC+TGG | 0.401451 | 6.2:-11483159 | None:intergenic |
GAGTCATCATTCTCAGTAGA+AGG | 0.408210 | 6.2:-11479885 | None:intergenic |
AGGTTTGTGGAAGATTGATT+TGG | 0.416602 | 6.2:+11482156 | MS.gene37155:CDS |
AGCCAAGCAATGCAAACTCT+TGG | 0.417299 | 6.2:-11481609 | None:intergenic |
GACAAATCATGGCATGTACT+TGG | 0.421269 | 6.2:+11482986 | MS.gene37155:CDS |
GGTGCCGTTGAAATCTGTTT+CGG | 0.422824 | 6.2:+11482193 | MS.gene37155:CDS |
CAGAGAGAGTTGCAATGAAA+AGG | 0.425309 | 6.2:-11479845 | None:intergenic |
TTTCTCTCATCCTTTAATCA+AGG | 0.433708 | 6.2:+11482246 | MS.gene37155:CDS |
TGAAAGTTTGGTTTAAAATG+AGG | 0.442153 | 6.2:+11481846 | MS.gene37155:CDS |
CGCAATTTAGGGTACATCTC+TGG | 0.448080 | 6.2:-11482085 | None:intergenic |
GACCAGACAATATGGAAATC+GGG | 0.448864 | 6.2:+11482914 | MS.gene37155:CDS |
TTACAGGATCTTCCTACTAC+TGG | 0.449291 | 6.2:+11481134 | MS.gene37155:intron |
CATTGAAATCTGACCCACTT+AGG | 0.457831 | 6.2:+11481186 | MS.gene37155:CDS |
TCCCCGATTTCCATATTGTC+TGG | 0.461507 | 6.2:-11482916 | None:intergenic |
CATTGAGAATCAAGGTGATA+AGG | 0.462472 | 6.2:+11481985 | MS.gene37155:CDS |
CTCAACACATCCTCATCAAT+CGG | 0.464839 | 6.2:-11481398 | None:intergenic |
CGAAGTCACTGGACAAATCA+TGG | 0.468896 | 6.2:+11482975 | MS.gene37155:CDS |
ATGTTGCTGCAATGAAAGTT+TGG | 0.471183 | 6.2:+11481834 | MS.gene37155:CDS |
GTTTGCATTGCTTGGCTATG+AGG | 0.472066 | 6.2:+11481615 | MS.gene37155:CDS |
TTACCTTGTTCTGCCAGTAA+TGG | 0.482948 | 6.2:-11482360 | None:intergenic |
TTTAAAATGAGGCCGGTTGA+AGG | 0.483172 | 6.2:+11481857 | MS.gene37155:CDS |
GCCAAGCAATGCAAACTCTT+GGG | 0.486260 | 6.2:-11481608 | None:intergenic |
TTGCTTGGCTATGAGGCTGA+TGG | 0.491342 | 6.2:+11481622 | MS.gene37155:CDS |
CCAATGGCGGTTTCTGGTAG+AGG | 0.491768 | 6.2:+11479753 | None:intergenic |
TATTTGATCTTGATGCTTGG+AGG | 0.492476 | 6.2:+11482314 | MS.gene37155:CDS |
CTTAAATTCATCATATGTAC+CGG | 0.497877 | 6.2:+11481922 | MS.gene37155:CDS |
TCAATCCAAAAGCATGTGCT+TGG | 0.499392 | 6.2:+11482275 | MS.gene37155:CDS |
ATATATTTGATCTTGATGCT+TGG | 0.500145 | 6.2:+11482311 | MS.gene37155:CDS |
ATTCTCAGTAGAAGGATTTG+TGG | 0.503088 | 6.2:-11479877 | None:intergenic |
GCAGTTTGAGAAAGAGATCA+AGG | 0.503614 | 6.2:+11481421 | MS.gene37155:CDS |
TTACTCAACAACGAAGTCAC+TGG | 0.504531 | 6.2:+11482964 | MS.gene37155:CDS |
AGTATAGAGATGAAAGTCCT+AGG | 0.505593 | 6.2:+11481669 | MS.gene37155:CDS |
GATTTGGATGGGAAGGTGAA+TGG | 0.507230 | 6.2:+11482172 | MS.gene37155:CDS |
TTTCATCTCTATACTTCTCC+GGG | 0.514817 | 6.2:-11481661 | None:intergenic |
AAAAGGACTTGACAGGTTTG+TGG | 0.514967 | 6.2:+11482143 | MS.gene37155:CDS |
AAATCCACTCTTGTCCTAAG+TGG | 0.522559 | 6.2:-11481200 | None:intergenic |
CCTCTACCAGAAACCGCCAT+TGG | 0.524791 | 6.2:-11479753 | None:intergenic |
TGCTTGGCTATGAGGCTGAT+GGG | 0.525319 | 6.2:+11481623 | MS.gene37155:CDS |
TGATGATGTTGTGGTGCAAA+AGG | 0.536392 | 6.2:+11482126 | MS.gene37155:CDS |
TGTGGAAGATTGATTTGGAT+GGG | 0.537910 | 6.2:+11482161 | MS.gene37155:CDS |
TGCCAAATACCTGTCGATGT+TGG | 0.538893 | 6.2:+11482042 | MS.gene37155:CDS |
GAAGATAATCCAACATCGAC+AGG | 0.540192 | 6.2:-11482051 | None:intergenic |
GCTGCTGTTATTCATTACAA+TGG | 0.540639 | 6.2:+11483052 | MS.gene37155:CDS |
GCGTCATTGTTTGAGTCGGA+TGG | 0.540800 | 6.2:+11481374 | MS.gene37155:CDS |
TTGTGGAAGATTGATTTGGA+TGG | 0.543073 | 6.2:+11482160 | MS.gene37155:CDS |
TGTTAATGAGTCACTTGCTA+AGG | 0.546277 | 6.2:+11481538 | MS.gene37155:CDS |
CAGCATTACATTGAGAATCA+AGG | 0.549426 | 6.2:+11481977 | MS.gene37155:CDS |
TAGAGATGAAAGTCCTAGGC+CGG | 0.550345 | 6.2:+11481673 | MS.gene37155:CDS |
GGATCTTCAAACTCCGGCCT+AGG | 0.550398 | 6.2:-11481686 | None:intergenic |
TCACGTACTGCGAATATCGA+TGG | 0.551728 | 6.2:-11482222 | None:intergenic |
ACAATGGAAACATGAAACCT+TGG | 0.551889 | 6.2:+11483068 | MS.gene37155:CDS |
GGGTGAGAAGATTTCGAACC+CGG | 0.565653 | 6.2:+11481643 | MS.gene37155:CDS |
TTCAAAGCAATATCTAGCCA+AGG | 0.567247 | 6.2:-11483085 | None:intergenic |
AAATCGGGGACGCTTCCACC+TGG | 0.569876 | 6.2:+11482929 | MS.gene37155:CDS |
TCTGGTAGAGGAGGCAGAGG+TGG | 0.570702 | 6.2:+11479765 | MS.gene37155:CDS |
ATACAATCCAAGTATTAGCA+TGG | 0.580209 | 6.2:+11483015 | MS.gene37155:CDS |
ATGCTTATGCTGCATATGCT+AGG | 0.582801 | 6.2:+11481261 | MS.gene37155:CDS |
CATCATATGTACCGGTGTTG+AGG | 0.585707 | 6.2:+11481930 | MS.gene37155:CDS |
ACATATGCATTACCAGTAGT+AGG | 0.586130 | 6.2:-11481146 | None:intergenic |
AGTTTGGTTTAAAATGAGGC+CGG | 0.588130 | 6.2:+11481850 | MS.gene37155:CDS |
TAAAGAATGCAGTTGAGCCA+TGG | 0.589043 | 6.2:+11481777 | MS.gene37155:CDS |
ACATAGCAGAGATAAAGATC+CGG | 0.591248 | 6.2:-11479815 | None:intergenic |
AAGATGTTTGATGAATTGGC+TGG | 0.598245 | 6.2:+11481314 | MS.gene37155:CDS |
AACAATGACGCTCTGTACGT+TGG | 0.601791 | 6.2:-11481362 | None:intergenic |
CAGAGCGTCATTGTTTGAGT+CGG | 0.602189 | 6.2:+11481370 | MS.gene37155:CDS |
CGTGATAGCTGTGTCGGTGG+TGG | 0.602400 | 6.2:+11481742 | MS.gene37155:CDS |
AATCCACTCTTGTCCTAAGT+GGG | 0.603135 | 6.2:-11481199 | None:intergenic |
TCCGGTAAGAGAAGAATCCA+CGG | 0.606005 | 6.2:-11479797 | None:intergenic |
GCCTCAACTTGCCTCAACAC+CGG | 0.612683 | 6.2:-11481941 | None:intergenic |
GTGGTGCAAAAGGACTTGAC+AGG | 0.614307 | 6.2:+11482136 | MS.gene37155:CDS |
AGACAACGTGATAGCTGTGT+CGG | 0.620965 | 6.2:+11481736 | MS.gene37155:CDS |
ACCGGTGTTGAGGCAAGTTG+AGG | 0.622859 | 6.2:+11481940 | MS.gene37155:CDS |
GTTTCTGGTAGAGGAGGCAG+AGG | 0.623285 | 6.2:+11479762 | MS.gene37155:CDS |
AAAATGAGGCCGGTTGAAGG+AGG | 0.624677 | 6.2:+11481860 | MS.gene37155:CDS |
GAAGATTGATTTGGATGGGA+AGG | 0.627613 | 6.2:+11482165 | MS.gene37155:CDS |
ACCAGACAATATGGAAATCG+GGG | 0.633868 | 6.2:+11482915 | MS.gene37155:CDS |
AGGATAGAGTGAAGATTGCG+AGG | 0.634682 | 6.2:+11481441 | MS.gene37155:CDS |
ATGGCGGTTTCTGGTAGAGG+AGG | 0.640501 | 6.2:+11479756 | MS.gene37155:CDS |
GAGTAAAAGGTAATCAAACC+AGG | 0.642054 | 6.2:-11482947 | None:intergenic |
AAACTCGGATCTTCAAACTC+CGG | 0.646387 | 6.2:-11481692 | None:intergenic |
TGACCCACTTAGGACAAGAG+TGG | 0.652138 | 6.2:+11481196 | MS.gene37155:CDS |
GTCGGTGGTGGTTAGATCTG+TGG | 0.652481 | 6.2:+11481754 | MS.gene37155:CDS |
AGAACCGAAACAGATTTCAA+CGG | 0.653696 | 6.2:-11482197 | None:intergenic |
TTACCATTACTGGCAGAACA+AGG | 0.659270 | 6.2:+11482357 | MS.gene37155:CDS |
TGCGAGGATGATGATTGTTG+AGG | 0.674761 | 6.2:+11481457 | MS.gene37155:CDS |
ATTGCATAATGATACAAACT+CGG | 0.677991 | 6.2:-11481707 | None:intergenic |
CAACGTGATAGCTGTGTCGG+TGG | 0.680418 | 6.2:+11481739 | MS.gene37155:CDS |
GTCGGATGGTCCGATTGATG+AGG | 0.696242 | 6.2:+11481388 | MS.gene37155:CDS |
TAAAAGGTAATCAAACCAGG+TGG | 0.699075 | 6.2:-11482944 | None:intergenic |
CGATTGATGAGGATGTGTTG+AGG | 0.706532 | 6.2:+11481399 | MS.gene37155:CDS |
AGAGGTGGATCTACTCTCCG+TGG | 0.709141 | 6.2:+11479780 | MS.gene37155:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTCATCAAATTAACATAT+GGG | - | chr6.2:11480668-11480687 | None:intergenic | 15.0% |
!! | AATTCATGAAATTAACATAT+GGG | - | chr6.2:11480027-11480046 | None:intergenic | 15.0% |
!! | ACTGATGATAATAATAATTT+GGG | + | chr6.2:11480144-11480163 | MS.gene37155:intron | 15.0% |
!! | CAATATCCAAAATTTATAAT+AGG | - | chr6.2:11480275-11480294 | None:intergenic | 15.0% |
!! | CAATTTCCAAAATAAAAAAT+GGG | - | chr6.2:11479966-11479985 | None:intergenic | 15.0% |
!! | TATATAAAATTGCCAAAAAA+AGG | + | chr6.2:11482596-11482615 | MS.gene37155:intron | 15.0% |
!! | TATATATCATATATGACTAT+GGG | + | chr6.2:11482515-11482534 | MS.gene37155:intron | 15.0% |
!! | TTATATATCATATATGACTA+TGG | + | chr6.2:11482514-11482533 | MS.gene37155:intron | 15.0% |
!!! | AAAACTGAATCTAAAATAAA+GGG | - | chr6.2:11480305-11480324 | None:intergenic | 15.0% |
!!! | ACAATAACTTTATAAACTTT+TGG | + | chr6.2:11480604-11480623 | MS.gene37155:intron | 15.0% |
!!! | CTATTATAAATTTTGGATAT+TGG | + | chr6.2:11480273-11480292 | MS.gene37155:intron | 15.0% |
!!! | GTTTTAAAGTTTGATTTTTA+TGG | + | chr6.2:11479937-11479956 | MS.gene37155:intron | 15.0% |
!!! | TAAAACTGAATCTAAAATAA+AGG | - | chr6.2:11480306-11480325 | None:intergenic | 15.0% |
!!! | TAAACTGAATCTAAAATAAA+GGG | - | chr6.2:11479996-11480015 | None:intergenic | 15.0% |
!!! | TTAAACTGAATCTAAAATAA+AGG | - | chr6.2:11479997-11480016 | None:intergenic | 15.0% |
!!! | TTGAAACCTATTATAAATTT+TGG | + | chr6.2:11480266-11480285 | MS.gene37155:intron | 15.0% |
!!! | TTTTTTTGGCAATTTTATAT+AGG | - | chr6.2:11482597-11482616 | None:intergenic | 15.0% |
!! | ATTAAATGACAAAAGAAAAG+TGG | + | chr6.2:11482568-11482587 | MS.gene37155:intron | 20.0% |
!! | CAAAATTTGATGAATTGAAT+TGG | - | chr6.2:11480216-11480235 | None:intergenic | 20.0% |
!! | CAATTCATCAAATTAACATA+TGG | - | chr6.2:11480669-11480688 | None:intergenic | 20.0% |
!! | CAATTCATGAAATTAACATA+TGG | - | chr6.2:11480028-11480047 | None:intergenic | 20.0% |
!! | CACTGATGATAATAATAATT+TGG | + | chr6.2:11480143-11480162 | MS.gene37155:intron | 20.0% |
!! | CCAATTTCCAAAATAAAAAA+TGG | - | chr6.2:11479967-11479986 | None:intergenic | 20.0% |
!! | CCTTTGTACAATTATTAAAT+GGG | + | chr6.2:11482838-11482857 | MS.gene37155:intron | 20.0% |
!! | CTGATGATAATAATAATTTG+GGG | + | chr6.2:11480145-11480164 | MS.gene37155:intron | 20.0% |
!! | GAATTAATTAATCAATCTTG+TGG | + | chr6.2:11480055-11480074 | MS.gene37155:intron | 20.0% |
!! | TCCTTTGTACAATTATTAAA+TGG | + | chr6.2:11482837-11482856 | MS.gene37155:intron | 20.0% |
!! | TGAATCAATACAAAAATCTT+TGG | + | chr6.2:11483104-11483123 | MS.gene37155:CDS | 20.0% |
!! | TGATGATAATAATAATTTGG+GGG | + | chr6.2:11480146-11480165 | MS.gene37155:intron | 20.0% |
!! | TTCATTTCTCAAATTATTAC+CGG | - | chr6.2:11480992-11481011 | None:intergenic | 20.0% |
!!! | CCATTTTTTATTTTGGAAAT+TGG | + | chr6.2:11479964-11479983 | MS.gene37155:intron | 20.0% |
!!! | TGTCACTTGTTTTTAATTAA+TGG | - | chr6.2:11482478-11482497 | None:intergenic | 20.0% |
!!! | TTGAATCTTGAATTATTTTG+AGG | - | chr6.2:11482541-11482560 | None:intergenic | 20.0% |
! | AGTAAGATATTACGCAATTT+AGG | - | chr6.2:11482100-11482119 | None:intergenic | 25.0% |
! | ATATATTTGATCTTGATGCT+TGG | + | chr6.2:11482311-11482330 | MS.gene37155:CDS | 25.0% |
! | ATTGCATAATGATACAAACT+CGG | - | chr6.2:11481710-11481729 | None:intergenic | 25.0% |
! | CCCATTTAATAATTGTACAA+AGG | - | chr6.2:11482841-11482860 | None:intergenic | 25.0% |
! | CTTAAATTCATCATATGTAC+CGG | + | chr6.2:11481922-11481941 | MS.gene37155:CDS | 25.0% |
! | GATGATAATAATAATTTGGG+GGG | + | chr6.2:11480147-11480166 | MS.gene37155:intron | 25.0% |
! | GTAAGATATTACGCAATTTA+GGG | - | chr6.2:11482099-11482118 | None:intergenic | 25.0% |
! | GTATCAAATAGAGATACAAT+TGG | + | chr6.2:11482761-11482780 | MS.gene37155:intron | 25.0% |
! | TATAGAGGTTGTAACAAATT+AGG | + | chr6.2:11481098-11481117 | MS.gene37155:intron | 25.0% |
! | TCACATATTAGTGAATTAGT+TGG | + | chr6.2:11481034-11481053 | MS.gene37155:intron | 25.0% |
! | TCATTTCTCAAATTATTACC+GGG | - | chr6.2:11480991-11481010 | None:intergenic | 25.0% |
! | TGAGTTTCATCATAATAAGT+CGG | + | chr6.2:11482683-11482702 | MS.gene37155:intron | 25.0% |
! | TTTAATGTAATCATATGTGC+TGG | + | chr6.2:11480182-11480201 | MS.gene37155:intron | 25.0% |
!! | ATTGCGTAATATCTTACTTT+TGG | + | chr6.2:11482102-11482121 | MS.gene37155:CDS | 25.0% |
!! | TGAAAGTTTGGTTTAAAATG+AGG | + | chr6.2:11481846-11481865 | MS.gene37155:CDS | 25.0% |
!!! | AGGTTTTTGTTTTTGTTTAC+AGG | + | chr6.2:11481118-11481137 | MS.gene37155:intron | 25.0% |
!!! | TGCATTTTTAGAGATAAAGT+CGG | + | chr6.2:11481883-11481902 | MS.gene37155:CDS | 25.0% |
!!! | TGGAAACCCATTTTTTATTT+TGG | + | chr6.2:11479957-11479976 | MS.gene37155:intron | 25.0% |
ACAAAATCACACAAAAACAG+AGG | - | chr6.2:11479919-11479938 | None:intergenic | 30.0% | |
ACAAGATAATAACTACAAGC+AGG | - | chr6.2:11482392-11482411 | None:intergenic | 30.0% | |
AGCAAAGAGTTACAAGTTAT+TGG | - | chr6.2:11482445-11482464 | None:intergenic | 30.0% | |
AGCTTAAGCTTGATATTTCT+AGG | + | chr6.2:11481285-11481304 | MS.gene37155:CDS | 30.0% | |
ATACAATCCAAGTATTAGCA+TGG | + | chr6.2:11483015-11483034 | MS.gene37155:CDS | 30.0% | |
ATTTACTAACACATAGATCC+CGG | + | chr6.2:11480970-11480989 | MS.gene37155:intron | 30.0% | |
CAATTCATGAAACTAACAGA+TGG | - | chr6.2:11480337-11480356 | None:intergenic | 30.0% | |
CTGTAGAGATTCATATTGAT+TGG | + | chr6.2:11482728-11482747 | MS.gene37155:intron | 30.0% | |
GAGTTTCATCATAATAAGTC+GGG | + | chr6.2:11482684-11482703 | MS.gene37155:intron | 30.0% | |
GATGAATTGAATGAATCTTG+TGG | + | chr6.2:11480680-11480699 | MS.gene37155:intron | 30.0% | |
GTTGAAGATGTTTGATGAAT+TGG | + | chr6.2:11481310-11481329 | MS.gene37155:CDS | 30.0% | |
TAAATATGTTGACAGCGATA+TGG | + | chr6.2:11483129-11483148 | MS.gene37155:CDS | 30.0% | |
TATCATCAGTGTGAATATGT+CGG | - | chr6.2:11480134-11480153 | None:intergenic | 30.0% | |
TGAATGATTTGAGCATAATC+AGG | + | chr6.2:11480438-11480457 | MS.gene37155:intron | 30.0% | |
TTTCTCTCATCCTTTAATCA+AGG | + | chr6.2:11482246-11482265 | MS.gene37155:CDS | 30.0% | |
! | ATATGTGCACAGAACATTTT+TGG | + | chr6.2:11481163-11481182 | MS.gene37155:CDS | 30.0% |
! | TGAATTGGCTGGTAATTTTT+CGG | + | chr6.2:11481325-11481344 | MS.gene37155:CDS | 30.0% |
! | TTTTTCATGTCGTTACAAAC+AGG | + | chr6.2:11481807-11481826 | MS.gene37155:CDS | 30.0% |
!! | TTAAATGGGTTACTGTAAAG+TGG | + | chr6.2:11482852-11482871 | MS.gene37155:intron | 30.0% |
!!! | TGTAGTCAAACACCTTTTTT+TGG | - | chr6.2:11482611-11482630 | None:intergenic | 30.0% |
AACCTAATCTGTTACAAGCT+CGG | - | chr6.2:11480854-11480873 | None:intergenic | 35.0% | |
AAGATGTTTGATGAATTGGC+TGG | + | chr6.2:11481314-11481333 | MS.gene37155:CDS | 35.0% | |
ACAATGGAAACATGAAACCT+TGG | + | chr6.2:11483068-11483087 | MS.gene37155:CDS | 35.0% | |
ACATAGCAGAGATAAAGATC+CGG | - | chr6.2:11479818-11479837 | None:intergenic | 35.0% | |
ACATATGCATTACCAGTAGT+AGG | - | chr6.2:11481149-11481168 | None:intergenic | 35.0% | |
ACATGAAAAACATGCTTCCA+TGG | - | chr6.2:11481797-11481816 | None:intergenic | 35.0% | |
AGAACCGAAACAGATTTCAA+CGG | - | chr6.2:11482200-11482219 | None:intergenic | 35.0% | |
AGACCAGACAATATGGAAAT+CGG | + | chr6.2:11482913-11482932 | MS.gene37155:CDS | 35.0% | |
AGGTTTGTGGAAGATTGATT+TGG | + | chr6.2:11482156-11482175 | MS.gene37155:CDS | 35.0% | |
AGTATAGAGATGAAAGTCCT+AGG | + | chr6.2:11481669-11481688 | MS.gene37155:CDS | 35.0% | |
ATAAGCCAAAATTGCACATC+TGG | - | chr6.2:11483162-11483181 | None:intergenic | 35.0% | |
ATCTCATCCATGCTAATACT+TGG | - | chr6.2:11483025-11483044 | None:intergenic | 35.0% | |
ATGATTTGAGCATAATCAGG+TGG | + | chr6.2:11480441-11480460 | MS.gene37155:intron | 35.0% | |
ATGTTGCTGCAATGAAAGTT+TGG | + | chr6.2:11481834-11481853 | MS.gene37155:CDS | 35.0% | |
ATTCTCAGTAGAAGGATTTG+TGG | - | chr6.2:11479880-11479899 | None:intergenic | 35.0% | |
CAGCATTACATTGAGAATCA+AGG | + | chr6.2:11481977-11481996 | MS.gene37155:CDS | 35.0% | |
CATTGAGAATCAAGGTGATA+AGG | + | chr6.2:11481985-11482004 | MS.gene37155:CDS | 35.0% | |
CTTGCTAAGGCAAAAAAGAA+CGG | + | chr6.2:11481551-11481570 | MS.gene37155:CDS | 35.0% | |
CTTTCATCTCTATACTTCTC+CGG | - | chr6.2:11481665-11481684 | None:intergenic | 35.0% | |
GAATTGAATGAATCTTGTGG+TGG | + | chr6.2:11480683-11480702 | MS.gene37155:intron | 35.0% | |
GAGTAAAAGGTAATCAAACC+AGG | - | chr6.2:11482950-11482969 | None:intergenic | 35.0% | |
GATCATTATTCACGAAACCA+TGG | - | chr6.2:11482810-11482829 | None:intergenic | 35.0% | |
GCTGCTGTTATTCATTACAA+TGG | + | chr6.2:11483052-11483071 | MS.gene37155:CDS | 35.0% | |
TAAAAGGTAATCAAACCAGG+TGG | - | chr6.2:11482947-11482966 | None:intergenic | 35.0% | |
TATTTGATCTTGATGCTTGG+AGG | + | chr6.2:11482314-11482333 | MS.gene37155:CDS | 35.0% | |
TGACTTCGTTGTTGAGTAAA+AGG | - | chr6.2:11482963-11482982 | None:intergenic | 35.0% | |
TGATTTGAGCATAATCAGGT+GGG | + | chr6.2:11480442-11480461 | MS.gene37155:intron | 35.0% | |
TGTTTGACTACACTGAGTTT+AGG | + | chr6.2:11482619-11482638 | MS.gene37155:intron | 35.0% | |
TTACATCATCTTCCTACTAC+TGG | + | chr6.2:11480879-11480898 | MS.gene37155:intron | 35.0% | |
TTCAAAGCAATATCTAGCCA+AGG | - | chr6.2:11483088-11483107 | None:intergenic | 35.0% | |
TTGAAGGTCTCCTTGATTAA+AGG | - | chr6.2:11482259-11482278 | None:intergenic | 35.0% | |
TTGCTAAGGCAAAAAAGAAC+GGG | + | chr6.2:11481552-11481571 | MS.gene37155:CDS | 35.0% | |
TTTCATCTCTATACTTCTCC+GGG | - | chr6.2:11481664-11481683 | None:intergenic | 35.0% | |
! | AGTTTGGTTTAAAATGAGGC+CGG | + | chr6.2:11481850-11481869 | MS.gene37155:CDS | 35.0% |
! | TGTTAATGAGTCACTTGCTA+AGG | + | chr6.2:11481538-11481557 | MS.gene37155:CDS | 35.0% |
! | TTTGTCCAGATGTGCAATTT+TGG | + | chr6.2:11483154-11483173 | MS.gene37155:CDS | 35.0% |
!! | ACTTTTGGATGATGATGTTG+TGG | + | chr6.2:11482117-11482136 | MS.gene37155:CDS | 35.0% |
!! | TGTAATCATATGTGCTGGTT+CGG | + | chr6.2:11480187-11480206 | MS.gene37155:intron | 35.0% |
!! | TGTGGAAGATTGATTTGGAT+GGG | + | chr6.2:11482161-11482180 | MS.gene37155:CDS | 35.0% |
!! | TTGTGGAAGATTGATTTGGA+TGG | + | chr6.2:11482160-11482179 | MS.gene37155:CDS | 35.0% |
AAAAACACCGACACAAACAC+TGG | + | chr6.2:11480093-11480112 | MS.gene37155:intron | 40.0% | |
AAAAATGCACCTCCTTCAAC+CGG | - | chr6.2:11481872-11481891 | None:intergenic | 40.0% | |
AAAAGGACTTGACAGGTTTG+TGG | + | chr6.2:11482143-11482162 | MS.gene37155:CDS | 40.0% | |
AAACTCGGATCTTCAAACTC+CGG | - | chr6.2:11481695-11481714 | None:intergenic | 40.0% | |
AAAGCATGTGCTTGGACTTA+TGG | + | chr6.2:11482283-11482302 | MS.gene37155:CDS | 40.0% | |
AAATCCACTCTTGTCCTAAG+TGG | - | chr6.2:11481203-11481222 | None:intergenic | 40.0% | |
AATCCACTCTTGTCCTAAGT+GGG | - | chr6.2:11481202-11481221 | None:intergenic | 40.0% | |
ACCAGACAATATGGAAATCG+GGG | + | chr6.2:11482915-11482934 | MS.gene37155:CDS | 40.0% | |
AGAACGAAGACCAGACAATA+TGG | + | chr6.2:11482906-11482925 | MS.gene37155:intron | 40.0% | |
ATCCAACATCGACAGGTATT+TGG | - | chr6.2:11482047-11482066 | None:intergenic | 40.0% | |
ATCCTATCCAGTGTTTGTGT+CGG | - | chr6.2:11480103-11480122 | None:intergenic | 40.0% | |
ATGCTTATGCTGCATATGCT+AGG | + | chr6.2:11481261-11481280 | MS.gene37155:CDS | 40.0% | |
ATTCACGAAACCATGGTCTT+CGG | - | chr6.2:11482803-11482822 | None:intergenic | 40.0% | |
CAAACTCTTGGGAACTGATT+TGG | - | chr6.2:11481600-11481619 | None:intergenic | 40.0% | |
CAATATGCACTACCAGTAGT+AGG | - | chr6.2:11480894-11480913 | None:intergenic | 40.0% | |
CAGAGAGAGTTGCAATGAAA+AGG | - | chr6.2:11479848-11479867 | None:intergenic | 40.0% | |
CAGTGTCAATGTCTTAGTGT+CGG | - | chr6.2:11480402-11480421 | None:intergenic | 40.0% | |
CATTGAAATCTGACCCACTT+AGG | + | chr6.2:11481186-11481205 | MS.gene37155:CDS | 40.0% | |
CTCAACACATCCTCATCAAT+CGG | - | chr6.2:11481401-11481420 | None:intergenic | 40.0% | |
CTTGACACACCTTTGATTAG+AGG | + | chr6.2:11481066-11481085 | MS.gene37155:intron | 40.0% | |
GAAGATAATCCAACATCGAC+AGG | - | chr6.2:11482054-11482073 | None:intergenic | 40.0% | |
GAATGAGTGAACGAATCTTG+TGG | + | chr6.2:11480360-11480379 | MS.gene37155:intron | 40.0% | |
GACAAATCATGGCATGTACT+TGG | + | chr6.2:11482986-11483005 | MS.gene37155:CDS | 40.0% | |
GACCAGACAATATGGAAATC+GGG | + | chr6.2:11482914-11482933 | MS.gene37155:CDS | 40.0% | |
GAGTCATCATTCTCAGTAGA+AGG | - | chr6.2:11479888-11479907 | None:intergenic | 40.0% | |
GCACAGAACATTACCATTAC+TGG | + | chr6.2:11482347-11482366 | MS.gene37155:CDS | 40.0% | |
GCAGTTTGAGAAAGAGATCA+AGG | + | chr6.2:11481421-11481440 | MS.gene37155:CDS | 40.0% | |
TAAAGAATGCAGTTGAGCCA+TGG | + | chr6.2:11481777-11481796 | MS.gene37155:CDS | 40.0% | |
TCATGGCATGTACTTGGATT+AGG | + | chr6.2:11482992-11483011 | MS.gene37155:CDS | 40.0% | |
TGCTAAGGCAAAAAAGAACG+GGG | + | chr6.2:11481553-11481572 | MS.gene37155:CDS | 40.0% | |
TGTCTGTGTTAGTGCTTCAT+AGG | - | chr6.2:11480711-11480730 | None:intergenic | 40.0% | |
TTACAGGATCTTCCTACTAC+TGG | + | chr6.2:11481134-11481153 | MS.gene37155:intron | 40.0% | |
TTACCATTACTGGCAGAACA+AGG | + | chr6.2:11482357-11482376 | MS.gene37155:CDS | 40.0% | |
TTACCTTGTTCTGCCAGTAA+TGG | - | chr6.2:11482363-11482382 | None:intergenic | 40.0% | |
TTACTCAACAACGAAGTCAC+TGG | + | chr6.2:11482964-11482983 | MS.gene37155:CDS | 40.0% | |
TTATCCGCACGCTTAGAAAA+AGG | + | chr6.2:11480943-11480962 | MS.gene37155:intron | 40.0% | |
TTGTAAGATACCGAAGACCA+TGG | + | chr6.2:11482790-11482809 | MS.gene37155:intron | 40.0% | |
! | ACACCTTTGATTAGAGGTGT+CGG | + | chr6.2:11481072-11481091 | MS.gene37155:intron | 40.0% |
! | AGCACATGCTTTTGGATTGA+AGG | - | chr6.2:11482275-11482294 | None:intergenic | 40.0% |
! | ATCACCTTTTTCTAAGCGTG+CGG | - | chr6.2:11480950-11480969 | None:intergenic | 40.0% |
! | ATCAGAGGGTGTAAGGAATT+AGG | + | chr6.2:11480499-11480518 | MS.gene37155:intron | 40.0% |
! | CTACTACTGGTAGTGCATAT+TGG | + | chr6.2:11480892-11480911 | MS.gene37155:intron | 40.0% |
! | TAAGTCCAAGCACATGCTTT+TGG | - | chr6.2:11482283-11482302 | None:intergenic | 40.0% |
! | TCAATCCAAAAGCATGTGCT+TGG | + | chr6.2:11482275-11482294 | MS.gene37155:CDS | 40.0% |
! | TGATGATGTTGTGGTGCAAA+AGG | + | chr6.2:11482126-11482145 | MS.gene37155:CDS | 40.0% |
! | TTTAAAATGAGGCCGGTTGA+AGG | + | chr6.2:11481857-11481876 | MS.gene37155:CDS | 40.0% |
!! | GAAGATTGATTTGGATGGGA+AGG | + | chr6.2:11482165-11482184 | MS.gene37155:CDS | 40.0% |
!! | TGTCGGTGTTTTTGCTTCAT+AGG | - | chr6.2:11480086-11480105 | None:intergenic | 40.0% |
AACAATGACGCTCTGTACGT+TGG | - | chr6.2:11481365-11481384 | None:intergenic | 45.0% | |
AGACAACGTGATAGCTGTGT+CGG | + | chr6.2:11481736-11481755 | MS.gene37155:CDS | 45.0% | |
AGCCAAGCAATGCAAACTCT+TGG | - | chr6.2:11481612-11481631 | None:intergenic | 45.0% | |
AGGATAGAGTGAAGATTGCG+AGG | + | chr6.2:11481441-11481460 | MS.gene37155:CDS | 45.0% | |
CGAAGTCACTGGACAAATCA+TGG | + | chr6.2:11482975-11482994 | MS.gene37155:CDS | 45.0% | |
CGATTGATGAGGATGTGTTG+AGG | + | chr6.2:11481399-11481418 | MS.gene37155:CDS | 45.0% | |
GATTTGGATGGGAAGGTGAA+TGG | + | chr6.2:11482172-11482191 | MS.gene37155:CDS | 45.0% | |
GCCAAGCAATGCAAACTCTT+GGG | - | chr6.2:11481611-11481630 | None:intergenic | 45.0% | |
GTTTGCATTGCTTGGCTATG+AGG | + | chr6.2:11481615-11481634 | MS.gene37155:CDS | 45.0% | |
TAGAGATGAAAGTCCTAGGC+CGG | + | chr6.2:11481673-11481692 | MS.gene37155:CDS | 45.0% | |
TCACGTACTGCGAATATCGA+TGG | - | chr6.2:11482225-11482244 | None:intergenic | 45.0% | |
TCCCAAGAGTTTGCATTGCT+TGG | + | chr6.2:11481607-11481626 | MS.gene37155:CDS | 45.0% | |
TCCCCGATTTCCATATTGTC+TGG | - | chr6.2:11482919-11482938 | None:intergenic | 45.0% | |
TCCGGTAAGAGAAGAATCCA+CGG | - | chr6.2:11479800-11479819 | None:intergenic | 45.0% | |
TCCGTGGATTCTTCTCTTAC+CGG | + | chr6.2:11479796-11479815 | MS.gene37155:CDS | 45.0% | |
TGCCAAATACCTGTCGATGT+TGG | + | chr6.2:11482042-11482061 | MS.gene37155:CDS | 45.0% | |
TGCCGAGCTTGTAACAGATT+AGG | + | chr6.2:11480849-11480868 | MS.gene37155:intron | 45.0% | |
TGCGAGGATGATGATTGTTG+AGG | + | chr6.2:11481457-11481476 | MS.gene37155:CDS | 45.0% | |
TGTGCCACACCTTAGATTAG+AGG | + | chr6.2:11480817-11480836 | MS.gene37155:intron | 45.0% | |
! | CAGAGCGTCATTGTTTGAGT+CGG | + | chr6.2:11481370-11481389 | MS.gene37155:CDS | 45.0% |
! | CATCATATGTACCGGTGTTG+AGG | + | chr6.2:11481930-11481949 | MS.gene37155:CDS | 45.0% |
! | CGCAATTTAGGGTACATCTC+TGG | - | chr6.2:11482088-11482107 | None:intergenic | 45.0% |
! | GTACCGACACCTCTAATCAA+AGG | - | chr6.2:11481078-11481097 | None:intergenic | 45.0% |
! | TAATCTAAGGTGTGGCACAG+TGG | - | chr6.2:11480816-11480835 | None:intergenic | 45.0% |
! | TGTCTCACATGTGTCGTTGT+CGG | + | chr6.2:11480783-11480802 | MS.gene37155:intron | 45.0% |
!! | GGTGCCGTTGAAATCTGTTT+CGG | + | chr6.2:11482193-11482212 | MS.gene37155:CDS | 45.0% |
!! | TAGAGGTGTCGGTACTATAG+AGG | + | chr6.2:11481083-11481102 | MS.gene37155:intron | 45.0% |
AAAATGAGGCCGGTTGAAGG+AGG | + | chr6.2:11481860-11481879 | MS.gene37155:CDS | 50.0% | |
AGCATAATCAGGTGGGACAC+TGG | + | chr6.2:11480449-11480468 | MS.gene37155:intron | 50.0% | |
CACCGACACAAACACTGGAT+AGG | + | chr6.2:11480098-11480117 | MS.gene37155:intron | 50.0% | |
GCGTCATTGTTTGAGTCGGA+TGG | + | chr6.2:11481374-11481393 | MS.gene37155:CDS | 50.0% | |
GGCAAAAAAGAACGGGGCAT+TGG | + | chr6.2:11481559-11481578 | MS.gene37155:CDS | 50.0% | |
GGGTGAGAAGATTTCGAACC+CGG | + | chr6.2:11481643-11481662 | MS.gene37155:CDS | 50.0% | |
GTGGTGCAAAAGGACTTGAC+AGG | + | chr6.2:11482136-11482155 | MS.gene37155:CDS | 50.0% | |
TCCTTACACCCTCTGATGCA+CGG | - | chr6.2:11480496-11480515 | None:intergenic | 50.0% | |
TGACCCACTTAGGACAAGAG+TGG | + | chr6.2:11481196-11481215 | MS.gene37155:CDS | 50.0% | |
TGCTTGGCTATGAGGCTGAT+GGG | + | chr6.2:11481623-11481642 | MS.gene37155:CDS | 50.0% | |
TTGCTTGGCTATGAGGCTGA+TGG | + | chr6.2:11481622-11481641 | MS.gene37155:CDS | 50.0% | |
! | GCACTGGCACCTCTAATCTA+AGG | - | chr6.2:11480829-11480848 | None:intergenic | 50.0% |
! | GGCACCTCTAATCTAAGGTG+TGG | - | chr6.2:11480824-11480843 | None:intergenic | 50.0% |
ACTGGACACAGGACACACCA+AGG | + | chr6.2:11480467-11480486 | MS.gene37155:intron | 55.0% | |
AGAGGTGGATCTACTCTCCG+TGG | + | chr6.2:11479780-11479799 | MS.gene37155:CDS | 55.0% | |
CAACGTGATAGCTGTGTCGG+TGG | + | chr6.2:11481739-11481758 | MS.gene37155:CDS | 55.0% | |
GCCTCAACTTGCCTCAACAC+CGG | - | chr6.2:11481944-11481963 | None:intergenic | 55.0% | |
GGATCTTCAAACTCCGGCCT+AGG | - | chr6.2:11481689-11481708 | None:intergenic | 55.0% | |
GTCGGATGGTCCGATTGATG+AGG | + | chr6.2:11481388-11481407 | MS.gene37155:CDS | 55.0% | |
TGTTACAAGCTCGGCAGCAC+TGG | - | chr6.2:11480845-11480864 | None:intergenic | 55.0% | |
! | ACCGGTGTTGAGGCAAGTTG+AGG | + | chr6.2:11481940-11481959 | MS.gene37155:CDS | 55.0% |
! | CAAGGTGTCCGTGCATCAGA+GGG | + | chr6.2:11480485-11480504 | MS.gene37155:intron | 55.0% |
! | GTCGGTGGTGGTTAGATCTG+TGG | + | chr6.2:11481754-11481773 | MS.gene37155:CDS | 55.0% |
! | TCCGTGCATCAGAGGGTGTA+AGG | + | chr6.2:11480492-11480511 | MS.gene37155:intron | 55.0% |
!! | ATGGCGGTTTCTGGTAGAGG+AGG | + | chr6.2:11479756-11479775 | MS.gene37155:CDS | 55.0% |
!! | GTTTCTGGTAGAGGAGGCAG+AGG | + | chr6.2:11479762-11479781 | MS.gene37155:CDS | 55.0% |
AAATCGGGGACGCTTCCACC+TGG | + | chr6.2:11482929-11482948 | MS.gene37155:CDS | 60.0% | |
CCTCTGATGCACGGACACCT+TGG | - | chr6.2:11480487-11480506 | None:intergenic | 60.0% | |
CTAAGGTGTGGCACAGTGGC+AGG | - | chr6.2:11480812-11480831 | None:intergenic | 60.0% | |
TCAGGTGGGACACTGGACAC+AGG | + | chr6.2:11480456-11480475 | MS.gene37155:intron | 60.0% | |
TCTGGTAGAGGAGGCAGAGG+TGG | + | chr6.2:11479765-11479784 | MS.gene37155:CDS | 60.0% | |
! | CCAAGGTGTCCGTGCATCAG+AGG | + | chr6.2:11480484-11480503 | MS.gene37155:intron | 60.0% |
! | CGTGATAGCTGTGTCGGTGG+TGG | + | chr6.2:11481742-11481761 | MS.gene37155:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 11479756 | 11483183 | 11479756 | ID=MS.gene37155 |
chr6.2 | mRNA | 11479756 | 11483183 | 11479756 | ID=MS.gene37155.t1;Parent=MS.gene37155 |
chr6.2 | exon | 11479756 | 11479908 | 11479756 | ID=MS.gene37155.t1.exon1;Parent=MS.gene37155.t1 |
chr6.2 | CDS | 11479756 | 11479908 | 11479756 | ID=cds.MS.gene37155.t1;Parent=MS.gene37155.t1 |
chr6.2 | exon | 11481140 | 11482378 | 11481140 | ID=MS.gene37155.t1.exon2;Parent=MS.gene37155.t1 |
chr6.2 | CDS | 11481140 | 11482378 | 11481140 | ID=cds.MS.gene37155.t1;Parent=MS.gene37155.t1 |
chr6.2 | exon | 11482908 | 11483183 | 11482908 | ID=MS.gene37155.t1.exon3;Parent=MS.gene37155.t1 |
chr6.2 | CDS | 11482908 | 11483183 | 11482908 | ID=cds.MS.gene37155.t1;Parent=MS.gene37155.t1 |
Gene Sequence |
Protein sequence |