AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene37362


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene37362.t1 MTR_8g018430 94.309 861 47 1 1 859 1 861 0.0 1690
MS.gene37362.t1 MTR_8g018520 83.140 860 141 1 4 859 9 868 0.0 1491
MS.gene37362.t1 MTR_8g018510 82.326 860 145 3 6 859 11 869 0.0 1488
MS.gene37362.t1 MTR_8g018570 79.930 862 167 3 4 859 9 870 0.0 1459
MS.gene37362.t1 MTR_8g018550 80.069 868 164 2 1 859 1 868 0.0 1445
MS.gene37362.t1 MTR_8g020990 77.880 868 183 2 1 859 1 868 0.0 1430
MS.gene37362.t1 MTR_8g018690 77.011 870 184 3 1 859 1 865 0.0 1407
MS.gene37362.t1 MTR_8g018690 74.713 870 184 4 1 859 1 845 0.0 1354
MS.gene37362.t1 MTR_8g018450 76.389 864 155 8 4 859 6 828 0.0 1334
MS.gene37362.t1 MTR_2g099570 68.707 866 259 5 1 859 1 861 0.0 1251
MS.gene37362.t1 MTR_8g018420 67.447 854 273 2 7 859 7 856 0.0 1228
MS.gene37362.t1 MTR_2g099560 64.685 858 298 3 4 859 9 863 0.0 1181
MS.gene37362.t1 MTR_5g024020 63.751 869 300 7 1 859 4 867 0.0 1167
MS.gene37362.t1 MTR_8g018730 61.707 867 321 7 1 859 1 864 0.0 1140
MS.gene37362.t1 MTR_8g018735 62.109 863 315 6 5 859 7 865 0.0 1139
MS.gene37362.t1 MTR_3g081130 61.189 858 327 5 4 859 5 858 0.0 1120
MS.gene37362.t1 MTR_8g018620 63.689 862 255 10 1 859 1 807 0.0 1113
MS.gene37362.t1 MTR_8g018650 62.834 861 264 8 1 859 1 807 0.0 1105
MS.gene37362.t1 MTR_8g018730 60.277 866 305 7 1 859 1 834 0.0 1105
MS.gene37362.t1 MTR_5g024020 61.335 869 285 8 1 859 4 831 0.0 1104
MS.gene37362.t1 MTR_3g081130 62.611 789 289 5 73 859 2 786 0.0 1056
MS.gene37362.t1 MTR_8g018590 62.530 822 263 10 53 859 32 823 0.0 1046
MS.gene37362.t1 MTR_1g083020 58.005 862 332 8 8 859 17 858 0.0 1004
MS.gene37362.t1 MTR_7g113410 56.547 863 343 9 10 859 24 867 0.0 993
MS.gene37362.t1 MTR_1g104650 55.363 867 351 9 10 859 9 856 0.0 984
MS.gene37362.t1 MTR_8g018730 63.652 586 210 3 275 859 1 584 0.0 806
MS.gene37362.t1 MTR_8g018735 60.784 612 229 5 5 608 7 615 0.0 785
MS.gene37362.t1 MTR_8g020970 44.823 821 436 11 48 858 113 926 0.0 710
MS.gene37362.t1 MTR_8g021020 80.446 404 75 1 460 859 28 431 0.0 694
MS.gene37362.t1 MTR_4g066170 40.661 878 483 19 1 859 48 906 0.0 645
MS.gene37362.t1 MTR_3g479460 42.754 828 432 15 52 859 98 903 0.0 641
MS.gene37362.t1 MTR_3g079450 43.428 776 418 13 96 859 136 902 0.0 628
MS.gene37362.t1 MTR_8g080230 41.626 824 446 15 55 859 109 916 0.0 628
MS.gene37362.t1 MTR_4g088810 42.047 811 430 13 58 858 114 894 0.0 622
MS.gene37362.t1 MTR_8g011340 40.824 801 429 14 47 820 46 828 0.0 607
MS.gene37362.t1 MTR_3g079420 41.415 862 460 17 19 859 28 865 0.0 595
MS.gene37362.t1 MTR_8g020970 43.433 571 306 11 48 608 113 676 8.93e-148 451
MS.gene37362.t1 MTR_6g452500 39.577 614 332 11 248 842 12 605 7.81e-146 444
MS.gene37362.t1 MTR_3g079450 43.786 523 276 11 96 608 136 650 5.56e-133 412
MS.gene37362.t1 MTR_7g012030 62.393 117 43 1 513 628 87 203 4.24e-42 153
MS.gene37362.t1 MTR_6g046330 56.250 128 44 2 513 628 77 204 6.13e-37 142
MS.gene37362.t1 MTR_8g463810 33.186 226 85 4 420 644 197 357 1.74e-29 122
MS.gene37362.t1 MTR_4g088805 39.560 91 55 0 768 858 1 91 4.81e-16 74.7
MS.gene37362.t1 MTR_2g005920 51.786 56 27 0 732 787 58 113 4.31e-13 67.0
MS.gene37362.t1 MTR_7g113408 44.444 63 34 1 751 813 8 69 2.17e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene37362.t1 AT1G55020 54.273 866 359 10 7 859 18 859 0.0 976
MS.gene37362.t1 AT3G22400 54.119 874 361 12 7 859 32 886 0.0 965
MS.gene37362.t1 AT1G72520 43.484 821 447 10 48 859 114 926 0.0 703
MS.gene37362.t1 AT1G17420 43.447 824 442 11 48 859 108 919 0.0 697
MS.gene37362.t1 AT3G45140 41.775 845 447 19 33 859 79 896 0.0 622
MS.gene37362.t1 AT3G45140 43.490 768 400 17 109 859 4 754 0.0 608
MS.gene37362.t1 AT1G67560 41.112 827 459 15 48 859 104 917 0.0 604

Find 186 sgRNAs with CRISPR-Local

Find 265 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCATGCAGCTGTTAATTT+TGG 0.155837 8.4:-74667387 MS.gene37362:CDS
ATTCTGAACTCCAAGCATTT+TGG 0.213611 8.4:-74667527 MS.gene37362:CDS
CTATAATGGTCAAGTCAATT+AGG 0.235454 8.4:+74667220 None:intergenic
GTTACCTCCGCACCGATTCT+AGG 0.266335 8.4:-74670267 MS.gene37362:CDS
TCACTGTCCCCTTCACCTTT+TGG 0.268716 8.4:+74670907 None:intergenic
TGCCTATCTAGCTTGCTCTT+TGG 0.284977 8.4:+74668793 None:intergenic
TTAGAGGCTTTCAAGAGATT+TGG 0.301087 8.4:-74667114 MS.gene37362:CDS
AGCTTAGCTCGTCCCGTTAT+TGG 0.301482 8.4:-74669783 MS.gene37362:CDS
CTGCAGATGGATTAGAGATA+TGG 0.306273 8.4:-74667620 MS.gene37362:CDS
AGAGAATTGAAGGTGATCTT+TGG 0.324769 8.4:-74667155 MS.gene37362:CDS
GCTTCAACACCTTCACTTGC+AGG 0.327952 8.4:+74668369 None:intergenic
TGGATACCTTGAATGACTTT+AGG 0.334103 8.4:+74669119 None:intergenic
TTCTGATTCACAACCATTAG+AGG 0.338910 8.4:-74667130 MS.gene37362:CDS
CTTTAGGTGGTGGAAACTTA+AGG 0.346113 8.4:+74669135 None:intergenic
ATCTAGAGGTGTGGCTCTTA+AGG 0.350357 8.4:-74667694 MS.gene37362:intron
TGATACCTACGGTTCAATCT+TGG 0.356398 8.4:-74670784 MS.gene37362:CDS
ACAGGTGGATTCAAGGTTCT+TGG 0.357260 8.4:-74670828 MS.gene37362:CDS
TGCTGTATTATATAAGGATT+GGG 0.361705 8.4:-74667984 MS.gene37362:CDS
CTGGTCTTTGGTTATTGTGC+TGG 0.362672 8.4:+74668753 None:intergenic
ATTGTCTGCTGTATTATATA+AGG 0.364894 8.4:-74667990 MS.gene37362:CDS
AAAGTATACGGCATCTTTAC+CGG 0.367235 8.4:+74667018 None:intergenic
CTTCCAAGAGATGAATCATT+TGG 0.368825 8.4:-74669389 MS.gene37362:CDS
TCTTGTCTATAGTAGACTAA+TGG 0.377121 8.4:+74669912 None:intergenic
AGTTCCTTGAACAATGGTAT+AGG 0.379627 8.4:+74669182 None:intergenic
TGAGTTGCAAACAAAGTTGA+TGG 0.379958 8.4:+74670104 None:intergenic
CATTCATCATAGCAACAAAT+AGG 0.380660 8.4:-74668159 MS.gene37362:CDS
ACACTTGCACTACCCTCATA+TGG 0.383044 8.4:-74667422 MS.gene37362:CDS
GATACCTACGGTTCAATCTT+GGG 0.388084 8.4:-74670783 MS.gene37362:CDS
TGACCAAATGATTCATCTCT+TGG 0.388343 8.4:+74669386 None:intergenic
GGAACAATGATGAGACTCTA+AGG 0.391890 8.4:-74667053 MS.gene37362:CDS
CAAGAGATTTGGAACAAAGT+TGG 0.394650 8.4:-74667103 MS.gene37362:CDS
CTGCTGTATTATATAAGGAT+TGG 0.398026 8.4:-74667985 MS.gene37362:CDS
ATCAAGTATGTACAATTTGT+TGG 0.404374 8.4:+74668569 None:intergenic
GGAAAGTAAATATCACTAAC+AGG 0.406097 8.4:+74668390 None:intergenic
TTTAGGTGGTGGAAACTTAA+GGG 0.406321 8.4:+74669136 None:intergenic
CAAGTTCTTTCCAAAATGCT+TGG 0.406902 8.4:+74667517 None:intergenic
TCTAATCCATCTGCAGCATA+AGG 0.407144 8.4:+74667627 None:intergenic
TATAATGGTCAAGTCAATTA+GGG 0.409856 8.4:+74667221 None:intergenic
GAAGGATAAAGCAAAGTATA+CGG 0.412453 8.4:+74667006 None:intergenic
GAGACTCTAAGGAATCGATA+TGG 0.416853 8.4:-74667042 MS.gene37362:CDS
GTCAATCCTTCCTCACTTGA+AGG 0.416919 8.4:+74666988 None:intergenic
AATCTCTTGAAAGCCTCTAA+TGG 0.418384 8.4:+74667117 None:intergenic
CATCCTCAGGCTGATAGCTT+TGG 0.418449 8.4:-74668414 MS.gene37362:CDS
CTATTTGTTGCTATGATGAA+TGG 0.420998 8.4:+74668160 None:intergenic
AAGCTATCAGCCTGAGGATG+TGG 0.423011 8.4:+74668417 None:intergenic
CTATCTAGCTTGCTCTTTGG+TGG 0.425209 8.4:+74668796 None:intergenic
TCTTGACAGGACCTCTATAA+TGG 0.426680 8.4:+74667206 None:intergenic
GATAGTGACATGGGAATTCC+AGG 0.428040 8.4:-74670207 MS.gene37362:CDS
CACCAAAGAGCAAGCTAGAT+AGG 0.433954 8.4:-74668795 MS.gene37362:CDS
TCAACTTTGTTTGCAACTCA+TGG 0.435514 8.4:-74670101 MS.gene37362:CDS
AAGTTGATGGTTCCATGGTT+AGG 0.438897 8.4:+74670117 None:intergenic
TGATGGAACTTTGAAGCCAT+TGG 0.439270 8.4:-74668457 MS.gene37362:CDS
AGAAAGTGGAAAAGGTAAAG+TGG 0.439449 8.4:-74670316 MS.gene37362:CDS
AAGGTGTTGAAGCTTCAATT+TGG 0.440030 8.4:-74668359 MS.gene37362:CDS
CCACCACCTAAAGTCATTCA+AGG 0.440711 8.4:-74669125 MS.gene37362:intron
TAGCCCTATACCATTGTTCA+AGG 0.440814 8.4:-74669186 MS.gene37362:CDS
ACACATCATCAAAAGAATTC+AGG 0.441238 8.4:-74668951 MS.gene37362:intron
AGTTTATAACCTTTCTTAGC+TGG 0.442387 8.4:+74669711 None:intergenic
GTTCCTTGAACAATGGTATA+GGG 0.442713 8.4:+74669183 None:intergenic
TGGGCCGTTCAGTGGCTCTC+AGG 0.448781 8.4:-74670764 MS.gene37362:CDS
TATTGAGAAGACGTTCTTGA+TGG 0.451460 8.4:-74668029 MS.gene37362:CDS
TTCTCAATATAAAATGCTCC+TGG 0.455625 8.4:+74670189 None:intergenic
TTTACAAGAGAGATGATTGC+TGG 0.455862 8.4:-74668983 MS.gene37362:CDS
AAATATCACAGGTGGATTCA+AGG 0.457407 8.4:-74670835 MS.gene37362:CDS
CGGCCTTCGCCTTCTGATAG+AGG 0.462912 8.4:-74667655 MS.gene37362:CDS
CATCAGAAGCATGTCTTGAC+AGG 0.465331 8.4:+74667193 None:intergenic
GGAAGTAAAAGCTTATGAAT+AGG 0.477117 8.4:+74668118 None:intergenic
GTGCTGAAGCAATCCATATG+AGG 0.478585 8.4:+74667409 None:intergenic
GGACAGGTAAACGTGAAGAA+TGG 0.481824 8.4:-74669863 MS.gene37362:CDS
TTCATTTCACAGAAGCCAAA+AGG 0.484383 8.4:-74670922 MS.gene37362:CDS
CTGAAGACTTTACGAGGAGA+TGG 0.485246 8.4:-74669885 MS.gene37362:CDS
TGGAAAGAACTTGTAGAGGT+TGG 0.486789 8.4:-74667507 MS.gene37362:CDS
TTTAGAAAGCTCATCATACT+CGG 0.491253 8.4:+74667290 None:intergenic
TACCTTGGACAGAGAATTGA+AGG 0.493286 8.4:-74667165 MS.gene37362:CDS
CACTGTCCAGCTCCTAGAAT+CGG 0.493765 8.4:+74670255 None:intergenic
GTGTTGGATCCTCCAATAAC+GGG 0.494877 8.4:+74669771 None:intergenic
CGAAGGCCGTGTGGGGAAGT+AGG 0.495559 8.4:+74667669 None:intergenic
GCTAAGCAGCCCACATCCTC+AGG 0.499529 8.4:-74668427 MS.gene37362:CDS
TTAGCTCGTCCCGTTATTGG+AGG 0.499661 8.4:-74669780 MS.gene37362:CDS
ATGTGGGCTGCTTAGCTCAA+TGG 0.499826 8.4:+74668434 None:intergenic
TTCAATCTTGGGCCGTTCAG+TGG 0.504725 8.4:-74670772 MS.gene37362:CDS
CTTTATCCTTCAAGTGAGGA+AGG 0.508215 8.4:-74666994 MS.gene37362:CDS
TGCCTAATGATCTACTCAAA+AGG 0.508255 8.4:-74667943 MS.gene37362:intron
CTGCTTAGCTCAATGGCCAA+TGG 0.509548 8.4:+74668441 None:intergenic
GACAGGTAAACGTGAAGAAT+GGG 0.514304 8.4:-74669862 MS.gene37362:CDS
GATATCAACGCCCTCACCGC+TGG 0.515402 8.4:-74670861 MS.gene37362:CDS
CTAATCCATCTGCAGCATAA+GGG 0.518394 8.4:+74667628 None:intergenic
AATAAATGCAGCTGATACAA+AGG 0.518442 8.4:-74668514 MS.gene37362:CDS
AATGGAGCTGGTGTTTCACT+TGG 0.519813 8.4:+74669930 None:intergenic
TTAGAAAGCTCATCATACTC+GGG 0.520528 8.4:+74667291 None:intergenic
GGTGTTGGATCCTCCAATAA+CGG 0.521313 8.4:+74669770 None:intergenic
AAACAAAGTTGATGGTTCCA+TGG 0.521970 8.4:+74670112 None:intergenic
TATGGGCTGTTATTAAGTCA+TGG 0.522967 8.4:-74667602 MS.gene37362:CDS
AATTGACTTGACCATTATAG+AGG 0.524635 8.4:-74667217 MS.gene37362:CDS
AGAAGATTAATGCCTAAGAA+AGG 0.525519 8.4:-74667318 MS.gene37362:CDS
GATATTTAAACCAGCGGTGA+GGG 0.525980 8.4:+74670851 None:intergenic
TATATTGAGAATTTCATGCT+AGG 0.525987 8.4:-74670177 MS.gene37362:CDS
ATATTTGTAGAAAGTGGAAA+AGG 0.528541 8.4:-74670324 MS.gene37362:intron
TCCGCACCGATTCTAGGAGC+TGG 0.530615 8.4:-74670261 MS.gene37362:CDS
TGCACTTGCAAGGAGTGTCT+TGG 0.531139 8.4:-74668068 MS.gene37362:CDS
ATGGGCTGTTATTAAGTCAT+GGG 0.531811 8.4:-74667601 MS.gene37362:CDS
CTGAGGAGTTCCTTGAACAA+TGG 0.531953 8.4:+74669176 None:intergenic
GGAAAGAGATCGTTTCTTGA+AGG 0.532072 8.4:-74670294 MS.gene37362:CDS
TGCAGATGGATTAGAGATAT+GGG 0.538537 8.4:-74667619 MS.gene37362:CDS
TCACAGAAGCCAAAAGGTGA+AGG 0.539609 8.4:-74670916 MS.gene37362:CDS
TTTCTTAGCTGGTTTCCTGC+CGG 0.541247 8.4:+74669722 None:intergenic
GGACAGTGATATTGATGCAT+AGG 0.541977 8.4:-74670893 MS.gene37362:CDS
GAAAGTGGAAAAGGTAAAGT+GGG 0.542323 8.4:-74670315 MS.gene37362:CDS
CACCTTCAATTCTCTGTCCA+AGG 0.543056 8.4:+74667163 None:intergenic
TCATCAAAGGTGTTAAACTC+TGG 0.547395 8.4:+74669266 None:intergenic
AGCTTCAACAAAACATGGGT+GGG 0.548925 8.4:-74668732 MS.gene37362:CDS
GACTACCCTTATGCTGCAGA+TGG 0.551288 8.4:-74667633 MS.gene37362:CDS
GCTTCTGATGAACAATACCT+TGG 0.551474 8.4:-74667180 MS.gene37362:CDS
GTAAGTGCAGATGTTAATGT+AGG 0.552422 8.4:+74669305 None:intergenic
AGCTCTATATTTGATACCTA+CGG 0.553269 8.4:-74670795 MS.gene37362:CDS
GGCAGGAAACCAGCTAAGAA+AGG 0.554760 8.4:-74669720 MS.gene37362:intron
CAACTACATAAGCTTTAGCA+AGG 0.555120 8.4:+74668334 None:intergenic
CTATAGTAGACTAATGGAGC+TGG 0.556484 8.4:+74669918 None:intergenic
CACAGAAGCCAAAAGGTGAA+GGG 0.557115 8.4:-74670915 MS.gene37362:CDS
AGACCAGCTTCAACAAAACA+TGG 0.557573 8.4:-74668737 MS.gene37362:CDS
TTTCTTGTTATCTAGAGGTG+TGG 0.558961 8.4:-74667703 MS.gene37362:intron
ATTTACTTTCCTGCAAGTGA+AGG 0.560892 8.4:-74668378 MS.gene37362:CDS
TATACCAATGGCTGATGAGT+TGG 0.561542 8.4:+74668292 None:intergenic
AAGGAACTCCTCAGAACTGA+TGG 0.562150 8.4:-74669167 MS.gene37362:CDS
CCTTGAATGACTTTAGGTGG+TGG 0.562607 8.4:+74669125 None:intergenic
ACCGCTGGTTTAAATATCAC+AGG 0.565086 8.4:-74670846 MS.gene37362:CDS
CACCTTGCCTTACCCTCGAA+GGG 0.565890 8.4:-74669751 MS.gene37362:CDS
TCAGAAGGCGAAGGCCGTGT+GGG 0.568063 8.4:+74667661 None:intergenic
ATTGAGAAGACGTTCTTGAT+GGG 0.569095 8.4:-74668028 MS.gene37362:CDS
AGCTATCAGCCTGAGGATGT+GGG 0.574193 8.4:+74668418 None:intergenic
ATCACCAACTCATCAGCCAT+TGG 0.576161 8.4:-74668296 MS.gene37362:intron
TGAAGACTTTACGAGGAGAT+GGG 0.579763 8.4:-74669884 MS.gene37362:CDS
AAATGCACGCACATCATCAA+AGG 0.579942 8.4:+74669253 None:intergenic
GAAAAGTGAATCAATCTGGA+TGG 0.587432 8.4:-74669021 MS.gene37362:intron
ATTGATGCATAGGAATGTGT+TGG 0.588062 8.4:-74670883 MS.gene37362:CDS
ACACCTTGCCTTACCCTCGA+AGG 0.589170 8.4:-74669752 MS.gene37362:CDS
AAGCTAGATAGGCAACTCTA+CGG 0.589256 8.4:-74668784 MS.gene37362:CDS
TCTAAGGAATCGATATGGAC+CGG 0.593095 8.4:-74667037 MS.gene37362:CDS
TCGAGGGTAAGGCAAGGTGT+TGG 0.593510 8.4:+74669755 None:intergenic
CTTGAAGATATTCCTAACCA+TGG 0.597036 8.4:-74670129 MS.gene37362:CDS
TAGAAAGCTCATCATACTCG+GGG 0.597066 8.4:+74667292 None:intergenic
ATCAGAAGGCGAAGGCCGTG+TGG 0.599096 8.4:+74667660 None:intergenic
GAGGAAGGATTGACTTGCAG+AGG 0.599561 8.4:-74666979 MS.gene37362:CDS
TTAGGTGGTGGAAACTTAAG+GGG 0.604953 8.4:+74669137 None:intergenic
AGCTCCTAGAATCGGTGCGG+AGG 0.607434 8.4:+74670263 None:intergenic
GATATGGATATATTGAGTCA+TGG 0.608683 8.4:+74668544 None:intergenic
TTTCAATGGGATAGTGACAT+GGG 0.609030 8.4:-74670216 MS.gene37362:CDS
ACTTTACGAGGAGATGGGAC+AGG 0.611272 8.4:-74669879 MS.gene37362:CDS
AACAAATAGGCATCTTAGTG+TGG 0.616014 8.4:-74668146 MS.gene37362:CDS
TTCATTGTGTCACGATAGTG+CGG 0.616157 8.4:+74668097 None:intergenic
ATTAGTGCTACTAGTGCTGA+TGG 0.617007 8.4:-74670738 MS.gene37362:intron
AAGGGTAGTCCTCTATCAGA+AGG 0.619758 8.4:+74667646 None:intergenic
TTGGACAATATCCGTACGGA+GGG 0.620033 8.4:-74667368 MS.gene37362:CDS
ACAGAAGCCAAAAGGTGAAG+GGG 0.621182 8.4:-74670914 MS.gene37362:CDS
TGCTGAAGCAATCCATATGA+GGG 0.621259 8.4:+74667410 None:intergenic
ACTCAATATATCCATATCTG+AGG 0.622340 8.4:-74668539 MS.gene37362:CDS
ACCTGTGATATTTAAACCAG+CGG 0.625148 8.4:+74670845 None:intergenic
TTAAGGATGTACCCTCCGTA+CGG 0.626305 8.4:+74667357 None:intergenic
CAGCTTCAACAAAACATGGG+TGG 0.628074 8.4:-74668733 MS.gene37362:CDS
CAGAAGGCGAAGGCCGTGTG+GGG 0.628083 8.4:+74667662 None:intergenic
GAGTGTCTTGGTAAATGCAG+AGG 0.628961 8.4:-74668056 MS.gene37362:CDS
GTGCTTCACCATCAGTTCTG+AGG 0.630572 8.4:+74669159 None:intergenic
TGATATTTAAACCAGCGGTG+AGG 0.636637 8.4:+74670850 None:intergenic
ACGGCCCAAGATTGAACCGT+AGG 0.637844 8.4:+74670779 None:intergenic
TGAACATTAATGCACTTGCA+AGG 0.638089 8.4:-74668078 MS.gene37362:CDS
CAGATCCTAAAAGTGAGAGA+CGG 0.638615 8.4:-74669427 MS.gene37362:CDS
AGTGTCTTGGTAAATGCAGA+GGG 0.642136 8.4:-74668055 MS.gene37362:CDS
GTAAACGTGAAGAATGGGAA+AGG 0.646192 8.4:-74669857 MS.gene37362:CDS
TTTGCTTTATCCTTCAAGTG+AGG 0.646310 8.4:-74666998 MS.gene37362:CDS
CTATGATGTCTACAATGATG+TGG 0.649661 8.4:-74669826 MS.gene37362:CDS
GCTGGTTTAAATATCACAGG+TGG 0.653722 8.4:-74670843 MS.gene37362:CDS
ACCTTGCCTTACCCTCGAAG+GGG 0.659200 8.4:-74669750 MS.gene37362:CDS
ATACCTTGAATGACTTTAGG+TGG 0.660488 8.4:+74669122 None:intergenic
TTTGGACAATATCCGTACGG+AGG 0.662406 8.4:-74667369 MS.gene37362:CDS
TCAACCTGAGAGCCACTGAA+CGG 0.665209 8.4:+74670760 None:intergenic
GAACTTGTAGAGGTTGGTCA+CGG 0.669529 8.4:-74667501 MS.gene37362:CDS
AATGGCTGATGAGTTGGTGA+TGG 0.671659 8.4:+74668298 None:intergenic
GACCAGCTTCAACAAAACAT+GGG 0.675546 8.4:-74668736 MS.gene37362:CDS
AGTCCTCTATCAGAAGGCGA+AGG 0.676314 8.4:+74667652 None:intergenic
TATGATGTCTACAATGATGT+GGG 0.681464 8.4:-74669825 MS.gene37362:CDS
CCTTGCCTTACCCTCGAAGG+GGG 0.681885 8.4:-74669749 MS.gene37362:CDS
TCCAGCTCCTAGAATCGGTG+CGG 0.683704 8.4:+74670260 None:intergenic
AGAAAGCTCATCATACTCGG+GGG 0.702262 8.4:+74667293 None:intergenic
GGACCAAAGCTATCAGCCTG+AGG 0.704451 8.4:+74668411 None:intergenic
AAGGATCCTACTTCCCCACA+CGG 0.713360 8.4:-74667675 MS.gene37362:CDS
GAAGAACTGAAGACTTTACG+AGG 0.717242 8.4:-74669891 MS.gene37362:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATTATATATTTTTTAAT+AGG - chr8.4:74669280-74669299 MS.gene37362:CDS 0.0%
!! TTTGATATCAATATTATAAA+CGG + chr8.4:74670127-74670146 None:intergenic 10.0%
!! TAATATAATGTATAACTCAA+TGG + chr8.4:74669657-74669676 None:intergenic 15.0%
!!! AGTTAGTATATTATGTTTTA+AGG - chr8.4:74668216-74668235 MS.gene37362:intron 15.0%
!!! CAATATTCTTATTTTAGTTT+TGG + chr8.4:74668995-74669014 None:intergenic 15.0%
!! AGATATATCAAGCAATAATA+AGG + chr8.4:74669052-74669071 None:intergenic 20.0%
!! AGGTTAAGAATTAAAAAACT+AGG + chr8.4:74669032-74669051 None:intergenic 20.0%
!! TAAAAAACTAGGATGAAAAA+TGG + chr8.4:74669021-74669040 None:intergenic 20.0%
!! TATATTCAGTAGTTAAAAAG+AGG - chr8.4:74669990-74670009 MS.gene37362:intron 20.0%
!!! ATACAAAGTTCATTTTCAAT+GGG - chr8.4:74667652-74667671 MS.gene37362:CDS 20.0%
!!! ATTTTTAGTCATGCAAAATT+TGG - chr8.4:74668795-74668814 MS.gene37362:CDS 20.0%
!!! ATTTTTCATAATTACCTTGT+TGG + chr8.4:74667849-74667868 None:intergenic 20.0%
!!! TACTTAATAGTGTCAAATTT+TGG + chr8.4:74667909-74667928 None:intergenic 20.0%
!!! TCATATTTTAAACTCACAAT+TGG - chr8.4:74667302-74667321 MS.gene37362:CDS 20.0%
!!! TTATGATGGCATTATTTTTT+TGG - chr8.4:74668333-74668352 MS.gene37362:CDS 20.0%
!!! TTTTAATGTCTAAACATCAA+TGG - chr8.4:74670059-74670078 MS.gene37362:CDS 20.0%
! ATATTTGTAGAAAGTGGAAA+AGG - chr8.4:74667557-74667576 MS.gene37362:CDS 25.0%
! ATCAAGTATGTACAATTTGT+TGG + chr8.4:74669315-74669334 None:intergenic 25.0%
! ATTGTCTGCTGTATTATATA+AGG - chr8.4:74669891-74669910 MS.gene37362:CDS 25.0%
! GTCAATTGAATTTATACCAA+TGG + chr8.4:74669604-74669623 None:intergenic 25.0%
! TAACTACTGAATATATGTCT+AGG + chr8.4:74669985-74670004 None:intergenic 25.0%
! TATAATGGTCAAGTCAATTA+GGG + chr8.4:74670663-74670682 None:intergenic 25.0%
! TATATTGAGAATTTCATGCT+AGG - chr8.4:74667704-74667723 MS.gene37362:intron 25.0%
! TGCTGTATTATATAAGGATT+GGG - chr8.4:74669897-74669916 MS.gene37362:CDS 25.0%
! TTAATATCTATATGTGTGAC+AGG - chr8.4:74669674-74669693 MS.gene37362:intron 25.0%
! TTGAACAAAAACTCATTCAA+AGG - chr8.4:74670807-74670826 MS.gene37362:CDS 25.0%
! TTGCTTGATATATCTAATGT+AGG - chr8.4:74669057-74669076 MS.gene37362:intron 25.0%
!! AAACGGAAAGTTTAAAATTG+CGG + chr8.4:74670110-74670129 None:intergenic 25.0%
!! ATCATTTTGTAAGAAAAGGA+AGG + chr8.4:74669408-74669427 None:intergenic 25.0%
!! CATACAAAGTTCATTTTCAA+TGG - chr8.4:74667651-74667670 MS.gene37362:CDS 25.0%
!! GACTAAAAATGTGTTTCTAA+TGG + chr8.4:74668785-74668804 None:intergenic 25.0%
!! GCTTTCTAAAAACTATCAAA+AGG - chr8.4:74670604-74670623 MS.gene37362:intron 25.0%
!! TTCCATCATTTTGTAAGAAA+AGG + chr8.4:74669412-74669431 None:intergenic 25.0%
!! TTCCTTTTCTTACAAAATGA+TGG - chr8.4:74669407-74669426 MS.gene37362:CDS 25.0%
!!! ATTAATCTTCTGCTTTTAGT+TGG + chr8.4:74670554-74670573 None:intergenic 25.0%
!!! TTTTGAAAAGTGAATCAATC+TGG - chr8.4:74668856-74668875 MS.gene37362:intron 25.0%
AATAAATGCAGCTGATACAA+AGG - chr8.4:74669367-74669386 MS.gene37362:CDS 30.0%
ACACATCATCAAAAGAATTC+AGG - chr8.4:74668930-74668949 MS.gene37362:intron 30.0%
ACTCAATATATCCATATCTG+AGG - chr8.4:74669342-74669361 MS.gene37362:CDS 30.0%
AGAAGATTAATGCCTAAGAA+AGG - chr8.4:74670563-74670582 MS.gene37362:intron 30.0%
AGCTCTATATTTGATACCTA+CGG - chr8.4:74667086-74667105 MS.gene37362:CDS 30.0%
AGTTTATAACCTTTCTTAGC+TGG + chr8.4:74668173-74668192 None:intergenic 30.0%
CATTCATCATAGCAACAAAT+AGG - chr8.4:74669722-74669741 MS.gene37362:CDS 30.0%
CTATAATGGTCAAGTCAATT+AGG + chr8.4:74670664-74670683 None:intergenic 30.0%
CTGCTGTATTATATAAGGAT+TGG - chr8.4:74669896-74669915 MS.gene37362:CDS 30.0%
GAACGTCAAATATAAACATG+TGG - chr8.4:74667339-74667358 MS.gene37362:CDS 30.0%
GAAGGATAAAGCAAAGTATA+CGG + chr8.4:74670878-74670897 None:intergenic 30.0%
GATATGGATATATTGAGTCA+TGG + chr8.4:74669340-74669359 None:intergenic 30.0%
GGAAAGTAAATATCACTAAC+AGG + chr8.4:74669494-74669513 None:intergenic 30.0%
GGAAGTAAAAGCTTATGAAT+AGG + chr8.4:74669766-74669785 None:intergenic 30.0%
GTTATGAGTATAAATCCATG+TGG + chr8.4:74667204-74667223 None:intergenic 30.0%
TATGATGTCTACAATGATGT+GGG - chr8.4:74668056-74668075 MS.gene37362:CDS 30.0%
TCTTGTCTATAGTAGACTAA+TGG + chr8.4:74667972-74667991 None:intergenic 30.0%
TGTGACATATTTGTAGAAAG+TGG - chr8.4:74667551-74667570 MS.gene37362:CDS 30.0%
TTCTCAATATAAAATGCTCC+TGG + chr8.4:74667695-74667714 None:intergenic 30.0%
TTTAGAAAGCTCATCATACT+CGG + chr8.4:74670594-74670613 None:intergenic 30.0%
! AATGTTTTCATCCCTAGTAT+AGG - chr8.4:74668303-74668322 MS.gene37362:CDS 30.0%
! AATTTTGGACAATATCCGTA+CGG - chr8.4:74670509-74670528 MS.gene37362:intron 30.0%
! ATGTTTTCATCCCTAGTATA+GGG - chr8.4:74668304-74668323 MS.gene37362:CDS 30.0%
! CTAGGATCTAATGTTTTGTA+AGG + chr8.4:74669967-74669986 None:intergenic 30.0%
! CTATTTGTTGCTATGATGAA+TGG + chr8.4:74669724-74669743 None:intergenic 30.0%
! TTTAAGGTATTTCTGCACAA+AGG - chr8.4:74668232-74668251 MS.gene37362:intron 30.0%
!! AATTGACTTGACCATTATAG+AGG - chr8.4:74670664-74670683 MS.gene37362:intron 30.0%
!! ATTTTGGAAAGAACTTGTAG+AGG - chr8.4:74670370-74670389 MS.gene37362:intron 30.0%
!! GCATTTATTTTCCTCAGATA+TGG + chr8.4:74669356-74669375 None:intergenic 30.0%
!! TACCTTTTGAGTAGATCATT+AGG + chr8.4:74669943-74669962 None:intergenic 30.0%
!!! TCAATTAGGGTGTCATTTTT+TGG + chr8.4:74670650-74670669 None:intergenic 30.0%
!!! TGAATTCTTTTGATGATGTG+TGG + chr8.4:74668931-74668950 None:intergenic 30.0%
AAAGTATACGGCATCTTTAC+CGG + chr8.4:74670866-74670885 None:intergenic 35.0%
AACAAATAGGCATCTTAGTG+TGG - chr8.4:74669735-74669754 MS.gene37362:CDS 35.0%
AATCTCTTGAAAGCCTCTAA+TGG + chr8.4:74670767-74670786 None:intergenic 35.0%
ACACCTCTAGATAACAAGAA+AGG + chr8.4:74670179-74670198 None:intergenic 35.0%
ACCTGTGATATTTAAACCAG+CGG + chr8.4:74667039-74667058 None:intergenic 35.0%
ACTTGAAAAATGCAACATGG+TGG - chr8.4:74670405-74670424 MS.gene37362:intron 35.0%
AGAAAGTGGAAAAGGTAAAG+TGG - chr8.4:74667565-74667584 MS.gene37362:CDS 35.0%
AGAGAATTGAAGGTGATCTT+TGG - chr8.4:74670726-74670745 MS.gene37362:intron 35.0%
AGTTCCTTGAACAATGGTAT+AGG + chr8.4:74668702-74668721 None:intergenic 35.0%
ATAACATACCCCCTATACTA+GGG + chr8.4:74668317-74668336 None:intergenic 35.0%
ATACCTTGAATGACTTTAGG+TGG + chr8.4:74668762-74668781 None:intergenic 35.0%
ATTGAGAAGACGTTCTTGAT+GGG - chr8.4:74669853-74669872 MS.gene37362:CDS 35.0%
ATTGATGCATAGGAATGTGT+TGG - chr8.4:74666998-74667017 MS.gene37362:CDS 35.0%
ATTTACTTTCCTGCAAGTGA+AGG - chr8.4:74669503-74669522 MS.gene37362:intron 35.0%
CAAGTTCTTTCCAAAATGCT+TGG + chr8.4:74670367-74670386 None:intergenic 35.0%
CTATGATGTCTACAATGATG+TGG - chr8.4:74668055-74668074 MS.gene37362:CDS 35.0%
CTTCCAAGAGATGAATCATT+TGG - chr8.4:74668492-74668511 MS.gene37362:CDS 35.0%
CTTGAAAAATGCAACATGGT+GGG - chr8.4:74670406-74670425 MS.gene37362:intron 35.0%
CTTGAAGATATTCCTAACCA+TGG - chr8.4:74667752-74667771 MS.gene37362:intron 35.0%
GAAAAGTGAATCAATCTGGA+TGG - chr8.4:74668860-74668879 MS.gene37362:intron 35.0%
GAAAGTGGAAAAGGTAAAGT+GGG - chr8.4:74667566-74667585 MS.gene37362:CDS 35.0%
GAATATCCCATCTTAGATTG+AGG + chr8.4:74670035-74670054 None:intergenic 35.0%
GTAAGTGCAGATGTTAATGT+AGG + chr8.4:74668579-74668598 None:intergenic 35.0%
GTGACTTGAAAAATGCAACA+TGG - chr8.4:74670402-74670421 MS.gene37362:intron 35.0%
GTTCCTTGAACAATGGTATA+GGG + chr8.4:74668701-74668720 None:intergenic 35.0%
TAAACATAATGCTCACCACA+TGG - chr8.4:74667186-74667205 MS.gene37362:CDS 35.0%
TATTGAGAAGACGTTCTTGA+TGG - chr8.4:74669852-74669871 MS.gene37362:CDS 35.0%
TGAACATTAATGCACTTGCA+AGG - chr8.4:74669803-74669822 MS.gene37362:CDS 35.0%
TGACCAAATGATTCATCTCT+TGG + chr8.4:74668498-74668517 None:intergenic 35.0%
TGAGTTGCAAACAAAGTTGA+TGG + chr8.4:74667780-74667799 None:intergenic 35.0%
TGCCTAATGATCTACTCAAA+AGG - chr8.4:74669938-74669957 MS.gene37362:CDS 35.0%
TGGATACCTTGAATGACTTT+AGG + chr8.4:74668765-74668784 None:intergenic 35.0%
TGTCTAAACATCAATGGTTG+TGG - chr8.4:74670065-74670084 MS.gene37362:CDS 35.0%
TTAGAAAGCTCATCATACTC+GGG + chr8.4:74670593-74670612 None:intergenic 35.0%
TTAGAGGCTTTCAAGAGATT+TGG - chr8.4:74670767-74670786 MS.gene37362:CDS 35.0%
TTCATTTCACAGAAGCCAAA+AGG - chr8.4:74666959-74666978 MS.gene37362:CDS 35.0%
TTCTGATTCACAACCATTAG+AGG - chr8.4:74670751-74670770 MS.gene37362:CDS 35.0%
TTTACAAGAGAGATGATTGC+TGG - chr8.4:74668898-74668917 MS.gene37362:intron 35.0%
TTTCAATGGGATAGTGACAT+GGG - chr8.4:74667665-74667684 MS.gene37362:CDS 35.0%
TTTGCTTTATCCTTCAAGTG+AGG - chr8.4:74670883-74670902 MS.gene37362:CDS 35.0%
! AAATATCACAGGTGGATTCA+AGG - chr8.4:74667046-74667065 MS.gene37362:CDS 35.0%
! ATGGGCTGTTATTAAGTCAT+GGG - chr8.4:74670280-74670299 MS.gene37362:CDS 35.0%
! ATTCTGAACTCCAAGCATTT+TGG - chr8.4:74670354-74670373 MS.gene37362:intron 35.0%
! CAACTACATAAGCTTTAGCA+AGG + chr8.4:74669550-74669569 None:intergenic 35.0%
! CAAGAGATTTGGAACAAAGT+TGG - chr8.4:74670778-74670797 MS.gene37362:CDS 35.0%
! CAATCTAAGATGGGATATTC+AGG - chr8.4:74670035-74670054 MS.gene37362:intron 35.0%
! CTTCATGCAGCTGTTAATTT+TGG - chr8.4:74670494-74670513 MS.gene37362:intron 35.0%
! CTTCCTTTCTTGTTATCTAG+AGG - chr8.4:74670173-74670192 MS.gene37362:CDS 35.0%
! TATGGGCTGTTATTAAGTCA+TGG - chr8.4:74670279-74670298 MS.gene37362:CDS 35.0%
! TCAACTTTGTTTGCAACTCA+TGG - chr8.4:74667780-74667799 MS.gene37362:intron 35.0%
! TGTTTTCATCCCTAGTATAG+GGG - chr8.4:74668305-74668324 MS.gene37362:CDS 35.0%
! TTTCTTGTTATCTAGAGGTG+TGG - chr8.4:74670178-74670197 MS.gene37362:CDS 35.0%
! TTTTCAATGGGATAGTGACA+TGG - chr8.4:74667664-74667683 MS.gene37362:CDS 35.0%
!! AAACAAAGTTGATGGTTCCA+TGG + chr8.4:74667772-74667791 None:intergenic 35.0%
!! AAGGTGTTGAAGCTTCAATT+TGG - chr8.4:74669522-74669541 MS.gene37362:intron 35.0%
!! ATCTTCTGCTTTTAGTTGGT+CGG + chr8.4:74670550-74670569 None:intergenic 35.0%
!! TCATCAAAGGTGTTAAACTC+TGG + chr8.4:74668618-74668637 None:intergenic 35.0%
!! TGCAGATGGATTAGAGATAT+GGG - chr8.4:74670262-74670281 MS.gene37362:CDS 35.0%
!! TTTAGGTGGTGGAAACTTAA+GGG + chr8.4:74668748-74668767 None:intergenic 35.0%
AAATGCACGCACATCATCAA+AGG + chr8.4:74668631-74668650 None:intergenic 40.0%
AAGCTAGATAGGCAACTCTA+CGG - chr8.4:74669097-74669116 MS.gene37362:intron 40.0%
AGACCAGCTTCAACAAAACA+TGG - chr8.4:74669144-74669163 MS.gene37362:CDS 40.0%
AGCTTCAACAAAACATGGGT+GGG - chr8.4:74669149-74669168 MS.gene37362:CDS 40.0%
AGTGTCTTGGTAAATGCAGA+GGG - chr8.4:74669826-74669845 MS.gene37362:CDS 40.0%
CAGATCCTAAAAGTGAGAGA+CGG - chr8.4:74668454-74668473 MS.gene37362:CDS 40.0%
CATAACATACCCCCTATACT+AGG + chr8.4:74668318-74668337 None:intergenic 40.0%
CTAATCCATCTGCAGCATAA+GGG + chr8.4:74670256-74670275 None:intergenic 40.0%
CTATAGTAGACTAATGGAGC+TGG + chr8.4:74667966-74667985 None:intergenic 40.0%
CTGCACAAAGGAAAGTGATA+TGG - chr8.4:74668244-74668263 MS.gene37362:intron 40.0%
CTTTATCCTTCAAGTGAGGA+AGG - chr8.4:74670887-74670906 MS.gene37362:CDS 40.0%
GAAGAACTGAAGACTTTACG+AGG - chr8.4:74667990-74668009 MS.gene37362:CDS 40.0%
GACAGGTAAACGTGAAGAAT+GGG - chr8.4:74668019-74668038 MS.gene37362:CDS 40.0%
GACCAGCTTCAACAAAACAT+GGG - chr8.4:74669145-74669164 MS.gene37362:CDS 40.0%
GATACCTACGGTTCAATCTT+GGG - chr8.4:74667098-74667117 MS.gene37362:CDS 40.0%
GATATTTAAACCAGCGGTGA+GGG + chr8.4:74667033-74667052 None:intergenic 40.0%
GCTTCTGATGAACAATACCT+TGG - chr8.4:74670701-74670720 MS.gene37362:intron 40.0%
GGAAAGAGATCGTTTCTTGA+AGG - chr8.4:74667587-74667606 MS.gene37362:CDS 40.0%
GGAACAATGATGAGACTCTA+AGG - chr8.4:74670828-74670847 MS.gene37362:CDS 40.0%
GGACAGTGATATTGATGCAT+AGG - chr8.4:74666988-74667007 MS.gene37362:CDS 40.0%
GTAAACGTGAAGAATGGGAA+AGG - chr8.4:74668024-74668043 MS.gene37362:CDS 40.0%
TACCTTGGACAGAGAATTGA+AGG - chr8.4:74670716-74670735 MS.gene37362:intron 40.0%
TAGAAAGCTCATCATACTCG+GGG + chr8.4:74670592-74670611 None:intergenic 40.0%
TAGCCCTATACCATTGTTCA+AGG - chr8.4:74668695-74668714 MS.gene37362:intron 40.0%
TATACCAATGGCTGATGAGT+TGG + chr8.4:74669592-74669611 None:intergenic 40.0%
TCTAAGGAATCGATATGGAC+CGG - chr8.4:74670844-74670863 MS.gene37362:CDS 40.0%
TCTAATCCATCTGCAGCATA+AGG + chr8.4:74670257-74670276 None:intergenic 40.0%
TCTTGACAGGACCTCTATAA+TGG + chr8.4:74670678-74670697 None:intergenic 40.0%
TGAAGACTTTACGAGGAGAT+GGG - chr8.4:74667997-74668016 MS.gene37362:CDS 40.0%
TGATACCTACGGTTCAATCT+TGG - chr8.4:74667097-74667116 MS.gene37362:CDS 40.0%
TGATATTTAAACCAGCGGTG+AGG + chr8.4:74667034-74667053 None:intergenic 40.0%
TGCTGAAGCAATCCATATGA+GGG + chr8.4:74670474-74670493 None:intergenic 40.0%
TGGAAAGAACTTGTAGAGGT+TGG - chr8.4:74670374-74670393 MS.gene37362:intron 40.0%
TTCATTGTGTCACGATAGTG+CGG + chr8.4:74669787-74669806 None:intergenic 40.0%
TTCGCAACCTCAATCTAAGA+TGG - chr8.4:74670025-74670044 MS.gene37362:intron 40.0%
! ACGCATTTTCTTTGCCAACA+AGG - chr8.4:74667832-74667851 MS.gene37362:intron 40.0%
! ATTAGTGCTACTAGTGCTGA+TGG - chr8.4:74667143-74667162 MS.gene37362:CDS 40.0%
! GAGACTCTAAGGAATCGATA+TGG - chr8.4:74670839-74670858 MS.gene37362:CDS 40.0%
! GCTGGTTTAAATATCACAGG+TGG - chr8.4:74667038-74667057 MS.gene37362:CDS 40.0%
! GTATAGGGGGTATGTTATGA+TGG - chr8.4:74668319-74668338 MS.gene37362:CDS 40.0%
! GTTTTCATCCCTAGTATAGG+GGG - chr8.4:74668306-74668325 MS.gene37362:CDS 40.0%
! TCGCAACCTCAATCTAAGAT+GGG - chr8.4:74670026-74670045 MS.gene37362:intron 40.0%
!! AAGTTGATGGTTCCATGGTT+AGG + chr8.4:74667767-74667786 None:intergenic 40.0%
!! ACCGCTGGTTTAAATATCAC+AGG - chr8.4:74667035-74667054 MS.gene37362:CDS 40.0%
!! CTGCAGATGGATTAGAGATA+TGG - chr8.4:74670261-74670280 MS.gene37362:CDS 40.0%
!! CTTTAGGTGGTGGAAACTTA+AGG + chr8.4:74668749-74668768 None:intergenic 40.0%
!! TGATGGAACTTTGAAGCCAT+TGG - chr8.4:74669424-74669443 MS.gene37362:CDS 40.0%
!! TGCTTTTAGTTGGTCGGTTA+AGG + chr8.4:74670544-74670563 None:intergenic 40.0%
!! TTAGGTGGTGGAAACTTAAG+GGG + chr8.4:74668747-74668766 None:intergenic 40.0%
!!! GCTAAGCTAGCTTTTCTATC+AGG + chr8.4:74668086-74668105 None:intergenic 40.0%
!!! GTTTTGTTGAAGCTGGTCTT+TGG + chr8.4:74669143-74669162 None:intergenic 40.0%
AAGGAACTCCTCAGAACTGA+TGG - chr8.4:74668714-74668733 MS.gene37362:intron 45.0%
AAGGGTAGTCCTCTATCAGA+AGG + chr8.4:74670238-74670257 None:intergenic 45.0%
AATGGAGCTGGTGTTTCACT+TGG + chr8.4:74667954-74667973 None:intergenic 45.0%
ACACTTGCACTACCCTCATA+TGG - chr8.4:74670459-74670478 MS.gene37362:intron 45.0%
ACAGAAGCCAAAAGGTGAAG+GGG - chr8.4:74666967-74666986 MS.gene37362:CDS 45.0%
AGAAAGCTCATCATACTCGG+GGG + chr8.4:74670591-74670610 None:intergenic 45.0%
ATCACCAACTCATCAGCCAT+TGG - chr8.4:74669585-74669604 MS.gene37362:intron 45.0%
CACAGAAGCCAAAAGGTGAA+GGG - chr8.4:74666966-74666985 MS.gene37362:CDS 45.0%
CACCAAAGAGCAAGCTAGAT+AGG - chr8.4:74669086-74669105 MS.gene37362:intron 45.0%
CACCTTCAATTCTCTGTCCA+AGG + chr8.4:74670721-74670740 None:intergenic 45.0%
CAGCTTCAACAAAACATGGG+TGG - chr8.4:74669148-74669167 MS.gene37362:CDS 45.0%
CCACCACCTAAAGTCATTCA+AGG - chr8.4:74668756-74668775 MS.gene37362:CDS 45.0%
CCTTGAATGACTTTAGGTGG+TGG + chr8.4:74668759-74668778 None:intergenic 45.0%
CTGAAGACTTTACGAGGAGA+TGG - chr8.4:74667996-74668015 MS.gene37362:CDS 45.0%
CTGAGGAGTTCCTTGAACAA+TGG + chr8.4:74668708-74668727 None:intergenic 45.0%
GAGTGTCTTGGTAAATGCAG+AGG - chr8.4:74669825-74669844 MS.gene37362:CDS 45.0%
GATAGTGACATGGGAATTCC+AGG - chr8.4:74667674-74667693 MS.gene37362:CDS 45.0%
GGACAGGTAAACGTGAAGAA+TGG - chr8.4:74668018-74668037 MS.gene37362:CDS 45.0%
GTCAATCCTTCCTCACTTGA+AGG + chr8.4:74670896-74670915 None:intergenic 45.0%
GTGCTGAAGCAATCCATATG+AGG + chr8.4:74670475-74670494 None:intergenic 45.0%
GTGTTGGATCCTCCAATAAC+GGG + chr8.4:74668113-74668132 None:intergenic 45.0%
TCACAGAAGCCAAAAGGTGA+AGG - chr8.4:74666965-74666984 MS.gene37362:CDS 45.0%
TTAAGGATGTACCCTCCGTA+CGG + chr8.4:74670527-74670546 None:intergenic 45.0%
TTGGACAATATCCGTACGGA+GGG - chr8.4:74670513-74670532 MS.gene37362:intron 45.0%
TTTGGACAATATCCGTACGG+AGG - chr8.4:74670512-74670531 MS.gene37362:intron 45.0%
! ACAGGTGGATTCAAGGTTCT+TGG - chr8.4:74667053-74667072 MS.gene37362:CDS 45.0%
! ATCTAGAGGTGTGGCTCTTA+AGG - chr8.4:74670187-74670206 MS.gene37362:CDS 45.0%
! CATCAGAAGCATGTCTTGAC+AGG + chr8.4:74670691-74670710 None:intergenic 45.0%
! CTGGTCTTTGGTTATTGTGC+TGG + chr8.4:74669131-74669150 None:intergenic 45.0%
! GAACTTGTAGAGGTTGGTCA+CGG - chr8.4:74670380-74670399 MS.gene37362:intron 45.0%
! GATGTGCGTGCATTTTACGA+GGG - chr8.4:74668636-74668655 MS.gene37362:intron 45.0%
! GATTGGGTTTTCACTGAGCA+AGG - chr8.4:74669913-74669932 MS.gene37362:CDS 45.0%
! GGTGTTGGATCCTCCAATAA+CGG + chr8.4:74668114-74668133 None:intergenic 45.0%
! TGATGTGCGTGCATTTTACG+AGG - chr8.4:74668635-74668654 MS.gene37362:intron 45.0%
! TTTCTTAGCTGGTTTCCTGC+CGG + chr8.4:74668162-74668181 None:intergenic 45.0%
!! AATGGCTGATGAGTTGGTGA+TGG + chr8.4:74669586-74669605 None:intergenic 45.0%
!! CACCCATGTTTTGTTGAAGC+TGG + chr8.4:74669150-74669169 None:intergenic 45.0%
!! CTATCTAGCTTGCTCTTTGG+TGG + chr8.4:74669088-74669107 None:intergenic 45.0%
!! TGCCTATCTAGCTTGCTCTT+TGG + chr8.4:74669091-74669110 None:intergenic 45.0%
AAGCTATCAGCCTGAGGATG+TGG + chr8.4:74669467-74669486 None:intergenic 50.0%
AAGGATCCTACTTCCCCACA+CGG - chr8.4:74670206-74670225 MS.gene37362:CDS 50.0%
ACTTTACGAGGAGATGGGAC+AGG - chr8.4:74668002-74668021 MS.gene37362:CDS 50.0%
AGCTATCAGCCTGAGGATGT+GGG + chr8.4:74669466-74669485 None:intergenic 50.0%
AGCTTAGCTCGTCCCGTTAT+TGG - chr8.4:74668098-74668117 MS.gene37362:CDS 50.0%
AGTCCTCTATCAGAAGGCGA+AGG + chr8.4:74670232-74670251 None:intergenic 50.0%
CACTGTCCAGCTCCTAGAAT+CGG + chr8.4:74667629-74667648 None:intergenic 50.0%
CATCCTCAGGCTGATAGCTT+TGG - chr8.4:74669467-74669486 MS.gene37362:intron 50.0%
CTGCTTAGCTCAATGGCCAA+TGG + chr8.4:74669443-74669462 None:intergenic 50.0%
GACTACCCTTATGCTGCAGA+TGG - chr8.4:74670248-74670267 MS.gene37362:CDS 50.0%
GCTTCAACACCTTCACTTGC+AGG + chr8.4:74669515-74669534 None:intergenic 50.0%
GGCAGGAAACCAGCTAAGAA+AGG - chr8.4:74668161-74668180 MS.gene37362:CDS 50.0%
GTGCTTCACCATCAGTTCTG+AGG + chr8.4:74668725-74668744 None:intergenic 50.0%
TACTCGGGGGATCCTTTCTT+AGG + chr8.4:74670578-74670597 None:intergenic 50.0%
TCAACCTGAGAGCCACTGAA+CGG + chr8.4:74667124-74667143 None:intergenic 50.0%
TTAGCTCGTCCCGTTATTGG+AGG - chr8.4:74668101-74668120 MS.gene37362:CDS 50.0%
TTCAATCTTGGGCCGTTCAG+TGG - chr8.4:74667109-74667128 MS.gene37362:CDS 50.0%
! ATGTGGGCTGCTTAGCTCAA+TGG + chr8.4:74669450-74669469 None:intergenic 50.0%
! TCACTGTCCCCTTCACCTTT+TGG + chr8.4:74666977-74666996 None:intergenic 50.0%
!! GAGGAAGGATTGACTTGCAG+AGG - chr8.4:74670902-74670921 MS.gene37362:CDS 50.0%
!! TCGCTCCGTCTCTCACTTTT+AGG + chr8.4:74668462-74668481 None:intergenic 50.0%
!! TGCACTTGCAAGGAGTGTCT+TGG - chr8.4:74669813-74669832 MS.gene37362:CDS 50.0%
ACACCTTGCCTTACCCTCGA+AGG - chr8.4:74668129-74668148 MS.gene37362:CDS 55.0%
ACCTTGCCTTACCCTCGAAG+GGG - chr8.4:74668131-74668150 MS.gene37362:CDS 55.0%
ACGGCCCAAGATTGAACCGT+AGG + chr8.4:74667105-74667124 None:intergenic 55.0%
CACCTTGCCTTACCCTCGAA+GGG - chr8.4:74668130-74668149 MS.gene37362:CDS 55.0%
GGACCAAAGCTATCAGCCTG+AGG + chr8.4:74669473-74669492 None:intergenic 55.0%
TCCAGCTCCTAGAATCGGTG+CGG + chr8.4:74667624-74667643 None:intergenic 55.0%
TCGAGGGTAAGGCAAGGTGT+TGG + chr8.4:74668129-74668148 None:intergenic 55.0%
! GTGCGTGCATTTTACGAGGG+TGG - chr8.4:74668639-74668658 MS.gene37362:intron 55.0%
!! GTTACCTCCGCACCGATTCT+AGG - chr8.4:74667614-74667633 MS.gene37362:CDS 55.0%
AGCTCCTAGAATCGGTGCGG+AGG + chr8.4:74667621-74667640 None:intergenic 60.0%
ATCAGAAGGCGAAGGCCGTG+TGG + chr8.4:74670224-74670243 None:intergenic 60.0%
CCTTGCCTTACCCTCGAAGG+GGG - chr8.4:74668132-74668151 MS.gene37362:CDS 60.0%
CGGCCTTCGCCTTCTGATAG+AGG - chr8.4:74670226-74670245 MS.gene37362:CDS 60.0%
GATATCAACGCCCTCACCGC+TGG - chr8.4:74667020-74667039 MS.gene37362:CDS 60.0%
GCTAAGCAGCCCACATCCTC+AGG - chr8.4:74669454-74669473 MS.gene37362:intron 60.0%
GTTCTCCCCCTTCGAGGGTA+AGG + chr8.4:74668140-74668159 None:intergenic 60.0%
TACCCTCGAAGGGGGAGAAC+CGG - chr8.4:74668140-74668159 MS.gene37362:CDS 60.0%
TCAGAAGGCGAAGGCCGTGT+GGG + chr8.4:74670223-74670242 None:intergenic 60.0%
!! TCCGCACCGATTCTAGGAGC+TGG - chr8.4:74667620-74667639 MS.gene37362:CDS 60.0%
CAGAAGGCGAAGGCCGTGTG+GGG + chr8.4:74670222-74670241 None:intergenic 65.0%
CCCCCTTCGAGGGTAAGGCA+AGG + chr8.4:74668135-74668154 None:intergenic 65.0%
CGAAGGCCGTGTGGGGAAGT+AGG + chr8.4:74670215-74670234 None:intergenic 65.0%
TGGGCCGTTCAGTGGCTCTC+AGG - chr8.4:74667117-74667136 MS.gene37362:CDS 65.0%
!! TGCCGGTTCTCCCCCTTCGA+GGG + chr8.4:74668145-74668164 None:intergenic 65.0%
CTCGAAGGGGGAGAACCGGC+AGG - chr8.4:74668144-74668163 MS.gene37362:CDS 70.0%
!! CTGCCGGTTCTCCCCCTTCG+AGG + chr8.4:74668146-74668165 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 74666954 74670949 74666954 ID=MS.gene37362
chr8.4 mRNA 74666954 74670949 74666954 ID=MS.gene37362.t1;Parent=MS.gene37362
chr8.4 exon 74670739 74670949 74670739 ID=MS.gene37362.t1.exon1;Parent=MS.gene37362.t1
chr8.4 CDS 74670739 74670949 74670739 ID=cds.MS.gene37362.t1;Parent=MS.gene37362.t1
chr8.4 exon 74670050 74670336 74670050 ID=MS.gene37362.t1.exon2;Parent=MS.gene37362.t1
chr8.4 CDS 74670050 74670336 74670050 ID=cds.MS.gene37362.t1;Parent=MS.gene37362.t1
chr8.4 exon 74669721 74669961 74669721 ID=MS.gene37362.t1.exon3;Parent=MS.gene37362.t1
chr8.4 CDS 74669721 74669961 74669721 ID=cds.MS.gene37362.t1;Parent=MS.gene37362.t1
chr8.4 exon 74669126 74669446 74669126 ID=MS.gene37362.t1.exon4;Parent=MS.gene37362.t1
chr8.4 CDS 74669126 74669446 74669126 ID=cds.MS.gene37362.t1;Parent=MS.gene37362.t1
chr8.4 exon 74668952 74669037 74668952 ID=MS.gene37362.t1.exon5;Parent=MS.gene37362.t1
chr8.4 CDS 74668952 74669037 74668952 ID=cds.MS.gene37362.t1;Parent=MS.gene37362.t1
chr8.4 exon 74668717 74668824 74668717 ID=MS.gene37362.t1.exon6;Parent=MS.gene37362.t1
chr8.4 CDS 74668717 74668824 74668717 ID=cds.MS.gene37362.t1;Parent=MS.gene37362.t1
chr8.4 exon 74668297 74668601 74668297 ID=MS.gene37362.t1.exon7;Parent=MS.gene37362.t1
chr8.4 CDS 74668297 74668601 74668297 ID=cds.MS.gene37362.t1;Parent=MS.gene37362.t1
chr8.4 exon 74667944 74668207 74667944 ID=MS.gene37362.t1.exon8;Parent=MS.gene37362.t1
chr8.4 CDS 74667944 74668207 74667944 ID=cds.MS.gene37362.t1;Parent=MS.gene37362.t1
chr8.4 exon 74666954 74667710 74666954 ID=MS.gene37362.t1.exon9;Parent=MS.gene37362.t1
chr8.4 CDS 74666954 74667710 74666954 ID=cds.MS.gene37362.t1;Parent=MS.gene37362.t1
Gene Sequence

>MS.gene37362

ATGTTTTCATTTCACAGAAGCCAAAAGGTGAAGGGGACAGTGATATTGATGCATAGGAATGTGTTGGATATCAACGCCCTCACCGCTGGTTTAAATATCACAGGTGGATTCAAGGTTCTTGGTAATCTCACTAGCTCTATATTTGATACCTACGGTTCAATCTTGGGCCGTTCAGTGGCTCTCAGGTTGATTAGTGCTACTAGTGCTGATGGTAATTACTTTTTTCTTTTACTAAACATAATGCTCACCACATGGATTTATACTCATAACTCATTGTTATAAAATCTCTTTCTTTTTTGATACAAATATACTGTTACACTTCAATTTGCGAATATACAGTAAAAGTTCTCATATTTTAAACTCACAATTGGTTTCTATGTTTAGAGAACGTCAAATATAAACATGTGGTTCAAAGATAGACTTTACTATTTTTTTTACTAAACTTTAATAAAATATTACACATGTTCTTCATTTTTTACAATTACTATAATTTCTTTAAAAAAATTGTTTTAAGAGTATTTGTTAATTTTTCATTTGAGAATTATCATAACTTTTTATTTTTTTTTATAAATCTTTACTGAAATTGAAAAACAAACTTGTGACATATTTGTAGAAAGTGGAAAAGGTAAAGTGGGAAAGAGATCGTTTCTTGAAGGTTTTGTTACCTCCGCACCGATTCTAGGAGCTGGACAGTGTGCATACAAAGTTCATTTTCAATGGGATAGTGACATGGGAATTCCAGGAGCATTTTATATTGAGAATTTCATGCTAGGAGAATTTTTTCTTGTAAGTTTAACACTTGAAGATATTCCTAACCATGGAACCATCAACTTTGTTTGCAACTCATGGATTTACAATTGTCGAAAGTACAAAACTGAACGCATTTTCTTTGCCAACAAGGTAATTATGAAAAATATCATATTTATCTTACATCTTAAATATCTTACATTTTCCAAAATTTGACACTATTAAGTAAATATAAACATAGACATATCTTCCAAGTGAAACACCAGCTCCATTAGTCTACTATAGACAAGAAGAACTGAAGACTTTACGAGGAGATGGGACAGGTAAACGTGAAGAATGGGAAAGGATCTATGACTATGATGTCTACAATGATGTGGGTGATCCTGATAGAAAAGCTAGCTTAGCTCGTCCCGTTATTGGAGGATCCAACACCTTGCCTTACCCTCGAAGGGGGAGAACCGGCAGGAAACCAGCTAAGAAAGGTTATAAACTTTTATATTCTATTTAAACGATCAAGTTAGTATATTATGTTTTAAGGTATTTCTGCACAAAGGAAAGTGATATGGTACAACTATATGAAATATTAATGTAACTTTATAGTTAATGTTTTCATCCCTAGTATAGGGGGTATGTTATGATGGCATTATTTTTTTGGTTGAAAATGTGTCTTTATGTTGATCAAAATGTTTCATTTGTTTATGATTCTAAAGTCATTCTTCTTGCTAATGCATATTTTGCTATTTTGTATTTGAGCAGATCCTAAAAGTGAGAGACGGAGCGAGTATATTTATCTTCCAAGAGATGAATCATTTGGTCACTTGAAGTCATCAGACTTTCTTGTTTACATACTTAAATCAGTATCTCAGAATGTCATACCTACATTAACATCTGCACTTACATTACAATTCAACAAGCCAGAGTTTAACACCTTTGATGATGTGCGTGCATTTTACGAGGGTGGAATTAAACTGCATACTAATGAACTTAGCAAACTTAGCCCTATACCATTGTTCAAGGAACTCCTCAGAACTGATGGTGAAGCACCCCTTAAGTTTCCACCACCTAAAGTCATTCAAGGTATCCATTAGAAACACATTTTTAGTCATGCAAAATTTGGAAAGAAATTAATTTCATAGATCTTTTATACTTCTCTTATTTTGAAAAGTGAATCAATCTGGATGGATGACTGATGAAGAATTTACAAGAGAGATGATTGCTGGTGTGAATCCACACATCATCAAAAGAATTCAGGTAAACTTAATAGTTTAATAATATAATTGTTATGCAAACACCAAAACTAAAATAAGAATATTGTATCCATTTTTCATCCTAGTTTTTTAATTCTTAACCTTATTATTGCTTGATATATCTAATGTAGGAATTTCCACCAAAGAGCAAGCTAGATAGGCAACTCTACGGTGATAATACCAGCACAATAACCAAAGACCAGCTTCAACAAAACATGGGTGGGATCACTGTTGAACAAGTAATTACAAAATTTAACATCAATACTCAAAATAAATAATTTTGTTATTGTTTTGCAAAATTGTTTCATTTTCATTCAATTTATTGCAATGACTAAATTATATATTTTTTAATAGGCTATCGAAACCAACAAATTGTACATACTTGATCACCATGACTCAATATATCCATATCTGAGGAAAATAAATGCAGCTGATACAAAGGCATATGCTACGAGAACCTTCCTTTTCTTACAAAATGATGGAACTTTGAAGCCATTGGCCATTGAGCTAAGCAGCCCACATCCTCAGGCTGATAGCTTTGGTCCTGTTAGTGATATTTACTTTCCTGCAAGTGAAGGTGTTGAAGCTTCAATTTGGCTCCTTGCTAAAGCTTATGTAGTTGTAAACGACTCGTGCCATCACCAACTCATCAGCCATTGGTATAAATTCAATTGACAAGATTATAGACTCAAACATACTTCATATACCATTGAGTTATACATTATATTAATATCTATATGTGTGACAGGTTGAACACTCATGCTGTTGTTGAGCCATTCATCATAGCAACAAATAGGCATCTTAGTGTGGTTCATCCTATTCATAAGCTTTTACTTCCGCACTATCGTGACACAATGAACATTAATGCACTTGCAAGGAGTGTCTTGGTAAATGCAGAGGGTGTTATTGAGAAGACGTTCTTGATGGGAAGTTATTCTCTAGAATTGTCTGCTGTATTATATAAGGATTGGGTTTTCACTGAGCAAGGTTTGCCTAATGATCTACTCAAAAGGTAACCTTACAAAACATTAGATCCTAGACATATATTCAGTAGTTAAAAAGAGGATTGAAAATTTGTTCGCAACCTCAATCTAAGATGGGATATTCAGGTTTTTAATGTCTAAACATCAATGGTTGTGGTCGCATCAACTGTATTTTGCCGCAATTTTAAACTTTCCGTTTATAATATTGATATCAAAAGTTTTTATTTTGATATTAATGATATCTTCCTTTCTTGTTATCTAGAGGTGTGGCTCTTAAGGATCCTACTTCCCCACACGGCCTTCGCCTTCTGATAGAGGACTACCCTTATGCTGCAGATGGATTAGAGATATGGGCTGTTATTAAGTCATGGGTTGAAGAATATGTGAATTTCTACTACAAGTCAGATGTAAATATTGCACAAGATTCTGAACTCCAAGCATTTTGGAAAGAACTTGTAGAGGTTGGTCACGGTGACTTGAAAAATGCAACATGGTGGGTTAATATGCAAACTCGCACAGAGTTGATTGACACTTGCACTACCCTCATATGGATTGCTTCAGCACTTCATGCAGCTGTTAATTTTGGACAATATCCGTACGGAGGGTACATCCTTAACCGACCAACTAAAAGCAGAAGATTAATGCCTAAGAAAGGATCCCCCGAGTATGATGAGCTTTCTAAAAACTATCAAAAGGCGTTTTTGAGAACAATCACACCAAAAAATGACACCCTAATTGACTTGACCATTATAGAGGTCCTGTCAAGACATGCTTCTGATGAACAATACCTTGGACAGAGAATTGAAGGTGATCTTTGGACTTCTGATTCACAACCATTAGAGGCTTTCAAGAGATTTGGAACAAAGTTGGCTGAAATTGAACAAAAACTCATTCAAAGGAACAATGATGAGACTCTAAGGAATCGATATGGACCGGTAAAGATGCCGTATACTTTGCTTTATCCTTCAAGTGAGGAAGGATTGACTTGCAGAGGCATTCCAAATAGTATCTCCATCTAA

Protein sequence

>MS.gene37362.t1

MFSFHRSQKVKGTVILMHRNVLDINALTAGLNITGGFKVLGNLTSSIFDTYGSILGRSVALRLISATSADESGKGKVGKRSFLEGFVTSAPILGAGQCAYKVHFQWDSDMGIPGAFYIENFMLGEFFLVSLTLEDIPNHGTINFVCNSWIYNCRKYKTERIFFANKTYLPSETPAPLVYYRQEELKTLRGDGTGKREEWERIYDYDVYNDVGDPDRKASLARPVIGGSNTLPYPRRGRTGRKPAKKDPKSERRSEYIYLPRDESFGHLKSSDFLVYILKSVSQNVIPTLTSALTLQFNKPEFNTFDDVRAFYEGGIKLHTNELSKLSPIPLFKELLRTDGEAPLKFPPPKVIQVNQSGWMTDEEFTREMIAGVNPHIIKRIQEFPPKSKLDRQLYGDNTSTITKDQLQQNMGGITVEQAIETNKLYILDHHDSIYPYLRKINAADTKAYATRTFLFLQNDGTLKPLAIELSSPHPQADSFGPVSDIYFPASEGVEASIWLLAKAYVVVNDSCHHQLISHWLNTHAVVEPFIIATNRHLSVVHPIHKLLLPHYRDTMNINALARSVLVNAEGVIEKTFLMGSYSLELSAVLYKDWVFTEQGLPNDLLKRGVALKDPTSPHGLRLLIEDYPYAADGLEIWAVIKSWVEEYVNFYYKSDVNIAQDSELQAFWKELVEVGHGDLKNATWWVNMQTRTELIDTCTTLIWIASALHAAVNFGQYPYGGYILNRPTKSRRLMPKKGSPEYDELSKNYQKAFLRTITPKNDTLIDLTIIEVLSRHASDEQYLGQRIEGDLWTSDSQPLEAFKRFGTKLAEIEQKLIQRNNDETLRNRYGPVKMPYTLLYPSSEEGLTCRGIPNSISI