Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37462.t1 | XP_013461810.1 | 94.8 | 707 | 33 | 1 | 1 | 703 | 1 | 707 | 0.00E+00 | 1214.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37462.t1 | Q5UNY4 | 33.2 | 373 | 211 | 10 | 315 | 667 | 135 | 489 | 9.4e-50 | 199.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37462.t1 | A0A072VCH4 | 94.8 | 707 | 33 | 1 | 1 | 703 | 1 | 707 | 0.0e+00 | 1214.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050937 | MS.gene37462 | 0.823614 | 1.26E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37462.t1 | MTR_3g103410 | 96.181 | 707 | 23 | 1 | 1 | 703 | 1 | 707 | 0.0 | 1416 |
| MS.gene37462.t1 | MTR_5g045160 | 71.983 | 721 | 124 | 6 | 3 | 703 | 2 | 664 | 0.0 | 1005 |
| MS.gene37462.t1 | MTR_6g445440 | 68.340 | 717 | 127 | 9 | 4 | 703 | 3 | 636 | 0.0 | 951 |
| MS.gene37462.t1 | MTR_5g045130 | 70.973 | 565 | 93 | 6 | 143 | 703 | 2 | 499 | 0.0 | 781 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37462.t1 | AT5G13210 | 54.014 | 735 | 241 | 8 | 3 | 703 | 2 | 673 | 0.0 | 772 |
| MS.gene37462.t1 | AT5G43400 | 61.470 | 449 | 133 | 5 | 283 | 703 | 219 | 655 | 0.0 | 553 |
| MS.gene37462.t1 | AT5G43400 | 52.941 | 187 | 80 | 2 | 1 | 179 | 1 | 187 | 5.88e-63 | 222 |
| MS.gene37462.t1 | AT3G24780 | 62.830 | 417 | 119 | 2 | 277 | 657 | 287 | 703 | 0.0 | 546 |
| MS.gene37462.t1 | AT3G24780 | 67.742 | 124 | 40 | 0 | 41 | 164 | 107 | 230 | 2.10e-52 | 193 |
| MS.gene37462.t1 | AT5G43390 | 59.060 | 447 | 145 | 6 | 283 | 703 | 209 | 643 | 2.09e-175 | 516 |
| MS.gene37462.t1 | AT5G43390 | 46.729 | 214 | 108 | 2 | 1 | 212 | 1 | 210 | 1.25e-60 | 215 |
Find 207 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGATTCCATTCTTGTTTC+TGG | -0.005923 | 3.4:+91003138 | None:intergenic |
| GTCCCTTCCCTTGCTGAATT+TGG | 0.166800 | 3.4:-91003224 | MS.gene37462:CDS |
| AAAGAGGTTTGAGAAGTATT+TGG | 0.190204 | 3.4:-91002319 | MS.gene37462:CDS |
| TCATGACATTATTCGGTCTT+TGG | 0.197358 | 3.4:-91002247 | MS.gene37462:CDS |
| GCCTCAGCTTCATGTGATTC+AGG | 0.225556 | 3.4:-91002010 | MS.gene37462:CDS |
| AGTCTTCGGAGGAGAGTTTC+GGG | 0.227712 | 3.4:+91003398 | None:intergenic |
| ATATTGGATGTCGCTGTAAA+TGG | 0.230642 | 3.4:-91001904 | MS.gene37462:CDS |
| GGAGGTTACAGACAAGTTTA+AGG | 0.239461 | 3.4:+91003342 | None:intergenic |
| GAATCTGCTGAAATTGTTCT+TGG | 0.240842 | 3.4:-91001647 | MS.gene37462:CDS |
| TGCTTCCTCATGACATTATT+CGG | 0.263127 | 3.4:-91002254 | MS.gene37462:CDS |
| GCTTCTATGCCGCTGCTCTT+TGG | 0.266382 | 3.4:-91003283 | MS.gene37462:CDS |
| GCTTTCTGAGTGGCCGGCAC+TGG | 0.266848 | 3.4:+91001697 | None:intergenic |
| AGAAGACGGTAAAGGATTTC+TGG | 0.284365 | 3.4:+91003185 | None:intergenic |
| CGGTTGACTCTTCATTTGAT+AGG | 0.290913 | 3.4:-91002590 | MS.gene37462:CDS |
| CATGACATTATTCGGTCTTT+GGG | 0.290932 | 3.4:-91002246 | MS.gene37462:CDS |
| CTTTCTGAGTGGCCGGCACT+GGG | 0.294884 | 3.4:+91001698 | None:intergenic |
| CTTGCTGTGTGTGATGTCTC+TGG | 0.301456 | 3.4:-91002138 | MS.gene37462:CDS |
| GACATTAGAAGCCAGGGTTT+TGG | 0.301639 | 3.4:+91003244 | None:intergenic |
| AGTTGCCTGAGGTGTTTATT+GGG | 0.305202 | 3.4:-91002428 | MS.gene37462:CDS |
| GAGTTGCCTGAGGTGTTTAT+TGG | 0.306469 | 3.4:-91002429 | MS.gene37462:CDS |
| AAGGGTGGTGAGTGGGTTAT+AGG | 0.313785 | 3.4:+91003361 | None:intergenic |
| AAGTCTTCGGAGGAGAGTTT+CGG | 0.342754 | 3.4:+91003397 | None:intergenic |
| TGGAGATGGTGGAGAGGTGG+CGG | 0.346229 | 3.4:-91002220 | MS.gene37462:CDS |
| ATCAAGCATCTGCAAACTCT+TGG | 0.358801 | 3.4:-91001822 | MS.gene37462:CDS |
| GCCTTCACGATCGGACTTGC+CGG | 0.365526 | 3.4:+91003304 | None:intergenic |
| AGGAGGCGCATTATGCTTAT+AGG | 0.369882 | 3.4:-91002503 | MS.gene37462:CDS |
| TCAAAATCAAAATCCCGTTT+TGG | 0.372838 | 3.4:-91003080 | MS.gene37462:CDS |
| GCTATGGAAGCTGCAATTGC+TGG | 0.375178 | 3.4:-91001562 | MS.gene37462:CDS |
| TTAGTGTCATTGGTGGGTTT+TGG | 0.376605 | 3.4:+91003501 | None:intergenic |
| GAAGTACCGAAAAGGGGTTT+TGG | 0.380728 | 3.4:+91002979 | None:intergenic |
| ATATGCGATCAAATACCTTC+TGG | 0.382272 | 3.4:+91001923 | None:intergenic |
| GGGTGGAGATGGTGGAGAGG+TGG | 0.389441 | 3.4:-91002223 | MS.gene37462:CDS |
| GGAAATTGATCCCTTACAAC+AGG | 0.401888 | 3.4:-91002395 | MS.gene37462:CDS |
| GAAGGTATTTGATCGCATAT+TGG | 0.402007 | 3.4:-91001920 | MS.gene37462:CDS |
| GGTGCCGTTGAGGAAGGTTT+TGG | 0.404840 | 3.4:-91002451 | MS.gene37462:CDS |
| ACAATCTTCTTCTCTTTCTT+CGG | 0.408408 | 3.4:+91002774 | None:intergenic |
| GATGTCTCTGGGAGTATGAC+TGG | 0.411259 | 3.4:-91002126 | MS.gene37462:CDS |
| GGAGGCGCATTATGCTTATA+GGG | 0.411872 | 3.4:-91002502 | MS.gene37462:CDS |
| GTTTGTGAGGAAGATGGATT+GGG | 0.416637 | 3.4:-91001962 | MS.gene37462:CDS |
| AAATTAGTCTTGCTGCGAAA+TGG | 0.427219 | 3.4:-91002620 | MS.gene37462:CDS |
| ACTAGGAAGTATAGAGAGAA+AGG | 0.427301 | 3.4:-91001778 | MS.gene37462:CDS |
| CACAACTAGTTTCTGATACT+CGG | 0.428515 | 3.4:+91001537 | None:intergenic |
| AGTTTGTGAGGAAGATGGAT+TGG | 0.430138 | 3.4:-91001963 | MS.gene37462:CDS |
| TAATCGTGAAGTACCGAAAA+GGG | 0.430475 | 3.4:+91002972 | None:intergenic |
| TATGGACGTGTGTGTGGCAT+TGG | 0.437885 | 3.4:-91002097 | MS.gene37462:CDS |
| TGCTGCGAAATGGTGTCCTT+CGG | 0.445450 | 3.4:-91002610 | MS.gene37462:CDS |
| ACAGACGCAACCCTGTTGTA+AGG | 0.447450 | 3.4:+91002384 | None:intergenic |
| GAGGGATGAGGCGAGGGCTG+CGG | 0.448398 | 3.4:-91002910 | MS.gene37462:CDS |
| GGGCTGCGGCGAGGGCTAAG+AGG | 0.455206 | 3.4:-91002896 | MS.gene37462:CDS |
| ACAACTAGTTTCTGATACTC+GGG | 0.457651 | 3.4:+91001538 | None:intergenic |
| GACAGAGTTTGTGAGGAAGA+TGG | 0.458990 | 3.4:-91001968 | MS.gene37462:CDS |
| TATACTTCCTAGTGATTGCT+TGG | 0.460791 | 3.4:+91001788 | None:intergenic |
| TATTGGATGTCGCTGTAAAT+GGG | 0.461124 | 3.4:-91001903 | MS.gene37462:CDS |
| TGAGGCGAGGGCTGCGGCGA+GGG | 0.461273 | 3.4:-91002904 | MS.gene37462:CDS |
| CTCCGCGGCATCCGTGGTAC+CGG | 0.461336 | 3.4:-91003323 | MS.gene37462:CDS |
| CAGGGTTGCGTCTGTGGCCA+TGG | 0.461754 | 3.4:-91002376 | MS.gene37462:CDS |
| TATTTGGAGGATGTGAAAGC+GGG | 0.463495 | 3.4:-91002303 | MS.gene37462:CDS |
| CACTCAGAAAGCAGTGGCGC+TGG | 0.468283 | 3.4:-91001686 | MS.gene37462:CDS |
| GTGTGTGGCATTGGGATTGT+TGG | 0.469061 | 3.4:-91002088 | MS.gene37462:CDS |
| TCAAGCATCTGCAAACTCTT+GGG | 0.470390 | 3.4:-91001821 | MS.gene37462:CDS |
| GAGGTTACAGACAAGTTTAA+GGG | 0.471004 | 3.4:+91003343 | None:intergenic |
| GAAGACGGTAAAGGATTTCT+GGG | 0.472411 | 3.4:+91003186 | None:intergenic |
| GTGGATGATTTGCTCAAGAA+AGG | 0.473549 | 3.4:-91002177 | MS.gene37462:CDS |
| GGTTGACTCTTCATTTGATA+GGG | 0.474183 | 3.4:-91002589 | MS.gene37462:CDS |
| CTTCCTCACAAACTCTGTCT+TGG | 0.475579 | 3.4:+91001972 | None:intergenic |
| AAAATTCTATCAAGAACAAT+GGG | 0.475978 | 3.4:-91003051 | MS.gene37462:CDS |
| TTGCTGTGTGTGATGTCTCT+GGG | 0.479823 | 3.4:-91002137 | MS.gene37462:CDS |
| GAAAGAGAAGAAGATTGTAT+TGG | 0.481046 | 3.4:-91002769 | MS.gene37462:CDS |
| AGGAGGATCAGATGATTAAG+AGG | 0.485373 | 3.4:-91001873 | MS.gene37462:CDS |
| GAGGTTTGAGAAGTATTTGG+AGG | 0.487381 | 3.4:-91002316 | MS.gene37462:CDS |
| GGCTGCGGCGAGGGCTAAGA+GGG | 0.487543 | 3.4:-91002895 | MS.gene37462:CDS |
| TCACCAACATTTCTCTCTAC+AGG | 0.488275 | 3.4:-91003467 | MS.gene37462:CDS |
| TGGGCCAACGAGTGTGGTGG+CGG | 0.489398 | 3.4:+91003610 | None:intergenic |
| CTTCATTGTCTGTCAGCAGA+TGG | 0.492060 | 3.4:+91001605 | None:intergenic |
| GGGAAGGGACATTAGAAGCC+AGG | 0.492480 | 3.4:+91003237 | None:intergenic |
| AAGTATAGAGAGAAAGGGTA+TGG | 0.494035 | 3.4:-91001772 | MS.gene37462:CDS |
| CCTCAGCTTCATGTGATTCA+GGG | 0.494334 | 3.4:-91002009 | MS.gene37462:CDS |
| GTATCAGAAACTAGTTGTGC+TGG | 0.495109 | 3.4:-91001533 | MS.gene37462:CDS |
| ATAATCGTGAAGTACCGAAA+AGG | 0.495430 | 3.4:+91002971 | None:intergenic |
| CTGAATTGTGTGAGGAACCT+TGG | 0.496491 | 3.4:-91002062 | MS.gene37462:CDS |
| ATAGGGTTCGTGATCGTTTG+AGG | 0.496887 | 3.4:-91002485 | MS.gene37462:CDS |
| TTTCTGGATCTTGCGTATGT+TGG | 0.499395 | 3.4:+91003154 | None:intergenic |
| CTCGATGGCGACCCCAGTGC+CGG | 0.502159 | 3.4:-91001710 | MS.gene37462:CDS |
| ATTATGAGAAGAAAGAGAAG+AGG | 0.504648 | 3.4:-91002821 | MS.gene37462:CDS |
| AGAGATTGCGGTGAGGGATG+AGG | 0.504746 | 3.4:-91002922 | MS.gene37462:CDS |
| GAGTATGACTGGGATCCCTA+TGG | 0.505208 | 3.4:-91002115 | MS.gene37462:CDS |
| GCCAACGAGTGTGGTGGCGG+TGG | 0.506505 | 3.4:+91003613 | None:intergenic |
| AAAGCAGTGGCGCTGGTAAG+TGG | 0.507190 | 3.4:-91001679 | MS.gene37462:CDS |
| TGCGGTGAGGGATGAGGCGA+GGG | 0.508537 | 3.4:-91002916 | MS.gene37462:CDS |
| TTACAACAGGGTTGCGTCTG+TGG | 0.511164 | 3.4:-91002382 | MS.gene37462:CDS |
| GGAGTATGAAGGTGTGGAGG+AGG | 0.511393 | 3.4:-91002520 | MS.gene37462:CDS |
| GTGACGGTGGTGTATATCTC+GGG | 0.512300 | 3.4:+91003587 | None:intergenic |
| GTAATCACCTTCCCTTTCCA+AGG | 0.512812 | 3.4:+91002045 | None:intergenic |
| TGTTTATTGGGGCTAATCGA+TGG | 0.515357 | 3.4:-91002416 | MS.gene37462:CDS |
| GCCACTGCTTTCTGAGTGGC+CGG | 0.516326 | 3.4:+91001691 | None:intergenic |
| TCATGAAGAAACTTAAAATG+AGG | 0.516979 | 3.4:+91002714 | None:intergenic |
| TTTCCTAGGGAGGAGTATGA+AGG | 0.518283 | 3.4:-91002531 | MS.gene37462:CDS |
| ATTTGTTATCATTTGATCGA+TGG | 0.519081 | 3.4:+91003544 | None:intergenic |
| GAGTGAAGAGATTGCGGTGA+GGG | 0.519795 | 3.4:-91002928 | MS.gene37462:CDS |
| ATGACATTATTCGGTCTTTG+GGG | 0.524131 | 3.4:-91002245 | MS.gene37462:CDS |
| GAAGGTGATATAAGCCCTCT+AGG | 0.525667 | 3.4:-91001586 | MS.gene37462:CDS |
| GGTGACGGTGGTGTATATCT+CGG | 0.526645 | 3.4:+91003586 | None:intergenic |
| TATAAGCCCTCTAGGAGCTA+TGG | 0.526879 | 3.4:-91001578 | MS.gene37462:CDS |
| AATGCCACACACACGTCCAT+AGG | 0.527660 | 3.4:+91002099 | None:intergenic |
| TTTCTGTTAGTGTCATTGGT+GGG | 0.528326 | 3.4:+91003495 | None:intergenic |
| GACATTATTCGGTCTTTGGG+GGG | 0.529268 | 3.4:-91002243 | MS.gene37462:CDS |
| CTTCTCTTTATAAAACTCCA+TGG | 0.529872 | 3.4:+91002359 | None:intergenic |
| GGCATAGAAGCCTTCACGAT+CGG | 0.537064 | 3.4:+91003295 | None:intergenic |
| TTTGTTAGTGGTGGCGGTGA+CGG | 0.537839 | 3.4:+91003571 | None:intergenic |
| CTGATTACCAAGCAATCACT+AGG | 0.538407 | 3.4:-91001795 | MS.gene37462:CDS |
| TGCTCAAGAAAGGGAAGATG+AGG | 0.538489 | 3.4:-91002167 | MS.gene37462:CDS |
| ATGAGGCGAGGGCTGCGGCG+AGG | 0.539072 | 3.4:-91002905 | MS.gene37462:CDS |
| GGGAAGACTACGATCGCTGC+TGG | 0.539340 | 3.4:-91002282 | MS.gene37462:CDS |
| GCAAGATCCAGAAACAAGAA+TGG | 0.540077 | 3.4:-91003145 | MS.gene37462:CDS |
| ATGGACGTGTGTGTGGCATT+GGG | 0.541189 | 3.4:-91002096 | MS.gene37462:CDS |
| TGTAACCTCCGCGGCATCCG+TGG | 0.543934 | 3.4:-91003329 | MS.gene37462:CDS |
| CAAGTTTAAGGGTGGTGAGT+GGG | 0.544099 | 3.4:+91003354 | None:intergenic |
| GAAAATTCTATCAAGAACAA+TGG | 0.546038 | 3.4:-91003052 | MS.gene37462:CDS |
| TACCTTGCAGAAGACGGTAA+AGG | 0.552943 | 3.4:+91003177 | None:intergenic |
| GGGGTTTAACTTGAACCAAA+GGG | 0.555835 | 3.4:+91003018 | None:intergenic |
| CTCGGGTGGGCCAACGAGTG+TGG | 0.556190 | 3.4:+91003604 | None:intergenic |
| GGGTGGGCCAACGAGTGTGG+TGG | 0.563217 | 3.4:+91003607 | None:intergenic |
| ACACCTTCATACTCCTCCCT+AGG | 0.564028 | 3.4:+91002528 | None:intergenic |
| AACCAAATTCAGCAAGGGAA+GGG | 0.566367 | 3.4:+91003222 | None:intergenic |
| TGACATTATTCGGTCTTTGG+GGG | 0.566528 | 3.4:-91002244 | MS.gene37462:CDS |
| TTGGAATCTGAGAGACTCGA+TGG | 0.569037 | 3.4:-91001725 | MS.gene37462:CDS |
| GGAGGAGTATGAAGGTGTGG+AGG | 0.569192 | 3.4:-91002523 | MS.gene37462:CDS |
| ATGCCACACACACGTCCATA+GGG | 0.569765 | 3.4:+91002100 | None:intergenic |
| ATCCTTTACCGTCTTCTGCA+AGG | 0.570084 | 3.4:-91003179 | MS.gene37462:CDS |
| GGGGAGTGTCGGGGACAACA+TGG | 0.570272 | 3.4:+91003420 | None:intergenic |
| TTGCGGTGAGGGATGAGGCG+AGG | 0.572019 | 3.4:-91002917 | MS.gene37462:CDS |
| CCCTGAATCACATGAAGCTG+AGG | 0.572263 | 3.4:+91002009 | None:intergenic |
| GGAGTTACAGTGGACGAGAA+TGG | 0.572730 | 3.4:-91002199 | MS.gene37462:CDS |
| TGTGTTGGTGCCGTTGAGGA+AGG | 0.572986 | 3.4:-91002457 | MS.gene37462:CDS |
| TGTGTGAGGAACCTTGGAAA+GGG | 0.574082 | 3.4:-91002056 | MS.gene37462:CDS |
| GGAAGGGACATTAGAAGCCA+GGG | 0.574195 | 3.4:+91003238 | None:intergenic |
| ACGGTGGTGTATATCTCGGG+TGG | 0.575504 | 3.4:+91003590 | None:intergenic |
| ACCATGCTAATTGAAGTCTT+CGG | 0.575773 | 3.4:+91003384 | None:intergenic |
| CAGACGCAACCCTGTTGTAA+GGG | 0.576953 | 3.4:+91002385 | None:intergenic |
| CATGAAGAAACTTAAAATGA+GGG | 0.577911 | 3.4:+91002715 | None:intergenic |
| TGGATGATTTGCTCAAGAAA+GGG | 0.578023 | 3.4:-91002176 | MS.gene37462:CDS |
| CTAGGAAGTATAGAGAGAAA+GGG | 0.581276 | 3.4:-91001777 | MS.gene37462:CDS |
| CAGCTTCCATAGCTCCTAGA+GGG | 0.582415 | 3.4:+91001572 | None:intergenic |
| TCTTCGGAGGAGAGTTTCGG+GGG | 0.583531 | 3.4:+91003400 | None:intergenic |
| GTTGCCTGAGGTGTTTATTG+GGG | 0.586855 | 3.4:-91002427 | MS.gene37462:CDS |
| TCCGAAGACTTCAATTAGCA+TGG | 0.588313 | 3.4:-91003385 | MS.gene37462:CDS |
| TAACCAAATTCAGCAAGGGA+AGG | 0.588634 | 3.4:+91003221 | None:intergenic |
| GTATTTGGAGGATGTGAAAG+CGG | 0.588845 | 3.4:-91002304 | MS.gene37462:CDS |
| CGCTGTAAATGGGAATCTCA+AGG | 0.590397 | 3.4:-91001893 | MS.gene37462:CDS |
| TTAGCCCCAATAAACACCTC+AGG | 0.590426 | 3.4:+91002423 | None:intergenic |
| GAAGTAACCAAATTCAGCAA+GGG | 0.590777 | 3.4:+91003217 | None:intergenic |
| TGCCGGTACCACGGATGCCG+CGG | 0.590984 | 3.4:+91003321 | None:intergenic |
| GGTTCGTGATCGTTTGAGGA+AGG | 0.592796 | 3.4:-91002481 | MS.gene37462:CDS |
| CGGTGGTGTATATCTCGGGT+GGG | 0.595220 | 3.4:+91003591 | None:intergenic |
| TGAAGTAACCAAATTCAGCA+AGG | 0.597355 | 3.4:+91003216 | None:intergenic |
| CTCAGCTTCATGTGATTCAG+GGG | 0.597407 | 3.4:-91002008 | MS.gene37462:CDS |
| TTTGTGAGGAAGATGGATTG+GGG | 0.599203 | 3.4:-91001961 | MS.gene37462:CDS |
| GGTTTAACTTGAACCAAAGG+GGG | 0.600927 | 3.4:+91003020 | None:intergenic |
| GCCACCGCCACCACACTCGT+TGG | 0.601442 | 3.4:-91003614 | MS.gene37462:CDS |
| ATGTCTCTGGGAGTATGACT+GGG | 0.602698 | 3.4:-91002125 | MS.gene37462:CDS |
| TTTCTGAGTGGCCGGCACTG+GGG | 0.602919 | 3.4:+91001699 | None:intergenic |
| GATCGGACTTGCCGGTACCA+CGG | 0.606070 | 3.4:+91003312 | None:intergenic |
| GAGAGGTGGCGGAGTTACAG+TGG | 0.606406 | 3.4:-91002209 | MS.gene37462:CDS |
| CAGCGCCACTGCTTTCTGAG+TGG | 0.606568 | 3.4:+91001687 | None:intergenic |
| ACAAGTTTAAGGGTGGTGAG+TGG | 0.610115 | 3.4:+91003353 | None:intergenic |
| CCATCACCACCCCAAAACCC+TGG | 0.617883 | 3.4:-91003255 | MS.gene37462:CDS |
| TTGTGAGGAAGATGGATTGG+GGG | 0.618528 | 3.4:-91001960 | MS.gene37462:CDS |
| AGTCCAAGACAGAGTTTGTG+AGG | 0.622585 | 3.4:-91001975 | MS.gene37462:CDS |
| TAGGGAGGAGTATGAAGGTG+TGG | 0.624294 | 3.4:-91002526 | MS.gene37462:CDS |
| GATATTTGTATTCAGTGACA+TGG | 0.624325 | 3.4:-91001851 | MS.gene37462:CDS |
| GTCTTCGGAGGAGAGTTTCG+GGG | 0.626131 | 3.4:+91003399 | None:intergenic |
| ATTTGGAGGATGTGAAAGCG+GGG | 0.632099 | 3.4:-91002302 | MS.gene37462:CDS |
| TGTTGGTACCTTGCAGAAGA+CGG | 0.632980 | 3.4:+91003171 | None:intergenic |
| GCCGGCCACTCAGAAAGCAG+TGG | 0.634703 | 3.4:-91001692 | MS.gene37462:CDS |
| ACCGGCAAGTCCGATCGTGA+AGG | 0.635632 | 3.4:-91003305 | MS.gene37462:CDS |
| TGGCTAAGAAGCTTGTTGAA+CGG | 0.636234 | 3.4:-91002749 | MS.gene37462:CDS |
| GATCCCTATGGACGTGTGTG+TGG | 0.637269 | 3.4:-91002103 | MS.gene37462:CDS |
| TCGTTTGAGGAAGGATGTGT+TGG | 0.639563 | 3.4:-91002472 | MS.gene37462:CDS |
| AAATTGTTCTTGGACAATGA+AGG | 0.639905 | 3.4:-91001637 | MS.gene37462:CDS |
| GTTAGTGGTGGCGGTGACGG+TGG | 0.643408 | 3.4:+91003574 | None:intergenic |
| CATCTGCTGACAGACAATGA+AGG | 0.644075 | 3.4:-91001604 | MS.gene37462:CDS |
| AACTCCAAAACCTTCCTCAA+CGG | 0.645488 | 3.4:+91002447 | None:intergenic |
| TCAAATGAAGAGTCAACCGA+AGG | 0.647905 | 3.4:+91002594 | None:intergenic |
| TTGCCTGTAGAGAGAAATGT+TGG | 0.651123 | 3.4:+91003464 | None:intergenic |
| AGGATGTGTTGGTGCCGTTG+AGG | 0.652976 | 3.4:-91002461 | MS.gene37462:CDS |
| TTGTGTGAGGAACCTTGGAA+AGG | 0.654898 | 3.4:-91002057 | MS.gene37462:CDS |
| GGGTTTAACTTGAACCAAAG+GGG | 0.656071 | 3.4:+91003019 | None:intergenic |
| CGGTACCACGGATGCCGCGG+AGG | 0.656528 | 3.4:+91003324 | None:intergenic |
| GTTACAGTGGACGAGAATGG+TGG | 0.656838 | 3.4:-91002196 | MS.gene37462:CDS |
| TGTGTGAGAGTATCGCGAAG+AGG | 0.656916 | 3.4:-91002557 | MS.gene37462:CDS |
| AATCGTGAAGTACCGAAAAG+GGG | 0.664349 | 3.4:+91002973 | None:intergenic |
| AAAGACCGAATAATGTCATG+AGG | 0.667681 | 3.4:+91002249 | None:intergenic |
| GTTACAGACAAGTTTAAGGG+TGG | 0.668561 | 3.4:+91003346 | None:intergenic |
| GATGAACACTGATTTCCAGA+AGG | 0.673235 | 3.4:-91001938 | MS.gene37462:CDS |
| ATGCTAATTGAAGTCTTCGG+AGG | 0.673387 | 3.4:+91003387 | None:intergenic |
| GTTGGTGTCTGAATTGTGTG+AGG | 0.673906 | 3.4:-91002070 | MS.gene37462:CDS |
| TTTGATGAGTGAAGAGATTG+CGG | 0.678619 | 3.4:-91002934 | MS.gene37462:CDS |
| TGAGGAACCTTGGAAAGGGA+AGG | 0.678969 | 3.4:-91002052 | MS.gene37462:CDS |
| GCAGCTTCCATAGCTCCTAG+AGG | 0.684535 | 3.4:+91001571 | None:intergenic |
| TCAGCTTCATGTGATTCAGG+GGG | 0.686603 | 3.4:-91002007 | MS.gene37462:CDS |
| GAAATTGATCCCTTACAACA+GGG | 0.693077 | 3.4:-91002394 | MS.gene37462:CDS |
| ATGGTGAAACCAAAGAGCAG+CGG | 0.699924 | 3.4:+91003274 | None:intergenic |
| CAACTAGTTTCTGATACTCG+GGG | 0.701259 | 3.4:+91001539 | None:intergenic |
| TGAGTGAAGAGATTGCGGTG+AGG | 0.713300 | 3.4:-91002929 | MS.gene37462:CDS |
| AAACTTGTCTGTAACCTCCG+CGG | 0.727247 | 3.4:-91003338 | MS.gene37462:CDS |
| CTTCGGAGGAGAGTTTCGGG+GGG | 0.743965 | 3.4:+91003401 | None:intergenic |
| TGTAAATGGGAATCTCAAGG+AGG | 0.765353 | 3.4:-91001890 | MS.gene37462:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTCTATCAAGAACAAT+GGG | - | chr3.4:91002094-91002113 | MS.gene37462:CDS | 20.0% |
| !!! | ATATTGAGTTTTTGAAATGT+GGG | - | chr3.4:91002492-91002511 | MS.gene37462:CDS | 20.0% |
| !!! | TTTGCGATTTTTTTTTCTAT+AGG | + | chr3.4:91002045-91002064 | None:intergenic | 20.0% |
| ! | AGATTCCAAAAAACTATTTG+AGG | + | chr3.4:91003409-91003428 | None:intergenic | 25.0% |
| ! | CATGAAGAAACTTAAAATGA+GGG | + | chr3.4:91002433-91002452 | None:intergenic | 25.0% |
| ! | GAAAATTCTATCAAGAACAA+TGG | - | chr3.4:91002093-91002112 | MS.gene37462:CDS | 25.0% |
| ! | TCATGAAGAAACTTAAAATG+AGG | + | chr3.4:91002434-91002453 | None:intergenic | 25.0% |
| !! | AGAATTTTCTTACACCAAAA+CGG | + | chr3.4:91002082-91002101 | None:intergenic | 25.0% |
| !! | ATATTTTCTGTTAGTGTCAT+TGG | + | chr3.4:91001657-91001676 | None:intergenic | 25.0% |
| !! | TTTGGATTTTCTTAACCAAA+GGG | + | chr3.4:91002151-91002170 | None:intergenic | 25.0% |
| !! | TTTTGGATTTTCTTAACCAA+AGG | + | chr3.4:91002152-91002171 | None:intergenic | 25.0% |
| !!! | ATTTGTTATCATTTGATCGA+TGG | + | chr3.4:91001604-91001623 | None:intergenic | 25.0% |
| !!! | GATATTGAGTTTTTGAAATG+TGG | - | chr3.4:91002491-91002510 | MS.gene37462:CDS | 25.0% |
| !!! | TTTTGAAGCATGATAAAAAG+AGG | - | chr3.4:91002810-91002829 | MS.gene37462:CDS | 25.0% |
| AAATTGTTCTTGGACAATGA+AGG | - | chr3.4:91003508-91003527 | MS.gene37462:CDS | 30.0% | |
| ACAATCTTCTTCTCTTTCTT+CGG | + | chr3.4:91002374-91002393 | None:intergenic | 30.0% | |
| ATTATGAGAAGAAAGAGAAG+AGG | - | chr3.4:91002324-91002343 | MS.gene37462:CDS | 30.0% | |
| CTTCTCTTTATAAAACTCCA+TGG | + | chr3.4:91002789-91002808 | None:intergenic | 30.0% | |
| GAAAGAGAAGAAGATTGTAT+TGG | - | chr3.4:91002376-91002395 | MS.gene37462:CDS | 30.0% | |
| GATATTTGTATTCAGTGACA+TGG | - | chr3.4:91003294-91003313 | MS.gene37462:CDS | 30.0% | |
| ! | GAATTTTCTTACACCAAAAC+GGG | + | chr3.4:91002081-91002100 | None:intergenic | 30.0% |
| ! | TCAAAATCAAAATCCCGTTT+TGG | - | chr3.4:91002065-91002084 | MS.gene37462:CDS | 30.0% |
| ! | TTGGATTTTCTTAACCAAAG+GGG | + | chr3.4:91002150-91002169 | None:intergenic | 30.0% |
| ! | TTTGATTCCATTCTTGTTTC+TGG | + | chr3.4:91002010-91002029 | None:intergenic | 30.0% |
| !! | AAAGAGGTTTGAGAAGTATT+TGG | - | chr3.4:91002826-91002845 | MS.gene37462:CDS | 30.0% |
| AAAGACCGAATAATGTCATG+AGG | + | chr3.4:91002899-91002918 | None:intergenic | 35.0% | |
| AAGTATAGAGAGAAAGGGTA+TGG | - | chr3.4:91003373-91003392 | MS.gene37462:CDS | 35.0% | |
| ACCATGCTAATTGAAGTCTT+CGG | + | chr3.4:91001764-91001783 | None:intergenic | 35.0% | |
| ATATGCGATCAAATACCTTC+TGG | + | chr3.4:91003225-91003244 | None:intergenic | 35.0% | |
| ATATTGGATGTCGCTGTAAA+TGG | - | chr3.4:91003241-91003260 | MS.gene37462:CDS | 35.0% | |
| ATGACATTATTCGGTCTTTG+GGG | - | chr3.4:91002900-91002919 | MS.gene37462:CDS | 35.0% | |
| CATGACATTATTCGGTCTTT+GGG | - | chr3.4:91002899-91002918 | MS.gene37462:CDS | 35.0% | |
| GAAATTGATCCCTTACAACA+GGG | - | chr3.4:91002751-91002770 | MS.gene37462:CDS | 35.0% | |
| GAAGTAACCAAATTCAGCAA+GGG | + | chr3.4:91001931-91001950 | None:intergenic | 35.0% | |
| GAATCTGCTGAAATTGTTCT+TGG | - | chr3.4:91003498-91003517 | MS.gene37462:CDS | 35.0% | |
| GAGGTTACAGACAAGTTTAA+GGG | + | chr3.4:91001805-91001824 | None:intergenic | 35.0% | |
| TATACTTCCTAGTGATTGCT+TGG | + | chr3.4:91003360-91003379 | None:intergenic | 35.0% | |
| TATTGGATGTCGCTGTAAAT+GGG | - | chr3.4:91003242-91003261 | MS.gene37462:CDS | 35.0% | |
| TCATGACATTATTCGGTCTT+TGG | - | chr3.4:91002898-91002917 | MS.gene37462:CDS | 35.0% | |
| TGAAGTAACCAAATTCAGCA+AGG | + | chr3.4:91001932-91001951 | None:intergenic | 35.0% | |
| TGCTTCCTCATGACATTATT+CGG | - | chr3.4:91002891-91002910 | MS.gene37462:CDS | 35.0% | |
| TTTGATGAGTGAAGAGATTG+CGG | - | chr3.4:91002211-91002230 | MS.gene37462:CDS | 35.0% | |
| ! | AAAAACTATTTGAGGCACAG+CGG | + | chr3.4:91003401-91003420 | None:intergenic | 35.0% |
| ! | ACAACTAGTTTCTGATACTC+GGG | + | chr3.4:91003610-91003629 | None:intergenic | 35.0% |
| ! | ACTAGGAAGTATAGAGAGAA+AGG | - | chr3.4:91003367-91003386 | MS.gene37462:CDS | 35.0% |
| ! | CACAACTAGTTTCTGATACT+CGG | + | chr3.4:91003611-91003630 | None:intergenic | 35.0% |
| ! | CTAGGAAGTATAGAGAGAAA+GGG | - | chr3.4:91003368-91003387 | MS.gene37462:CDS | 35.0% |
| ! | GAAAATCCAAAACCCCTTTT+CGG | - | chr3.4:91002160-91002179 | MS.gene37462:CDS | 35.0% |
| ! | GGTTGACTCTTCATTTGATA+GGG | - | chr3.4:91002556-91002575 | MS.gene37462:CDS | 35.0% |
| ! | TGGATTTTCTTAACCAAAGG+GGG | + | chr3.4:91002149-91002168 | None:intergenic | 35.0% |
| ! | TTTCTGTTAGTGTCATTGGT+GGG | + | chr3.4:91001653-91001672 | None:intergenic | 35.0% |
| !! | AAATTAGTCTTGCTGCGAAA+TGG | - | chr3.4:91002525-91002544 | MS.gene37462:CDS | 35.0% |
| !! | ATAATCGTGAAGTACCGAAA+AGG | + | chr3.4:91002177-91002196 | None:intergenic | 35.0% |
| !! | GAAGGTATTTGATCGCATAT+TGG | - | chr3.4:91003225-91003244 | MS.gene37462:CDS | 35.0% |
| !! | TAATCGTGAAGTACCGAAAA+GGG | + | chr3.4:91002176-91002195 | None:intergenic | 35.0% |
| !! | TGGATGATTTGCTCAAGAAA+GGG | - | chr3.4:91002969-91002988 | MS.gene37462:CDS | 35.0% |
| !! | TTTTCTGTTAGTGTCATTGG+TGG | + | chr3.4:91001654-91001673 | None:intergenic | 35.0% |
| !!! | ATCGATGGAAGTTTTGTTAG+TGG | + | chr3.4:91001589-91001608 | None:intergenic | 35.0% |
| !!! | CTGTGCCTCAAATAGTTTTT+TGG | - | chr3.4:91003401-91003420 | MS.gene37462:CDS | 35.0% |
| !!! | TGGGTTTTGGTTTGTTTGAA+GGG | + | chr3.4:91001634-91001653 | None:intergenic | 35.0% |
| AACCAAATTCAGCAAGGGAA+GGG | + | chr3.4:91001926-91001945 | None:intergenic | 40.0% | |
| AACTCCAAAACCTTCCTCAA+CGG | + | chr3.4:91002701-91002720 | None:intergenic | 40.0% | |
| AGAAGACGGTAAAGGATTTC+TGG | + | chr3.4:91001963-91001982 | None:intergenic | 40.0% | |
| AGGAGGATCAGATGATTAAG+AGG | - | chr3.4:91003272-91003291 | MS.gene37462:CDS | 40.0% | |
| AGTTTGTGAGGAAGATGGAT+TGG | - | chr3.4:91003182-91003201 | MS.gene37462:CDS | 40.0% | |
| ATCAAGCATCTGCAAACTCT+TGG | - | chr3.4:91003323-91003342 | MS.gene37462:CDS | 40.0% | |
| ATGCTAATTGAAGTCTTCGG+AGG | + | chr3.4:91001761-91001780 | None:intergenic | 40.0% | |
| CTGATTACCAAGCAATCACT+AGG | - | chr3.4:91003350-91003369 | MS.gene37462:CDS | 40.0% | |
| GAAGACGGTAAAGGATTTCT+GGG | + | chr3.4:91001962-91001981 | None:intergenic | 40.0% | |
| GCAAGATCCAGAAACAAGAA+TGG | - | chr3.4:91002000-91002019 | MS.gene37462:CDS | 40.0% | |
| GGAAAAAGAAGTCGAGACAT+GGG | + | chr3.4:91001707-91001726 | None:intergenic | 40.0% | |
| GGAAATTGATCCCTTACAAC+AGG | - | chr3.4:91002750-91002769 | MS.gene37462:CDS | 40.0% | |
| GGAGGTTACAGACAAGTTTA+AGG | + | chr3.4:91001806-91001825 | None:intergenic | 40.0% | |
| GTATCAGAAACTAGTTGTGC+TGG | - | chr3.4:91003612-91003631 | MS.gene37462:CDS | 40.0% | |
| GTATTTGGAGGATGTGAAAG+CGG | - | chr3.4:91002841-91002860 | MS.gene37462:CDS | 40.0% | |
| GTTACAGACAAGTTTAAGGG+TGG | + | chr3.4:91001802-91001821 | None:intergenic | 40.0% | |
| TAACCAAATTCAGCAAGGGA+AGG | + | chr3.4:91001927-91001946 | None:intergenic | 40.0% | |
| TATTTGGAGGATGTGAAAGC+GGG | - | chr3.4:91002842-91002861 | MS.gene37462:CDS | 40.0% | |
| TCAAATGAAGAGTCAACCGA+AGG | + | chr3.4:91002554-91002573 | None:intergenic | 40.0% | |
| TCAAGCATCTGCAAACTCTT+GGG | - | chr3.4:91003324-91003343 | MS.gene37462:CDS | 40.0% | |
| TCACCAACATTTCTCTCTAC+AGG | - | chr3.4:91001678-91001697 | MS.gene37462:CDS | 40.0% | |
| TCCGAAGACTTCAATTAGCA+TGG | - | chr3.4:91001760-91001779 | MS.gene37462:CDS | 40.0% | |
| TGACATTATTCGGTCTTTGG+GGG | - | chr3.4:91002901-91002920 | MS.gene37462:CDS | 40.0% | |
| TGGAAAAAGAAGTCGAGACA+TGG | + | chr3.4:91001708-91001727 | None:intergenic | 40.0% | |
| TGTAAATGGGAATCTCAAGG+AGG | - | chr3.4:91003255-91003274 | MS.gene37462:CDS | 40.0% | |
| TGTTTATTGGGGCTAATCGA+TGG | - | chr3.4:91002729-91002748 | MS.gene37462:CDS | 40.0% | |
| TTGCCTGTAGAGAGAAATGT+TGG | + | chr3.4:91001684-91001703 | None:intergenic | 40.0% | |
| TTTCTGGATCTTGCGTATGT+TGG | + | chr3.4:91001994-91002013 | None:intergenic | 40.0% | |
| ! | ACATTAGAAGCCAGGGTTTT+GGG | + | chr3.4:91001903-91001922 | None:intergenic | 40.0% |
| ! | AGTTGCCTGAGGTGTTTATT+GGG | - | chr3.4:91002717-91002736 | MS.gene37462:CDS | 40.0% |
| ! | CAACTAGTTTCTGATACTCG+GGG | + | chr3.4:91003609-91003628 | None:intergenic | 40.0% |
| ! | CGCAGCAAGACTAATTTTTG+TGG | + | chr3.4:91002522-91002541 | None:intergenic | 40.0% |
| ! | CGGTTGACTCTTCATTTGAT+AGG | - | chr3.4:91002555-91002574 | MS.gene37462:CDS | 40.0% |
| ! | GTTTGTGAGGAAGATGGATT+GGG | - | chr3.4:91003183-91003202 | MS.gene37462:CDS | 40.0% |
| !! | AATCGTGAAGTACCGAAAAG+GGG | + | chr3.4:91002175-91002194 | None:intergenic | 40.0% |
| !! | GAGGTTTGAGAAGTATTTGG+AGG | - | chr3.4:91002829-91002848 | MS.gene37462:CDS | 40.0% |
| !! | GATGAACACTGATTTCCAGA+AGG | - | chr3.4:91003207-91003226 | MS.gene37462:CDS | 40.0% |
| !! | GGGGTTTAACTTGAACCAAA+GGG | + | chr3.4:91002130-91002149 | None:intergenic | 40.0% |
| !! | GGGTTTAACTTGAACCAAAG+GGG | + | chr3.4:91002129-91002148 | None:intergenic | 40.0% |
| !! | GGTTTAACTTGAACCAAAGG+GGG | + | chr3.4:91002128-91002147 | None:intergenic | 40.0% |
| !! | GTGGATGATTTGCTCAAGAA+AGG | - | chr3.4:91002968-91002987 | MS.gene37462:CDS | 40.0% |
| !! | TGGCTAAGAAGCTTGTTGAA+CGG | - | chr3.4:91002396-91002415 | MS.gene37462:CDS | 40.0% |
| !! | TTTGTGAGGAAGATGGATTG+GGG | - | chr3.4:91003184-91003203 | MS.gene37462:CDS | 40.0% |
| !!! | GATGGAAGTTTTGTTAGTGG+TGG | + | chr3.4:91001586-91001605 | None:intergenic | 40.0% |
| !!! | GTGGGTTTTGGTTTGTTTGA+AGG | + | chr3.4:91001635-91001654 | None:intergenic | 40.0% |
| !!! | TTAGTGTCATTGGTGGGTTT+TGG | + | chr3.4:91001647-91001666 | None:intergenic | 40.0% |
| AAACTTGTCTGTAACCTCCG+CGG | - | chr3.4:91001807-91001826 | MS.gene37462:CDS | 45.0% | |
| AAGTCTTCGGAGGAGAGTTT+CGG | + | chr3.4:91001751-91001770 | None:intergenic | 45.0% | |
| ACAAGTTTAAGGGTGGTGAG+TGG | + | chr3.4:91001795-91001814 | None:intergenic | 45.0% | |
| AGTCCAAGACAGAGTTTGTG+AGG | - | chr3.4:91003170-91003189 | MS.gene37462:CDS | 45.0% | |
| ATAGGGTTCGTGATCGTTTG+AGG | - | chr3.4:91002660-91002679 | MS.gene37462:CDS | 45.0% | |
| ATCCTTTACCGTCTTCTGCA+AGG | - | chr3.4:91001966-91001985 | MS.gene37462:CDS | 45.0% | |
| ATGGGAGTTTAAACCCCCTT+TGG | - | chr3.4:91002112-91002131 | MS.gene37462:CDS | 45.0% | |
| ATGGTGAAACCAAAGAGCAG+CGG | + | chr3.4:91001874-91001893 | None:intergenic | 45.0% | |
| ATTTGGAGGATGTGAAAGCG+GGG | - | chr3.4:91002843-91002862 | MS.gene37462:CDS | 45.0% | |
| CAAGTTTAAGGGTGGTGAGT+GGG | + | chr3.4:91001794-91001813 | None:intergenic | 45.0% | |
| CATCTGCTGACAGACAATGA+AGG | - | chr3.4:91003541-91003560 | MS.gene37462:CDS | 45.0% | |
| CCTCAGCTTCATGTGATTCA+GGG | - | chr3.4:91003136-91003155 | MS.gene37462:CDS | 45.0% | |
| CGCTGTAAATGGGAATCTCA+AGG | - | chr3.4:91003252-91003271 | MS.gene37462:CDS | 45.0% | |
| CTCAGCTTCATGTGATTCAG+GGG | - | chr3.4:91003137-91003156 | MS.gene37462:CDS | 45.0% | |
| CTGAATTGTGTGAGGAACCT+TGG | - | chr3.4:91003083-91003102 | MS.gene37462:CDS | 45.0% | |
| CTTCATTGTCTGTCAGCAGA+TGG | + | chr3.4:91003543-91003562 | None:intergenic | 45.0% | |
| CTTCCTCACAAACTCTGTCT+TGG | + | chr3.4:91003176-91003195 | None:intergenic | 45.0% | |
| GAAGGTGATATAAGCCCTCT+AGG | - | chr3.4:91003559-91003578 | MS.gene37462:CDS | 45.0% | |
| GACAGAGTTTGTGAGGAAGA+TGG | - | chr3.4:91003177-91003196 | MS.gene37462:CDS | 45.0% | |
| GACATTATTCGGTCTTTGGG+GGG | - | chr3.4:91002902-91002921 | MS.gene37462:CDS | 45.0% | |
| GTAATCACCTTCCCTTTCCA+AGG | + | chr3.4:91003103-91003122 | None:intergenic | 45.0% | |
| TACCTTGCAGAAGACGGTAA+AGG | + | chr3.4:91001971-91001990 | None:intergenic | 45.0% | |
| TCAGCTTCATGTGATTCAGG+GGG | - | chr3.4:91003138-91003157 | MS.gene37462:CDS | 45.0% | |
| TCGTTTGAGGAAGGATGTGT+TGG | - | chr3.4:91002673-91002692 | MS.gene37462:CDS | 45.0% | |
| TGCTCAAGAAAGGGAAGATG+AGG | - | chr3.4:91002978-91002997 | MS.gene37462:CDS | 45.0% | |
| TGTGTGAGGAACCTTGGAAA+GGG | - | chr3.4:91003089-91003108 | MS.gene37462:CDS | 45.0% | |
| TGTTGGTACCTTGCAGAAGA+CGG | + | chr3.4:91001977-91001996 | None:intergenic | 45.0% | |
| TTAGCCCCAATAAACACCTC+AGG | + | chr3.4:91002725-91002744 | None:intergenic | 45.0% | |
| TTGCTGTGTGTGATGTCTCT+GGG | - | chr3.4:91003008-91003027 | MS.gene37462:CDS | 45.0% | |
| TTGGAATCTGAGAGACTCGA+TGG | - | chr3.4:91003420-91003439 | MS.gene37462:CDS | 45.0% | |
| TTGTGTGAGGAACCTTGGAA+AGG | - | chr3.4:91003088-91003107 | MS.gene37462:CDS | 45.0% | |
| ! | AGGAGGCGCATTATGCTTAT+AGG | - | chr3.4:91002642-91002661 | MS.gene37462:CDS | 45.0% |
| ! | ATGTCTCTGGGAGTATGACT+GGG | - | chr3.4:91003020-91003039 | MS.gene37462:CDS | 45.0% |
| ! | CATTAGAAGCCAGGGTTTTG+GGG | + | chr3.4:91001902-91001921 | None:intergenic | 45.0% |
| ! | CGCGAAGAGGATTTTTCCTA+GGG | - | chr3.4:91002601-91002620 | MS.gene37462:CDS | 45.0% |
| ! | GAAGAGGATTTTTCCTAGGG+AGG | - | chr3.4:91002604-91002623 | MS.gene37462:CDS | 45.0% |
| ! | GACATTAGAAGCCAGGGTTT+TGG | + | chr3.4:91001904-91001923 | None:intergenic | 45.0% |
| ! | GAGTTGCCTGAGGTGTTTAT+TGG | - | chr3.4:91002716-91002735 | MS.gene37462:CDS | 45.0% |
| ! | GGAGGCGCATTATGCTTATA+GGG | - | chr3.4:91002643-91002662 | MS.gene37462:CDS | 45.0% |
| ! | GGTTCAAGTTAAACCCCCTT+TGG | - | chr3.4:91002133-91002152 | MS.gene37462:CDS | 45.0% |
| ! | GTTGCCTGAGGTGTTTATTG+GGG | - | chr3.4:91002718-91002737 | MS.gene37462:CDS | 45.0% |
| ! | GTTGGTGTCTGAATTGTGTG+AGG | - | chr3.4:91003075-91003094 | MS.gene37462:CDS | 45.0% |
| ! | TATAAGCCCTCTAGGAGCTA+TGG | - | chr3.4:91003567-91003586 | MS.gene37462:CDS | 45.0% |
| ! | TCGCGAAGAGGATTTTTCCT+AGG | - | chr3.4:91002600-91002619 | MS.gene37462:CDS | 45.0% |
| ! | TTTCCTAGGGAGGAGTATGA+AGG | - | chr3.4:91002614-91002633 | MS.gene37462:CDS | 45.0% |
| !! | GGGGGTTTAACTTGAACCAA+AGG | + | chr3.4:91002131-91002150 | None:intergenic | 45.0% |
| !! | TTGTGAGGAAGATGGATTGG+GGG | - | chr3.4:91003185-91003204 | MS.gene37462:CDS | 45.0% |
| !!! | GAAGTACCGAAAAGGGGTTT+TGG | + | chr3.4:91002169-91002188 | None:intergenic | 45.0% |
| !!! | GGAAGTTTTGTTAGTGGTGG+CGG | + | chr3.4:91001583-91001602 | None:intergenic | 45.0% |
| AATGCCACACACACGTCCAT+AGG | + | chr3.4:91003049-91003068 | None:intergenic | 50.0% | |
| ACACCTTCATACTCCTCCCT+AGG | + | chr3.4:91002620-91002639 | None:intergenic | 50.0% | |
| ACAGACGCAACCCTGTTGTA+AGG | + | chr3.4:91002764-91002783 | None:intergenic | 50.0% | |
| AGTCTTCGGAGGAGAGTTTC+GGG | + | chr3.4:91001750-91001769 | None:intergenic | 50.0% | |
| ATGCCACACACACGTCCATA+GGG | + | chr3.4:91003048-91003067 | None:intergenic | 50.0% | |
| ATGGACGTGTGTGTGGCATT+GGG | - | chr3.4:91003049-91003068 | MS.gene37462:CDS | 50.0% | |
| CAGACGCAACCCTGTTGTAA+GGG | + | chr3.4:91002763-91002782 | None:intergenic | 50.0% | |
| CAGCTTCCATAGCTCCTAGA+GGG | + | chr3.4:91003576-91003595 | None:intergenic | 50.0% | |
| CCCTGAATCACATGAAGCTG+AGG | + | chr3.4:91003139-91003158 | None:intergenic | 50.0% | |
| GAGTATGACTGGGATCCCTA+TGG | - | chr3.4:91003030-91003049 | MS.gene37462:CDS | 50.0% | |
| GAGTGAAGAGATTGCGGTGA+GGG | - | chr3.4:91002217-91002236 | MS.gene37462:CDS | 50.0% | |
| GCCTCAGCTTCATGTGATTC+AGG | - | chr3.4:91003135-91003154 | MS.gene37462:CDS | 50.0% | |
| GCTATGGAAGCTGCAATTGC+TGG | - | chr3.4:91003583-91003602 | MS.gene37462:CDS | 50.0% | |
| GGAAGGGACATTAGAAGCCA+GGG | + | chr3.4:91001910-91001929 | None:intergenic | 50.0% | |
| GGAGTTACAGTGGACGAGAA+TGG | - | chr3.4:91002946-91002965 | MS.gene37462:CDS | 50.0% | |
| GGCATAGAAGCCTTCACGAT+CGG | + | chr3.4:91001853-91001872 | None:intergenic | 50.0% | |
| GGTTCGTGATCGTTTGAGGA+AGG | - | chr3.4:91002664-91002683 | MS.gene37462:CDS | 50.0% | |
| GTCCCTTCCCTTGCTGAATT+TGG | - | chr3.4:91001921-91001940 | MS.gene37462:CDS | 50.0% | |
| GTGACGGTGGTGTATATCTC+GGG | + | chr3.4:91001561-91001580 | None:intergenic | 50.0% | |
| GTTACAGTGGACGAGAATGG+TGG | - | chr3.4:91002949-91002968 | MS.gene37462:CDS | 50.0% | |
| TATGGACGTGTGTGTGGCAT+TGG | - | chr3.4:91003048-91003067 | MS.gene37462:CDS | 50.0% | |
| TGAGGAACCTTGGAAAGGGA+AGG | - | chr3.4:91003093-91003112 | MS.gene37462:CDS | 50.0% | |
| TGAGTGAAGAGATTGCGGTG+AGG | - | chr3.4:91002216-91002235 | MS.gene37462:CDS | 50.0% | |
| TGCTGCGAAATGGTGTCCTT+CGG | - | chr3.4:91002535-91002554 | MS.gene37462:CDS | 50.0% | |
| TTACAACAGGGTTGCGTCTG+TGG | - | chr3.4:91002763-91002782 | MS.gene37462:CDS | 50.0% | |
| ! | ATTATTCGGTCTTTGGGGGG+TGG | - | chr3.4:91002905-91002924 | MS.gene37462:CDS | 50.0% |
| ! | CTTGCTGTGTGTGATGTCTC+TGG | - | chr3.4:91003007-91003026 | MS.gene37462:CDS | 50.0% |
| ! | GATGTCTCTGGGAGTATGAC+TGG | - | chr3.4:91003019-91003038 | MS.gene37462:CDS | 50.0% |
| ! | GGTGACGGTGGTGTATATCT+CGG | + | chr3.4:91001562-91001581 | None:intergenic | 50.0% |
| ! | GTGTGTGGCATTGGGATTGT+TGG | - | chr3.4:91003057-91003076 | MS.gene37462:CDS | 50.0% |
| ! | TAGGGAGGAGTATGAAGGTG+TGG | - | chr3.4:91002619-91002638 | MS.gene37462:CDS | 50.0% |
| !! | AAGGGTGGTGAGTGGGTTAT+AGG | + | chr3.4:91001787-91001806 | None:intergenic | 50.0% |
| !! | TGTGTGAGAGTATCGCGAAG+AGG | - | chr3.4:91002588-91002607 | MS.gene37462:CDS | 50.0% |
| !! | TTTGTTAGTGGTGGCGGTGA+CGG | + | chr3.4:91001577-91001596 | None:intergenic | 50.0% |
| !!! | GAAGGTTTTGGAGTTGCCTG+AGG | - | chr3.4:91002706-91002725 | MS.gene37462:CDS | 50.0% |
| ACGGTGGTGTATATCTCGGG+TGG | + | chr3.4:91001558-91001577 | None:intergenic | 55.0% | |
| AGAGATTGCGGTGAGGGATG+AGG | - | chr3.4:91002223-91002242 | MS.gene37462:CDS | 55.0% | |
| CGGTGGTGTATATCTCGGGT+GGG | + | chr3.4:91001557-91001576 | None:intergenic | 55.0% | |
| GATCCCTATGGACGTGTGTG+TGG | - | chr3.4:91003042-91003061 | MS.gene37462:CDS | 55.0% | |
| GCAGCTTCCATAGCTCCTAG+AGG | + | chr3.4:91003577-91003596 | None:intergenic | 55.0% | |
| GCTTCTATGCCGCTGCTCTT+TGG | - | chr3.4:91001862-91001881 | MS.gene37462:CDS | 55.0% | |
| GGGAAGGGACATTAGAAGCC+AGG | + | chr3.4:91001911-91001930 | None:intergenic | 55.0% | |
| GTCTTCGGAGGAGAGTTTCG+GGG | + | chr3.4:91001749-91001768 | None:intergenic | 55.0% | |
| TCTTCGGAGGAGAGTTTCGG+GGG | + | chr3.4:91001748-91001767 | None:intergenic | 55.0% | |
| ! | GGAGGAGTATGAAGGTGTGG+AGG | - | chr3.4:91002622-91002641 | MS.gene37462:CDS | 55.0% |
| ! | GGAGTATGAAGGTGTGGAGG+AGG | - | chr3.4:91002625-91002644 | MS.gene37462:CDS | 55.0% |
| !! | AAAGCAGTGGCGCTGGTAAG+TGG | - | chr3.4:91003466-91003485 | MS.gene37462:CDS | 55.0% |
| !! | AGGATGTGTTGGTGCCGTTG+AGG | - | chr3.4:91002684-91002703 | MS.gene37462:CDS | 55.0% |
| !! | TGTGTTGGTGCCGTTGAGGA+AGG | - | chr3.4:91002688-91002707 | MS.gene37462:CDS | 55.0% |
| !!! | GGTGCCGTTGAGGAAGGTTT+TGG | - | chr3.4:91002694-91002713 | MS.gene37462:CDS | 55.0% |
| !!! | TAGAAGCCAGGGTTTTGGGG+TGG | + | chr3.4:91001899-91001918 | None:intergenic | 55.0% |
| ACCGGCAAGTCCGATCGTGA+AGG | - | chr3.4:91001840-91001859 | MS.gene37462:CDS | 60.0% | |
| CACTCAGAAAGCAGTGGCGC+TGG | - | chr3.4:91003459-91003478 | MS.gene37462:CDS | 60.0% | |
| CAGCGCCACTGCTTTCTGAG+TGG | + | chr3.4:91003461-91003480 | None:intergenic | 60.0% | |
| CCATCACCACCCCAAAACCC+TGG | - | chr3.4:91001890-91001909 | MS.gene37462:CDS | 60.0% | |
| CTTCGGAGGAGAGTTTCGGG+GGG | + | chr3.4:91001747-91001766 | None:intergenic | 60.0% | |
| CTTTCTGAGTGGCCGGCACT+GGG | + | chr3.4:91003450-91003469 | None:intergenic | 60.0% | |
| GATCGGACTTGCCGGTACCA+CGG | + | chr3.4:91001836-91001855 | None:intergenic | 60.0% | |
| GCCACTGCTTTCTGAGTGGC+CGG | + | chr3.4:91003457-91003476 | None:intergenic | 60.0% | |
| GCCTTCACGATCGGACTTGC+CGG | + | chr3.4:91001844-91001863 | None:intergenic | 60.0% | |
| GGGAAGACTACGATCGCTGC+TGG | - | chr3.4:91002863-91002882 | MS.gene37462:CDS | 60.0% | |
| TTTCTGAGTGGCCGGCACTG+GGG | + | chr3.4:91003449-91003468 | None:intergenic | 60.0% | |
| ! | GAGAGTTTCGGGGGGAGTGT+CGG | + | chr3.4:91001739-91001758 | None:intergenic | 60.0% |
| ! | TCTTTGGGGGGTGGAGATGG+TGG | - | chr3.4:91002914-91002933 | MS.gene37462:CDS | 60.0% |
| !! | AGAGTTTCGGGGGGAGTGTC+GGG | + | chr3.4:91001738-91001757 | None:intergenic | 60.0% |
| !! | GAGAGGTGGCGGAGTTACAG+TGG | - | chr3.4:91002936-91002955 | MS.gene37462:CDS | 60.0% |
| !! | TGGAGATGGTGGAGAGGTGG+CGG | - | chr3.4:91002925-91002944 | MS.gene37462:CDS | 60.0% |
| !!! | CCAGGGTTTTGGGGTGGTGA+TGG | + | chr3.4:91001893-91001912 | None:intergenic | 60.0% |
| CAGGGTTGCGTCTGTGGCCA+TGG | - | chr3.4:91002769-91002788 | MS.gene37462:CDS | 65.0% | |
| GCCGGCCACTCAGAAAGCAG+TGG | - | chr3.4:91003453-91003472 | MS.gene37462:CDS | 65.0% | |
| GCTTTCTGAGTGGCCGGCAC+TGG | + | chr3.4:91003451-91003470 | None:intergenic | 65.0% | |
| TGCGGTGAGGGATGAGGCGA+GGG | - | chr3.4:91002229-91002248 | MS.gene37462:CDS | 65.0% | |
| TGGGCCAACGAGTGTGGTGG+CGG | + | chr3.4:91001538-91001557 | None:intergenic | 65.0% | |
| TGTAACCTCCGCGGCATCCG+TGG | - | chr3.4:91001816-91001835 | MS.gene37462:CDS | 65.0% | |
| TTGCGGTGAGGGATGAGGCG+AGG | - | chr3.4:91002228-91002247 | MS.gene37462:CDS | 65.0% | |
| ! | CGGTCTTTGGGGGGTGGAGA+TGG | - | chr3.4:91002911-91002930 | MS.gene37462:CDS | 65.0% |
| !! | GAGTTTCGGGGGGAGTGTCG+GGG | + | chr3.4:91001737-91001756 | None:intergenic | 65.0% |
| !! | GGGGAGTGTCGGGGACAACA+TGG | + | chr3.4:91001728-91001747 | None:intergenic | 65.0% |
| !! | GGGTGGAGATGGTGGAGAGG+TGG | - | chr3.4:91002922-91002941 | MS.gene37462:CDS | 65.0% |
| !! | GTTAGTGGTGGCGGTGACGG+TGG | + | chr3.4:91001574-91001593 | None:intergenic | 65.0% |
| CTCCGCGGCATCCGTGGTAC+CGG | - | chr3.4:91001822-91001841 | MS.gene37462:CDS | 70.0% | |
| CTCGATGGCGACCCCAGTGC+CGG | - | chr3.4:91003435-91003454 | MS.gene37462:CDS | 70.0% | |
| CTCGGGTGGGCCAACGAGTG+TGG | + | chr3.4:91001544-91001563 | None:intergenic | 70.0% | |
| GAGGGATGAGGCGAGGGCTG+CGG | - | chr3.4:91002235-91002254 | MS.gene37462:CDS | 70.0% | |
| GCCACCGCCACCACACTCGT+TGG | - | chr3.4:91001531-91001550 | MS.gene37462:CDS | 70.0% | |
| GGCTGCGGCGAGGGCTAAGA+GGG | - | chr3.4:91002250-91002269 | MS.gene37462:CDS | 70.0% | |
| GGGTGGGCCAACGAGTGTGG+TGG | + | chr3.4:91001541-91001560 | None:intergenic | 70.0% | |
| TGCCGGTACCACGGATGCCG+CGG | + | chr3.4:91001827-91001846 | None:intergenic | 70.0% | |
| !! | GCCAACGAGTGTGGTGGCGG+TGG | + | chr3.4:91001535-91001554 | None:intergenic | 70.0% |
| !! | GGGGGGTGGAGATGGTGGAG+AGG | - | chr3.4:91002919-91002938 | MS.gene37462:CDS | 70.0% |
| ATGAGGCGAGGGCTGCGGCG+AGG | - | chr3.4:91002240-91002259 | MS.gene37462:CDS | 75.0% | |
| CGGTACCACGGATGCCGCGG+AGG | + | chr3.4:91001824-91001843 | None:intergenic | 75.0% | |
| GGGCTGCGGCGAGGGCTAAG+AGG | - | chr3.4:91002249-91002268 | MS.gene37462:CDS | 75.0% | |
| TGAGGCGAGGGCTGCGGCGA+GGG | - | chr3.4:91002241-91002260 | MS.gene37462:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 91001528 | 91003639 | 91001528 | ID=MS.gene37462 |
| chr3.4 | mRNA | 91001528 | 91003639 | 91001528 | ID=MS.gene37462.t1;Parent=MS.gene37462 |
| chr3.4 | exon | 91001528 | 91003639 | 91001528 | ID=MS.gene37462.t1.exon1;Parent=MS.gene37462.t1 |
| chr3.4 | CDS | 91001528 | 91003639 | 91001528 | ID=cds.MS.gene37462.t1;Parent=MS.gene37462.t1 |
| Gene Sequence |
| Protein sequence |
