Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37792.t1 | XP_024641689.1 | 93.6 | 342 | 22 | 0 | 40 | 381 | 1 | 342 | 3.70E-193 | 684.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37792.t1 | Q68EV0 | 34.3 | 324 | 185 | 5 | 48 | 369 | 4 | 301 | 3.7e-48 | 193.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37792.t1 | A0A396HGY1 | 93.6 | 342 | 22 | 0 | 40 | 381 | 1 | 342 | 2.7e-193 | 684.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05149 | MS.gene37792 | 0.828831 | 7.22E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 81 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATGGCTGGTTGTTGTTTC+TGG | 0.090446 | 6.3:-72896430 | MS.gene37792:CDS |
| TCTTACGATCCTTCAATATT+AGG | 0.134322 | 6.3:-72897167 | MS.gene37792:CDS |
| AACAGCTAAATTTCTTAAAA+AGG | 0.184665 | 6.3:-72896269 | MS.gene37792:CDS |
| GTACATTGTGGAAAACATTT+AGG | 0.186018 | 6.3:+72898808 | None:intergenic |
| AACTTACCATTTGGGCAGTT+TGG | 0.229786 | 6.3:-72896486 | MS.gene37792:CDS |
| CAACCTCTTCTTCTTCTTGA+TGG | 0.262050 | 6.3:-72901367 | MS.gene37792:CDS |
| TTCTCGATGCACATGCAATT+TGG | 0.276741 | 6.3:-72896357 | MS.gene37792:CDS |
| CTTACGATCCTTCAATATTA+GGG | 0.278760 | 6.3:-72897166 | MS.gene37792:CDS |
| ACTTACCATTTGGGCAGTTT+GGG | 0.292572 | 6.3:-72896485 | MS.gene37792:CDS |
| GCCTTCTTCCCATCTCTTAG+AGG | 0.292892 | 6.3:+72898219 | None:intergenic |
| TACATTGTGGAAAACATTTA+GGG | 0.297703 | 6.3:+72898809 | None:intergenic |
| CTGTCAAGTATCATGGTAAA+TGG | 0.300571 | 6.3:-72898636 | MS.gene37792:CDS |
| AACTTCTACAAACTAGATTA+TGG | 0.330012 | 6.3:-72897075 | MS.gene37792:intron |
| ATAATACAAAAGAATGAAAA+AGG | 0.340585 | 6.3:+72898248 | None:intergenic |
| CTATTCCCTTAACATACATT+TGG | 0.361915 | 6.3:-72896324 | MS.gene37792:CDS |
| CCGTGGCTCAACTTACCATT+TGG | 0.367129 | 6.3:-72896495 | MS.gene37792:CDS |
| GAGGGAAATCATATATTTCT+AGG | 0.374958 | 6.3:+72896392 | None:intergenic |
| TTTCACTCAACTCTTGGCTC+TGG | 0.382079 | 6.3:-72898155 | MS.gene37792:CDS |
| ATAAGACAATGCGAGGAAAC+TGG | 0.387233 | 6.3:-72898841 | MS.gene37792:CDS |
| GTGATGCCGATCCTCTTTAC+AGG | 0.394384 | 6.3:-72901275 | MS.gene37792:intron |
| TGATCACAAAAGCAATCAAC+GGG | 0.395327 | 6.3:+72897115 | None:intergenic |
| ACTCCACCAAATGTATGTTA+AGG | 0.401653 | 6.3:+72896318 | None:intergenic |
| ACCATTTGGGCAGTTTGGGC+TGG | 0.417057 | 6.3:-72896481 | MS.gene37792:CDS |
| GGATGAGGCTACCAGAGTTA+TGG | 0.436327 | 6.3:-72897145 | MS.gene37792:CDS |
| TTCCCTTAACATACATTTGG+TGG | 0.438319 | 6.3:-72896321 | MS.gene37792:CDS |
| CGTGGCTCAACTTACCATTT+GGG | 0.439338 | 6.3:-72896494 | MS.gene37792:CDS |
| CTCCACCAAATGTATGTTAA+GGG | 0.448284 | 6.3:+72896319 | None:intergenic |
| GCTGAGAAAGCCACAGAAGC+AGG | 0.449741 | 6.3:+72898306 | None:intergenic |
| CATTTACCATGATACTTGAC+AGG | 0.452645 | 6.3:+72898637 | None:intergenic |
| ATCCTTCACGATGGAAGTTA+TGG | 0.453976 | 6.3:-72896447 | MS.gene37792:CDS |
| TCGTCAGATGGAGAACTTGT+TGG | 0.456717 | 6.3:-72898781 | MS.gene37792:CDS |
| ACCAGCCCAAACTGCCCAAA+TGG | 0.456858 | 6.3:+72896480 | None:intergenic |
| ATTATGAGTATGCTAGTTTG+TGG | 0.458813 | 6.3:-72898194 | MS.gene37792:CDS |
| TATGATTTCCCTCCTTATGA+AGG | 0.467574 | 6.3:-72896382 | MS.gene37792:CDS |
| TATAAACTTCCTCTAAGAGA+TGG | 0.487407 | 6.3:-72898228 | MS.gene37792:CDS |
| AGCCTCATCCCTAATATTGA+AGG | 0.491493 | 6.3:+72897158 | None:intergenic |
| TATTTAGGAGCCTGCTTCTG+TGG | 0.491634 | 6.3:-72898316 | MS.gene37792:intron |
| CTCGAAGGAGAAGTTGTTAA+CGG | 0.496529 | 6.3:+72901462 | None:intergenic |
| CTTGACCCTGTCAAGTATCA+TGG | 0.497754 | 6.3:-72898643 | MS.gene37792:CDS |
| TCATCTGCAGTGATTCTCCT+TGG | 0.510341 | 6.3:-72897210 | MS.gene37792:CDS |
| TCCTCTAAGAGATGGGAAGA+AGG | 0.514194 | 6.3:-72898220 | MS.gene37792:CDS |
| TTCACGATGGAAGTTATGGC+TGG | 0.528309 | 6.3:-72896443 | MS.gene37792:CDS |
| ATCCTTCAATATTAGGGATG+AGG | 0.530935 | 6.3:-72897160 | MS.gene37792:CDS |
| AATATTGAAGGATCGTAAGA+TGG | 0.539049 | 6.3:+72897170 | None:intergenic |
| ATCGTAAGATGGCTAAAATG+AGG | 0.545275 | 6.3:+72897181 | None:intergenic |
| ATAAACTTCCTCTAAGAGAT+GGG | 0.548900 | 6.3:-72898227 | MS.gene37792:CDS |
| AGAAGTTGATGTACATTACA+TGG | 0.549223 | 6.3:+72897091 | None:intergenic |
| TAAAGAGGATCGGCATCACC+AGG | 0.551831 | 6.3:+72901279 | None:intergenic |
| GAGAACTTGTTGGTCGTCCA+TGG | 0.552437 | 6.3:-72898771 | MS.gene37792:CDS |
| AGGGAAAAGTACCTGTAAAG+AGG | 0.561562 | 6.3:+72901264 | None:intergenic |
| GCATCGAGAAGTCCTTCATA+AGG | 0.561840 | 6.3:+72896370 | None:intergenic |
| GCACTTACAAGTAAGCTACT+TGG | 0.571996 | 6.3:+72896246 | None:intergenic |
| ATCGTAATTGATGCTAGTCC+TGG | 0.575162 | 6.3:-72901297 | MS.gene37792:CDS |
| TGCGAGGAAACTGGATGTGT+TGG | 0.582926 | 6.3:-72898832 | MS.gene37792:CDS |
| TATCCATCAAGAAGAAGAAG+AGG | 0.584191 | 6.3:+72901364 | None:intergenic |
| TTTCTCTATCAAGCATGCAG+TGG | 0.584648 | 6.3:+72898686 | None:intergenic |
| CATATGTAACTTACCTACTG+TGG | 0.588627 | 6.3:+72898121 | None:intergenic |
| CATGATACTTGACAGGGTCA+AGG | 0.591862 | 6.3:+72898644 | None:intergenic |
| CTAAAATGAGGGAGTATCCA+AGG | 0.593952 | 6.3:+72897193 | None:intergenic |
| GTATGTTAAGGGAATAGTTG+TGG | 0.603114 | 6.3:+72896330 | None:intergenic |
| TCGAGAAGTCCTTCATAAGG+AGG | 0.604735 | 6.3:+72896373 | None:intergenic |
| TCGTAAGATGGCTAAAATGA+GGG | 0.605546 | 6.3:+72897182 | None:intergenic |
| AAAGTACCTGTAAAGAGGAT+CGG | 0.606814 | 6.3:+72901269 | None:intergenic |
| CGGGGCAGAAACCATAACTC+TGG | 0.610048 | 6.3:+72897134 | None:intergenic |
| GTGATCACAAAAGCAATCAA+CGG | 0.610273 | 6.3:+72897114 | None:intergenic |
| AGCCATAACTTCCATCGTGA+AGG | 0.613960 | 6.3:+72896445 | None:intergenic |
| CGAGAAGTCCTTCATAAGGA+GGG | 0.624546 | 6.3:+72896374 | None:intergenic |
| TATGACAGTTTGTGTAGTGA+TGG | 0.624699 | 6.3:-72896518 | MS.gene37792:CDS |
| AGTGGTTCTTGCATGTACCA+TGG | 0.631121 | 6.3:+72898754 | None:intergenic |
| GCGAAGATGGTGAATAGATG+CGG | 0.632363 | 6.3:+72901418 | None:intergenic |
| CCAAATGGTAAGTTGAGCCA+CGG | 0.636648 | 6.3:+72896495 | None:intergenic |
| AAGAACCACTATATTTACAA+TGG | 0.649854 | 6.3:-72898741 | MS.gene37792:CDS |
| TGGCTGGTTGTTGTTTCTGG+CGG | 0.650477 | 6.3:-72896427 | MS.gene37792:CDS |
| GAGTTGTATAAGACAATGCG+AGG | 0.653344 | 6.3:-72898848 | MS.gene37792:CDS |
| GAGCATTGTGACGATCTCGA+AGG | 0.663410 | 6.3:+72901447 | None:intergenic |
| ATTTACCATGATACTTGACA+GGG | 0.679041 | 6.3:+72898638 | None:intergenic |
| GAAGTTGATGTACATTACAT+GGG | 0.690104 | 6.3:+72897092 | None:intergenic |
| ATATTTCTAGGAGCATTGCG+AGG | 0.700874 | 6.3:+72896404 | None:intergenic |
| AGTTTGTGTAGTGATGGCCG+TGG | 0.702965 | 6.3:-72896512 | MS.gene37792:CDS |
| TTAGTTGTCATCCTTCACGA+TGG | 0.713587 | 6.3:-72896456 | MS.gene37792:CDS |
| GATCACAAAAGCAATCAACG+GGG | 0.820716 | 6.3:+72897116 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAAAAAAAAAAATT+AGG | + | chr6.3:72896521-72896540 | None:intergenic | 0.0% |
| !!! | TTAATTTTATATTAAATATA+TGG | + | chr6.3:72900043-72900062 | None:intergenic | 0.0% |
| !! | AAAAAAAAAAAAAAATTAGG+TGG | + | chr6.3:72896518-72896537 | None:intergenic | 10.0% |
| !! | ATCAATTAAATATAATACTT+TGG | + | chr6.3:72898483-72898502 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTACAATTGA+AGG | - | chr6.3:72896528-72896547 | MS.gene37792:CDS | 10.0% |
| !! | ACTAAGATAATAAATAGTTA+AGG | + | chr6.3:72900974-72900993 | None:intergenic | 15.0% |
| !! | ATAAATCTTATGATACTATT+TGG | + | chr6.3:72897344-72897363 | None:intergenic | 15.0% |
| !! | ATAAATGAATTTGAATGAAA+AGG | + | chr6.3:72896487-72896506 | None:intergenic | 15.0% |
| !! | ATAATACAAAAGAATGAAAA+AGG | + | chr6.3:72899483-72899502 | None:intergenic | 15.0% |
| !! | ATATTTACAATGGAAAAAAT+GGG | - | chr6.3:72898997-72899016 | MS.gene37792:intron | 15.0% |
| !! | CAATATAAAGATTATATGAA+AGG | + | chr6.3:72900684-72900703 | None:intergenic | 15.0% |
| !! | CTAAGATAATAAATAGTTAA+GGG | + | chr6.3:72900973-72900992 | None:intergenic | 15.0% |
| !! | GAAACAAAAAAATGTAAAAA+AGG | + | chr6.3:72897491-72897510 | None:intergenic | 15.0% |
| !! | TAAATCTTATGATACTATTT+GGG | + | chr6.3:72897343-72897362 | None:intergenic | 15.0% |
| !! | TAAATGAATTTGAATGAAAA+GGG | + | chr6.3:72896486-72896505 | None:intergenic | 15.0% |
| !! | TATAATCTTTATATTGTGAT+TGG | - | chr6.3:72900688-72900707 | MS.gene37792:intron | 15.0% |
| !! | TATATTTACAATGGAAAAAA+TGG | - | chr6.3:72898996-72899015 | MS.gene37792:intron | 15.0% |
| !!! | GTTTTTGCTTTTAAAATTAA+AGG | - | chr6.3:72899869-72899888 | MS.gene37792:intron | 15.0% |
| !!! | TTTATTTTACCTTTTGTTAT+AGG | + | chr6.3:72897712-72897731 | None:intergenic | 15.0% |
| !! | AACAGCTAAATTTCTTAAAA+AGG | - | chr6.3:72901459-72901478 | MS.gene37792:CDS | 20.0% |
| !! | AATAAAGTTATTCATCCAAA+TGG | + | chr6.3:72897637-72897656 | None:intergenic | 20.0% |
| !! | ATAAAGTTATTCATCCAAAT+GGG | + | chr6.3:72897636-72897655 | None:intergenic | 20.0% |
| !! | CATATATATTAATTGTCTAC+AGG | + | chr6.3:72900275-72900294 | None:intergenic | 20.0% |
| !! | CATCAAAATTAACAGTTTAT+TGG | + | chr6.3:72900921-72900940 | None:intergenic | 20.0% |
| !! | CTGTAGACAATTAATATATA+TGG | - | chr6.3:72900273-72900292 | MS.gene37792:intron | 20.0% |
| !! | GAATAAAGAAAACACAAAAA+AGG | + | chr6.3:72898739-72898758 | None:intergenic | 20.0% |
| !! | GTTCTATAAGTTTAAACAAA+AGG | + | chr6.3:72899374-72899393 | None:intergenic | 20.0% |
| !! | TATACAAAATCCAAAAATTC+TGG | + | chr6.3:72896570-72896589 | None:intergenic | 20.0% |
| !!! | AAGTTCTCTAAAATAGTTTA+TGG | + | chr6.3:72897262-72897281 | None:intergenic | 20.0% |
| !!! | AATAAATTTTAATGTGCCAA+GGG | + | chr6.3:72899842-72899861 | None:intergenic | 20.0% |
| !!! | AGATATATTGGTAATTTGAA+TGG | - | chr6.3:72898422-72898441 | MS.gene37792:intron | 20.0% |
| !!! | CAGTGAGATTTTTTTATTTT+TGG | - | chr6.3:72898820-72898839 | MS.gene37792:CDS | 20.0% |
| !!! | TAATAAATTTTAATGTGCCA+AGG | + | chr6.3:72899843-72899862 | None:intergenic | 20.0% |
| !!! | TTTCAATTTTTTAACCAATC+TGG | - | chr6.3:72897507-72897526 | MS.gene37792:intron | 20.0% |
| !!! | TTTTTCCATTGTAAATATAG+TGG | + | chr6.3:72898995-72899014 | None:intergenic | 20.0% |
| ! | AAACACAAAAAAGGAACAAA+AGG | + | chr6.3:72898730-72898749 | None:intergenic | 25.0% |
| ! | AAATCTCACTGAAATCATAA+AGG | + | chr6.3:72898811-72898830 | None:intergenic | 25.0% |
| ! | AACTATAATAACTACCAGAT+TGG | + | chr6.3:72897524-72897543 | None:intergenic | 25.0% |
| ! | AACTTCTACAAACTAGATTA+TGG | - | chr6.3:72900653-72900672 | MS.gene37792:intron | 25.0% |
| ! | AAGAACCACTATATTTACAA+TGG | - | chr6.3:72898987-72899006 | MS.gene37792:intron | 25.0% |
| ! | AATAAGCTGAAAAAAGCTTA+TGG | - | chr6.3:72897287-72897306 | MS.gene37792:intron | 25.0% |
| ! | ACAAGAAACACTAGATATAT+TGG | - | chr6.3:72898410-72898429 | MS.gene37792:intron | 25.0% |
| ! | ACATATCTAGTTATCTAGTT+CGG | - | chr6.3:72896671-72896690 | MS.gene37792:intron | 25.0% |
| ! | ACTAGATATGTTCAATTGTT+CGG | + | chr6.3:72896662-72896681 | None:intergenic | 25.0% |
| ! | ATCGTATATCACATCAATAT+CGG | - | chr6.3:72899278-72899297 | MS.gene37792:intron | 25.0% |
| ! | CAACAAAAAACACATTCTTT+GGG | - | chr6.3:72898048-72898067 | MS.gene37792:intron | 25.0% |
| ! | GTAGACTAATTAACATTTCA+TGG | + | chr6.3:72898552-72898571 | None:intergenic | 25.0% |
| ! | TAAAGTTATTCATCCAAATG+GGG | + | chr6.3:72897635-72897654 | None:intergenic | 25.0% |
| ! | TACAGTATTCCTATAACAAA+AGG | - | chr6.3:72897700-72897719 | MS.gene37792:intron | 25.0% |
| ! | TACATTGTGGAAAACATTTA+GGG | + | chr6.3:72898922-72898941 | None:intergenic | 25.0% |
| ! | TTAAACTTATAGAACTGATG+TGG | - | chr6.3:72899379-72899398 | MS.gene37792:intron | 25.0% |
| ! | TTCTTGTGTTAGTAATTTGA+TGG | + | chr6.3:72898397-72898416 | None:intergenic | 25.0% |
| ! | TTGCAATTTCGATACATATA+GGG | + | chr6.3:72897984-72898003 | None:intergenic | 25.0% |
| ! | TTTGCAATTTCGATACATAT+AGG | + | chr6.3:72897985-72898004 | None:intergenic | 25.0% |
| !! | ATTTGAATGGTAGTGATTTA+AGG | - | chr6.3:72898435-72898454 | MS.gene37792:intron | 25.0% |
| !! | CTTTTGTTGGTATATGAAAT+TGG | + | chr6.3:72900162-72900181 | None:intergenic | 25.0% |
| !! | GATTTGTGATTTGACAATTT+TGG | - | chr6.3:72897830-72897849 | MS.gene37792:intron | 25.0% |
| !!! | GAAATGACATTTTTTCATTG+TGG | + | chr6.3:72898216-72898235 | None:intergenic | 25.0% |
| !!! | GTTGTTTTCGTAAACAATTT+TGG | - | chr6.3:72896952-72896971 | MS.gene37792:intron | 25.0% |
| !!! | TAACAGTTTATTGGTTTTCT+TGG | + | chr6.3:72900912-72900931 | None:intergenic | 25.0% |
| !!! | TATGTTAATTTTTAGTCCCT+TGG | - | chr6.3:72899823-72899842 | MS.gene37792:intron | 25.0% |
| !!! | TGATACTCAAATCTGTTTTT+AGG | + | chr6.3:72898085-72898104 | None:intergenic | 25.0% |
| !!! | TTTAGCTTGTCATTTTGATT+TGG | - | chr6.3:72899671-72899690 | MS.gene37792:intron | 25.0% |
| AAATGAAAACATAAGGTGCA+TGG | + | chr6.3:72899153-72899172 | None:intergenic | 30.0% | |
| AAGCAAACAAGAAAAAAGTG+AGG | + | chr6.3:72898850-72898869 | None:intergenic | 30.0% | |
| ACTTCCATATAGGAACTAAA+AGG | + | chr6.3:72899767-72899786 | None:intergenic | 30.0% | |
| AGACACCAAATGAAAACATA+AGG | + | chr6.3:72899160-72899179 | None:intergenic | 30.0% | |
| ATTTACCATGATACTTGACA+GGG | + | chr6.3:72899093-72899112 | None:intergenic | 30.0% | |
| CAAAAAAAGTTGAACACCTT+TGG | - | chr6.3:72896822-72896841 | MS.gene37792:intron | 30.0% | |
| CCAACAAAAAACACATTCTT+TGG | - | chr6.3:72898047-72898066 | MS.gene37792:intron | 30.0% | |
| CCATAGTGAATGTATATAGA+AGG | + | chr6.3:72898600-72898619 | None:intergenic | 30.0% | |
| CCTTCTATATACATTCACTA+TGG | - | chr6.3:72898597-72898616 | MS.gene37792:intron | 30.0% | |
| CTATTCCCTTAACATACATT+TGG | - | chr6.3:72901404-72901423 | MS.gene37792:CDS | 30.0% | |
| CTTACGATCCTTCAATATTA+GGG | - | chr6.3:72900562-72900581 | MS.gene37792:intron | 30.0% | |
| GACAACTAAAAAGAAACAGA+CGG | + | chr6.3:72900867-72900886 | None:intergenic | 30.0% | |
| GAGGGAAATCATATATTTCT+AGG | + | chr6.3:72901339-72901358 | None:intergenic | 30.0% | |
| GATAATTTCTTGAACATGCT+AGG | + | chr6.3:72900350-72900369 | None:intergenic | 30.0% | |
| GCAACATCATAATAACAACA+AGG | - | chr6.3:72898641-72898660 | MS.gene37792:CDS | 30.0% | |
| GCTTTCAATCAAATTGTACA+GGG | - | chr6.3:72901182-72901201 | MS.gene37792:intron | 30.0% | |
| GTAACTTCAAACTTCCATAT+AGG | + | chr6.3:72899777-72899796 | None:intergenic | 30.0% | |
| GTACATTGTGGAAAACATTT+AGG | + | chr6.3:72898923-72898942 | None:intergenic | 30.0% | |
| GTCCAAAAAATTATCGATCT+CGG | + | chr6.3:72899990-72900009 | None:intergenic | 30.0% | |
| GTGTATTTCATTAGTCAGTT+TGG | - | chr6.3:72898370-72898389 | MS.gene37792:intron | 30.0% | |
| TAAGATGAAACGAAGTTCAA+TGG | + | chr6.3:72897427-72897446 | None:intergenic | 30.0% | |
| TACCAACAAAAGAGACTTAA+GGG | + | chr6.3:72898013-72898032 | None:intergenic | 30.0% | |
| TAGTGAATGTATATAGAAGG+AGG | + | chr6.3:72898597-72898616 | None:intergenic | 30.0% | |
| TCATATACCAACAAAAGTCA+AGG | - | chr6.3:72900165-72900184 | MS.gene37792:intron | 30.0% | |
| TCATTCTGTGATGAGTTAAA+TGG | - | chr6.3:72901160-72901179 | MS.gene37792:intron | 30.0% | |
| TCTTAAAACCTTGTGATAAG+TGG | + | chr6.3:72897806-72897825 | None:intergenic | 30.0% | |
| TCTTACGATCCTTCAATATT+AGG | - | chr6.3:72900561-72900580 | MS.gene37792:intron | 30.0% | |
| TCTTTATATTGTGATTGGTG+AGG | - | chr6.3:72900693-72900712 | MS.gene37792:intron | 30.0% | |
| TCTTTGCAGTAAATGGTTAA+AGG | - | chr6.3:72901007-72901026 | MS.gene37792:intron | 30.0% | |
| TGAAAAAACTTTACCACACT+TGG | - | chr6.3:72896994-72897013 | MS.gene37792:intron | 30.0% | |
| TGAACTTCGTTTCATCTTAT+GGG | - | chr6.3:72897428-72897447 | MS.gene37792:intron | 30.0% | |
| TTACCAACAAAAGAGACTTA+AGG | + | chr6.3:72898014-72898033 | None:intergenic | 30.0% | |
| TTGAACTTCGTTTCATCTTA+TGG | - | chr6.3:72897427-72897446 | MS.gene37792:intron | 30.0% | |
| TTGCAATTGGGATAATAGTT+GGG | + | chr6.3:72898273-72898292 | None:intergenic | 30.0% | |
| TTGGGACAACTTATAAAAAC+AGG | + | chr6.3:72897325-72897344 | None:intergenic | 30.0% | |
| TTTGCAATTGGGATAATAGT+TGG | + | chr6.3:72898274-72898293 | None:intergenic | 30.0% | |
| ! | AATCTTGCAATGCATTTTCA+TGG | - | chr6.3:72899449-72899468 | MS.gene37792:intron | 30.0% |
| ! | ATAAACTTCCTCTAAGAGAT+GGG | - | chr6.3:72899501-72899520 | MS.gene37792:intron | 30.0% |
| ! | ATGCACCTTATGTTTTCATT+TGG | - | chr6.3:72899152-72899171 | MS.gene37792:intron | 30.0% |
| ! | ATTATGAGTATGCTAGTTTG+TGG | - | chr6.3:72899534-72899553 | MS.gene37792:intron | 30.0% |
| ! | CATATCTAGTTATCTAGTTC+GGG | - | chr6.3:72896672-72896691 | MS.gene37792:intron | 30.0% |
| ! | CTTAAGATACGTTTTACTCA+AGG | + | chr6.3:72900748-72900767 | None:intergenic | 30.0% |
| ! | TAACTGCTATTTGACAATAC+TGG | - | chr6.3:72899332-72899351 | MS.gene37792:intron | 30.0% |
| ! | TATAAACTTCCTCTAAGAGA+TGG | - | chr6.3:72899500-72899519 | MS.gene37792:intron | 30.0% |
| !! | AGAAGTTGATGTACATTACA+TGG | + | chr6.3:72900640-72900659 | None:intergenic | 30.0% |
| !! | GAAGTTGATGTACATTACAT+GGG | + | chr6.3:72900639-72900658 | None:intergenic | 30.0% |
| !! | GATTTTGATGCCAGAATTTT+TGG | - | chr6.3:72896557-72896576 | MS.gene37792:intron | 30.0% |
| !! | TGTGGTGTATCCTTTTATTT+AGG | - | chr6.3:72899397-72899416 | MS.gene37792:intron | 30.0% |
| !! | TTGATTTTAGGTAGTGTCAA+TGG | - | chr6.3:72899711-72899730 | MS.gene37792:intron | 30.0% |
| !!! | CACTTTTTTCTTGTTTGCTT+TGG | - | chr6.3:72898850-72898869 | MS.gene37792:CDS | 30.0% |
| !!! | CCAAAGAATGTGTTTTTTGT+TGG | + | chr6.3:72898050-72898069 | None:intergenic | 30.0% |
| !!! | GATACCTTTTAGTTCCTATA+TGG | - | chr6.3:72899760-72899779 | MS.gene37792:intron | 30.0% |
| AAACTTTACCACACTTGGAT+TGG | - | chr6.3:72896999-72897018 | MS.gene37792:intron | 35.0% | |
| AAAGCACGTCTCATACATAT+AGG | + | chr6.3:72897952-72897971 | None:intergenic | 35.0% | |
| AAATAAGCCAATCCAAGGAT+GGG | - | chr6.3:72897385-72897404 | MS.gene37792:intron | 35.0% | |
| AACTTGTAACCAAAACGAAG+TGG | + | chr6.3:72897567-72897586 | None:intergenic | 35.0% | |
| AAGCACGTCTCATACATATA+GGG | + | chr6.3:72897951-72897970 | None:intergenic | 35.0% | |
| ACTAAGAAAAGAGACACTAG+TGG | - | chr6.3:72898110-72898129 | MS.gene37792:intron | 35.0% | |
| ACTCCACCAAATGTATGTTA+AGG | + | chr6.3:72901413-72901432 | None:intergenic | 35.0% | |
| ACTTGTAACCAAAACGAAGT+GGG | + | chr6.3:72897566-72897585 | None:intergenic | 35.0% | |
| AGCGACAATTAAAAGAGAAC+AGG | - | chr6.3:72901110-72901129 | MS.gene37792:intron | 35.0% | |
| ATAACAAGCCACTTATCACA+AGG | - | chr6.3:72897795-72897814 | MS.gene37792:intron | 35.0% | |
| ATAAGCTGTGTATCCAAACA+AGG | + | chr6.3:72897129-72897148 | None:intergenic | 35.0% | |
| ATCCCAAAAATACGCTTGAA+TGG | + | chr6.3:72899118-72899137 | None:intergenic | 35.0% | |
| ATCCTTCAATATTAGGGATG+AGG | - | chr6.3:72900568-72900587 | MS.gene37792:intron | 35.0% | |
| CATATGTAACTTACCTACTG+TGG | + | chr6.3:72899610-72899629 | None:intergenic | 35.0% | |
| CATTTACCATGATACTTGAC+AGG | + | chr6.3:72899094-72899113 | None:intergenic | 35.0% | |
| CCTAAAATCAATCAGAGTCT+TGG | + | chr6.3:72899702-72899721 | None:intergenic | 35.0% | |
| CTCCACCAAATGTATGTTAA+GGG | + | chr6.3:72901412-72901431 | None:intergenic | 35.0% | |
| CTGTCAAGTATCATGGTAAA+TGG | - | chr6.3:72899092-72899111 | MS.gene37792:intron | 35.0% | |
| GGCTTTCAATCAAATTGTAC+AGG | - | chr6.3:72901181-72901200 | MS.gene37792:intron | 35.0% | |
| GGTACTACTATTTCCTTCTA+AGG | + | chr6.3:72897594-72897613 | None:intergenic | 35.0% | |
| GTACCCATTATAGTAGAGTT+AGG | - | chr6.3:72897609-72897628 | MS.gene37792:intron | 35.0% | |
| GTATGTTAAGGGAATAGTTG+TGG | + | chr6.3:72901401-72901420 | None:intergenic | 35.0% | |
| GTGATCACAAAAGCAATCAA+CGG | + | chr6.3:72900617-72900636 | None:intergenic | 35.0% | |
| TACCAACAAAAGTCAAGGAT+TGG | - | chr6.3:72900170-72900189 | MS.gene37792:intron | 35.0% | |
| TATCCATCAAGAAGAAGAAG+AGG | + | chr6.3:72896367-72896386 | None:intergenic | 35.0% | |
| TATGACAGTTTGTGTAGTGA+TGG | - | chr6.3:72901210-72901229 | MS.gene37792:intron | 35.0% | |
| TATGATTTCCCTCCTTATGA+AGG | - | chr6.3:72901346-72901365 | MS.gene37792:CDS | 35.0% | |
| TCATCTTATGGGAGTTCATT+AGG | - | chr6.3:72897439-72897458 | MS.gene37792:intron | 35.0% | |
| TGATCACAAAAGCAATCAAC+GGG | + | chr6.3:72900616-72900635 | None:intergenic | 35.0% | |
| TTACAAGTTTGGACCTTAGA+AGG | - | chr6.3:72897578-72897597 | MS.gene37792:intron | 35.0% | |
| TTCAATCAAATTGTACAGGG+TGG | - | chr6.3:72901185-72901204 | MS.gene37792:intron | 35.0% | |
| TTCCCTTAACATACATTTGG+TGG | - | chr6.3:72901407-72901426 | MS.gene37792:CDS | 35.0% | |
| ! | AAACGAAGATTTTGCGAAGA+TGG | + | chr6.3:72896326-72896345 | None:intergenic | 35.0% |
| ! | AAAGTACCTGTAAAGAGGAT+CGG | + | chr6.3:72896462-72896481 | None:intergenic | 35.0% |
| ! | AACAAAAGTCAAGGATTGGT+CGG | - | chr6.3:72900174-72900193 | MS.gene37792:intron | 35.0% |
| ! | AGTGGGACATTTGAAATTGA+TGG | + | chr6.3:72897549-72897568 | None:intergenic | 35.0% |
| ! | ATCCCTTAAGTCTCTTTTGT+TGG | - | chr6.3:72898008-72898027 | MS.gene37792:intron | 35.0% |
| ! | ATTCGGGGAATTTTTGCAAT+TGG | + | chr6.3:72898286-72898305 | None:intergenic | 35.0% |
| ! | GTTTTTCTCGTTAGTTACTG+TGG | - | chr6.3:72898338-72898357 | MS.gene37792:intron | 35.0% |
| ! | TAGTACAGTACAGCATTTTC+AGG | + | chr6.3:72898510-72898529 | None:intergenic | 35.0% |
| ! | TCTGACGAAAAAGTACATTG+TGG | + | chr6.3:72898935-72898954 | None:intergenic | 35.0% |
| ! | TCTTGTTTGCTTTGGATATC+AGG | - | chr6.3:72898858-72898877 | MS.gene37792:intron | 35.0% |
| ! | TTCGGGGAATTTTTGCAATT+GGG | + | chr6.3:72898285-72898304 | None:intergenic | 35.0% |
| ! | TTTTCATTGTGGTAATCAGC+AGG | + | chr6.3:72898205-72898224 | None:intergenic | 35.0% |
| !! | ACATTTGGTGGAGTTTTATC+AGG | - | chr6.3:72901419-72901438 | MS.gene37792:CDS | 35.0% |
| !! | ATCAGCATTTGGTAATGAAG+TGG | + | chr6.3:72898181-72898200 | None:intergenic | 35.0% |
| !! | ATGATGTTGCTATCGACTTA+GGG | + | chr6.3:72898631-72898650 | None:intergenic | 35.0% |
| !! | CAATTTTGGCCTTCAGTATA+CGG | - | chr6.3:72897844-72897863 | MS.gene37792:intron | 35.0% |
| !! | CATTTGGTGGAGTTTTATCA+GGG | - | chr6.3:72901420-72901439 | MS.gene37792:CDS | 35.0% |
| !! | CCAAGACTCTGATTGATTTT+AGG | - | chr6.3:72899699-72899718 | MS.gene37792:intron | 35.0% |
| !! | CTAGGAGCATTAACATAGTT+GGG | + | chr6.3:72900332-72900351 | None:intergenic | 35.0% |
| !! | TATGATGTTGCTATCGACTT+AGG | + | chr6.3:72898632-72898651 | None:intergenic | 35.0% |
| !!! | CAATGTACTTTTTCGTCAGA+TGG | - | chr6.3:72898935-72898954 | MS.gene37792:intron | 35.0% |
| !!! | CTTCGTTTTGGTTACAAGTT+TGG | - | chr6.3:72897567-72897586 | MS.gene37792:intron | 35.0% |
| !!! | GAAAGAGTTTTGACTGACTT+AGG | - | chr6.3:72896755-72896774 | MS.gene37792:intron | 35.0% |
| !!! | GTCTAGGTTTTTTGTTGTTG+AGG | - | chr6.3:72899736-72899755 | MS.gene37792:intron | 35.0% |
| AACTTACCATTTGGGCAGTT+TGG | - | chr6.3:72901242-72901261 | MS.gene37792:intron | 40.0% | |
| ACAACACTGCATAGCTTCTA+TGG | + | chr6.3:72899192-72899211 | None:intergenic | 40.0% | |
| ACTTACCATTTGGGCAGTTT+GGG | - | chr6.3:72901243-72901262 | MS.gene37792:intron | 40.0% | |
| AGCCTCATCCCTAATATTGA+AGG | + | chr6.3:72900573-72900592 | None:intergenic | 40.0% | |
| AGCTCAAATAAGCCAATCCA+AGG | - | chr6.3:72897380-72897399 | MS.gene37792:intron | 40.0% | |
| AGGCAATGTGAATGAGAAAG+AGG | + | chr6.3:72897471-72897490 | None:intergenic | 40.0% | |
| AGTTCGCTCTTTGCAGTAAA+TGG | - | chr6.3:72901000-72901019 | MS.gene37792:intron | 40.0% | |
| ATAAGACAATGCGAGGAAAC+TGG | - | chr6.3:72898887-72898906 | MS.gene37792:intron | 40.0% | |
| ATAAGCTGCGTATCCAAACA+AGG | + | chr6.3:72896848-72896867 | None:intergenic | 40.0% | |
| ATAGATGATGTCTTTCCGAG+TGG | - | chr6.3:72898690-72898709 | MS.gene37792:CDS | 40.0% | |
| ATCCTTCACGATGGAAGTTA+TGG | - | chr6.3:72901281-72901300 | MS.gene37792:CDS | 40.0% | |
| ATCGTAATTGATGCTAGTCC+TGG | - | chr6.3:72896431-72896450 | MS.gene37792:CDS | 40.0% | |
| ATCTATGCCATTAACATCCG+TGG | - | chr6.3:72900781-72900800 | MS.gene37792:intron | 40.0% | |
| ATGACTAACGAGAGACATTC+GGG | + | chr6.3:72898302-72898321 | None:intergenic | 40.0% | |
| ATGTCTCTCGTTAGTCATCA+TGG | - | chr6.3:72898304-72898323 | MS.gene37792:CDS | 40.0% | |
| CAAATAAGCCAATCCAAGGA+TGG | - | chr6.3:72897384-72897403 | MS.gene37792:intron | 40.0% | |
| CAACCTCTTCTTCTTCTTGA+TGG | - | chr6.3:72896361-72896380 | MS.gene37792:CDS | 40.0% | |
| CACGACACTAATTCTAAGTG+AGG | + | chr6.3:72899895-72899914 | None:intergenic | 40.0% | |
| CTCGAAGGAGAAGTTGTTAA+CGG | + | chr6.3:72896269-72896288 | None:intergenic | 40.0% | |
| CTCGTTAGTTACTGTGGTTA+CGG | - | chr6.3:72898344-72898363 | MS.gene37792:intron | 40.0% | |
| CTTAGAATTAGTGTCGTGCT+AGG | - | chr6.3:72899897-72899916 | MS.gene37792:intron | 40.0% | |
| GAAGCAGGCTCCTAAATAAA+AGG | + | chr6.3:72899410-72899429 | None:intergenic | 40.0% | |
| GAGTTGTATAAGACAATGCG+AGG | - | chr6.3:72898880-72898899 | MS.gene37792:intron | 40.0% | |
| GATCACAAAAGCAATCAACG+GGG | + | chr6.3:72900615-72900634 | None:intergenic | 40.0% | |
| GATGACTAACGAGAGACATT+CGG | + | chr6.3:72898303-72898322 | None:intergenic | 40.0% | |
| GGGCCTAACTCTACTATAAT+GGG | + | chr6.3:72897615-72897634 | None:intergenic | 40.0% | |
| GTCTCATTCTCTGTTGAGTA+TGG | - | chr6.3:72900413-72900432 | MS.gene37792:intron | 40.0% | |
| TAATTGTCTACAGGACACCT+AGG | + | chr6.3:72900266-72900285 | None:intergenic | 40.0% | |
| TACGGTCTTTGCAGAATTTG+TGG | - | chr6.3:72897862-72897881 | MS.gene37792:intron | 40.0% | |
| TGAGCATCTTTGACCTTGTT+TGG | - | chr6.3:72897113-72897132 | MS.gene37792:CDS | 40.0% | |
| TTACTCGAACTCGTTAACTC+TGG | + | chr6.3:72896720-72896739 | None:intergenic | 40.0% | |
| TTAGTTGTCATCCTTCACGA+TGG | - | chr6.3:72901272-72901291 | MS.gene37792:intron | 40.0% | |
| TTCTCGATGCACATGCAATT+TGG | - | chr6.3:72901371-72901390 | MS.gene37792:CDS | 40.0% | |
| TTGTAACTAAGACCTAGAGC+AGG | + | chr6.3:72897060-72897079 | None:intergenic | 40.0% | |
| TTTACTGCAAAGAGCGAACT+AGG | + | chr6.3:72901000-72901019 | None:intergenic | 40.0% | |
| TTTCTCTATCAAGCATGCAG+TGG | + | chr6.3:72899045-72899064 | None:intergenic | 40.0% | |
| ! | AACAACAAGGCTTTGTCACT+AGG | - | chr6.3:72898654-72898673 | MS.gene37792:CDS | 40.0% |
| ! | CGTTCTTTTCACTCAACTCT+TGG | - | chr6.3:72899567-72899586 | MS.gene37792:intron | 40.0% |
| ! | GACCAATCCTTGACTTTTGT+TGG | + | chr6.3:72900175-72900194 | None:intergenic | 40.0% |
| ! | GGCCATTCAAGCGTATTTTT+GGG | - | chr6.3:72899113-72899132 | MS.gene37792:intron | 40.0% |
| ! | TCAAATGTCCCACTTCGTTT+TGG | - | chr6.3:72897555-72897574 | MS.gene37792:intron | 40.0% |
| ! | TGCAATGCATTTTCATGGCT+GGG | - | chr6.3:72899454-72899473 | MS.gene37792:intron | 40.0% |
| ! | TGGCCATTCAAGCGTATTTT+TGG | - | chr6.3:72899112-72899131 | MS.gene37792:intron | 40.0% |
| ! | TTGCAATGCATTTTCATGGC+TGG | - | chr6.3:72899453-72899472 | MS.gene37792:intron | 40.0% |
| !! | ACAAAAGTCAAGGATTGGTC+GGG | - | chr6.3:72900175-72900194 | MS.gene37792:intron | 40.0% |
| !! | AGGGAAAAGTACCTGTAAAG+AGG | + | chr6.3:72896467-72896486 | None:intergenic | 40.0% |
| !! | ATATTTCTAGGAGCATTGCG+AGG | + | chr6.3:72901327-72901346 | None:intergenic | 40.0% |
| !! | CTAAAATGAGGGAGTATCCA+AGG | + | chr6.3:72900538-72900557 | None:intergenic | 40.0% |
| !! | GCTAGGAGCATTAACATAGT+TGG | + | chr6.3:72900333-72900352 | None:intergenic | 40.0% |
| !! | TGCTATCGACTTAGGGTAAT+AGG | + | chr6.3:72898624-72898643 | None:intergenic | 40.0% |
| !! | TGTATATAGAAGGAGGCATC+AGG | + | chr6.3:72898590-72898609 | None:intergenic | 40.0% |
| !! | TTATGGCTGGTTGTTGTTTC+TGG | - | chr6.3:72901298-72901317 | MS.gene37792:CDS | 40.0% |
| !!! | CGCCGAGATCGATAATTTTT+TGG | - | chr6.3:72899985-72900004 | MS.gene37792:intron | 40.0% |
| AATCAGCAGGCATCAGCATT+TGG | + | chr6.3:72898192-72898211 | None:intergenic | 45.0% | |
| AGATTCAAGTGTCCCATCCT+TGG | + | chr6.3:72897400-72897419 | None:intergenic | 45.0% | |
| AGCCATAACTTCCATCGTGA+AGG | + | chr6.3:72901286-72901305 | None:intergenic | 45.0% | |
| AGTGGTTCTTGCATGTACCA+TGG | + | chr6.3:72898977-72898996 | None:intergenic | 45.0% | |
| CATGATACTTGACAGGGTCA+AGG | + | chr6.3:72899087-72899106 | None:intergenic | 45.0% | |
| CGAGAAGTCCTTCATAAGGA+GGG | + | chr6.3:72901357-72901376 | None:intergenic | 45.0% | |
| CGTGGCTCAACTTACCATTT+GGG | - | chr6.3:72901234-72901253 | MS.gene37792:intron | 45.0% | |
| CTGCAAAGACCGTATACTGA+AGG | + | chr6.3:72897856-72897875 | None:intergenic | 45.0% | |
| CTTGACCCTGTCAAGTATCA+TGG | - | chr6.3:72899085-72899104 | MS.gene37792:intron | 45.0% | |
| GATAGCACTCGACACATTGA+AGG | + | chr6.3:72898242-72898261 | None:intergenic | 45.0% | |
| GCACAAACCACGGATGTTAA+TGG | + | chr6.3:72900791-72900810 | None:intergenic | 45.0% | |
| GCATCGAGAAGTCCTTCATA+AGG | + | chr6.3:72901361-72901380 | None:intergenic | 45.0% | |
| GCGAAGATGGTGAATAGATG+CGG | + | chr6.3:72896313-72896332 | None:intergenic | 45.0% | |
| GGGGCCTAACTCTACTATAA+TGG | + | chr6.3:72897616-72897635 | None:intergenic | 45.0% | |
| GGTAGTGTCAATGGATGTCT+AGG | - | chr6.3:72899720-72899739 | MS.gene37792:intron | 45.0% | |
| TAGTAGAGTTAGGCCCCATT+TGG | - | chr6.3:72897619-72897638 | MS.gene37792:intron | 45.0% | |
| TATTTAGGAGCCTGCTTCTG+TGG | - | chr6.3:72899412-72899431 | MS.gene37792:intron | 45.0% | |
| TCATCTGCAGTGATTCTCCT+TGG | - | chr6.3:72900518-72900537 | MS.gene37792:intron | 45.0% | |
| TCGAGAAGTCCTTCATAAGG+AGG | + | chr6.3:72901358-72901377 | None:intergenic | 45.0% | |
| TCGTCAGATGGAGAACTTGT+TGG | - | chr6.3:72898947-72898966 | MS.gene37792:intron | 45.0% | |
| TGACTAACGAGAGACATTCG+GGG | + | chr6.3:72898301-72898320 | None:intergenic | 45.0% | |
| TGTTAGATCGACATCTCTGC+AGG | + | chr6.3:72900483-72900502 | None:intergenic | 45.0% | |
| TTCACGATGGAAGTTATGGC+TGG | - | chr6.3:72901285-72901304 | MS.gene37792:CDS | 45.0% | |
| TTTCACTCAACTCTTGGCTC+TGG | - | chr6.3:72899573-72899592 | MS.gene37792:intron | 45.0% | |
| ! | CCAAATGGTAAGTTGAGCCA+CGG | + | chr6.3:72901236-72901255 | None:intergenic | 45.0% |
| ! | GTTATAGCTCTACAGCGTAG+AGG | + | chr6.3:72899316-72899335 | None:intergenic | 45.0% |
| ! | TCCTCTAAGAGATGGGAAGA+AGG | - | chr6.3:72899508-72899527 | MS.gene37792:intron | 45.0% |
| ! | TCGTGCTAGGTTAGTCAATC+CGG | - | chr6.3:72899910-72899929 | MS.gene37792:intron | 45.0% |
| ! | TGTGACAGAAGCACAAACCA+CGG | + | chr6.3:72900801-72900820 | None:intergenic | 45.0% |
| !! | TGAACACCTTTGGCCTTGTT+TGG | - | chr6.3:72896832-72896851 | MS.gene37792:intron | 45.0% |
| !!! | CAAGCGTATTTTTGGGATGC+AGG | - | chr6.3:72899120-72899139 | MS.gene37792:intron | 45.0% |
| AGTTTGTGTAGTGATGGCCG+TGG | - | chr6.3:72901216-72901235 | MS.gene37792:intron | 50.0% | |
| CAAGTGTCCCATCCTTGGAT+TGG | + | chr6.3:72897395-72897414 | None:intergenic | 50.0% | |
| CCGTGGCTCAACTTACCATT+TGG | - | chr6.3:72901233-72901252 | MS.gene37792:intron | 50.0% | |
| CGACATCTCTGCAGGACAAT+AGG | + | chr6.3:72900475-72900494 | None:intergenic | 50.0% | |
| GACACCTAGGTAGTCAATCC+CGG | + | chr6.3:72900253-72900272 | None:intergenic | 50.0% | |
| GCCTTCTTCCCATCTCTTAG+AGG | + | chr6.3:72899512-72899531 | None:intergenic | 50.0% | |
| GCGTATCCAAACAAGGCCAA+AGG | + | chr6.3:72896841-72896860 | None:intergenic | 50.0% | |
| GGATGAGGCTACCAGAGTTA+TGG | - | chr6.3:72900583-72900602 | MS.gene37792:intron | 50.0% | |
| GTGATGCCGATCCTCTTTAC+AGG | - | chr6.3:72896453-72896472 | MS.gene37792:CDS | 50.0% | |
| TAAAGAGGATCGGCATCACC+AGG | + | chr6.3:72896452-72896471 | None:intergenic | 50.0% | |
| TGAGGCAGAGAATCGCATGT+AGG | - | chr6.3:72900711-72900730 | MS.gene37792:intron | 50.0% | |
| TGCGAGGAAACTGGATGTGT+TGG | - | chr6.3:72898896-72898915 | MS.gene37792:intron | 50.0% | |
| TTAGAGTGTGCTCCTGCTCT+AGG | - | chr6.3:72897045-72897064 | MS.gene37792:intron | 50.0% | |
| ! | CGTGCTAGGTTAGTCAATCC+GGG | - | chr6.3:72899911-72899930 | MS.gene37792:intron | 50.0% |
| ! | GAGCATTGTGACGATCTCGA+AGG | + | chr6.3:72896284-72896303 | None:intergenic | 50.0% |
| ! | TAGAGCAGGAGCACACTCTA+AGG | + | chr6.3:72897046-72897065 | None:intergenic | 50.0% |
| !! | GAGAACTTGTTGGTCGTCCA+TGG | - | chr6.3:72898957-72898976 | MS.gene37792:intron | 50.0% |
| !! | TGGCTGGTTGTTGTTTCTGG+CGG | - | chr6.3:72901301-72901320 | MS.gene37792:CDS | 50.0% |
| !! | TTGGATTGGCTTCGTGGTGT+TGG | - | chr6.3:72897013-72897032 | MS.gene37792:intron | 50.0% |
| !!! | GGAGTGCTGTTTTCCACAGT+AGG | - | chr6.3:72899594-72899613 | MS.gene37792:intron | 50.0% |
| ACCAGCCCAAACTGCCCAAA+TGG | + | chr6.3:72901251-72901270 | None:intergenic | 55.0% | |
| ACCATTTGGGCAGTTTGGGC+TGG | - | chr6.3:72901247-72901266 | MS.gene37792:intron | 55.0% | |
| CCACGAAGCCAATCCAAGTG+TGG | + | chr6.3:72897010-72897029 | None:intergenic | 55.0% | |
| CGGGGCAGAAACCATAACTC+TGG | + | chr6.3:72900597-72900616 | None:intergenic | 55.0% | |
| CTACCCGCTAACCCACTACT+GGG | + | chr6.3:72899959-72899978 | None:intergenic | 55.0% | |
| GCTGAGAAAGCCACAGAAGC+AGG | + | chr6.3:72899425-72899444 | None:intergenic | 55.0% | |
| GTCAATCCGGGATAGCAGTG+CGG | - | chr6.3:72899923-72899942 | MS.gene37792:intron | 55.0% | |
| TACCCGCTAACCCACTACTG+GGG | + | chr6.3:72899958-72899977 | None:intergenic | 55.0% | |
| !! | CCACACTTGGATTGGCTTCG+TGG | - | chr6.3:72897007-72897026 | MS.gene37792:intron | 55.0% |
| !! | TGGCTTCGTGGTGTTGGCTT+GGG | - | chr6.3:72897019-72897038 | MS.gene37792:intron | 55.0% |
| !! | TTGGCTTCGTGGTGTTGGCT+TGG | - | chr6.3:72897018-72897037 | MS.gene37792:intron | 55.0% |
| AGCCCAGAGGAAAACCGCGA+CGG | + | chr6.3:72900208-72900227 | None:intergenic | 60.0% | |
| CGCTAACCCACTACTGGGGT+CGG | + | chr6.3:72899954-72899973 | None:intergenic | 60.0% | |
| CGTGCCGGGATTGACTACCT+AGG | - | chr6.3:72900246-72900265 | MS.gene37792:intron | 60.0% | |
| GCTACCCGCTAACCCACTAC+TGG | + | chr6.3:72899960-72899979 | None:intergenic | 60.0% | |
| GTGACAAGCGATGCGCCACT+CGG | + | chr6.3:72898708-72898727 | None:intergenic | 60.0% | |
| ! | GTCCGTCGCGGTTTTCCTCT+GGG | - | chr6.3:72900203-72900222 | MS.gene37792:intron | 60.0% |
| !! | CGACCCCAGTAGTGGGTTAG+CGG | - | chr6.3:72899952-72899971 | MS.gene37792:intron | 60.0% |
| !! | GACCCCAGTAGTGGGTTAGC+GGG | - | chr6.3:72899953-72899972 | MS.gene37792:intron | 60.0% |
| !! | GTAGTGGGTTAGCGGGTAGC+AGG | - | chr6.3:72899960-72899979 | MS.gene37792:intron | 60.0% |
| AGAGGAGCGGATCAGCCCAG+AGG | + | chr6.3:72900221-72900240 | None:intergenic | 65.0% | |
| CAATCCCGGCACGATCCCAG+AGG | + | chr6.3:72900239-72900258 | None:intergenic | 65.0% | |
| CTGGGCTGATCCGCTCCTCT+GGG | - | chr6.3:72900221-72900240 | MS.gene37792:intron | 65.0% | |
| GCCACACCGCACTGCTATCC+CGG | + | chr6.3:72899932-72899951 | None:intergenic | 65.0% | |
| GTGTGGCCGACCCCAGTAGT+GGG | - | chr6.3:72899945-72899964 | MS.gene37792:intron | 65.0% | |
| TCCGGGATAGCAGTGCGGTG+TGG | - | chr6.3:72899928-72899947 | MS.gene37792:intron | 65.0% | |
| TCTGGGCTGATCCGCTCCTC+TGG | - | chr6.3:72900220-72900239 | MS.gene37792:intron | 65.0% | |
| ! | CGTCCGTCGCGGTTTTCCTC+TGG | - | chr6.3:72900202-72900221 | MS.gene37792:intron | 65.0% |
| CCGGCACGATCCCAGAGGAG+CGG | + | chr6.3:72900234-72900253 | None:intergenic | 70.0% | |
| GGTGTGGCCGACCCCAGTAG+TGG | - | chr6.3:72899944-72899963 | MS.gene37792:intron | 70.0% | |
| !! | CCGCTCCTCTGGGATCGTGC+CGG | - | chr6.3:72900231-72900250 | MS.gene37792:intron | 70.0% |
| !! | CGCTCCTCTGGGATCGTGCC+GGG | - | chr6.3:72900232-72900251 | MS.gene37792:intron | 70.0% |
| GGTCGGGATCGCGTCCGTCG+CGG | - | chr6.3:72900191-72900210 | MS.gene37792:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 72896261 | 72901489 | 72896261 | ID=MS.gene37792 |
| chr6.3 | mRNA | 72896261 | 72901489 | 72896261 | ID=MS.gene37792.t1;Parent=MS.gene37792 |
| chr6.3 | exon | 72901276 | 72901489 | 72901276 | ID=MS.gene37792.t1.exon1;Parent=MS.gene37792.t1 |
| chr6.3 | CDS | 72901276 | 72901489 | 72901276 | ID=cds.MS.gene37792.t1;Parent=MS.gene37792.t1 |
| chr6.3 | exon | 72898609 | 72898870 | 72898609 | ID=MS.gene37792.t1.exon2;Parent=MS.gene37792.t1 |
| chr6.3 | CDS | 72898609 | 72898870 | 72898609 | ID=cds.MS.gene37792.t1;Parent=MS.gene37792.t1 |
| chr6.3 | exon | 72898135 | 72898331 | 72898135 | ID=MS.gene37792.t1.exon3;Parent=MS.gene37792.t1 |
| chr6.3 | CDS | 72898135 | 72898331 | 72898135 | ID=cds.MS.gene37792.t1;Parent=MS.gene37792.t1 |
| chr6.3 | exon | 72897076 | 72897263 | 72897076 | ID=MS.gene37792.t1.exon4;Parent=MS.gene37792.t1 |
| chr6.3 | CDS | 72897076 | 72897263 | 72897076 | ID=cds.MS.gene37792.t1;Parent=MS.gene37792.t1 |
| chr6.3 | exon | 72896261 | 72896547 | 72896261 | ID=MS.gene37792.t1.exon5;Parent=MS.gene37792.t1 |
| chr6.3 | CDS | 72896261 | 72896547 | 72896261 | ID=cds.MS.gene37792.t1;Parent=MS.gene37792.t1 |
| Gene Sequence |
| Protein sequence |
