Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37855.t1 | XP_024640456.1 | 90.8 | 1375 | 122 | 3 | 1 | 1373 | 1 | 1372 | 0.00E+00 | 2514.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37855.t1 | Q7G9P4 | 60.8 | 1361 | 496 | 11 | 14 | 1370 | 3 | 1329 | 0.0e+00 | 1657.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37855.t1 | A0A396I152 | 90.8 | 1375 | 122 | 3 | 1 | 1373 | 1 | 1372 | 0.0e+00 | 2514.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene37855 | MS.gene052054 | PPI |
| MS.gene37855 | MS.gene31092 | PPI |
| MS.gene37855 | MS.gene78384 | PPI |
| MS.gene37855 | MS.gene45551 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37855.t1 | MTR_5g087390 | 89.665 | 1374 | 123 | 3 | 1 | 1373 | 1 | 1356 | 0.0 | 2544 |
| MS.gene37855.t1 | MTR_5g087410 | 78.400 | 1375 | 286 | 7 | 1 | 1370 | 1 | 1369 | 0.0 | 2170 |
| MS.gene37855.t1 | MTR_5g087410 | 77.484 | 1248 | 271 | 6 | 1 | 1244 | 1 | 1242 | 0.0 | 1937 |
| MS.gene37855.t1 | MTR_2g098030 | 31.320 | 1424 | 811 | 40 | 1 | 1346 | 1 | 1335 | 5.26e-174 | 555 |
| MS.gene37855.t1 | MTR_2g098030 | 31.378 | 1415 | 805 | 39 | 9 | 1346 | 14 | 1339 | 1.09e-173 | 554 |
| MS.gene37855.t1 | MTR_2g098030 | 30.879 | 1331 | 755 | 38 | 93 | 1346 | 3 | 1245 | 2.59e-164 | 527 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37855.t1 | AT2G27150 | 60.691 | 1361 | 497 | 10 | 14 | 1370 | 3 | 1329 | 0.0 | 1675 |
| MS.gene37855.t1 | AT2G27150 | 60.691 | 1361 | 497 | 10 | 14 | 1370 | 3 | 1329 | 0.0 | 1675 |
| MS.gene37855.t1 | AT3G43600 | 60.440 | 1365 | 482 | 15 | 13 | 1370 | 2 | 1315 | 0.0 | 1659 |
| MS.gene37855.t1 | AT1G04580 | 59.473 | 1367 | 505 | 13 | 14 | 1369 | 6 | 1334 | 0.0 | 1655 |
| MS.gene37855.t1 | AT5G20960 | 58.922 | 1373 | 529 | 16 | 8 | 1370 | 15 | 1362 | 0.0 | 1603 |
| MS.gene37855.t1 | AT5G20960 | 58.922 | 1373 | 529 | 16 | 8 | 1370 | 15 | 1362 | 0.0 | 1603 |
| MS.gene37855.t1 | AT2G27150 | 59.503 | 1247 | 467 | 10 | 128 | 1370 | 1 | 1213 | 0.0 | 1520 |
| MS.gene37855.t1 | AT2G27150 | 59.503 | 1247 | 467 | 10 | 128 | 1370 | 1 | 1213 | 0.0 | 1520 |
| MS.gene37855.t1 | AT2G27150 | 59.365 | 1196 | 448 | 10 | 14 | 1205 | 3 | 1164 | 0.0 | 1427 |
| MS.gene37855.t1 | AT2G27150 | 57.856 | 1082 | 418 | 10 | 128 | 1205 | 1 | 1048 | 0.0 | 1274 |
| MS.gene37855.t1 | AT4G34890 | 31.590 | 1415 | 799 | 38 | 12 | 1346 | 15 | 1340 | 2.02e-172 | 551 |
| MS.gene37855.t1 | AT4G34900 | 31.431 | 1419 | 806 | 39 | 7 | 1346 | 2 | 1332 | 7.71e-166 | 533 |
| MS.gene37855.t1 | AT4G34900 | 31.058 | 1333 | 753 | 38 | 93 | 1346 | 3 | 1248 | 1.58e-157 | 509 |
| MS.gene37855.t1 | AT4G34900 | 29.967 | 1208 | 702 | 33 | 7 | 1154 | 2 | 1125 | 3.78e-126 | 421 |
| MS.gene37855.t1 | AT1G02590 | 66.000 | 50 | 17 | 0 | 1189 | 1238 | 26 | 75 | 9.51e-18 | 80.1 |
Find 296 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGGGGTTGAACTCTTTC+TGG | 0.120155 | 5.3:-70236834 | MS.gene37855:CDS |
| GATAACATTGGAGGAATTTC+TGG | 0.152351 | 5.3:-70236212 | MS.gene37855:CDS |
| ATTGGAGCAAAGACAATATT+TGG | 0.188110 | 5.3:-70235170 | MS.gene37855:CDS |
| GGAATGTGTGTTTCACTCTT+TGG | 0.220249 | 5.3:-70237027 | MS.gene37855:CDS |
| GTCAACCAAAGGATCATATT+TGG | 0.226270 | 5.3:+70237215 | None:intergenic |
| GATATATCACCAACATGTTT+TGG | 0.235051 | 5.3:+70234846 | None:intergenic |
| CCGTGCCCATCTTCCATTTC+AGG | 0.256850 | 5.3:+70229691 | None:intergenic |
| CTCAACCCTGCTGTGGATTT+AGG | 0.264694 | 5.3:-70231813 | MS.gene37855:CDS |
| GAATATGAAACAGACCTTAA+TGG | 0.268609 | 5.3:-70231313 | MS.gene37855:CDS |
| GATCAATCAGGGATTGAAAT+TGG | 0.273893 | 5.3:-70236493 | MS.gene37855:CDS |
| AAAGGAGCTTCAGAACTTAT+TGG | 0.274555 | 5.3:-70236659 | MS.gene37855:CDS |
| TGCATTAGAGCTTGAGATAT+TGG | 0.276407 | 5.3:-70233392 | MS.gene37855:CDS |
| AAGCATTAAAATTCCAAGTT+TGG | 0.276510 | 5.3:-70236155 | MS.gene37855:CDS |
| AGCCCTGAATTGCGGCTAAA+TGG | 0.280420 | 5.3:-70235242 | MS.gene37855:CDS |
| AATTGTCAAGAGCCACCTTC+TGG | 0.285050 | 5.3:-70236979 | MS.gene37855:CDS |
| GCAATCTCTTCTGCAAATAA+AGG | 0.286751 | 5.3:+70235140 | None:intergenic |
| AGTACACTTTCCAAACTTAA+TGG | 0.287661 | 5.3:+70236181 | None:intergenic |
| AAAGCTCCATGTAAACAATT+TGG | 0.292478 | 5.3:+70235311 | None:intergenic |
| ATTACTCGAACATTACTTTC+AGG | 0.295763 | 5.3:+70234466 | None:intergenic |
| CCTGGCTCCATTGGCGTCAT+TGG | 0.298516 | 5.3:+70236624 | None:intergenic |
| TGATGTTGATATGGAGGATT+TGG | 0.299273 | 5.3:-70236851 | MS.gene37855:CDS |
| GGAAAGGCCACCATTAAGTT+TGG | 0.300063 | 5.3:-70236191 | MS.gene37855:CDS |
| GAATGTGTGTTTCACTCTTT+GGG | 0.305217 | 5.3:-70237026 | MS.gene37855:CDS |
| CCGATTCATGAAAGGTTTGC+AGG | 0.307070 | 5.3:-70237084 | MS.gene37855:CDS |
| ACTCCAACTTTATTGTCATC+TGG | 0.307981 | 5.3:-70235647 | MS.gene37855:CDS |
| TGCAACCATGCCTGTGGTTA+AGG | 0.311326 | 5.3:-70229745 | MS.gene37855:CDS |
| TTGAATTGGGTCAGGGTCTC+TGG | 0.314204 | 5.3:-70232862 | MS.gene37855:CDS |
| AGTATACCTTGCCTTCAATA+TGG | 0.315312 | 5.3:-70233072 | MS.gene37855:CDS |
| GTCTCAATACTATTTCTATA+TGG | 0.316640 | 5.3:-70234599 | MS.gene37855:CDS |
| GCACAGGCCCACCAGTTTAA+AGG | 0.321460 | 5.3:-70236677 | MS.gene37855:CDS |
| GGCCCTCATTGCAGATCTGC+TGG | 0.329584 | 5.3:+70233249 | None:intergenic |
| AATCCATTTAGCCGCAATTC+AGG | 0.330297 | 5.3:+70235239 | None:intergenic |
| ATTGGAAAGATGTTAAGTTT+TGG | 0.332835 | 5.3:-70235902 | MS.gene37855:CDS |
| GATGTTGATATGGAGGATTT+GGG | 0.337632 | 5.3:-70236850 | MS.gene37855:CDS |
| TCGATGATGTACCTCAATTA+TGG | 0.343681 | 5.3:-70232085 | MS.gene37855:CDS |
| AACATTGTAGGTTATCTTCA+TGG | 0.346832 | 5.3:+70233441 | None:intergenic |
| AATATCGGTTTGAAGAAATC+TGG | 0.347395 | 5.3:+70231857 | None:intergenic |
| TCAAGTATCATTACAAAGTC+GGG | 0.348027 | 5.3:+70236406 | None:intergenic |
| TCATTCTATGATCATTGTTA+TGG | 0.348730 | 5.3:-70233106 | MS.gene37855:CDS |
| CAAGGAAACAGCTTCTTTCA+TGG | 0.355336 | 5.3:-70229812 | MS.gene37855:CDS |
| AGCCAGTGTAGGTGGCAATT+TGG | 0.360862 | 5.3:-70236332 | MS.gene37855:CDS |
| CCTGTGCCAGCCGTGTTTCT+CGG | 0.362059 | 5.3:+70236693 | None:intergenic |
| TTTGTCGCTGCACTGGTTAT+CGG | 0.365984 | 5.3:-70236906 | MS.gene37855:CDS |
| AATTTCCAAATATGATCCTT+TGG | 0.373997 | 5.3:-70237220 | MS.gene37855:CDS |
| GAGGGCCCCTGGGGAAGTGC+AGG | 0.375620 | 5.3:-70233233 | MS.gene37855:CDS |
| AACAGCTTACCGTTCAAGTT+TGG | 0.375902 | 5.3:-70235816 | MS.gene37855:CDS |
| CATTACCTGCTTCAAGGACT+TGG | 0.377775 | 5.3:+70235621 | None:intergenic |
| TAGTCAGAAACTTGCAGATA+TGG | 0.378413 | 5.3:-70234982 | MS.gene37855:CDS |
| TACTTCAATAGCTTTAGATA+TGG | 0.382262 | 5.3:+70236459 | None:intergenic |
| AAAGTTGTTGTGAATAATAC+TGG | 0.383435 | 5.3:-70236598 | MS.gene37855:CDS |
| GGGTCTGTTGTTGTTGAAGT+TGG | 0.383716 | 5.3:-70232890 | MS.gene37855:CDS |
| GCAGCTCCCGATTTAATGAT+TGG | 0.384823 | 5.3:+70235578 | None:intergenic |
| AAGAAATGAGCTCTATCAAA+TGG | 0.387458 | 5.3:-70232616 | MS.gene37855:CDS |
| AACTTGATCCATACCCTTTG+AGG | 0.388510 | 5.3:+70231177 | None:intergenic |
| TGGAAAGCCAATCATTAAAT+CGG | 0.388993 | 5.3:-70235585 | MS.gene37855:CDS |
| AAGATCAGAAAGGATCAATC+AGG | 0.390812 | 5.3:-70236505 | MS.gene37855:CDS |
| GAGGCTGAAAAGGCTATTGC+AGG | 0.393419 | 5.3:-70236934 | MS.gene37855:CDS |
| AGAAATTATGTCGCCCTGTC+AGG | 0.393516 | 5.3:-70233513 | MS.gene37855:CDS |
| TTAACCACAGGCATGGTTGC+AGG | 0.394614 | 5.3:+70229747 | None:intergenic |
| GTTCTGAAGCTCCTTTAAAC+TGG | 0.394660 | 5.3:+70236666 | None:intergenic |
| AGGAAAGCAGCATTTAAGTA+TGG | 0.398894 | 5.3:+70236043 | None:intergenic |
| AACTGAAGCAAAGTAGTTGA+TGG | 0.398984 | 5.3:+70238845 | None:intergenic |
| TTAATGATTGGCTTTCCAAC+GGG | 0.404794 | 5.3:+70235590 | None:intergenic |
| CACATAAAAGTTGGTTTCTC+CGG | 0.405609 | 5.3:+70235745 | None:intergenic |
| TGACGCAACATTTCAGTTGC+GGG | 0.405630 | 5.3:-70229772 | MS.gene37855:CDS |
| AAGTTGCCTCTGGATTTATT+CGG | 0.408682 | 5.3:-70236360 | MS.gene37855:CDS |
| TCGAAAGACAGATATGATAA+TGG | 0.409902 | 5.3:-70233479 | MS.gene37855:CDS |
| GAAGTCTCTTGGACAAAGTA+AGG | 0.416398 | 5.3:-70232781 | MS.gene37855:CDS |
| CTGCCAACGATAAACCATTA+AGG | 0.419363 | 5.3:+70231299 | None:intergenic |
| TGGAGGAATTGAATTGGGTC+AGG | 0.423133 | 5.3:-70232870 | MS.gene37855:CDS |
| CAGAGGCAACTTTACTCATA+TGG | 0.429967 | 5.3:+70236371 | None:intergenic |
| AGATCTGCAATGAGGGCCCC+TGG | 0.430497 | 5.3:-70233244 | MS.gene37855:CDS |
| AGTCATGTTGTGAAGCAGTT+AGG | 0.431753 | 5.3:-70232694 | MS.gene37855:CDS |
| GAAATTTAACATTCTTGTGC+TGG | 0.433011 | 5.3:+70236758 | None:intergenic |
| TTTGAACATTAAACTGTTGA+GGG | 0.433694 | 5.3:+70231236 | None:intergenic |
| TAGGCTTAGCTGCGATATCT+TGG | 0.436173 | 5.3:-70232675 | MS.gene37855:CDS |
| TCAAGTAAAGACATTCCTAA+TGG | 0.437133 | 5.3:-70235203 | MS.gene37855:CDS |
| CTCCAACTTTATTGTCATCT+GGG | 0.439075 | 5.3:-70235646 | MS.gene37855:CDS |
| CGCTTCAAGAGTGTTAAACT+TGG | 0.439280 | 5.3:-70238806 | MS.gene37855:CDS |
| GATATTCATTACCTGCTTCA+AGG | 0.440792 | 5.3:+70235615 | None:intergenic |
| CTCCATTGGCGTCATTGGCA+TGG | 0.441000 | 5.3:+70236629 | None:intergenic |
| GTAATGCAATTGTCTTCGTC+TGG | 0.443011 | 5.3:+70234553 | None:intergenic |
| TACCGTTTCTGAGGCTGAAA+AGG | 0.443300 | 5.3:-70236944 | MS.gene37855:CDS |
| TTCATCTTTAGGTACAATAG+TGG | 0.443890 | 5.3:+70235847 | None:intergenic |
| TTATGAACAAAGAATTGAAA+TGG | 0.448199 | 5.3:-70233026 | MS.gene37855:CDS |
| TCACCACCAAATTGTTTACA+TGG | 0.448915 | 5.3:-70235317 | MS.gene37855:CDS |
| CGCAACTGAAATGTTGCGTC+AGG | 0.450090 | 5.3:+70229774 | None:intergenic |
| AGTGTACTAACCATGTTATG+TGG | 0.452725 | 5.3:+70233331 | None:intergenic |
| CATGTTGGTGATATATCAAA+AGG | 0.452940 | 5.3:-70234840 | MS.gene37855:CDS |
| AGTAGTTGATGGATCAACTT+TGG | 0.453240 | 5.3:+70238856 | None:intergenic |
| TGAAGTTGGAGGAATTGAAT+TGG | 0.453647 | 5.3:-70232876 | MS.gene37855:CDS |
| AATGCAAAATCCTTCACAAA+AGG | 0.455224 | 5.3:+70235704 | None:intergenic |
| ACTCATGTCTCACACTACTT+TGG | 0.457892 | 5.3:-70237170 | MS.gene37855:CDS |
| TTGTAGAAAGATACCTGAAA+TGG | 0.457968 | 5.3:-70229704 | MS.gene37855:CDS |
| CGATTTAGATACATCCTGAC+AGG | 0.458766 | 5.3:+70233499 | None:intergenic |
| TTCAAGTATCATTACAAAGT+CGG | 0.460899 | 5.3:+70236405 | None:intergenic |
| GCTTCTTTCATGGAGCAACT+TGG | 0.462636 | 5.3:-70229802 | MS.gene37855:CDS |
| AAGAGTGAAACACACATTCC+AGG | 0.462764 | 5.3:+70237030 | None:intergenic |
| AGTTTAACAGAATTAGTACT+TGG | 0.464285 | 5.3:-70232997 | MS.gene37855:CDS |
| AATGATCCCTGCACTTCCCC+AGG | 0.464710 | 5.3:+70233226 | None:intergenic |
| TGAAGATAACCTACAATGTT+GGG | 0.465491 | 5.3:-70233438 | MS.gene37855:CDS |
| TCCTTCAGCATTTCCTTGAG+AGG | 0.469037 | 5.3:+70232638 | None:intergenic |
| GAAGTTGGAGGAATTGAATT+GGG | 0.469203 | 5.3:-70232875 | MS.gene37855:CDS |
| TGATGGAACTGGAAGTCTCT+TGG | 0.469321 | 5.3:-70232792 | MS.gene37855:CDS |
| CCTGCAAACCTTTCATGAAT+CGG | 0.469701 | 5.3:+70237084 | None:intergenic |
| TGTGAAATTCAGGTGAAACT+TGG | 0.471229 | 5.3:-70234622 | MS.gene37855:intron |
| TACCGTTCAAGTTTGGCAGC+TGG | 0.475910 | 5.3:-70235809 | MS.gene37855:CDS |
| TTCTTTAATAGCTGCTCTTG+TGG | 0.476362 | 5.3:+70229836 | None:intergenic |
| TTGTTGGTTGCAGGTGGTTG+TGG | 0.477500 | 5.3:-70237258 | MS.gene37855:intron |
| GGTCCATGATAGATGCTTGT+AGG | 0.479012 | 5.3:-70235988 | MS.gene37855:CDS |
| ATTGTCAAGAGCCACCTTCT+GGG | 0.479149 | 5.3:-70236978 | MS.gene37855:CDS |
| ATGAAGATAACCTACAATGT+TGG | 0.479256 | 5.3:-70233439 | MS.gene37855:CDS |
| ATCCATTTAGCCGCAATTCA+GGG | 0.480081 | 5.3:+70235240 | None:intergenic |
| TGCAGGTGAGGCTGTATTTG+TGG | 0.480256 | 5.3:-70235351 | MS.gene37855:intron |
| CATCGTGTGCTTTCCTCAAA+GGG | 0.480446 | 5.3:-70231190 | MS.gene37855:intron |
| GCTAACTTACTCCATATTGA+AGG | 0.482396 | 5.3:+70233061 | None:intergenic |
| AAGATACCTGAAATGGAAGA+TGG | 0.482552 | 5.3:-70229697 | MS.gene37855:CDS |
| ACCTGTCCTAAATCCACAGC+AGG | 0.484206 | 5.3:+70231807 | None:intergenic |
| TTCCCAGATGACAATAAAGT+TGG | 0.484639 | 5.3:+70235644 | None:intergenic |
| GAGTAATTACAAGAAGGGTC+GGG | 0.484682 | 5.3:-70234450 | MS.gene37855:CDS |
| GATACCATCCTGCAGATTGA+AGG | 0.485211 | 5.3:-70231373 | MS.gene37855:intron |
| CGAGCTTCTCCTAGACTGCT+TGG | 0.485941 | 5.3:-70236076 | MS.gene37855:CDS |
| ACACTACTTTGGAGCATACA+TGG | 0.490044 | 5.3:-70237159 | MS.gene37855:CDS |
| TGTTGTGAATAATACTGGTA+TGG | 0.492861 | 5.3:-70236593 | MS.gene37855:CDS |
| AATGAGTAAACTCGGGGCAT+TGG | 0.495320 | 5.3:+70234515 | None:intergenic |
| GAAGGCAAGGTATACTCAAA+AGG | 0.497702 | 5.3:+70233079 | None:intergenic |
| CCGAGAAACACGGCTGGCAC+AGG | 0.498963 | 5.3:-70236693 | MS.gene37855:CDS |
| ACTACTTACTGTGGACTCAA+TGG | 0.498968 | 5.3:-70236266 | MS.gene37855:CDS |
| TCTGTTGTTGTTGAAGTTGG+AGG | 0.499663 | 5.3:-70232887 | MS.gene37855:CDS |
| TCCGCAATCATAGATAATAT+CGG | 0.499964 | 5.3:+70231842 | None:intergenic |
| CATATGAGTAAAGTTGCCTC+TGG | 0.500064 | 5.3:-70236370 | MS.gene37855:CDS |
| GCATCGTGTGCTTTCCTCAA+AGG | 0.500192 | 5.3:-70231191 | MS.gene37855:CDS |
| CGAGTAATTACAAGAAGGGT+CGG | 0.501180 | 5.3:-70234451 | MS.gene37855:CDS |
| AAATGCTGCTTTCCTTGTTG+AGG | 0.501446 | 5.3:-70236035 | MS.gene37855:CDS |
| ATATCCGTTCACATAAAAGT+TGG | 0.502679 | 5.3:+70235736 | None:intergenic |
| GGGAACCTTTGTCGCTGCAC+TGG | 0.502740 | 5.3:-70236913 | MS.gene37855:CDS |
| AGAGTCAGTTGATACACAAC+TGG | 0.504573 | 5.3:+70232950 | None:intergenic |
| GCCCTCATTGCAGATCTGCT+GGG | 0.506175 | 5.3:+70233250 | None:intergenic |
| TGAATGGCACACAATTTGAA+TGG | 0.507343 | 5.3:-70236234 | MS.gene37855:CDS |
| GATACAGTGAGCTTGATTCA+AGG | 0.507611 | 5.3:-70232746 | MS.gene37855:CDS |
| GCATGAAGAACCCCAATCCC+TGG | 0.509741 | 5.3:+70231341 | None:intergenic |
| CTGGACGAAGGTGAAACAAA+TGG | 0.510407 | 5.3:-70232843 | MS.gene37855:CDS |
| CAAATGGCTGCATTCGCCCT+TGG | 0.511901 | 5.3:-70232827 | MS.gene37855:CDS |
| CACCAAATTGCCACCTACAC+TGG | 0.513059 | 5.3:+70236330 | None:intergenic |
| AAGACAGATATGATAATGGC+TGG | 0.513909 | 5.3:-70233475 | MS.gene37855:CDS |
| GGAAAGCCAATCATTAAATC+GGG | 0.514302 | 5.3:-70235584 | MS.gene37855:CDS |
| ACATTGTAGGTTATCTTCAT+GGG | 0.514561 | 5.3:+70233442 | None:intergenic |
| TTGAGGAAAGCACACGATGC+TGG | 0.515289 | 5.3:+70231194 | None:intergenic |
| ATTTGAACATTAAACTGTTG+AGG | 0.518786 | 5.3:+70231235 | None:intergenic |
| GATCTGCAATGAGGGCCCCT+GGG | 0.520233 | 5.3:-70233243 | MS.gene37855:CDS |
| GTTAAACTTGGTTGTGGTGA+AGG | 0.520608 | 5.3:-70238794 | MS.gene37855:intron |
| ACAATTCAATGTGATGGAAC+TGG | 0.522411 | 5.3:-70232803 | MS.gene37855:CDS |
| TGTAAACAATTTGGTGGTGA+AGG | 0.522681 | 5.3:+70235320 | None:intergenic |
| TGAAGCTCCTTTAAACTGGT+GGG | 0.523102 | 5.3:+70236670 | None:intergenic |
| CCAATGACGCCAATGGAGCC+AGG | 0.524299 | 5.3:-70236624 | MS.gene37855:CDS |
| GTGAAATTCAGGTGAAACTT+GGG | 0.524542 | 5.3:-70234621 | MS.gene37855:intron |
| AGAAATGAGCTCTATCAAAT+GGG | 0.525671 | 5.3:-70232615 | MS.gene37855:CDS |
| GTGTCTCCAAGTGAAAATTC+TGG | 0.526023 | 5.3:-70236013 | MS.gene37855:CDS |
| CTGAAGCTCCTTTAAACTGG+TGG | 0.527833 | 5.3:+70236669 | None:intergenic |
| CTGACTCTACGACCAACGCC+TGG | 0.528138 | 5.3:-70232935 | MS.gene37855:CDS |
| CCCTGCTGTGGATTTAGGAC+AGG | 0.528247 | 5.3:-70231808 | MS.gene37855:intron |
| TCAATGGTTCATATAATGAA+TGG | 0.528482 | 5.3:-70236250 | MS.gene37855:CDS |
| AGAGTGAAACACACATTCCA+GGG | 0.528965 | 5.3:+70237031 | None:intergenic |
| TGCTGCTGATGTTGATATGG+AGG | 0.529902 | 5.3:-70236857 | MS.gene37855:CDS |
| GTAAAGACATTCCTAATGGT+GGG | 0.530238 | 5.3:-70235199 | MS.gene37855:CDS |
| TGATAAGTATATTGATCTGA+AGG | 0.530273 | 5.3:-70236545 | MS.gene37855:CDS |
| CGATTCATGAAAGGTTTGCA+GGG | 0.535623 | 5.3:-70237083 | MS.gene37855:CDS |
| AGGGCCCCTGGGGAAGTGCA+GGG | 0.536468 | 5.3:-70233232 | MS.gene37855:CDS |
| CTTGAGATATTGGTCAATGC+TGG | 0.536646 | 5.3:-70233382 | MS.gene37855:CDS |
| TCCCAGCAGATCTGCAATGA+GGG | 0.536774 | 5.3:-70233251 | MS.gene37855:CDS |
| CTGACGCAACATTTCAGTTG+CGG | 0.537827 | 5.3:-70229773 | MS.gene37855:CDS |
| ATTTGAATGGATAACATTGG+AGG | 0.537974 | 5.3:-70236221 | MS.gene37855:CDS |
| TACATCATCGAGTTATTGTC+GGG | 0.539664 | 5.3:+70232097 | None:intergenic |
| AGGGCATTTCCAAGCAGTCT+AGG | 0.540398 | 5.3:+70236067 | None:intergenic |
| CTCAAAAGTTACCGTTTCTG+AGG | 0.540572 | 5.3:-70236953 | MS.gene37855:CDS |
| AGTAATTACAAGAAGGGTCG+GGG | 0.541016 | 5.3:-70234449 | MS.gene37855:CDS |
| GGGTTTCATGCTTCTCAATG+TGG | 0.544526 | 5.3:-70237063 | MS.gene37855:CDS |
| GTACATCATCGAGTTATTGT+CGG | 0.545763 | 5.3:+70232096 | None:intergenic |
| TCTACTATAGCAAGATGCCT+TGG | 0.545821 | 5.3:-70234493 | MS.gene37855:CDS |
| CCTAATGGTGGGGAAAACAT+TGG | 0.549610 | 5.3:-70235188 | MS.gene37855:CDS |
| ACAATTTGAATGGATAACAT+TGG | 0.550782 | 5.3:-70236224 | MS.gene37855:CDS |
| GGAGCTGCGCTACAAGCTAC+AGG | 0.550843 | 5.3:-70235563 | MS.gene37855:intron |
| GCATCTTCAACAGATAGAAT+AGG | 0.551169 | 5.3:+70234912 | None:intergenic |
| TCCTTTGGTTGACAGAGTTG+AGG | 0.551997 | 5.3:-70237205 | MS.gene37855:CDS |
| GGGAACCAAGTCCTTGAAGC+AGG | 0.552073 | 5.3:-70235626 | MS.gene37855:CDS |
| TATCGTTGGCAGATGGCACA+TGG | 0.552385 | 5.3:-70231288 | MS.gene37855:CDS |
| TGTTCGAGTAATTACAAGAA+GGG | 0.552792 | 5.3:-70234455 | MS.gene37855:CDS |
| AGTAAAGACATTCCTAATGG+TGG | 0.554617 | 5.3:-70235200 | MS.gene37855:CDS |
| ACGGAGTCTCAACCCTGCTG+TGG | 0.554639 | 5.3:-70231820 | MS.gene37855:CDS |
| CAGCCTACAAGCATCTATCA+TGG | 0.555012 | 5.3:+70235985 | None:intergenic |
| GTGTACTAACCATGTTATGT+GGG | 0.556523 | 5.3:+70233332 | None:intergenic |
| AATGGTTTATCGTTGGCAGA+TGG | 0.556739 | 5.3:-70231295 | MS.gene37855:CDS |
| ATACAGTGAGCTTGATTCAA+GGG | 0.557138 | 5.3:-70232745 | MS.gene37855:CDS |
| AAGAGTGTTAAACTTGGTTG+TGG | 0.557403 | 5.3:-70238800 | MS.gene37855:CDS |
| TTTAATGATTGGCTTTCCAA+CGG | 0.558146 | 5.3:+70235589 | None:intergenic |
| CTTGGCACAATTCAATGTGA+TGG | 0.559176 | 5.3:-70232809 | MS.gene37855:CDS |
| AGACCTTAATGGTTTATCGT+TGG | 0.559775 | 5.3:-70231302 | MS.gene37855:CDS |
| ACTGAAGCTGCTAGAAGTAA+AGG | 0.559795 | 5.3:+70229867 | None:intergenic |
| GGCATTGGAAATAGCAAACA+AGG | 0.561122 | 5.3:-70237114 | MS.gene37855:CDS |
| GCTGCGATATCTTGGTTGAG+AGG | 0.563095 | 5.3:-70232667 | MS.gene37855:CDS |
| ATAACAACAAGTGAAGGCAT+TGG | 0.565209 | 5.3:-70237129 | MS.gene37855:CDS |
| GATTGCATCCGATTCATGAA+AGG | 0.565763 | 5.3:-70237092 | MS.gene37855:CDS |
| AAGCAGCATTTAAGTATGGA+AGG | 0.566041 | 5.3:+70236047 | None:intergenic |
| TGAGGGATAGTGTCTATCGT+AGG | 0.567492 | 5.3:+70231253 | None:intergenic |
| CCTCTAGTTGAAAATACTGC+CGG | 0.568030 | 5.3:-70235764 | MS.gene37855:CDS |
| CTGGAGAAAAGAAGAAAGCA+AGG | 0.568437 | 5.3:-70236815 | MS.gene37855:CDS |
| ATCACATTGAATTGTGCCAA+GGG | 0.569331 | 5.3:+70232811 | None:intergenic |
| AACCATGCCAATGACGCCAA+TGG | 0.571845 | 5.3:-70236631 | MS.gene37855:CDS |
| TCCTCAACTCTGTCAACCAA+AGG | 0.571934 | 5.3:+70237204 | None:intergenic |
| GAAGAGATTGCAAGATGTGT+CGG | 0.572072 | 5.3:-70235128 | MS.gene37855:CDS |
| CATCACATTGAATTGTGCCA+AGG | 0.572457 | 5.3:+70232810 | None:intergenic |
| GCCTCTCAAGGAAATGCTGA+AGG | 0.574410 | 5.3:-70232639 | MS.gene37855:CDS |
| GCTCCATGTAAACAATTTGG+TGG | 0.574472 | 5.3:+70235314 | None:intergenic |
| CATTGGAGGAATTTCTGGAA+AGG | 0.575220 | 5.3:-70236207 | MS.gene37855:CDS |
| TTACTGCAGCACCATAATTG+AGG | 0.576290 | 5.3:+70232074 | None:intergenic |
| CTTACTCCATATTGAAGGCA+AGG | 0.576357 | 5.3:+70233066 | None:intergenic |
| TGCAGCAATCCCACATAACA+TGG | 0.579116 | 5.3:-70233341 | MS.gene37855:CDS |
| TTTCTCTACCCAAAACATGT+TGG | 0.581161 | 5.3:-70234855 | MS.gene37855:CDS |
| TATAGTAGAATGAGTAAACT+CGG | 0.581864 | 5.3:+70234507 | None:intergenic |
| ATACTCCTTATCCTTGCCAG+TGG | 0.582025 | 5.3:+70235272 | None:intergenic |
| GAGGGATAGTGTCTATCGTA+GGG | 0.582399 | 5.3:+70231254 | None:intergenic |
| AGATACCTGAAATGGAAGAT+GGG | 0.584167 | 5.3:-70229696 | MS.gene37855:CDS |
| CCACTGAGTTCCTTAACCAC+AGG | 0.587109 | 5.3:+70229735 | None:intergenic |
| ATGTTGATATGGAGGATTTG+GGG | 0.587628 | 5.3:-70236849 | MS.gene37855:CDS |
| CGGAATACAGCCAGTGTAGG+TGG | 0.588893 | 5.3:-70236340 | MS.gene37855:CDS |
| GGTAATGAATATCACCCCGT+TGG | 0.591385 | 5.3:-70235605 | MS.gene37855:CDS |
| ATGATCCCTGCACTTCCCCA+GGG | 0.591389 | 5.3:+70233227 | None:intergenic |
| GATAACCAGTGCAGCGACAA+AGG | 0.591470 | 5.3:+70236908 | None:intergenic |
| TGAGCTCTCAAAGATCAGAA+AGG | 0.591501 | 5.3:-70236515 | MS.gene37855:CDS |
| ATAGTAGAATGAGTAAACTC+GGG | 0.592598 | 5.3:+70234508 | None:intergenic |
| GTGGAAATAGATCTACTGAC+AGG | 0.592865 | 5.3:-70231885 | MS.gene37855:CDS |
| AATGTTCAAATTCTCAACAG+TGG | 0.594277 | 5.3:-70231223 | MS.gene37855:CDS |
| GGTTAAGGAACTCAGTGGAC+TGG | 0.594338 | 5.3:-70229730 | MS.gene37855:CDS |
| ATCTGCAATGAGGGCCCCTG+GGG | 0.594670 | 5.3:-70233242 | MS.gene37855:CDS |
| CACTTGGAGACACCTCAACA+AGG | 0.596764 | 5.3:+70236023 | None:intergenic |
| TAAAGACATTCCTAATGGTG+GGG | 0.600005 | 5.3:-70235198 | MS.gene37855:CDS |
| TCTCCAAGTGAAAATTCTGG+TGG | 0.600746 | 5.3:-70236010 | MS.gene37855:CDS |
| TGAGAGGTTAAAGCCTCTCA+AGG | 0.602913 | 5.3:-70232651 | MS.gene37855:CDS |
| TTCAATATCGTAATCGACAA+CGG | 0.605573 | 5.3:+70234947 | None:intergenic |
| ATATGATAATGGCTGGAGGA+AGG | 0.605624 | 5.3:-70233468 | MS.gene37855:CDS |
| GAGCAGCTATTAAAGAAGCA+AGG | 0.606084 | 5.3:-70229830 | MS.gene37855:CDS |
| TTCATATCCTCCGAGAAACA+CGG | 0.608134 | 5.3:-70236703 | MS.gene37855:CDS |
| GTTGTGAATAATACTGGTAT+GGG | 0.608344 | 5.3:-70236592 | MS.gene37855:CDS |
| GGAGGAATTGAATTGGGTCA+GGG | 0.609458 | 5.3:-70232869 | MS.gene37855:CDS |
| AGATCAGAAAGGATCAATCA+GGG | 0.609735 | 5.3:-70236504 | MS.gene37855:CDS |
| GGTCAATGCTGGTATATATG+TGG | 0.612012 | 5.3:-70233371 | MS.gene37855:CDS |
| ATTCGGAATACAGCCAGTGT+AGG | 0.612101 | 5.3:-70236343 | MS.gene37855:CDS |
| TGTTCAATAACAACAAGTGA+AGG | 0.612214 | 5.3:-70237135 | MS.gene37855:CDS |
| TACAGTGAGCTTGATTCAAG+GGG | 0.613500 | 5.3:-70232744 | MS.gene37855:CDS |
| GAGTTCCTTAACCACAGGCA+TGG | 0.614569 | 5.3:+70229740 | None:intergenic |
| AGCCAGCTGCCAAACTTGAA+CGG | 0.616315 | 5.3:+70235807 | None:intergenic |
| ATGTTCGAGTAATTACAAGA+AGG | 0.616344 | 5.3:-70234456 | MS.gene37855:CDS |
| CAAGCAGTCTAGGAGAAGCT+CGG | 0.616375 | 5.3:+70236077 | None:intergenic |
| ACCGATATTATCTATGATTG+CGG | 0.616662 | 5.3:-70231843 | MS.gene37855:CDS |
| TGTTACAATACTACTTACTG+TGG | 0.617166 | 5.3:-70236275 | MS.gene37855:CDS |
| ATCCCAGCAGATCTGCAATG+AGG | 0.619233 | 5.3:-70233252 | MS.gene37855:CDS |
| GATAAGTATATTGATCTGAA+GGG | 0.620052 | 5.3:-70236544 | MS.gene37855:CDS |
| CAAGTATCATTACAAAGTCG+GGG | 0.621029 | 5.3:+70236407 | None:intergenic |
| ACAAAAGAACAAGTTTCCCT+CGG | 0.622304 | 5.3:-70236302 | MS.gene37855:CDS |
| AAGTCTCTTGGACAAAGTAA+GGG | 0.622503 | 5.3:-70232780 | MS.gene37855:CDS |
| TAGTATTGTAACAATATCCG+AGG | 0.623581 | 5.3:+70236285 | None:intergenic |
| TAAAACTCAGCCCTGAATTG+CGG | 0.624714 | 5.3:-70235250 | MS.gene37855:CDS |
| AGCAGCATTTAAGTATGGAA+GGG | 0.632691 | 5.3:+70236048 | None:intergenic |
| TGGTGATATATCAAAAGGAA+TGG | 0.635108 | 5.3:-70234835 | MS.gene37855:CDS |
| CTCCAAGTGAAAATTCTGGT+GGG | 0.636276 | 5.3:-70236009 | MS.gene37855:CDS |
| TTGTGCTGGTGCTCATATCG+AGG | 0.637322 | 5.3:+70236772 | None:intergenic |
| TTATGGTGCTGCAGTAAGTG+AGG | 0.638457 | 5.3:-70232068 | MS.gene37855:intron |
| AGGCTGAAAAGGCTATTGCA+GGG | 0.638825 | 5.3:-70236933 | MS.gene37855:CDS |
| TGTAGGTGGCAATTTGGTGA+TGG | 0.639172 | 5.3:-70236326 | MS.gene37855:CDS |
| TCTTCAACAGATAGAATAGG+TGG | 0.642877 | 5.3:+70234915 | None:intergenic |
| GTAATTACAAGAAGGGTCGG+GGG | 0.643064 | 5.3:-70234448 | MS.gene37855:CDS |
| TATCCTCCGAGAAACACGGC+TGG | 0.645513 | 5.3:-70236699 | MS.gene37855:CDS |
| ACACTTTCCAAACTTAATGG+TGG | 0.647934 | 5.3:+70236184 | None:intergenic |
| GGTTCCTGCAACCATGCCTG+TGG | 0.649210 | 5.3:-70229751 | MS.gene37855:CDS |
| GAAGCTGCTAGAAGTAAAGG+CGG | 0.651777 | 5.3:+70229870 | None:intergenic |
| AAGCTCGGTAAGTTTCAAAG+TGG | 0.657473 | 5.3:+70236092 | None:intergenic |
| GGGTCAGGGTCTCTGGACGA+AGG | 0.659286 | 5.3:-70232855 | MS.gene37855:CDS |
| GATTTAGATACATCCTGACA+GGG | 0.659769 | 5.3:+70233500 | None:intergenic |
| TCACAAGATTCTATCTGCTG+AGG | 0.661889 | 5.3:-70234802 | MS.gene37855:intron |
| TAATGATTGGCTTTCCAACG+GGG | 0.662171 | 5.3:+70235591 | None:intergenic |
| AGTATTGTAACAATATCCGA+GGG | 0.668326 | 5.3:+70236286 | None:intergenic |
| CCTGAAATGGAAGATGGGCA+CGG | 0.670506 | 5.3:-70229691 | MS.gene37855:CDS |
| CATTACTTTCAGGAATACCA+AGG | 0.671155 | 5.3:+70234476 | None:intergenic |
| GGATATTATAAAGATAACGA+TGG | 0.673451 | 5.3:-70236571 | MS.gene37855:CDS |
| ATATTATCTATGATTGCGGA+CGG | 0.674443 | 5.3:-70231839 | MS.gene37855:CDS |
| CAGTGAGCTTGATTCAAGGG+GGG | 0.676154 | 5.3:-70232742 | MS.gene37855:CDS |
| ACAGATATGATAATGGCTGG+AGG | 0.683979 | 5.3:-70233472 | MS.gene37855:CDS |
| GTGCCAGCCGTGTTTCTCGG+AGG | 0.685945 | 5.3:+70236696 | None:intergenic |
| TAGTAGAATGAGTAAACTCG+GGG | 0.696695 | 5.3:+70234509 | None:intergenic |
| TTCACAACATGACTCTGATG+TGG | 0.702123 | 5.3:+70232703 | None:intergenic |
| ACAGTGAGCTTGATTCAAGG+GGG | 0.707458 | 5.3:-70232743 | MS.gene37855:CDS |
| CCTGTCCTAAATCCACAGCA+GGG | 0.710740 | 5.3:+70231808 | None:intergenic |
| TGTATTCCGAATAAATCCAG+AGG | 0.711856 | 5.3:+70236354 | None:intergenic |
| TGATCCCTGCACTTCCCCAG+GGG | 0.722809 | 5.3:+70233228 | None:intergenic |
| GAGTGAAACACACATTCCAG+GGG | 0.739085 | 5.3:+70237032 | None:intergenic |
| CCTGTGGTTAAGGAACTCAG+TGG | 0.744837 | 5.3:-70229735 | MS.gene37855:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 70229686 | 70238954 | 70229686 | ID=MS.gene37855 |
| chr5.3 | mRNA | 70229686 | 70238954 | 70229686 | ID=MS.gene37855.t1;Parent=MS.gene37855 |
| chr5.3 | exon | 70238795 | 70238954 | 70238795 | ID=MS.gene37855.t1.exon1;Parent=MS.gene37855.t1 |
| chr5.3 | CDS | 70238795 | 70238954 | 70238795 | ID=cds.MS.gene37855.t1;Parent=MS.gene37855.t1 |
| chr5.3 | exon | 70235564 | 70237267 | 70235564 | ID=MS.gene37855.t1.exon2;Parent=MS.gene37855.t1 |
| chr5.3 | CDS | 70235564 | 70237267 | 70235564 | ID=cds.MS.gene37855.t1;Parent=MS.gene37855.t1 |
| chr5.3 | exon | 70235109 | 70235368 | 70235109 | ID=MS.gene37855.t1.exon3;Parent=MS.gene37855.t1 |
| chr5.3 | CDS | 70235109 | 70235368 | 70235109 | ID=cds.MS.gene37855.t1;Parent=MS.gene37855.t1 |
| chr5.3 | exon | 70234803 | 70235012 | 70234803 | ID=MS.gene37855.t1.exon4;Parent=MS.gene37855.t1 |
| chr5.3 | CDS | 70234803 | 70235012 | 70234803 | ID=cds.MS.gene37855.t1;Parent=MS.gene37855.t1 |
| chr5.3 | exon | 70234414 | 70234632 | 70234414 | ID=MS.gene37855.t1.exon5;Parent=MS.gene37855.t1 |
| chr5.3 | CDS | 70234414 | 70234632 | 70234414 | ID=cds.MS.gene37855.t1;Parent=MS.gene37855.t1 |
| chr5.3 | exon | 70232598 | 70233563 | 70232598 | ID=MS.gene37855.t1.exon6;Parent=MS.gene37855.t1 |
| chr5.3 | CDS | 70232598 | 70233563 | 70232598 | ID=cds.MS.gene37855.t1;Parent=MS.gene37855.t1 |
| chr5.3 | exon | 70232069 | 70232164 | 70232069 | ID=MS.gene37855.t1.exon7;Parent=MS.gene37855.t1 |
| chr5.3 | CDS | 70232069 | 70232164 | 70232069 | ID=cds.MS.gene37855.t1;Parent=MS.gene37855.t1 |
| chr5.3 | exon | 70231809 | 70231907 | 70231809 | ID=MS.gene37855.t1.exon8;Parent=MS.gene37855.t1 |
| chr5.3 | CDS | 70231809 | 70231907 | 70231809 | ID=cds.MS.gene37855.t1;Parent=MS.gene37855.t1 |
| chr5.3 | exon | 70231191 | 70231380 | 70231191 | ID=MS.gene37855.t1.exon9;Parent=MS.gene37855.t1 |
| chr5.3 | CDS | 70231191 | 70231380 | 70231191 | ID=cds.MS.gene37855.t1;Parent=MS.gene37855.t1 |
| chr5.3 | exon | 70229686 | 70229903 | 70229686 | ID=MS.gene37855.t1.exon10;Parent=MS.gene37855.t1 |
| chr5.3 | CDS | 70229686 | 70229903 | 70229686 | ID=cds.MS.gene37855.t1;Parent=MS.gene37855.t1 |
| Gene Sequence |
| Protein sequence |