Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37949.t1 | XP_024639469.1 | 77 | 535 | 53 | 2 | 401 | 935 | 415 | 879 | 4.70E-88 | 336.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37949.t1 | A0A396HZU8 | 84.2 | 538 | 81 | 2 | 401 | 935 | 415 | 951 | 7.6e-88 | 335.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056543 | MS.gene37949 | 0.8004 | 1.47E-48 | -1.69E-46 |
| MS.gene059154 | MS.gene37949 | 0.801269 | 9.75E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37949.t1 | MTR_5g095720 | 78.168 | 655 | 80 | 8 | 1 | 614 | 48 | 680 | 0.0 | 865 |
| MS.gene37949.t1 | MTR_5g095720 | 78.893 | 289 | 32 | 2 | 692 | 951 | 584 | 872 | 1.04e-108 | 357 |
| MS.gene37949.t1 | MTR_5g095720 | 64.634 | 82 | 24 | 3 | 607 | 683 | 596 | 677 | 3.28e-11 | 67.8 |
| MS.gene37949.t1 | MTR_3g058970 | 58.633 | 278 | 93 | 7 | 382 | 640 | 370 | 644 | 1.61e-82 | 284 |
| MS.gene37949.t1 | MTR_3g058970 | 54.826 | 259 | 105 | 6 | 688 | 936 | 528 | 784 | 2.21e-48 | 185 |
| MS.gene37949.t1 | MTR_3g098990 | 41.234 | 308 | 147 | 9 | 383 | 663 | 91 | 391 | 1.51e-53 | 196 |
| MS.gene37949.t1 | MTR_3g098990 | 34.884 | 258 | 139 | 10 | 682 | 928 | 249 | 488 | 1.46e-12 | 71.6 |
| MS.gene37949.t1 | MTR_5g096450 | 43.716 | 183 | 66 | 6 | 364 | 528 | 47 | 210 | 2.68e-30 | 119 |
| MS.gene37949.t1 | MTR_5g096597 | 47.500 | 120 | 26 | 2 | 251 | 366 | 1 | 87 | 3.20e-14 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37949.t1 | AT5G55660 | 55.615 | 187 | 78 | 3 | 364 | 545 | 301 | 487 | 5.13e-56 | 208 |
| MS.gene37949.t1 | AT5G55660 | 41.361 | 191 | 105 | 3 | 750 | 935 | 554 | 742 | 4.16e-24 | 109 |
| MS.gene37949.t1 | AT4G26630 | 57.297 | 185 | 72 | 3 | 379 | 556 | 307 | 491 | 1.08e-52 | 198 |
| MS.gene37949.t1 | AT4G26630 | 44.792 | 192 | 93 | 4 | 750 | 936 | 551 | 734 | 4.48e-24 | 109 |
| MS.gene37949.t1 | AT4G26630 | 57.297 | 185 | 72 | 3 | 379 | 556 | 307 | 491 | 1.08e-52 | 198 |
| MS.gene37949.t1 | AT4G26630 | 44.792 | 192 | 93 | 4 | 750 | 936 | 551 | 734 | 4.48e-24 | 109 |
| MS.gene37949.t1 | AT5G63550 | 41.924 | 291 | 131 | 8 | 384 | 640 | 94 | 380 | 3.08e-50 | 186 |
| MS.gene37949.t1 | AT5G63550 | 42.268 | 291 | 129 | 9 | 384 | 640 | 94 | 379 | 5.59e-49 | 182 |
| MS.gene37949.t1 | AT3G48710 | 33.493 | 418 | 211 | 14 | 383 | 741 | 53 | 462 | 2.60e-39 | 152 |
| MS.gene37949.t1 | AT1G64253 | 52.381 | 63 | 30 | 0 | 871 | 933 | 122 | 184 | 5.16e-13 | 68.9 |
| MS.gene37949.t1 | AT1G64253 | 52.381 | 63 | 30 | 0 | 871 | 933 | 254 | 316 | 2.97e-11 | 66.2 |
| MS.gene37949.t1 | AT1G64253 | 52.381 | 63 | 30 | 0 | 871 | 933 | 330 | 392 | 4.77e-11 | 66.2 |
Find 177 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCGAAGCTAATAGACTTTC+TGG | 0.127423 | 5.1:+76470068 | MS.gene37949:CDS |
| CTCTTCAATTTGAAATTCTT+TGG | 0.180004 | 5.1:-76468700 | None:intergenic |
| ATGCTCTCATCTTTGGCTTC+AGG | 0.206211 | 5.1:-76468435 | None:intergenic |
| ACTTGAGAAAGTATTGAAAA+AGG | 0.225143 | 5.1:+76468536 | MS.gene37949:CDS |
| TGCAACGGATTCTTTCTTTC+TGG | 0.237255 | 5.1:-76471627 | None:intergenic |
| GTATCTACCTGCTTTGTCTT+TGG | 0.259843 | 5.1:-76471843 | None:intergenic |
| GTCTTTACAGATGCCTTTCT+TGG | 0.280038 | 5.1:-76473002 | None:intergenic |
| TGCCCTCATCTTTGCTTTCA+AGG | 0.287502 | 5.1:-76468239 | None:intergenic |
| TAGCATGTTAATGTCAGTTT+TGG | 0.296740 | 5.1:-76467503 | None:intergenic |
| AGGATAAGAAAGTTAATATT+GGG | 0.305761 | 5.1:+76468073 | MS.gene37949:CDS |
| TGATAAAGGGGAAGAATTAA+AGG | 0.309808 | 5.1:+76468050 | MS.gene37949:CDS |
| GAGGATAAGAAAGTTAATAT+TGG | 0.311525 | 5.1:+76468072 | MS.gene37949:CDS |
| TCATCCATGGCATCTAATTC+AGG | 0.319577 | 5.1:-76468207 | None:intergenic |
| GAGGAGAAGAAAGCTGATAA+AGG | 0.329787 | 5.1:+76468000 | MS.gene37949:CDS |
| GAGGAGAAGAAAGCTGATAA+AGG | 0.329787 | 5.1:+76468036 | MS.gene37949:CDS |
| GATAAGAAAGATGATGATAA+TGG | 0.331137 | 5.1:+76468111 | MS.gene37949:CDS |
| TCTTTACAGATGCCTTTCTT+GGG | 0.349273 | 5.1:-76473001 | None:intergenic |
| TGCTCTCATCTTTGGCTTCA+GGG | 0.352203 | 5.1:-76468434 | None:intergenic |
| GTGGGTCGACAATGGTTTCT+TGG | 0.359192 | 5.1:-76471711 | None:intergenic |
| TGGCATTTAAATTATCTAGA+AGG | 0.368252 | 5.1:+76469000 | MS.gene37949:CDS |
| CTTGTATTTGCATTCCCAAC+TGG | 0.374686 | 5.1:-76469563 | None:intergenic |
| AGGAGAAGAAAGCTGATAAA+GGG | 0.375612 | 5.1:+76468001 | MS.gene37949:CDS |
| AGGAGAAGAAAGCTGATAAA+GGG | 0.375612 | 5.1:+76468037 | MS.gene37949:CDS |
| TTTGTTCTTGATCTTTCTTT+CGG | 0.380948 | 5.1:-76472409 | None:intergenic |
| TTCTTCCTTGAAAAGACCTT+GGG | 0.390073 | 5.1:-76471767 | None:intergenic |
| ACAGAAAACAATAACAAAAC+CGG | 0.394251 | 5.1:+76467709 | MS.gene37949:CDS |
| CGGTTGGTTGTAGGAGTTGT+TGG | 0.399867 | 5.1:-76468618 | None:intergenic |
| CGTACAGGACGGTTGGTTGT+AGG | 0.414924 | 5.1:-76468627 | None:intergenic |
| AGGATAAGAAAGTTGATGTT+AGG | 0.418299 | 5.1:+76467860 | MS.gene37949:CDS |
| AGCGGGAAAGGAAAGGTTGA+TGG | 0.418499 | 5.1:+76468363 | MS.gene37949:CDS |
| AGGATAAGAAAGACGATGTA+GGG | 0.420916 | 5.1:+76467824 | MS.gene37949:CDS |
| TCCTACAAAAGAGGATTGTA+TGG | 0.423332 | 5.1:-76469049 | None:intergenic |
| ATAGCAAAACAAGGCTCAAC+AGG | 0.431493 | 5.1:+76470286 | MS.gene37949:CDS |
| TGACAAATCTGAAGATGAAA+AGG | 0.431708 | 5.1:+76470580 | MS.gene37949:CDS |
| CTTCTTCCTTGAAAAGACCT+TGG | 0.434088 | 5.1:-76471768 | None:intergenic |
| CAGAGAGGATGATAAGGATA+AGG | 0.435697 | 5.1:+76468287 | MS.gene37949:CDS |
| TGGGTCGACAATGGTTTCTT+GGG | 0.436115 | 5.1:-76471710 | None:intergenic |
| TGGGGAGGAAGAACTAGAAA+TGG | 0.438759 | 5.1:+76467657 | MS.gene37949:CDS |
| TCTACCTGCTTTGTCTTTGG+AGG | 0.441817 | 5.1:-76471840 | None:intergenic |
| AACAATAACAAAACCGGGGA+TGG | 0.443425 | 5.1:+76467715 | MS.gene37949:CDS |
| ATAAGAAAGATGATGATAAT+GGG | 0.443554 | 5.1:+76468112 | MS.gene37949:CDS |
| AAACAAGGCTCAACAGGATC+TGG | 0.448149 | 5.1:+76470292 | MS.gene37949:CDS |
| TTTGTCTTTGGAGGAAGACT+TGG | 0.451286 | 5.1:-76471831 | None:intergenic |
| CCTTTCCTCTCCTACAAAAG+AGG | 0.454663 | 5.1:-76469058 | None:intergenic |
| AAGAGAACGAAGAGAACGAC+AGG | 0.458455 | 5.1:+76473070 | MS.gene37949:CDS |
| AAAACCACGCTCGGCACGAA+AGG | 0.466168 | 5.1:+76471682 | MS.gene37949:CDS |
| ATCACTTGCAGAACAAGAAA+AGG | 0.466254 | 5.1:+76470116 | MS.gene37949:CDS |
| AAACAAGGTTCATCAAGATC+TGG | 0.467180 | 5.1:+76470758 | MS.gene37949:CDS |
| AAACAAAGTTCATCGAGATC+TGG | 0.467180 | 5.1:+76471234 | MS.gene37949:CDS |
| GAGGATGAGAAAGTTGTTGA+AGG | 0.467739 | 5.1:+76467751 | MS.gene37949:CDS |
| AGATGAGGAGGTGGGCGATA+AGG | 0.469853 | 5.1:+76468476 | MS.gene37949:CDS |
| ATGAGAAGAAAGTGAGTGAA+AGG | 0.469883 | 5.1:+76471591 | MS.gene37949:CDS |
| TCTTTCACTTTGCAGGGTCG+TGG | 0.471388 | 5.1:+76468792 | MS.gene37949:intron |
| GGAGGTGGGCGATAAGGATA+AGG | 0.471989 | 5.1:+76468482 | MS.gene37949:CDS |
| AGAAGACAGAGAGGATGATA+AGG | 0.474281 | 5.1:+76468281 | MS.gene37949:CDS |
| TCCCCACTTTCAGATTTCTC+CGG | 0.474376 | 5.1:-76471551 | None:intergenic |
| GCGGGAAAGGAAAGGTTGAT+GGG | 0.476391 | 5.1:+76468364 | MS.gene37949:CDS |
| ACTGATTTCCTTTCACGTAC+AGG | 0.487334 | 5.1:-76468642 | None:intergenic |
| ATGTAACAAAGAGAAGTTGC+TGG | 0.487637 | 5.1:+76469517 | MS.gene37949:CDS |
| ATCTGCTTGACGTACCAGTT+GGG | 0.489298 | 5.1:+76469549 | MS.gene37949:CDS |
| AAAACTGACATTAACATGCT+AGG | 0.489488 | 5.1:+76467505 | MS.gene37949:CDS |
| CAAAGATGAGAGCATTGAAA+AGG | 0.490075 | 5.1:+76468443 | MS.gene37949:CDS |
| GAGGACAAGCATGCTGATGA+AGG | 0.491058 | 5.1:+76467787 | MS.gene37949:CDS |
| AAACCACGCTCGGCACGAAA+GGG | 0.493787 | 5.1:+76471683 | MS.gene37949:CDS |
| GAGGATAAGAAAGTCAATGA+AGG | 0.495054 | 5.1:+76467895 | MS.gene37949:CDS |
| GAAATTGATAAGAAAGCTGA+TGG | 0.495376 | 5.1:+76467637 | MS.gene37949:CDS |
| CAAAGATGAGGGCAGTGAAA+AGG | 0.496877 | 5.1:+76468248 | MS.gene37949:CDS |
| GAAAAGTCGAGATGAGGAGG+TGG | 0.497804 | 5.1:+76468467 | MS.gene37949:CDS |
| GAGGATAAGAAAGACGATGT+AGG | 0.498637 | 5.1:+76467823 | MS.gene37949:CDS |
| AAAGAGGGGAAAGCTGATGA+AGG | 0.500405 | 5.1:+76467928 | MS.gene37949:CDS |
| ACCCACTCTGCATCCGATCA+TGG | 0.507333 | 5.1:+76471728 | MS.gene37949:CDS |
| CGTGGATCTCACCCCAAGAA+AGG | 0.508523 | 5.1:+76472989 | MS.gene37949:CDS |
| AAACTGACATTAACATGCTA+GGG | 0.509499 | 5.1:+76467506 | MS.gene37949:CDS |
| CAATAACAAAACCGGGGATG+GGG | 0.511346 | 5.1:+76467717 | MS.gene37949:CDS |
| ACAATAACAAAACCGGGGAT+GGG | 0.512246 | 5.1:+76467716 | MS.gene37949:CDS |
| GAGGATAAGAAAGACGATGC+AGG | 0.513407 | 5.1:+76467964 | MS.gene37949:CDS |
| TCCGTAGCAGAGGAGAGAAA+AGG | 0.513706 | 5.1:+76471428 | MS.gene37949:CDS |
| GAAGCCTGAATTAGATGCCA+TGG | 0.514285 | 5.1:+76468203 | MS.gene37949:CDS |
| AAAGAAGGACCCGGAACCTA+AGG | 0.514727 | 5.1:+76467552 | MS.gene37949:CDS |
| GGAGAAGAAAGCTGATAAAG+GGG | 0.515860 | 5.1:+76468002 | MS.gene37949:CDS |
| GGAGAAGAAAGCTGATAAAG+GGG | 0.515860 | 5.1:+76468038 | MS.gene37949:CDS |
| GGAGAAAAGTCGAGATGAGG+AGG | 0.517122 | 5.1:+76468464 | MS.gene37949:CDS |
| AAAGGGTGGGAGAGGAAATG+TGG | 0.517698 | 5.1:+76468554 | MS.gene37949:CDS |
| GACTATTATTCAGCAAGAGC+TGG | 0.518089 | 5.1:+76473022 | MS.gene37949:CDS |
| TATTGGGGATGAAATTAAAG+AGG | 0.520170 | 5.1:+76468089 | MS.gene37949:CDS |
| GAAGGAACTGAAGAAGATAG+AGG | 0.526671 | 5.1:+76468407 | MS.gene37949:CDS |
| CTTTACAGATGCCTTTCTTG+GGG | 0.527928 | 5.1:-76473000 | None:intergenic |
| TAAAGGGGAAGAATTAAAAG+AGG | 0.528111 | 5.1:+76468017 | MS.gene37949:CDS |
| TTGCGTAACTGATCATCACT+CGG | 0.528843 | 5.1:-76472444 | None:intergenic |
| TGAGTCTGAGGAAGAACAGA+AGG | 0.530398 | 5.1:+76471469 | MS.gene37949:CDS |
| TGGGAGAGGAAATGTGGAGA+AGG | 0.533504 | 5.1:+76468560 | MS.gene37949:CDS |
| CAAAGAATTTCAAATTGAAG+AGG | 0.534513 | 5.1:+76468701 | MS.gene37949:CDS |
| TTTAGCTTTACTTTGTGCAA+CGG | 0.534541 | 5.1:-76471642 | None:intergenic |
| CAGAAAACAATAACAAAACC+GGG | 0.534823 | 5.1:+76467710 | MS.gene37949:CDS |
| AGGATAAGAAAGTCAATGAA+GGG | 0.536311 | 5.1:+76467896 | MS.gene37949:CDS |
| TGTTAGGCAAGAGGTAAAAG+AGG | 0.536428 | 5.1:+76467876 | MS.gene37949:CDS |
| CAAATCCAAGGATGAAAAGC+CGG | 0.539070 | 5.1:+76471532 | MS.gene37949:CDS |
| AGAAGACTCGAGTGAAAAGA+AGG | 0.540152 | 5.1:+76467537 | MS.gene37949:CDS |
| AACAAAACCGGGGATGGGGA+AGG | 0.541916 | 5.1:+76467721 | MS.gene37949:CDS |
| AAGGATACTCTCTTCATCCA+TGG | 0.543834 | 5.1:-76468220 | None:intergenic |
| TGAAGGAGAAGAACTAAAAG+AGG | 0.545142 | 5.1:+76467804 | MS.gene37949:CDS |
| ATTTAAATTATCTAGAAGGA+AGG | 0.545571 | 5.1:+76469004 | MS.gene37949:CDS |
| GTCAAAGATTTGAAAGAGGA+TGG | 0.546722 | 5.1:+76467601 | MS.gene37949:CDS |
| CCTTTCACGTACAGGACGGT+TGG | 0.549359 | 5.1:-76468634 | None:intergenic |
| TGTAGGGGAAGAAAGAAAAG+AGG | 0.551335 | 5.1:+76467840 | MS.gene37949:CDS |
| GAAAGTTGATGTTAGGCAAG+AGG | 0.551951 | 5.1:+76467867 | MS.gene37949:CDS |
| TGCTGTCAAAGATTTGAAAG+AGG | 0.553144 | 5.1:+76467597 | MS.gene37949:CDS |
| GATCTGCTTGACGTACCAGT+TGG | 0.553892 | 5.1:+76469548 | MS.gene37949:CDS |
| GGATAAGAAAGACGATGTAG+GGG | 0.555055 | 5.1:+76467825 | MS.gene37949:CDS |
| AGAGGATGGTATAAAAGCAA+TGG | 0.556456 | 5.1:+76467615 | MS.gene37949:CDS |
| AAAGAAAATGAAGGAACTGA+AGG | 0.559025 | 5.1:+76468587 | MS.gene37949:CDS |
| AGGATGAGAAAGTTGTTGAA+GGG | 0.560754 | 5.1:+76467752 | MS.gene37949:CDS |
| GTTCCCTTTCGTGCCGAGCG+TGG | 0.562593 | 5.1:-76471686 | None:intergenic |
| ATCATCAAGACGTTCTGCTA+AGG | 0.566618 | 5.1:+76470787 | MS.gene37949:CDS |
| TCCATCACTATCACCATGAT+CGG | 0.568310 | 5.1:-76471741 | None:intergenic |
| ATGGATAAGCAAGCTGATGA+TGG | 0.569226 | 5.1:+76467676 | MS.gene37949:CDS |
| CACGTCAAGACGTTCTGCTA+AGG | 0.570043 | 5.1:+76471263 | MS.gene37949:CDS |
| AGCCGGAGAAATCTGAAAGT+GGG | 0.571709 | 5.1:+76471549 | MS.gene37949:CDS |
| AGGATAAGAAAGACGATGCA+GGG | 0.573511 | 5.1:+76467965 | MS.gene37949:CDS |
| ACCATGATCGGATGCAGAGT+GGG | 0.576695 | 5.1:-76471729 | None:intergenic |
| GGATAAGAAAGTCAATGAAG+GGG | 0.576776 | 5.1:+76467897 | MS.gene37949:CDS |
| AAGAGGGGAAAGCTGATGAA+GGG | 0.579463 | 5.1:+76467929 | MS.gene37949:CDS |
| GATAAGAAAGTCAATGAAGG+GGG | 0.580294 | 5.1:+76467898 | MS.gene37949:CDS |
| CAGTTGGGAATGCAAATACA+AGG | 0.581246 | 5.1:+76469564 | MS.gene37949:CDS |
| AAGCCGGAGAAATCTGAAAG+TGG | 0.581270 | 5.1:+76471548 | MS.gene37949:CDS |
| AACGTCAAGACGATCTGCTA+AGG | 0.582795 | 5.1:+76470321 | MS.gene37949:CDS |
| TGGGAATGCAAATACAAGGA+AGG | 0.584888 | 5.1:+76469568 | MS.gene37949:CDS |
| AAAGGAGAAAAGTCGAGATG+AGG | 0.585952 | 5.1:+76468461 | MS.gene37949:CDS |
| GGAAGACTTGGTGAGAGTTG+AGG | 0.586612 | 5.1:-76471819 | None:intergenic |
| CCAACCGTCCTGTACGTGAA+AGG | 0.587863 | 5.1:+76468634 | MS.gene37949:CDS |
| AGTTAAAGCAAAACCACGCT+CGG | 0.590668 | 5.1:+76471673 | MS.gene37949:CDS |
| GAAAGATGAAGAAAACAAAG+AGG | 0.591937 | 5.1:+76470538 | MS.gene37949:CDS |
| CACTGTTCCTGACAAATCCA+AGG | 0.592153 | 5.1:+76471520 | MS.gene37949:CDS |
| TGAAGGGAAAGAAATAAAAG+AGG | 0.595089 | 5.1:+76467768 | MS.gene37949:CDS |
| CTCGAGTGAAAAGAAGGACC+CGG | 0.597637 | 5.1:+76467543 | MS.gene37949:CDS |
| AAGGAAATCAGTTCAGCGGT+TGG | 0.598635 | 5.1:+76468653 | MS.gene37949:CDS |
| ACCGAGTAGCTTCAAAATGT+CGG | 0.599252 | 5.1:-76472708 | None:intergenic |
| GAAAATGAAGGAACTGAAGG+AGG | 0.601330 | 5.1:+76468590 | MS.gene37949:CDS |
| TGAAGATTCTTCCGTAGCAG+AGG | 0.604934 | 5.1:+76471418 | MS.gene37949:CDS |
| TGATAAGAAAGCTGATGGGG+AGG | 0.606760 | 5.1:+76467642 | MS.gene37949:CDS |
| TCTTCCTCCAAAGACAAAGC+AGG | 0.608589 | 5.1:+76471836 | MS.gene37949:CDS |
| GATGCAGAGTGGGTCGACAA+TGG | 0.612997 | 5.1:-76471719 | None:intergenic |
| TGCAGGGGTAGAATTAAAAG+AGG | 0.613557 | 5.1:+76467981 | MS.gene37949:CDS |
| AGAGGGGAAAGCTGATGAAG+GGG | 0.613680 | 5.1:+76467930 | MS.gene37949:CDS |
| GGATAAGAAAGTTAATATTG+GGG | 0.615197 | 5.1:+76468074 | MS.gene37949:CDS |
| TATCCTTGAAAGCAAAGATG+AGG | 0.617284 | 5.1:+76468236 | MS.gene37949:CDS |
| AAAAGTCGAGATGAGGAGGT+GGG | 0.619228 | 5.1:+76468468 | MS.gene37949:CDS |
| AAGAAGGACCCGGAACCTAA+GGG | 0.623031 | 5.1:+76467553 | MS.gene37949:CDS |
| GGATAAGAAAGACGATGCAG+GGG | 0.625327 | 5.1:+76467966 | MS.gene37949:CDS |
| TGCGTAACTGATCATCACTC+GGG | 0.628020 | 5.1:-76472443 | None:intergenic |
| CACCATGATCGGATGCAGAG+TGG | 0.629161 | 5.1:-76471730 | None:intergenic |
| GCCGGAGAAATCTGAAAGTG+GGG | 0.631822 | 5.1:+76471550 | MS.gene37949:CDS |
| AAATTGATAAGAAAGCTGAT+GGG | 0.632945 | 5.1:+76467638 | MS.gene37949:CDS |
| TCCGATCATGGTGATAGTGA+TGG | 0.633583 | 5.1:+76471740 | MS.gene37949:CDS |
| CGGGAAAGGAAAGGTTGATG+GGG | 0.636918 | 5.1:+76468365 | MS.gene37949:CDS |
| TGACACGGAAGATGAGTCTG+AGG | 0.639914 | 5.1:+76471457 | MS.gene37949:CDS |
| ATTTCCTTTCACGTACAGGA+CGG | 0.640045 | 5.1:-76468638 | None:intergenic |
| CCTTTAGAAAATATACCCAA+TGG | 0.640565 | 5.1:+76468819 | MS.gene37949:CDS |
| CTTAGCAGAACGTCTTGACG+TGG | 0.642847 | 5.1:-76471262 | None:intergenic |
| AGATAACATTGGCATGAGTG+AGG | 0.643975 | 5.1:+76467459 | None:intergenic |
| ATCCTTGAAAGCAAAGATGA+GGG | 0.644303 | 5.1:+76468237 | MS.gene37949:CDS |
| TACAAAAGAGGATTGTATGG+AGG | 0.648735 | 5.1:-76469046 | None:intergenic |
| GGATGGGGAAGGAATAAAAG+AGG | 0.653046 | 5.1:+76467732 | MS.gene37949:CDS |
| TGATAGTGATGGAAGTCCCA+AGG | 0.653632 | 5.1:+76471751 | MS.gene37949:CDS |
| TAAAGGGGAAGAATTAAAGG+AGG | 0.653663 | 5.1:+76468053 | MS.gene37949:CDS |
| TTAGCAGATCGTCTTGACGT+TGG | 0.655765 | 5.1:-76470319 | None:intergenic |
| AATTGATAAGAAAGCTGATG+GGG | 0.657202 | 5.1:+76467639 | MS.gene37949:CDS |
| AAACAGCGCATAGCAAAACA+AGG | 0.662113 | 5.1:+76470277 | MS.gene37949:CDS |
| GATACACTTGTTGTGACTTG+AGG | 0.670370 | 5.1:-76470096 | None:intergenic |
| GAGAAAAGGATTTACTGACA+CGG | 0.671908 | 5.1:+76471442 | MS.gene37949:CDS |
| AAGGACCCGGAACCTAAGGG+AGG | 0.685854 | 5.1:+76467556 | MS.gene37949:CDS |
| TTCAGGTAAGCAATTCGACG+TGG | 0.687225 | 5.1:+76472971 | MS.gene37949:intron |
| GTGAAAGGAAATCAGTTCAG+CGG | 0.696158 | 5.1:+76468649 | MS.gene37949:CDS |
| TTTCACTCGAGTCTTCTAGG+TGG | 0.696693 | 5.1:-76467531 | None:intergenic |
| TGAGAATGACAAATTCAGTG+AGG | 0.705125 | 5.1:+76468137 | MS.gene37949:CDS |
| AGAGAACGAAGAGAACGACA+GGG | 0.709851 | 5.1:+76473071 | MS.gene37949:CDS |
| AGAAAACAATAACAAAACCG+GGG | 0.717065 | 5.1:+76467711 | MS.gene37949:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAATAATATTATAAAA+AGG | + | chr5.1:76472117-76472136 | MS.gene37949:intron | 0.0% |
| !! | AACATTTAATCATAAAATTA+AGG | - | chr5.1:76471933-76471952 | None:intergenic | 10.0% |
| !! | ACATTTAATCATAAAATTAA+GGG | - | chr5.1:76471932-76471951 | None:intergenic | 10.0% |
| !! | TGATTAAGAAAAATATATTA+AGG | + | chr5.1:76469310-76469329 | MS.gene37949:CDS | 10.0% |
| !! | TTAAAATTAAAATCAACATT+AGG | - | chr5.1:76472608-76472627 | None:intergenic | 10.0% |
| !!! | AAATAACATATTTTTAACAA+AGG | + | chr5.1:76472149-76472168 | MS.gene37949:intron | 10.0% |
| !!! | AATAACATATTTTTAACAAA+GGG | + | chr5.1:76472150-76472169 | MS.gene37949:intron | 10.0% |
| !!! | ATTTTATGATTAAATGTTTT+TGG | + | chr5.1:76471935-76471954 | MS.gene37949:intron | 10.0% |
| !!! | TTTTTTTTACAAGAAAAAAA+AGG | - | chr5.1:76472005-76472024 | None:intergenic | 10.0% |
| !! | AAAAAGGTAATAATAAAGAA+GGG | - | chr5.1:76472739-76472758 | None:intergenic | 15.0% |
| !! | ATGAAATCTGTAATATAAAA+AGG | - | chr5.1:76472217-76472236 | None:intergenic | 15.0% |
| !! | ATTTATACTACTATTATACT+CGG | + | chr5.1:76469856-76469875 | MS.gene37949:intron | 15.0% |
| !! | TGAAATCTGTAATATAAAAA+GGG | - | chr5.1:76472216-76472235 | None:intergenic | 15.0% |
| !! | TGATTTATAACCAATAAATT+TGG | + | chr5.1:76470412-76470431 | MS.gene37949:intron | 15.0% |
| !!! | AAAAATATATTAAGGTTTTC+TGG | + | chr5.1:76469318-76469337 | MS.gene37949:CDS | 15.0% |
| !!! | AATATTAAACCTCTAAAAAA+AGG | - | chr5.1:76472037-76472056 | None:intergenic | 15.0% |
| !!! | ATATTTTAACAGATAACAAA+TGG | - | chr5.1:76469135-76469154 | None:intergenic | 15.0% |
| !!! | TGCTTTAAAACTAATAAATT+TGG | + | chr5.1:76470894-76470913 | MS.gene37949:intron | 15.0% |
| !! | AAAAAGGGAATAATCTATTT+GGG | - | chr5.1:76472201-76472220 | None:intergenic | 20.0% |
| !! | AAATGTAACTAGATATATGA+TGG | + | chr5.1:76471318-76471337 | MS.gene37949:intron | 20.0% |
| !! | AAGAAGAAAAATGAAAAACA+AGG | + | chr5.1:76471785-76471804 | MS.gene37949:CDS | 20.0% |
| !! | AATTTCATTATTCAAGGTAA+GGG | - | chr5.1:76469221-76469240 | None:intergenic | 20.0% |
| !! | ACCTTGAATAATGAAATTAA+CGG | + | chr5.1:76469223-76469242 | MS.gene37949:intron | 20.0% |
| !! | AGAGAATATATAGATCATAA+TGG | - | chr5.1:76468876-76468895 | None:intergenic | 20.0% |
| !! | AGATTTATAAACTACATAAG+AGG | - | chr5.1:76472358-76472377 | None:intergenic | 20.0% |
| !! | AGGATAAGAAAGTTAATATT+GGG | + | chr5.1:76468073-76468092 | MS.gene37949:CDS | 20.0% |
| !! | ATAAGAAAGATGATGATAAT+GGG | + | chr5.1:76468112-76468131 | MS.gene37949:CDS | 20.0% |
| !! | ATTTAAATTATCTAGAAGGA+AGG | + | chr5.1:76469004-76469023 | MS.gene37949:CDS | 20.0% |
| !! | ATTTAGATATATACCATTAG+TGG | + | chr5.1:76470384-76470403 | MS.gene37949:intron | 20.0% |
| !! | CAAAAAGGTAATAATAAAGA+AGG | - | chr5.1:76472740-76472759 | None:intergenic | 20.0% |
| !! | TAAAAAGGGAATAATCTATT+TGG | - | chr5.1:76472202-76472221 | None:intergenic | 20.0% |
| !! | TAATTTCATTATTCAAGGTA+AGG | - | chr5.1:76469222-76469241 | None:intergenic | 20.0% |
| !! | TATCTAATTAATGTGTATTC+CGG | - | chr5.1:76469750-76469769 | None:intergenic | 20.0% |
| !! | TCATTATTAAACTTAAACCA+AGG | - | chr5.1:76472764-76472783 | None:intergenic | 20.0% |
| !! | TGACTGAAATGAAAAAAATT+AGG | - | chr5.1:76469105-76469124 | None:intergenic | 20.0% |
| !! | TTCAATATAACACACAATTA+AGG | - | chr5.1:76468751-76468770 | None:intergenic | 20.0% |
| !!! | AATCAATATGTTAAAAGCAT+CGG | - | chr5.1:76469813-76469832 | None:intergenic | 20.0% |
| !!! | AATTGTTTTTTTAGAGAAAG+TGG | + | chr5.1:76470866-76470885 | MS.gene37949:intron | 20.0% |
| !!! | GTTTCTTTATTTATCAAAGA+CGG | + | chr5.1:76472847-76472866 | MS.gene37949:intron | 20.0% |
| !!! | TTGAATTTTTGTAACATTAC+AGG | + | chr5.1:76469724-76469743 | MS.gene37949:intron | 20.0% |
| ! | AAAAAACAATTTATCGCTTC+TGG | - | chr5.1:76470857-76470876 | None:intergenic | 25.0% |
| ! | AAATTGATAAGAAAGCTGAT+GGG | + | chr5.1:76467638-76467657 | MS.gene37949:CDS | 25.0% |
| ! | ACAGAAAACAATAACAAAAC+CGG | + | chr5.1:76467709-76467728 | MS.gene37949:CDS | 25.0% |
| ! | ACTAGAAATATTTAGAAAGG+CGG | - | chr5.1:76471908-76471927 | None:intergenic | 25.0% |
| ! | AGAATAAAATAACACACTAG+GGG | - | chr5.1:76470639-76470658 | None:intergenic | 25.0% |
| ! | AGAGAATAAAATAACACACT+AGG | - | chr5.1:76471117-76471136 | None:intergenic | 25.0% |
| ! | AGATGTTAAGTCAACAAAAA+AGG | - | chr5.1:76469986-76470005 | None:intergenic | 25.0% |
| ! | AGGAAAAAGTTGAAAAGAAA+GGG | - | chr5.1:76470154-76470173 | None:intergenic | 25.0% |
| ! | ATAAATCACTTTACCACTAA+TGG | - | chr5.1:76470400-76470419 | None:intergenic | 25.0% |
| ! | CAAAGAATTTCAAATTGAAG+AGG | + | chr5.1:76468701-76468720 | MS.gene37949:CDS | 25.0% |
| ! | CAGAATAAAATAACACACTA+GGG | - | chr5.1:76470640-76470659 | None:intergenic | 25.0% |
| ! | GAAAGAAGAATTCAAACAAA+TGG | - | chr5.1:76468854-76468873 | None:intergenic | 25.0% |
| ! | GAATGTGAAAAAGAAAATGA+AGG | + | chr5.1:76468389-76468408 | MS.gene37949:CDS | 25.0% |
| ! | GAGAATAAAATAACACACTA+GGG | - | chr5.1:76471116-76471135 | None:intergenic | 25.0% |
| ! | GAGGATAAGAAAGTTAATAT+TGG | + | chr5.1:76468072-76468091 | MS.gene37949:CDS | 25.0% |
| ! | GATAAGAAAGATGATGATAA+TGG | + | chr5.1:76468111-76468130 | MS.gene37949:CDS | 25.0% |
| ! | GATTAGAAAGCCAAATTTAT+CGG | - | chr5.1:76470425-76470444 | None:intergenic | 25.0% |
| ! | GATTAGAAAGCCAAATTTAT+TGG | - | chr5.1:76470425-76470444 | None:intergenic | 25.0% |
| ! | GGAAAAGTTTGAAAAGAAAA+GGG | - | chr5.1:76471094-76471113 | None:intergenic | 25.0% |
| ! | GGATAAGAAAGTTAATATTG+GGG | + | chr5.1:76468074-76468093 | MS.gene37949:CDS | 25.0% |
| ! | GGTACTAGAAATATTTAGAA+AGG | - | chr5.1:76471911-76471930 | None:intergenic | 25.0% |
| ! | TAAAATCAACATTAGGATGT+AGG | - | chr5.1:76472601-76472620 | None:intergenic | 25.0% |
| ! | TAATATTGTTCCATTGTAAG+AGG | + | chr5.1:76472050-76472069 | MS.gene37949:intron | 25.0% |
| ! | TATTAATCTTCTACATATGC+AGG | + | chr5.1:76470035-76470054 | MS.gene37949:intron | 25.0% |
| ! | TCCGTTAATTTCATTATTCA+AGG | - | chr5.1:76469227-76469246 | None:intergenic | 25.0% |
| ! | TGAAAAATCTGAAGATGAAA+AGG | + | chr5.1:76471056-76471075 | MS.gene37949:CDS | 25.0% |
| ! | TGGCAAAGAAGATTAAAATA+AGG | + | chr5.1:76471955-76471974 | MS.gene37949:intron | 25.0% |
| ! | TGGCATTTAAATTATCTAGA+AGG | + | chr5.1:76469000-76469019 | MS.gene37949:CDS | 25.0% |
| ! | TTTGTTCTTGATCTTTCTTT+CGG | - | chr5.1:76472412-76472431 | None:intergenic | 25.0% |
| !! | ACAAATGAGTGTAACTTTTA+TGG | + | chr5.1:76472812-76472831 | MS.gene37949:intron | 25.0% |
| !! | CTCTTCAATTTGAAATTCTT+TGG | - | chr5.1:76468703-76468722 | None:intergenic | 25.0% |
| !! | TACTTTTATCAGTCGATTAA+AGG | + | chr5.1:76471189-76471208 | MS.gene37949:intron | 25.0% |
| !! | TATTATTACCTTTTTGTCCT+TGG | + | chr5.1:76472744-76472763 | MS.gene37949:intron | 25.0% |
| !!! | AATTTGGCTTTCTAATCTTT+AGG | + | chr5.1:76470428-76470447 | MS.gene37949:intron | 25.0% |
| !!! | ACTTGAGAAAGTATTGAAAA+AGG | + | chr5.1:76468536-76468555 | MS.gene37949:CDS | 25.0% |
| !!! | ATCATTGTTCCTTTTTTTAG+AGG | + | chr5.1:76472025-76472044 | MS.gene37949:intron | 25.0% |
| !!! | ATTTGGCTTTCTAATCTTTA+GGG | + | chr5.1:76470429-76470448 | MS.gene37949:intron | 25.0% |
| !!! | ATTTGGCTTTCTAATCTTTA+TGG | + | chr5.1:76470429-76470448 | MS.gene37949:intron | 25.0% |
| !!! | CTTGAGAAAGTATTGAAAAA+GGG | + | chr5.1:76468537-76468556 | MS.gene37949:CDS | 25.0% |
| !!! | TCATTTTGTTATATATGACC+TGG | - | chr5.1:76469385-76469404 | None:intergenic | 25.0% |
| !!! | TGCTTTAAAACCGATAAATT+TGG | + | chr5.1:76471352-76471371 | MS.gene37949:intron | 25.0% |
| AAAACTGACATTAACATGCT+AGG | + | chr5.1:76467505-76467524 | MS.gene37949:CDS | 30.0% | |
| AAACCAAATATTGTTACTGC+AGG | + | chr5.1:76469457-76469476 | MS.gene37949:intron | 30.0% | |
| AAACTGACATTAACATGCTA+GGG | + | chr5.1:76467506-76467525 | MS.gene37949:CDS | 30.0% | |
| AAAGAAAATGAAGGAACTGA+AGG | + | chr5.1:76468398-76468417 | MS.gene37949:CDS | 30.0% | |
| AAATGAGGTATGTTTGTAAC+TGG | + | chr5.1:76469356-76469375 | MS.gene37949:intron | 30.0% | |
| AAATGGAACACTATACCATT+GGG | - | chr5.1:76468837-76468856 | None:intergenic | 30.0% | |
| AACGGCATAATAAATTGCTA+CGG | - | chr5.1:76469775-76469794 | None:intergenic | 30.0% | |
| AACTTAAACCAAGGACAAAA+AGG | - | chr5.1:76472755-76472774 | None:intergenic | 30.0% | |
| AATATCCTTAACTATAGAGG+TGG | - | chr5.1:76469166-76469185 | None:intergenic | 30.0% | |
| AATATTGTTACTGCAGGAAA+AGG | + | chr5.1:76469463-76469482 | MS.gene37949:intron | 30.0% | |
| AATTGATAAGAAAGCTGATG+GGG | + | chr5.1:76467639-76467658 | MS.gene37949:CDS | 30.0% | |
| ACAGAATAAAGTAACACACT+AGG | - | chr5.1:76470181-76470200 | None:intergenic | 30.0% | |
| ACCTCTATAGTTAAGGATAT+TGG | + | chr5.1:76469165-76469184 | MS.gene37949:intron | 30.0% | |
| AGAAAACAATAACAAAACCG+GGG | + | chr5.1:76467711-76467730 | MS.gene37949:CDS | 30.0% | |
| AGAAGAGATTGAAAAAAAGC+GGG | + | chr5.1:76468346-76468365 | MS.gene37949:CDS | 30.0% | |
| AGGATAAGAAAGTCAATGAA+GGG | + | chr5.1:76467896-76467915 | MS.gene37949:CDS | 30.0% | |
| AGTTACACTCATTTGTAATC+TGG | - | chr5.1:76472808-76472827 | None:intergenic | 30.0% | |
| ATACAACAAATGTGTCAACA+GGG | - | chr5.1:76469608-76469627 | None:intergenic | 30.0% | |
| ATATCCTTAACTATAGAGGT+GGG | - | chr5.1:76469165-76469184 | None:intergenic | 30.0% | |
| ATATGAACTACCTCTTACAA+TGG | - | chr5.1:76472063-76472082 | None:intergenic | 30.0% | |
| ATTCCACTAGTTATTGATGA+AGG | - | chr5.1:76472543-76472562 | None:intergenic | 30.0% | |
| ATTCCTTCATCAATAACTAG+TGG | + | chr5.1:76472537-76472556 | MS.gene37949:intron | 30.0% | |
| CAGAAAACAATAACAAAACC+GGG | + | chr5.1:76467710-76467729 | MS.gene37949:CDS | 30.0% | |
| CCTTTAGTTGACTGAAAATA+GGG | - | chr5.1:76470256-76470275 | None:intergenic | 30.0% | |
| CGGTAATTCATTATAGACAA+CGG | - | chr5.1:76469793-76469812 | None:intergenic | 30.0% | |
| GAAAGATGAAGAAAACAAAG+AGG | + | chr5.1:76470538-76470557 | MS.gene37949:CDS | 30.0% | |
| GAAATTGATAAGAAAGCTGA+TGG | + | chr5.1:76467637-76467656 | MS.gene37949:CDS | 30.0% | |
| GAGAAGAGATTGAAAAAAAG+CGG | + | chr5.1:76468345-76468364 | MS.gene37949:CDS | 30.0% | |
| GAGGAAAAAGTTGAAAAGAA+AGG | - | chr5.1:76470155-76470174 | None:intergenic | 30.0% | |
| GCAGAATAAAATAACACACT+AGG | - | chr5.1:76470641-76470660 | None:intergenic | 30.0% | |
| GGAAAAGGTTGAAAAGAAAA+GGG | - | chr5.1:76470618-76470637 | None:intergenic | 30.0% | |
| GGATAAACAAAAAAACTGAG+AGG | - | chr5.1:76471887-76471906 | None:intergenic | 30.0% | |
| GGGAAAAGTTTGAAAAGAAA+AGG | - | chr5.1:76471095-76471114 | None:intergenic | 30.0% | |
| TAAACAAAAAAACTGAGAGG+CGG | - | chr5.1:76471884-76471903 | None:intergenic | 30.0% | |
| TAAAGGGGAAGAATTAAAAG+AGG | + | chr5.1:76468017-76468036 | MS.gene37949:CDS | 30.0% | |
| TACATAAGAGGAAGAAGTTA+AGG | - | chr5.1:76472346-76472365 | None:intergenic | 30.0% | |
| TATTGGGGATGAAATTAAAG+AGG | + | chr5.1:76468089-76468108 | MS.gene37949:CDS | 30.0% | |
| TCCAATATCCTTAACTATAG+AGG | - | chr5.1:76469169-76469188 | None:intergenic | 30.0% | |
| TCCTTTAGTTGACTGAAAAT+AGG | - | chr5.1:76470257-76470276 | None:intergenic | 30.0% | |
| TGAAGGGAAAGAAATAAAAG+AGG | + | chr5.1:76467768-76467787 | MS.gene37949:CDS | 30.0% | |
| TGAAGGGGAAAAATTAAAAG+AGG | + | chr5.1:76467945-76467964 | MS.gene37949:CDS | 30.0% | |
| TGACAAATCTGAAGATGAAA+AGG | + | chr5.1:76470580-76470599 | MS.gene37949:CDS | 30.0% | |
| TGATAAAGGGGAAGAATTAA+AGG | + | chr5.1:76468014-76468033 | MS.gene37949:CDS | 30.0% | |
| TTCATCCTTAGACTGTTAAA+AGG | + | chr5.1:76469192-76469211 | MS.gene37949:intron | 30.0% | |
| TTTCCTGCAGTAACAATATT+TGG | - | chr5.1:76469463-76469482 | None:intergenic | 30.0% | |
| ! | AATTAGGTTGTTCATGAAGT+AGG | - | chr5.1:76469089-76469108 | None:intergenic | 30.0% |
| ! | AGTTTTTCTTTCACTTTGCA+GGG | + | chr5.1:76468786-76468805 | MS.gene37949:intron | 30.0% |
| ! | ATTTTTGTAACATTACAGGC+CGG | + | chr5.1:76469728-76469747 | MS.gene37949:intron | 30.0% |
| ! | CCATTGGGTATATTTTCTAA+AGG | - | chr5.1:76468822-76468841 | None:intergenic | 30.0% |
| ! | CCTTTAGAAAATATACCCAA+TGG | + | chr5.1:76468819-76468838 | MS.gene37949:CDS | 30.0% |
| ! | CTCTGAAAAATGTACCATAA+AGG | - | chr5.1:76470928-76470947 | None:intergenic | 30.0% |
| ! | TAGCATGTTAATGTCAGTTT+TGG | - | chr5.1:76467506-76467525 | None:intergenic | 30.0% |
| ! | TAGTTTTTCTTTCACTTTGC+AGG | + | chr5.1:76468785-76468804 | MS.gene37949:intron | 30.0% |
| ! | TGTTTTACTATGTAATTCGC+AGG | + | chr5.1:76469281-76469300 | MS.gene37949:intron | 30.0% |
| !! | AGAAAGTATTGAAAAAGGGT+GGG | + | chr5.1:76468541-76468560 | MS.gene37949:CDS | 30.0% |
| !! | AGGATAAGAAAGTTGATGTT+AGG | + | chr5.1:76467860-76467879 | MS.gene37949:CDS | 30.0% |
| !! | ATTTGGCTTTCTAACCTTTA+TGG | + | chr5.1:76470911-76470930 | MS.gene37949:intron | 30.0% |
| !! | TAGGGTATATTTTTCAGAGT+CGG | + | chr5.1:76471387-76471406 | MS.gene37949:intron | 30.0% |
| !! | TATGGTACATTTTTCAGAGT+CGG | + | chr5.1:76470929-76470948 | MS.gene37949:intron | 30.0% |
| !! | TATGGTATATTTTTCAGCGT+CGG | + | chr5.1:76470447-76470466 | MS.gene37949:intron | 30.0% |
| !! | TTTAGCTTTACTTTGTGCAA+CGG | - | chr5.1:76471645-76471664 | None:intergenic | 30.0% |
| !!! | CTGTTTTTTTCCAGAAGAAA+AGG | + | chr5.1:76472383-76472402 | MS.gene37949:intron | 30.0% |
| AAAATTGCTGACCATTGTTC+AGG | + | chr5.1:76472954-76472973 | MS.gene37949:intron | 35.0% | |
| AAACAAAGTTCATCGAGATC+TGG | + | chr5.1:76471234-76471253 | MS.gene37949:CDS | 35.0% | |
| AAACAAGGTTCATCAAGATC+TGG | + | chr5.1:76470758-76470777 | MS.gene37949:CDS | 35.0% | |
| AAAGTAACACACTAGGTTAG+AGG | - | chr5.1:76470174-76470193 | None:intergenic | 35.0% | |
| AAATAACACACTAGGGGAAA+AGG | - | chr5.1:76470633-76470652 | None:intergenic | 35.0% | |
| ACGACACGAGTATAATATTC+TGG | - | chr5.1:76469915-76469934 | None:intergenic | 35.0% | |
| AGAAGCAGAAACACGTATAT+AGG | - | chr5.1:76468935-76468954 | None:intergenic | 35.0% | |
| AGAGGAAGAAGTTAAGGTAA+TGG | - | chr5.1:76472340-76472359 | None:intergenic | 35.0% | |
| AGAGGATGGTATAAAAGCAA+TGG | + | chr5.1:76467615-76467634 | MS.gene37949:CDS | 35.0% | |
| AGATTGAAAAAAAGCGGGAA+AGG | + | chr5.1:76468351-76468370 | MS.gene37949:CDS | 35.0% | |
| AGGAGAAGAAAGCTGATAAA+GGG | + | chr5.1:76468001-76468020 | MS.gene37949:CDS | 35.0% | |
| AGGATAAGAAAGACGATGTA+GGG | + | chr5.1:76467824-76467843 | MS.gene37949:CDS | 35.0% | |
| AGGATGAGAAAGTTGTTGAA+GGG | + | chr5.1:76467752-76467771 | MS.gene37949:CDS | 35.0% | |
| ATAAATTACGCCTCTAGTGA+AGG | + | chr5.1:76472627-76472646 | MS.gene37949:intron | 35.0% | |
| ATCACTTGCAGAACAAGAAA+AGG | + | chr5.1:76470116-76470135 | MS.gene37949:CDS | 35.0% | |
| ATCCTTGAAAGCAAAGATGA+GGG | + | chr5.1:76468237-76468256 | MS.gene37949:CDS | 35.0% | |
| ATGAGAAGAAAGTGAGTGAA+AGG | + | chr5.1:76471591-76471610 | MS.gene37949:CDS | 35.0% | |
| ATGTAACAAAGAGAAGTTGC+TGG | + | chr5.1:76469517-76469536 | MS.gene37949:CDS | 35.0% | |
| CAAATACAAGGAAGGTTTGT+TGG | + | chr5.1:76469576-76469595 | MS.gene37949:intron | 35.0% | |
| CAAATGGAACACTATACCAT+TGG | - | chr5.1:76468838-76468857 | None:intergenic | 35.0% | |
| CATACAACAAATGTGTCAAC+AGG | - | chr5.1:76469609-76469628 | None:intergenic | 35.0% | |
| GAAAAATCAAGAAGACAGAG+AGG | + | chr5.1:76468272-76468291 | MS.gene37949:CDS | 35.0% | |
| GAAGGCGAAAAAGAAAATGA+AGG | + | chr5.1:76468578-76468597 | MS.gene37949:CDS | 35.0% | |
| GAGAAAAGGATTTACTGACA+CGG | + | chr5.1:76471442-76471461 | MS.gene37949:CDS | 35.0% | |
| GAGGAAGAAGTTAAGGTAAT+GGG | - | chr5.1:76472339-76472358 | None:intergenic | 35.0% | |
| GAGGATAAGAAAGTCAATGA+AGG | + | chr5.1:76467895-76467914 | MS.gene37949:CDS | 35.0% | |
| GATAAGAAAGTCAATGAAGG+GGG | + | chr5.1:76467898-76467917 | MS.gene37949:CDS | 35.0% | |
| GGATAAGAAAGTCAATGAAG+GGG | + | chr5.1:76467897-76467916 | MS.gene37949:CDS | 35.0% | |
| GGGAAAAGGTTGAAAAGAAA+AGG | - | chr5.1:76470619-76470638 | None:intergenic | 35.0% | |
| GTCAAAGATTTGAAAGAGGA+TGG | + | chr5.1:76467601-76467620 | MS.gene37949:CDS | 35.0% | |
| TAAAGGGGAAGAATTAAAGG+AGG | + | chr5.1:76468053-76468072 | MS.gene37949:CDS | 35.0% | |
| TAAGGGAGGAAAAATCTTTG+AGG | + | chr5.1:76467570-76467589 | MS.gene37949:CDS | 35.0% | |
| TACAAAAGAGGATTGTATGG+AGG | - | chr5.1:76469049-76469068 | None:intergenic | 35.0% | |
| TATCCTTAACTATAGAGGTG+GGG | - | chr5.1:76469164-76469183 | None:intergenic | 35.0% | |
| TATCCTTGAAAGCAAAGATG+AGG | + | chr5.1:76468236-76468255 | MS.gene37949:CDS | 35.0% | |
| TCCTACAAAAGAGGATTGTA+TGG | - | chr5.1:76469052-76469071 | None:intergenic | 35.0% | |
| TCCTTTACTCGACTGATAAA+AGG | - | chr5.1:76470717-76470736 | None:intergenic | 35.0% | |
| TCTTTACAGATGCCTTTCTT+GGG | - | chr5.1:76473004-76473023 | None:intergenic | 35.0% | |
| TGAAGGAGAAGAACTAAAAG+AGG | + | chr5.1:76467804-76467823 | MS.gene37949:CDS | 35.0% | |
| TGAGAATGACAAATTCAGTG+AGG | + | chr5.1:76468137-76468156 | MS.gene37949:CDS | 35.0% | |
| TGCTGTCAAAGATTTGAAAG+AGG | + | chr5.1:76467597-76467616 | MS.gene37949:CDS | 35.0% | |
| ! | CCCTATTTTCAGTCAACTAA+AGG | + | chr5.1:76470253-76470272 | MS.gene37949:intron | 35.0% |
| ! | CTTTTCAATGCTCTCATCTT+TGG | - | chr5.1:76468445-76468464 | None:intergenic | 35.0% |
| ! | GGTAACCTTTTAACAGTCTA+AGG | - | chr5.1:76469200-76469219 | None:intergenic | 35.0% |
| ! | TCAAAGATTTTTCCTCCCTT+AGG | - | chr5.1:76467571-76467590 | None:intergenic | 35.0% |
| ! | TCCATACAATCCTCTTTTGT+AGG | + | chr5.1:76469048-76469067 | MS.gene37949:CDS | 35.0% |
| ! | TCCTTTTATCAGTCGAGTAA+AGG | + | chr5.1:76470713-76470732 | MS.gene37949:intron | 35.0% |
| ! | TTTTCATCCTTGGATTTGTC+AGG | - | chr5.1:76471530-76471549 | None:intergenic | 35.0% |
| ! | TTTTGTGTGGCATGAAAATG+AGG | + | chr5.1:76469341-76469360 | MS.gene37949:CDS | 35.0% |
| !! | AGTCAACAAAAAAGGCATCA+AGG | - | chr5.1:76469978-76469997 | None:intergenic | 35.0% |
| !! | CAAAGATGAGAGCATTGAAA+AGG | + | chr5.1:76468443-76468462 | MS.gene37949:CDS | 35.0% |
| !! | CGGAGAATTTTGAAGATAGA+AGG | + | chr5.1:76472867-76472886 | MS.gene37949:intron | 35.0% |
| !! | CTGTTGACACATTTGTTGTA+TGG | + | chr5.1:76469607-76469626 | MS.gene37949:intron | 35.0% |
| !! | GAGAAAGTATTGAAAAAGGG+TGG | + | chr5.1:76468540-76468559 | MS.gene37949:CDS | 35.0% |
| !!! | GTTTTGGAAGCTGTATTAAC+TGG | - | chr5.1:76467490-76467509 | None:intergenic | 35.0% |
| !!! | TAAGGTTTTCTGGTTTTGTG+TGG | + | chr5.1:76469328-76469347 | MS.gene37949:CDS | 35.0% |
| AAACAGCGCATAGCAAAACA+AGG | + | chr5.1:76470277-76470296 | MS.gene37949:CDS | 40.0% | |
| AAAGGAGAAAAGTCGAGATG+AGG | + | chr5.1:76468461-76468480 | MS.gene37949:CDS | 40.0% | |
| AACAATAACAAAACCGGGGA+TGG | + | chr5.1:76467715-76467734 | MS.gene37949:CDS | 40.0% | |
| AAGGATACTCTCTTCATCCA+TGG | - | chr5.1:76468223-76468242 | None:intergenic | 40.0% | |
| ACAATAACAAAACCGGGGAT+GGG | + | chr5.1:76467716-76467735 | MS.gene37949:CDS | 40.0% | |
| ACACAACAGCAATGCTAATC+TGG | - | chr5.1:76472574-76472593 | None:intergenic | 40.0% | |
| ACCGAGTAGCTTCAAAATGT+CGG | - | chr5.1:76472711-76472730 | None:intergenic | 40.0% | |
| ACTAATCACTAGAACGCGAA+AGG | - | chr5.1:76472263-76472282 | None:intergenic | 40.0% | |
| AGAAGACAGAGAGGATGATA+AGG | + | chr5.1:76468281-76468300 | MS.gene37949:CDS | 40.0% | |
| AGAAGACTCGAGTGAAAAGA+AGG | + | chr5.1:76467537-76467556 | MS.gene37949:CDS | 40.0% | |
| AGGATAAGAAAGACGATGCA+GGG | + | chr5.1:76467965-76467984 | MS.gene37949:CDS | 40.0% | |
| AGGGAATAATCTATTTGGGC+TGG | - | chr5.1:76472197-76472216 | None:intergenic | 40.0% | |
| AGTTAAAGCAAAACCACGCT+CGG | + | chr5.1:76471673-76471692 | MS.gene37949:CDS | 40.0% | |
| ATAGCAAAACAAGGCTCAAC+AGG | + | chr5.1:76470286-76470305 | MS.gene37949:CDS | 40.0% | |
| ATCATCAAGACGTTCTGCTA+AGG | + | chr5.1:76470787-76470806 | MS.gene37949:CDS | 40.0% | |
| ATGGATAAGCAAGCTGATGA+TGG | + | chr5.1:76467676-76467695 | MS.gene37949:CDS | 40.0% | |
| ATTTCCTTTCACGTACAGGA+CGG | - | chr5.1:76468641-76468660 | None:intergenic | 40.0% | |
| CAAATCCAAGGATGAAAAGC+CGG | + | chr5.1:76471532-76471551 | MS.gene37949:CDS | 40.0% | |
| CAACAGAAAACCTTCACTAG+AGG | - | chr5.1:76472640-76472659 | None:intergenic | 40.0% | |
| CAGAGAGGATGATAAGGATA+AGG | + | chr5.1:76468287-76468306 | MS.gene37949:CDS | 40.0% | |
| CAGTTGGGAATGCAAATACA+AGG | + | chr5.1:76469564-76469583 | MS.gene37949:CDS | 40.0% | |
| CGAATTGCTTACCTGAACAA+TGG | - | chr5.1:76472968-76472987 | None:intergenic | 40.0% | |
| CTTGTATTTGCATTCCCAAC+TGG | - | chr5.1:76469566-76469585 | None:intergenic | 40.0% | |
| CTTTACAGATGCCTTTCTTG+GGG | - | chr5.1:76473003-76473022 | None:intergenic | 40.0% | |
| GAAAAAAAGCGGGAAAGGAA+AGG | + | chr5.1:76468356-76468375 | MS.gene37949:CDS | 40.0% | |
| GAAAATGAAGGAACTGAAGG+AGG | + | chr5.1:76468590-76468609 | MS.gene37949:CDS | 40.0% | |
| GAAGGAACTGAAGAAGATAG+AGG | + | chr5.1:76468407-76468426 | MS.gene37949:CDS | 40.0% | |
| GACTATTATTCAGCAAGAGC+TGG | + | chr5.1:76473022-76473041 | MS.gene37949:CDS | 40.0% | |
| GAGGAGAAGAAAGCTGATAA+AGG | + | chr5.1:76468000-76468019 | MS.gene37949:CDS | 40.0% | |
| GAGGATAAGAAAGACGATGT+AGG | + | chr5.1:76467823-76467842 | MS.gene37949:CDS | 40.0% | |
| GAGGATGAGAAAGTTGTTGA+AGG | + | chr5.1:76467751-76467770 | MS.gene37949:CDS | 40.0% | |
| GGAGAAGAAAGCTGATAAAG+GGG | + | chr5.1:76468002-76468021 | MS.gene37949:CDS | 40.0% | |
| GGATAAGAAAGACGATGTAG+GGG | + | chr5.1:76467825-76467844 | MS.gene37949:CDS | 40.0% | |
| GTATCTACCTGCTTTGTCTT+TGG | - | chr5.1:76471846-76471865 | None:intergenic | 40.0% | |
| GTCTTTACAGATGCCTTTCT+TGG | - | chr5.1:76473005-76473024 | None:intergenic | 40.0% | |
| GTGAAAGGAAATCAGTTCAG+CGG | + | chr5.1:76468649-76468668 | MS.gene37949:CDS | 40.0% | |
| TAACTTGAGACGAGTGTTTC+TGG | + | chr5.1:76470663-76470682 | MS.gene37949:intron | 40.0% | |
| TATGTTTGTAACTGGCAACC+AGG | + | chr5.1:76469364-76469383 | MS.gene37949:intron | 40.0% | |
| TCATCCATGGCATCTAATTC+AGG | - | chr5.1:76468210-76468229 | None:intergenic | 40.0% | |
| TCCATCACTATCACCATGAT+CGG | - | chr5.1:76471744-76471763 | None:intergenic | 40.0% | |
| TCTGCTAAGGTGAGATTTCA+TGG | + | chr5.1:76470334-76470353 | MS.gene37949:intron | 40.0% | |
| TGCAGGGGTAGAATTAAAAG+AGG | + | chr5.1:76467981-76468000 | MS.gene37949:CDS | 40.0% | |
| TGCGAAGCTAATAGACTTTC+TGG | + | chr5.1:76470068-76470087 | MS.gene37949:CDS | 40.0% | |
| TGGGAATGCAAATACAAGGA+AGG | + | chr5.1:76469568-76469587 | MS.gene37949:CDS | 40.0% | |
| TGTAGGGGAAGAAAGAAAAG+AGG | + | chr5.1:76467840-76467859 | MS.gene37949:CDS | 40.0% | |
| TGTTAGGCAAGAGGTAAAAG+AGG | + | chr5.1:76467876-76467895 | MS.gene37949:CDS | 40.0% | |
| TTGCGTAACTGATCATCACT+CGG | - | chr5.1:76472447-76472466 | None:intergenic | 40.0% | |
| ! | ACAATCCTCTTTTGTAGGAG+AGG | + | chr5.1:76469053-76469072 | MS.gene37949:CDS | 40.0% |
| ! | ACTGATTTCCTTTCACGTAC+AGG | - | chr5.1:76468645-76468664 | None:intergenic | 40.0% |
| ! | ATTTTTCCTCCCTTAGGTTC+CGG | - | chr5.1:76467565-76467584 | None:intergenic | 40.0% |
| ! | CTTTCGGTAACCTTTTCTTC+TGG | - | chr5.1:76472396-76472415 | None:intergenic | 40.0% |
| ! | TCTTGCGTTTTATGCTTCAG+TGG | + | chr5.1:76468980-76468999 | MS.gene37949:intron | 40.0% |
| ! | TCTTTTCACTCGAGTCTTCT+AGG | - | chr5.1:76467537-76467556 | None:intergenic | 40.0% |
| ! | TGCAACGGATTCTTTCTTTC+TGG | - | chr5.1:76471630-76471649 | None:intergenic | 40.0% |
| ! | TTTGTCTTTGGAGGAAGACT+TGG | - | chr5.1:76471834-76471853 | None:intergenic | 40.0% |
| !! | AAAAGGCATCAAGGACTGAT+TGG | - | chr5.1:76469969-76469988 | None:intergenic | 40.0% |
| !! | GAAAGTTGATGTTAGGCAAG+AGG | + | chr5.1:76467867-76467886 | MS.gene37949:CDS | 40.0% |
| !! | GATACACTTGTTGTGACTTG+AGG | - | chr5.1:76470099-76470118 | None:intergenic | 40.0% |
| AAAAGTCGAGATGAGGAGGT+GGG | + | chr5.1:76468468-76468487 | MS.gene37949:CDS | 45.0% | |
| AAACAAGGCTCAACAGGATC+TGG | + | chr5.1:76470292-76470311 | MS.gene37949:CDS | 45.0% | |
| AAAGAGGGGAAAGCTGATGA+AGG | + | chr5.1:76467928-76467947 | MS.gene37949:CDS | 45.0% | |
| AACGTCAAGACGATCTGCTA+AGG | + | chr5.1:76470321-76470340 | MS.gene37949:CDS | 45.0% | |
| AAGAGAACGAAGAGAACGAC+AGG | + | chr5.1:76473070-76473089 | MS.gene37949:CDS | 45.0% | |
| AAGAGGGGAAAGCTGATGAA+GGG | + | chr5.1:76467929-76467948 | MS.gene37949:CDS | 45.0% | |
| AAGCCGGAGAAATCTGAAAG+TGG | + | chr5.1:76471548-76471567 | MS.gene37949:CDS | 45.0% | |
| AAGGAAATCAGTTCAGCGGT+TGG | + | chr5.1:76468653-76468672 | MS.gene37949:CDS | 45.0% | |
| AAGGGGGAGAGATAAAAGAG+GGG | + | chr5.1:76467914-76467933 | MS.gene37949:CDS | 45.0% | |
| AGAGAACGAAGAGAACGACA+GGG | + | chr5.1:76473071-76473090 | MS.gene37949:CDS | 45.0% | |
| AGCCGGAGAAATCTGAAAGT+GGG | + | chr5.1:76471549-76471568 | MS.gene37949:CDS | 45.0% | |
| ATCTGCTTGACGTACCAGTT+GGG | + | chr5.1:76469549-76469568 | MS.gene37949:CDS | 45.0% | |
| CAAAGATGAGGGCAGTGAAA+AGG | + | chr5.1:76468248-76468267 | MS.gene37949:CDS | 45.0% | |
| CAAATGTAGCCTGCAAAAGC+GGG | - | chr5.1:76472688-76472707 | None:intergenic | 45.0% | |
| CAATAACAAAACCGGGGATG+GGG | + | chr5.1:76467717-76467736 | MS.gene37949:CDS | 45.0% | |
| CACTGTTCCTGACAAATCCA+AGG | + | chr5.1:76471520-76471539 | MS.gene37949:CDS | 45.0% | |
| CCTTTCCTCTCCTACAAAAG+AGG | - | chr5.1:76469061-76469080 | None:intergenic | 45.0% | |
| CGACTATTATCAGCATTGCC+AGG | - | chr5.1:76469636-76469655 | None:intergenic | 45.0% | |
| CGCAAGCGCATAGAAAAACA+AGG | + | chr5.1:76470743-76470762 | MS.gene37949:CDS | 45.0% | |
| CGTATTCATGCTGTACGCTT+TGG | + | chr5.1:76469654-76469673 | MS.gene37949:intron | 45.0% | |
| CTACTCAAGACGAGTGTATC+TGG | + | chr5.1:76470203-76470222 | MS.gene37949:intron | 45.0% | |
| GAAGCCTGAATTAGATGCCA+TGG | + | chr5.1:76468203-76468222 | MS.gene37949:CDS | 45.0% | |
| GAAGGGGGAGAGATAAAAGA+GGG | + | chr5.1:76467913-76467932 | MS.gene37949:CDS | 45.0% | |
| GAGGATAAGAAAGACGATGC+AGG | + | chr5.1:76467964-76467983 | MS.gene37949:CDS | 45.0% | |
| GCAAATGTAGCCTGCAAAAG+CGG | - | chr5.1:76472689-76472708 | None:intergenic | 45.0% | |
| GGATAAGAAAGACGATGCAG+GGG | + | chr5.1:76467966-76467985 | MS.gene37949:CDS | 45.0% | |
| GGATGGGGAAGGAATAAAAG+AGG | + | chr5.1:76467732-76467751 | MS.gene37949:CDS | 45.0% | |
| GTATTGAAAAAGGGTGGGAG+AGG | + | chr5.1:76468546-76468565 | MS.gene37949:CDS | 45.0% | |
| TCACCCCACCTCTATAGTTA+AGG | + | chr5.1:76469158-76469177 | MS.gene37949:intron | 45.0% | |
| TCCCCACTTTCAGATTTCTC+CGG | - | chr5.1:76471554-76471573 | None:intergenic | 45.0% | |
| TCTACCTGCTTTGTCTTTGG+AGG | - | chr5.1:76471843-76471862 | None:intergenic | 45.0% | |
| TCTTCCTCCAAAGACAAAGC+AGG | + | chr5.1:76471836-76471855 | MS.gene37949:CDS | 45.0% | |
| TGAAGATTCTTCCGTAGCAG+AGG | + | chr5.1:76471418-76471437 | MS.gene37949:CDS | 45.0% | |
| TGAAGGGGGAGAGATAAAAG+AGG | + | chr5.1:76467912-76467931 | MS.gene37949:CDS | 45.0% | |
| TGAGTACGATGCATCTGTCA+AGG | + | chr5.1:76469938-76469957 | MS.gene37949:intron | 45.0% | |
| TGAGTCTGAGGAAGAACAGA+AGG | + | chr5.1:76471469-76471488 | MS.gene37949:CDS | 45.0% | |
| TGATAAGAAAGCTGATGGGG+AGG | + | chr5.1:76467642-76467661 | MS.gene37949:CDS | 45.0% | |
| TGCCCTCATCTTTGCTTTCA+AGG | - | chr5.1:76468242-76468261 | None:intergenic | 45.0% | |
| TGCGTAACTGATCATCACTC+GGG | - | chr5.1:76472446-76472465 | None:intergenic | 45.0% | |
| TGGGGAGGAAGAACTAGAAA+TGG | + | chr5.1:76467657-76467676 | MS.gene37949:CDS | 45.0% | |
| TGGGTCGACAATGGTTTCTT+GGG | - | chr5.1:76471713-76471732 | None:intergenic | 45.0% | |
| TTACTTGAGACGAGCGTTTC+TGG | + | chr5.1:76471139-76471158 | MS.gene37949:intron | 45.0% | |
| TTAGCAGATCGTCTTGACGT+TGG | - | chr5.1:76470322-76470341 | None:intergenic | 45.0% | |
| TTCAGGTAAGCAATTCGACG+TGG | + | chr5.1:76472971-76472990 | MS.gene37949:intron | 45.0% | |
| TTTCACTCGAGTCTTCTAGG+TGG | - | chr5.1:76467534-76467553 | None:intergenic | 45.0% | |
| ! | ATGCTCTCATCTTTGGCTTC+AGG | - | chr5.1:76468438-76468457 | None:intergenic | 45.0% |
| ! | CCTCTTTTGTAGGAGAGGAA+AGG | + | chr5.1:76469058-76469077 | MS.gene37949:CDS | 45.0% |
| ! | TCCGATCATGGTGATAGTGA+TGG | + | chr5.1:76471740-76471759 | MS.gene37949:CDS | 45.0% |
| ! | TCCTTTTCTCTCCTCTGCTA+CGG | - | chr5.1:76471432-76471451 | None:intergenic | 45.0% |
| ! | TGCTCTCATCTTTGGCTTCA+GGG | - | chr5.1:76468437-76468456 | None:intergenic | 45.0% |
| ! | TTTCTCCGGCTTTTCATCCT+TGG | - | chr5.1:76471540-76471559 | None:intergenic | 45.0% |
| ! | TTTTATTCCTTCCCCATCCC+CGG | - | chr5.1:76467731-76467750 | None:intergenic | 45.0% |
| ! | TTTTTCCTCCCTTAGGTTCC+GGG | - | chr5.1:76467564-76467583 | None:intergenic | 45.0% |
| !! | ACATTTGTTGTATGGCAGCC+TGG | + | chr5.1:76469615-76469634 | MS.gene37949:intron | 45.0% |
| !! | ACATTTTCTCCCGCTTTTGC+AGG | + | chr5.1:76472676-76472695 | MS.gene37949:intron | 45.0% |
| !!! | GCCGACATTTTGAAGCTACT+CGG | + | chr5.1:76472707-76472726 | MS.gene37949:CDS | 45.0% |
| AAAGAAGGACCCGGAACCTA+AGG | + | chr5.1:76467552-76467571 | MS.gene37949:CDS | 50.0% | |
| AAAGGGTGGGAGAGGAAATG+TGG | + | chr5.1:76468554-76468573 | MS.gene37949:CDS | 50.0% | |
| AAGAAGGACCCGGAACCTAA+GGG | + | chr5.1:76467553-76467572 | MS.gene37949:CDS | 50.0% | |
| ACCATGATCGGATGCAGAGT+GGG | - | chr5.1:76471732-76471751 | None:intergenic | 50.0% | |
| AGAGGGGAAAGCTGATGAAG+GGG | + | chr5.1:76467930-76467949 | MS.gene37949:CDS | 50.0% | |
| AGCGGGAAAGGAAAGGTTGA+TGG | + | chr5.1:76468363-76468382 | MS.gene37949:CDS | 50.0% | |
| CACGTCAAGACGTTCTGCTA+AGG | + | chr5.1:76471263-76471282 | MS.gene37949:CDS | 50.0% | |
| CTCGAGTGAAAAGAAGGACC+CGG | + | chr5.1:76467543-76467562 | MS.gene37949:CDS | 50.0% | |
| CTTAGCAGAACGTCTTGACG+TGG | - | chr5.1:76471265-76471284 | None:intergenic | 50.0% | |
| GAAAAGTCGAGATGAGGAGG+TGG | + | chr5.1:76468467-76468486 | MS.gene37949:CDS | 50.0% | |
| GAGGACAAGCATGCTGATGA+AGG | + | chr5.1:76467787-76467806 | MS.gene37949:CDS | 50.0% | |
| GATCTGCTTGACGTACCAGT+TGG | + | chr5.1:76469548-76469567 | MS.gene37949:CDS | 50.0% | |
| GCCGGAGAAATCTGAAAGTG+GGG | + | chr5.1:76471550-76471569 | MS.gene37949:CDS | 50.0% | |
| GGAGAAAAGTCGAGATGAGG+AGG | + | chr5.1:76468464-76468483 | MS.gene37949:CDS | 50.0% | |
| GTGGGTCGACAATGGTTTCT+TGG | - | chr5.1:76471714-76471733 | None:intergenic | 50.0% | |
| TCCGTAGCAGAGGAGAGAAA+AGG | + | chr5.1:76471428-76471447 | MS.gene37949:CDS | 50.0% | |
| TCTTTCACTTTGCAGGGTCG+TGG | + | chr5.1:76468792-76468811 | MS.gene37949:intron | 50.0% | |
| TGACACGGAAGATGAGTCTG+AGG | + | chr5.1:76471457-76471476 | MS.gene37949:CDS | 50.0% | |
| TGGGAGAGGAAATGTGGAGA+AGG | + | chr5.1:76468560-76468579 | MS.gene37949:CDS | 50.0% | |
| ! | CGGTTGGTTGTAGGAGTTGT+TGG | - | chr5.1:76468621-76468640 | None:intergenic | 50.0% |
| ! | GCGGGAAAGGAAAGGTTGAT+GGG | + | chr5.1:76468364-76468383 | MS.gene37949:CDS | 50.0% |
| !! | CGGGAAAGGAAAGGTTGATG+GGG | + | chr5.1:76468365-76468384 | MS.gene37949:CDS | 50.0% |
| !! | GGAAGACTTGGTGAGAGTTG+AGG | - | chr5.1:76471822-76471841 | None:intergenic | 50.0% |
| AAAACCACGCTCGGCACGAA+AGG | + | chr5.1:76471682-76471701 | MS.gene37949:CDS | 55.0% | |
| AAACCACGCTCGGCACGAAA+GGG | + | chr5.1:76471683-76471702 | MS.gene37949:CDS | 55.0% | |
| AACAAAACCGGGGATGGGGA+AGG | + | chr5.1:76467721-76467740 | MS.gene37949:CDS | 55.0% | |
| ACCCACTCTGCATCCGATCA+TGG | + | chr5.1:76471728-76471747 | MS.gene37949:CDS | 55.0% | |
| AGATGAGGAGGTGGGCGATA+AGG | + | chr5.1:76468476-76468495 | MS.gene37949:CDS | 55.0% | |
| CACCATGATCGGATGCAGAG+TGG | - | chr5.1:76471733-76471752 | None:intergenic | 55.0% | |
| CCAACCGTCCTGTACGTGAA+AGG | + | chr5.1:76468634-76468653 | MS.gene37949:CDS | 55.0% | |
| CCTTTCACGTACAGGACGGT+TGG | - | chr5.1:76468637-76468656 | None:intergenic | 55.0% | |
| CGTGGATCTCACCCCAAGAA+AGG | + | chr5.1:76472989-76473008 | MS.gene37949:CDS | 55.0% | |
| GAACGACAGGGTAATGCCTG+AGG | + | chr5.1:76473083-76473102 | MS.gene37949:CDS | 55.0% | |
| GATGCAGAGTGGGTCGACAA+TGG | - | chr5.1:76471722-76471741 | None:intergenic | 55.0% | |
| GGAGGTGGGCGATAAGGATA+AGG | + | chr5.1:76468482-76468501 | MS.gene37949:CDS | 55.0% | |
| ! | CGTACAGGACGGTTGGTTGT+AGG | - | chr5.1:76468630-76468649 | None:intergenic | 55.0% |
| AAGGACCCGGAACCTAAGGG+AGG | + | chr5.1:76467556-76467575 | MS.gene37949:CDS | 60.0% | |
| GTTCCCTTTCGTGCCGAGCG+TGG | - | chr5.1:76471689-76471708 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 76467472 | 76473103 | 76467472 | ID=MS.gene37949 |
| chr5.1 | mRNA | 76467472 | 76473103 | 76467472 | ID=MS.gene37949.t1;Parent=MS.gene37949 |
| chr5.1 | exon | 76467472 | 76468722 | 76467472 | ID=MS.gene37949.t1.exon1;Parent=MS.gene37949.t1 |
| chr5.1 | CDS | 76467472 | 76468722 | 76467472 | ID=cds.MS.gene37949.t1;Parent=MS.gene37949.t1 |
| chr5.1 | exon | 76468807 | 76468840 | 76468807 | ID=MS.gene37949.t1.exon2;Parent=MS.gene37949.t1 |
| chr5.1 | CDS | 76468807 | 76468840 | 76468807 | ID=cds.MS.gene37949.t1;Parent=MS.gene37949.t1 |
| chr5.1 | exon | 76469000 | 76469079 | 76469000 | ID=MS.gene37949.t1.exon3;Parent=MS.gene37949.t1 |
| chr5.1 | CDS | 76469000 | 76469079 | 76469000 | ID=cds.MS.gene37949.t1;Parent=MS.gene37949.t1 |
| chr5.1 | exon | 76469303 | 76469362 | 76469303 | ID=MS.gene37949.t1.exon4;Parent=MS.gene37949.t1 |
| chr5.1 | CDS | 76469303 | 76469362 | 76469303 | ID=cds.MS.gene37949.t1;Parent=MS.gene37949.t1 |
| chr5.1 | exon | 76469479 | 76469589 | 76469479 | ID=MS.gene37949.t1.exon5;Parent=MS.gene37949.t1 |
| chr5.1 | CDS | 76469479 | 76469589 | 76469479 | ID=cds.MS.gene37949.t1;Parent=MS.gene37949.t1 |
| chr5.1 | exon | 76470057 | 76470137 | 76470057 | ID=MS.gene37949.t1.exon6;Parent=MS.gene37949.t1 |
| chr5.1 | CDS | 76470057 | 76470137 | 76470057 | ID=cds.MS.gene37949.t1;Parent=MS.gene37949.t1 |
| chr5.1 | exon | 76470265 | 76470342 | 76470265 | ID=MS.gene37949.t1.exon7;Parent=MS.gene37949.t1 |
| chr5.1 | CDS | 76470265 | 76470342 | 76470265 | ID=cds.MS.gene37949.t1;Parent=MS.gene37949.t1 |
| chr5.1 | exon | 76470464 | 76470601 | 76470464 | ID=MS.gene37949.t1.exon8;Parent=MS.gene37949.t1 |
| chr5.1 | CDS | 76470464 | 76470601 | 76470464 | ID=cds.MS.gene37949.t1;Parent=MS.gene37949.t1 |
| chr5.1 | exon | 76470725 | 76470808 | 76470725 | ID=MS.gene37949.t1.exon9;Parent=MS.gene37949.t1 |
| chr5.1 | CDS | 76470725 | 76470808 | 76470725 | ID=cds.MS.gene37949.t1;Parent=MS.gene37949.t1 |
| chr5.1 | exon | 76470946 | 76471077 | 76470946 | ID=MS.gene37949.t1.exon10;Parent=MS.gene37949.t1 |
| chr5.1 | CDS | 76470946 | 76471077 | 76470946 | ID=cds.MS.gene37949.t1;Parent=MS.gene37949.t1 |
| chr5.1 | exon | 76471201 | 76471284 | 76471201 | ID=MS.gene37949.t1.exon11;Parent=MS.gene37949.t1 |
| chr5.1 | CDS | 76471201 | 76471284 | 76471201 | ID=cds.MS.gene37949.t1;Parent=MS.gene37949.t1 |
| chr5.1 | exon | 76471404 | 76471857 | 76471404 | ID=MS.gene37949.t1.exon12;Parent=MS.gene37949.t1 |
| chr5.1 | CDS | 76471404 | 76471857 | 76471404 | ID=cds.MS.gene37949.t1;Parent=MS.gene37949.t1 |
| chr5.1 | exon | 76472397 | 76472506 | 76472397 | ID=MS.gene37949.t1.exon13;Parent=MS.gene37949.t1 |
| chr5.1 | CDS | 76472397 | 76472506 | 76472397 | ID=cds.MS.gene37949.t1;Parent=MS.gene37949.t1 |
| chr5.1 | exon | 76472698 | 76472728 | 76472698 | ID=MS.gene37949.t1.exon14;Parent=MS.gene37949.t1 |
| chr5.1 | CDS | 76472698 | 76472728 | 76472698 | ID=cds.MS.gene37949.t1;Parent=MS.gene37949.t1 |
| chr5.1 | exon | 76472976 | 76473103 | 76472976 | ID=MS.gene37949.t1.exon15;Parent=MS.gene37949.t1 |
| chr5.1 | CDS | 76472976 | 76473103 | 76472976 | ID=cds.MS.gene37949.t1;Parent=MS.gene37949.t1 |
| Gene Sequence |
| Protein sequence |
