AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene37985

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene37985.t1 MTR_5g096390 98.830 684 8 0 1 684 1 684 0.0 1404
MS.gene37985.t1 MTR_1g054935 46.311 637 292 8 57 680 139 738 0.0 572
MS.gene37985.t1 MTR_1g054935 46.780 590 286 4 103 680 3 576 0.0 556
MS.gene37985.t1 MTR_7g106880 44.651 645 309 8 47 679 118 726 0.0 553
MS.gene37985.t1 MTR_1g054960 47.766 582 277 6 107 680 21 583 0.0 551
MS.gene37985.t1 MTR_7g106880 46.350 589 288 6 103 679 3 575 0.0 531
MS.gene37985.t1 MTR_2g079980 43.112 617 318 8 67 680 3 589 4.67e-174 510
MS.gene37985.t1 MTR_5g025470 43.930 626 309 7 64 680 44 636 2.54e-172 507
MS.gene37985.t1 MTR_8g059150 43.949 628 319 9 57 680 28 626 1.09e-168 498
MS.gene37985.t1 MTR_1g093990 42.628 624 332 8 64 680 56 660 1.03e-166 494
MS.gene37985.t1 MTR_1g096580 39.626 641 345 11 64 680 44 666 6.67e-154 461
MS.gene37985.t1 MTR_4g094060 34.552 547 314 19 104 627 68 593 6.26e-72 246
MS.gene37985.t1 MTR_4g094050 34.124 548 315 18 104 627 68 593 4.85e-70 242
MS.gene37985.t1 MTR_4g076970 31.516 587 339 16 72 616 1 566 7.94e-70 241
MS.gene37985.t1 MTR_1g108340 29.422 588 380 9 62 630 40 611 5.74e-69 239
MS.gene37985.t1 MTR_1g108340 29.422 588 380 9 62 630 40 611 6.50e-69 239
MS.gene37985.t1 MTR_8g093840 31.654 635 370 24 83 681 30 636 2.07e-67 233
MS.gene37985.t1 MTR_4g076940 35.491 448 270 10 107 541 51 492 1.40e-65 229
MS.gene37985.t1 MTR_4g076940 35.491 448 270 10 107 541 91 532 1.95e-65 230
MS.gene37985.t1 MTR_7g100120 26.755 755 448 22 11 678 5 741 4.06e-65 229
MS.gene37985.t1 MTR_4g116540 30.835 587 370 15 108 681 74 637 4.75e-65 227
MS.gene37985.t1 MTR_1g115790 30.333 600 370 19 63 626 72 659 7.26e-63 223
MS.gene37985.t1 MTR_4g094090 30.248 605 363 20 100 673 22 598 9.67e-63 220
MS.gene37985.t1 MTR_4g076900 39.275 331 187 6 107 426 27 354 2.00e-62 220
MS.gene37985.t1 MTR_6g066240 32.914 556 320 16 102 628 59 590 1.31e-61 219
MS.gene37985.t1 MTR_4g094010 30.796 565 354 18 94 638 35 582 1.85e-60 215
MS.gene37985.t1 MTR_2g078080 31.667 540 316 17 107 629 48 551 2.15e-60 213
MS.gene37985.t1 MTR_3g096410 30.680 603 368 21 107 681 56 636 2.58e-60 214
MS.gene37985.t1 MTR_3g463680 28.793 646 398 16 61 684 810 1415 2.41e-58 214
MS.gene37985.t1 MTR_3g463680 24.691 567 351 16 108 620 167 711 7.19e-31 130
MS.gene37985.t1 MTR_7g104100 27.603 605 379 17 56 637 836 1404 1.26e-57 212
MS.gene37985.t1 MTR_7g104100 25.654 573 329 22 109 616 182 722 3.39e-31 131
MS.gene37985.t1 MTR_1g094660 32.500 480 285 11 107 555 515 986 6.63e-57 209
MS.gene37985.t1 MTR_7g104150 27.273 616 385 16 36 611 789 1381 1.29e-55 206
MS.gene37985.t1 MTR_7g104150 24.174 575 335 20 109 616 184 724 4.95e-26 115
MS.gene37985.t1 MTR_1g099570 27.970 665 379 26 58 683 3 606 3.15e-55 199
MS.gene37985.t1 MTR_1g050525 27.788 565 361 13 61 611 861 1392 4.35e-55 204
MS.gene37985.t1 MTR_1g050525 24.460 556 357 17 109 616 176 716 1.61e-29 126
MS.gene37985.t1 MTR_1g094660 47.951 244 122 5 107 346 515 757 5.73e-55 202
MS.gene37985.t1 MTR_7g104110 26.656 604 374 15 50 611 797 1373 1.48e-54 203
MS.gene37985.t1 MTR_7g104110 23.227 564 354 14 109 616 178 718 1.66e-29 126
MS.gene37985.t1 MTR_4g054020 31.810 525 305 18 122 627 1 491 1.33e-53 194
MS.gene37985.t1 MTR_5g070320 28.598 542 331 13 109 624 858 1369 2.23e-53 199
MS.gene37985.t1 MTR_5g070320 25.258 582 349 18 108 629 168 723 3.46e-34 140
MS.gene37985.t1 MTR_5g070320 28.598 542 331 13 109 624 667 1178 3.30e-53 199
MS.gene37985.t1 MTR_5g070320 23.933 539 324 19 150 629 21 532 5.26e-23 105
MS.gene37985.t1 MTR_5g070320 28.598 542 331 13 109 624 571 1082 3.59e-53 198
MS.gene37985.t1 MTR_5g070320 23.983 467 304 16 196 637 4 444 8.24e-21 98.2
MS.gene37985.t1 MTR_4g093845 29.603 554 340 16 100 627 50 579 1.27e-52 192
MS.gene37985.t1 MTR_7g098800 27.288 590 391 13 109 684 803 1368 1.83e-52 196
MS.gene37985.t1 MTR_7g098800 24.359 624 387 21 65 627 85 684 3.59e-31 131
MS.gene37985.t1 MTR_7g104130 26.678 596 386 13 50 611 803 1381 7.27e-52 195
MS.gene37985.t1 MTR_7g104130 28.938 273 157 7 109 345 184 455 1.48e-25 113
MS.gene37985.t1 MTR_1g011650 27.872 592 373 18 61 635 844 1398 9.53e-52 194
MS.gene37985.t1 MTR_1g011650 23.633 567 370 16 98 616 155 706 2.12e-27 119
MS.gene37985.t1 MTR_1g492950 27.290 513 339 10 109 606 894 1387 1.40e-51 194
MS.gene37985.t1 MTR_1g492950 31.752 274 148 7 109 345 189 460 7.49e-29 124
MS.gene37985.t1 MTR_4g076940 34.197 386 238 8 167 541 19 399 2.78e-51 188
MS.gene37985.t1 MTR_7g098760 27.091 550 366 12 109 643 880 1409 5.46e-51 192
MS.gene37985.t1 MTR_7g098760 30.986 284 159 8 98 345 151 433 4.37e-29 124
MS.gene37985.t1 MTR_2g101090 27.505 549 330 15 109 625 871 1383 8.61e-51 191
MS.gene37985.t1 MTR_2g101090 24.612 516 280 17 108 563 178 644 8.12e-25 111
MS.gene37985.t1 MTR_8g014360 27.808 543 336 13 109 625 905 1417 9.32e-51 191
MS.gene37985.t1 MTR_8g014360 24.199 562 363 15 108 621 177 723 5.48e-34 140
MS.gene37985.t1 MTR_7g104130 26.724 580 376 12 50 597 803 1365 1.88e-50 190
MS.gene37985.t1 MTR_7g104130 28.938 273 157 7 109 345 184 455 1.78e-25 113
MS.gene37985.t1 MTR_8g107450 42.449 245 137 4 104 345 64 307 4.10e-50 187
MS.gene37985.t1 MTR_5g030910 45.082 244 129 5 103 343 45 286 4.59e-50 186
MS.gene37985.t1 MTR_4g123850 27.211 588 367 15 61 628 826 1372 1.98e-49 187
MS.gene37985.t1 MTR_4g123850 23.732 552 365 14 109 616 168 707 1.22e-30 129
MS.gene37985.t1 MTR_7g098780 26.199 542 351 14 109 628 845 1359 2.52e-49 187
MS.gene37985.t1 MTR_7g098780 28.882 322 192 6 61 345 125 446 1.86e-30 129
MS.gene37985.t1 MTR_7g098750 26.460 548 372 12 109 643 613 1142 9.70e-49 185
MS.gene37985.t1 MTR_7g098750 22.426 437 302 14 211 629 28 445 1.13e-15 81.6
MS.gene37985.t1 MTR_4g113070 28.413 542 340 13 109 628 844 1359 1.78e-48 184
MS.gene37985.t1 MTR_4g113070 24.291 564 350 15 108 616 149 690 3.46e-25 112
MS.gene37985.t1 MTR_7g098750 26.460 548 372 12 109 643 883 1412 1.95e-48 184
MS.gene37985.t1 MTR_7g098750 24.144 584 372 19 98 629 151 715 2.33e-30 129
MS.gene37985.t1 MTR_4g011640 27.440 543 359 13 109 636 863 1385 3.05e-48 184
MS.gene37985.t1 MTR_4g011640 29.589 365 195 13 85 398 146 499 4.78e-32 134
MS.gene37985.t1 MTR_2g102640 27.890 545 358 12 109 638 858 1382 3.07e-48 184
MS.gene37985.t1 MTR_2g102640 25.291 601 382 19 98 648 156 739 4.42e-34 140
MS.gene37985.t1 MTR_2g102660 27.339 545 361 12 109 638 855 1379 5.02e-48 183
MS.gene37985.t1 MTR_2g102660 25.000 600 385 18 98 648 156 739 1.14e-34 142
MS.gene37985.t1 MTR_7g098740 26.545 550 369 12 109 643 841 1370 5.77e-48 183
MS.gene37985.t1 MTR_7g098740 29.836 305 177 8 77 345 130 433 2.27e-30 129
MS.gene37985.t1 MTR_1g011640 26.072 583 376 14 61 625 821 1366 7.98e-48 182
MS.gene37985.t1 MTR_1g011640 30.403 273 153 8 109 345 154 425 5.54e-24 108
MS.gene37985.t1 MTR_7g098370 26.259 556 363 14 109 643 841 1370 9.98e-48 182
MS.gene37985.t1 MTR_7g098370 30.640 297 166 9 85 345 141 433 4.21e-30 127
MS.gene37985.t1 MTR_7g098750 26.923 520 348 12 109 614 883 1384 2.50e-47 181
MS.gene37985.t1 MTR_7g098750 24.144 584 372 19 98 629 151 715 1.57e-30 129
MS.gene37985.t1 MTR_2g102670 27.339 545 361 12 109 638 838 1362 2.64e-47 181
MS.gene37985.t1 MTR_2g102670 23.244 598 380 17 98 648 156 721 4.57e-28 121
MS.gene37985.t1 MTR_7g101780 31.006 487 291 13 105 555 510 987 3.97e-47 180
MS.gene37985.t1 MTR_4g011630 27.656 546 356 16 109 636 866 1390 4.07e-47 180
MS.gene37985.t1 MTR_4g011630 29.756 410 229 13 88 451 152 548 1.81e-32 135
MS.gene37985.t1 MTR_8g014360 30.732 410 254 10 109 506 905 1296 4.49e-47 180
MS.gene37985.t1 MTR_8g014360 24.199 562 363 15 108 621 177 723 9.15e-34 139
MS.gene37985.t1 MTR_1g063920 29.774 487 299 12 105 559 489 964 1.88e-46 178
MS.gene37985.t1 MTR_3g107870 26.541 584 377 14 61 628 857 1404 4.85e-46 177
MS.gene37985.t1 MTR_3g107870 24.956 565 365 17 98 616 155 706 7.89e-34 139
MS.gene37985.t1 MTR_7g098320 26.087 552 371 12 108 643 874 1404 8.18e-46 176
MS.gene37985.t1 MTR_7g098320 30.847 295 167 8 87 345 136 429 1.09e-29 126
MS.gene37985.t1 MTR_4g011620 29.583 480 288 15 109 560 856 1313 1.18e-45 176
MS.gene37985.t1 MTR_4g011620 24.437 577 373 16 100 628 152 713 1.16e-31 132
MS.gene37985.t1 MTR_4g058000 30.550 491 290 11 105 555 503 982 2.99e-45 174
MS.gene37985.t1 MTR_7g098300 26.812 552 361 13 109 643 879 1404 4.43e-45 174
MS.gene37985.t1 MTR_7g098300 31.408 277 153 8 105 345 158 433 6.30e-29 124
MS.gene37985.t1 MTR_3g040670 42.857 245 130 7 129 367 201 441 4.42e-42 159
MS.gene37985.t1 MTR_7g098320 27.913 412 263 10 109 506 875 1266 1.23e-39 157
MS.gene37985.t1 MTR_7g098320 30.847 295 167 8 87 345 136 429 1.71e-29 125
MS.gene37985.t1 MTR_2g095390 25.035 715 428 24 21 678 37 700 1.45e-38 152
MS.gene37985.t1 MTR_7g098890 26.449 552 337 19 108 627 783 1297 6.76e-35 142
MS.gene37985.t1 MTR_7g098890 29.795 292 180 12 61 331 86 373 9.69e-24 107
MS.gene37985.t1 MTR_4g089130 51.923 104 39 1 224 327 1 93 9.27e-27 105
MS.gene37985.t1 MTR_7g407080 22.727 506 312 15 125 609 128 575 4.69e-25 110
MS.gene37985.t1 MTR_8g103450 29.066 289 157 10 8 291 162 407 2.95e-23 103
MS.gene37985.t1 MTR_1567s0010 31.282 195 121 6 117 308 250 434 3.26e-20 94.4
MS.gene37985.t1 MTR_7g060570 30.932 236 118 7 119 350 938 1132 9.44e-19 91.7
MS.gene37985.t1 MTR_7g091350 53.750 80 37 0 232 311 81 160 3.08e-17 80.1
MS.gene37985.t1 MTR_4g109720 31.754 211 131 9 109 314 404 606 5.18e-17 85.5
MS.gene37985.t1 MTR_7g079540 30.435 230 130 8 107 314 98 319 7.94e-17 82.8
MS.gene37985.t1 MTR_3g086430 29.310 232 146 8 107 328 1016 1239 9.22e-17 85.5
MS.gene37985.t1 MTR_7g033710 30.357 224 126 11 109 318 442 649 1.14e-16 84.3
MS.gene37985.t1 MTR_5g075955 30.660 212 135 7 107 314 367 570 8.29e-16 81.6
MS.gene37985.t1 MTR_5g075960 30.660 212 135 7 107 314 481 684 8.45e-16 81.6
MS.gene37985.t1 MTR_5g075955 30.660 212 135 7 107 314 479 682 1.10e-15 81.3
MS.gene37985.t1 MTR_3g093430 30.201 298 176 15 107 393 379 655 2.17e-15 80.9
MS.gene37985.t1 MTR_8g022270 26.645 304 189 11 109 399 615 897 1.73e-14 78.2
MS.gene37985.t1 MTR_8g022270 30.093 216 138 8 108 319 1258 1464 3.53e-12 70.5
MS.gene37985.t1 MTR_7g079540 30.144 209 117 7 107 293 98 299 1.88e-14 75.1
MS.gene37985.t1 MTR_7g102070 32.039 206 126 8 109 309 443 639 3.01e-14 77.4
MS.gene37985.t1 MTR_6g009080 29.245 212 134 7 108 309 229 434 3.27e-14 75.9
MS.gene37985.t1 MTR_1g059830 31.507 219 122 9 103 308 390 593 5.14e-14 75.9
MS.gene37985.t1 MTR_6g008820 29.384 211 136 7 109 314 806 1008 6.90e-14 75.9
MS.gene37985.t1 MTR_6g008820 29.384 211 136 7 109 314 1020 1222 7.97e-14 75.9
MS.gene37985.t1 MTR_6g008820 28.378 222 147 7 109 326 366 579 9.99e-11 65.9
MS.gene37985.t1 MTR_6g008820 29.384 211 136 7 109 314 890 1092 8.29e-14 75.9
MS.gene37985.t1 MTR_6g008820 29.384 211 136 7 109 314 698 900 8.36e-14 75.5
MS.gene37985.t1 MTR_6g008820 28.378 222 147 7 109 326 44 257 9.49e-11 65.9
MS.gene37985.t1 MTR_1g025560 31.771 192 117 7 108 293 1010 1193 2.58e-13 74.3
MS.gene37985.t1 MTR_1g063170 32.039 206 126 9 109 309 416 612 3.23e-13 73.9
MS.gene37985.t1 MTR_6g008800 28.436 211 135 7 109 309 1024 1228 3.57e-13 73.6
MS.gene37985.t1 MTR_6g008800 30.890 191 118 7 109 293 378 560 2.63e-11 67.8
MS.gene37985.t1 MTR_4g108153 28.646 192 126 5 101 289 582 765 4.00e-13 73.6
MS.gene37985.t1 MTR_5g033080 26.364 220 141 8 109 318 298 506 4.51e-13 72.8
MS.gene37985.t1 MTR_5g029750 29.310 232 146 10 74 293 330 555 4.99e-13 73.2
MS.gene37985.t1 MTR_5g029750 29.048 210 137 8 109 314 1006 1207 1.18e-11 68.9
MS.gene37985.t1 MTR_5g033080 26.364 220 141 8 109 318 473 681 5.61e-13 72.8
MS.gene37985.t1 MTR_6g009150 28.910 211 134 7 109 309 1034 1238 6.18e-13 72.8
MS.gene37985.t1 MTR_6g009150 30.049 203 129 7 98 293 365 561 1.32e-11 68.6
MS.gene37985.t1 MTR_3g107800 28.750 240 151 9 109 338 413 642 8.79e-13 72.4
MS.gene37985.t1 MTR_6g009200 29.245 212 136 7 109 314 1037 1240 1.01e-12 72.4
MS.gene37985.t1 MTR_6g009200 31.461 178 112 6 120 293 389 560 4.15e-11 67.0
MS.gene37985.t1 MTR_6g009030 28.910 211 134 7 109 309 1016 1220 1.25e-12 72.0
MS.gene37985.t1 MTR_6g009030 30.526 190 122 6 108 293 377 560 1.84e-11 68.2
MS.gene37985.t1 MTR_4g108163 28.272 191 126 5 102 289 613 795 1.94e-12 71.2
MS.gene37985.t1 MTR_6g009070 27.459 244 157 10 109 342 951 1184 2.30e-12 71.2
MS.gene37985.t1 MTR_6g009070 29.412 221 140 7 83 293 286 500 2.61e-11 67.8
MS.gene37985.t1 MTR_4g108170 27.723 202 134 6 120 318 628 820 3.59e-12 70.5
MS.gene37985.t1 MTR_6g009110 29.864 221 139 8 83 293 353 567 3.70e-12 70.5
MS.gene37985.t1 MTR_6g009110 28.302 212 138 7 109 314 1035 1238 7.20e-12 69.7
MS.gene37985.t1 MTR_6g009090 32.044 181 112 7 118 293 401 575 4.13e-12 69.7
MS.gene37985.t1 MTR_1309s0010 27.419 248 153 9 71 309 408 637 4.26e-12 69.7
MS.gene37985.t1 MTR_4g081190 29.897 194 120 8 107 293 1005 1189 4.98e-12 70.1
MS.gene37985.t1 MTR_4g108240 27.225 191 128 5 102 289 625 807 1.13e-11 68.6
MS.gene37985.t1 MTR_3g099990 28.495 186 116 6 110 289 545 719 1.19e-11 68.6
MS.gene37985.t1 MTR_4g124050 31.604 212 129 8 109 314 413 614 1.64e-11 68.2
MS.gene37985.t1 MTR_7g091380 30.201 149 94 3 120 266 583 723 1.72e-11 68.6
MS.gene37985.t1 MTR_7g091380 30.201 149 94 3 120 266 381 521 1.74e-11 68.6
MS.gene37985.t1 MTR_4g124050 31.604 212 129 8 109 314 413 614 1.87e-11 68.2
MS.gene37985.t1 MTR_4g124050 30.000 210 121 10 98 293 1053 1250 9.31e-11 65.9
MS.gene37985.t1 MTR_7g091380 30.201 149 94 3 120 266 583 723 1.99e-11 68.2
MS.gene37985.t1 MTR_7g091380 30.201 149 94 3 120 266 401 541 2.07e-11 68.2
MS.gene37985.t1 MTR_4g123990 29.245 212 134 8 109 314 395 596 4.85e-11 67.0
MS.gene37985.t1 MTR_3g080220 29.018 224 141 8 107 320 410 625 4.90e-11 67.0
MS.gene37985.t1 MTR_4g108240 26.842 190 128 5 101 287 624 805 7.44e-11 65.9
MS.gene37985.t1 MTR_3g437990 28.108 185 118 5 110 289 545 719 8.85e-11 65.9
MS.gene37985.t1 MTR_6g011680 28.571 189 125 6 109 293 1025 1207 9.07e-11 65.9
MS.gene37985.t1 MTR_1g099280 24.490 245 161 10 67 308 595 818 9.59e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene37985.t1 AT3G13220 72.605 668 176 5 23 684 16 682 0.0 1002
MS.gene37985.t1 AT5G06530 43.578 654 305 8 47 680 137 746 0.0 558
MS.gene37985.t1 AT5G06530 43.578 654 305 8 47 680 137 746 0.0 558
MS.gene37985.t1 AT1G31770 44.677 620 315 7 64 680 50 644 4.81e-176 517
MS.gene37985.t1 AT5G06530 44.768 583 274 7 47 609 137 691 9.38e-175 515
MS.gene37985.t1 AT3G25620 43.109 624 329 8 64 679 65 670 3.52e-166 493
MS.gene37985.t1 AT4G27420 40.611 655 350 8 41 680 1 631 1.19e-163 485
MS.gene37985.t1 AT5G06530 46.230 504 243 5 126 609 1 496 3.88e-160 471
MS.gene37985.t1 AT1G71960 38.923 650 359 12 53 680 26 659 5.78e-149 448
MS.gene37985.t1 AT3G25620 44.794 413 203 7 64 468 65 460 3.31e-109 338
MS.gene37985.t1 AT2G01320 30.810 568 370 10 70 627 51 605 3.69e-79 265
MS.gene37985.t1 AT2G01320 30.810 568 370 10 70 627 51 605 3.69e-79 265
MS.gene37985.t1 AT2G01320 30.810 568 370 10 70 627 51 605 1.48e-78 265
MS.gene37985.t1 AT2G01320 30.810 568 370 10 70 627 51 605 1.48e-78 265
MS.gene37985.t1 AT2G01320 30.810 568 370 10 70 627 51 605 1.79e-78 265
MS.gene37985.t1 AT2G01320 30.810 568 370 10 70 627 51 605 1.83e-78 265
MS.gene37985.t1 AT2G13610 32.051 624 384 17 77 679 32 636 2.76e-75 255
MS.gene37985.t1 AT2G01320 31.743 482 308 9 70 543 51 519 4.24e-70 238
MS.gene37985.t1 AT2G01320 31.743 482 308 9 70 543 51 519 4.24e-70 238
MS.gene37985.t1 AT3G21090 31.260 611 357 18 107 679 43 628 1.11e-66 233
MS.gene37985.t1 AT2G37360 27.393 679 402 16 64 678 95 746 3.83e-65 229
MS.gene37985.t1 AT3G53510 28.549 634 364 15 107 678 124 730 1.47e-62 222
MS.gene37985.t1 AT3G55100 28.047 681 403 18 50 678 8 653 1.02e-61 218
MS.gene37985.t1 AT3G55100 28.047 681 403 18 50 678 8 653 1.02e-61 218
MS.gene37985.t1 AT3G55110 30.127 551 348 13 107 637 89 622 2.05e-61 218
MS.gene37985.t1 AT3G55130 28.921 695 370 24 62 678 68 716 2.21e-61 218
MS.gene37985.t1 AT1G51500 30.629 604 339 19 50 616 1 561 5.86e-61 217
MS.gene37985.t1 AT3G53480 28.905 557 357 11 103 642 871 1405 6.46e-60 219
MS.gene37985.t1 AT3G53480 24.370 595 339 22 85 609 165 718 5.89e-29 124
MS.gene37985.t1 AT1G51460 31.319 546 321 12 107 616 28 555 7.19e-60 213
MS.gene37985.t1 AT3G55090 30.052 579 347 17 104 646 102 658 1.29e-59 214
MS.gene37985.t1 AT2G39350 30.179 560 334 14 105 626 105 645 8.19e-59 211
MS.gene37985.t1 AT4G25750 29.125 594 352 20 109 683 30 573 1.14e-58 208
MS.gene37985.t1 AT1G17840 31.362 558 324 15 103 628 63 593 1.40e-58 210
MS.gene37985.t1 AT1G53270 31.203 532 323 14 107 628 48 546 4.83e-58 206
MS.gene37985.t1 AT1G59870 29.530 596 372 17 61 642 861 1422 2.36e-57 211
MS.gene37985.t1 AT1G59870 25.512 635 368 20 108 673 185 783 3.93e-37 150
MS.gene37985.t1 AT4G15230 29.433 547 352 13 97 628 814 1341 3.07e-57 211
MS.gene37985.t1 AT4G15230 31.502 273 150 7 109 345 156 427 4.57e-32 134
MS.gene37985.t1 AT4G15230 29.433 547 352 13 97 628 814 1341 3.07e-57 211
MS.gene37985.t1 AT4G15230 31.502 273 150 7 109 345 156 427 4.57e-32 134
MS.gene37985.t1 AT4G15230 29.616 547 351 13 97 628 735 1262 3.72e-57 211
MS.gene37985.t1 AT4G15230 31.502 273 150 7 109 345 77 348 4.26e-32 134
MS.gene37985.t1 AT5G13580 30.128 624 360 20 42 628 49 633 1.31e-56 205
MS.gene37985.t1 AT3G16340 29.554 538 338 10 109 628 841 1355 2.15e-56 208
MS.gene37985.t1 AT3G16340 25.755 563 351 18 108 620 161 706 6.10e-32 134
MS.gene37985.t1 AT2G37010 30.065 612 359 19 105 678 496 1076 2.19e-56 208
MS.gene37985.t1 AT2G37010 30.065 612 359 19 105 678 496 1076 2.19e-56 208
MS.gene37985.t1 AT3G16340 29.554 538 338 10 109 628 836 1350 2.27e-56 208
MS.gene37985.t1 AT3G16340 25.267 562 350 17 108 620 161 701 3.41e-30 128
MS.gene37985.t1 AT4G15233 27.121 601 382 12 42 628 713 1271 5.03e-56 207
MS.gene37985.t1 AT4G15233 29.651 344 196 12 42 345 27 364 9.46e-31 130
MS.gene37985.t1 AT4G15233 27.121 601 382 12 42 628 713 1271 5.03e-56 207
MS.gene37985.t1 AT4G15233 29.651 344 196 12 42 345 27 364 9.46e-31 130
MS.gene37985.t1 AT2G37280 26.799 556 374 11 103 644 834 1370 5.22e-56 207
MS.gene37985.t1 AT2G37280 24.248 565 344 18 100 606 145 683 2.07e-32 135
MS.gene37985.t1 AT4G15233 27.121 601 382 12 42 628 757 1315 5.36e-56 207
MS.gene37985.t1 AT4G15233 30.675 326 198 11 42 345 89 408 1.42e-32 135
MS.gene37985.t1 AT2G29940 30.754 517 324 12 109 610 853 1350 6.15e-56 207
MS.gene37985.t1 AT2G29940 25.303 577 355 18 108 629 174 729 1.80e-33 138
MS.gene37985.t1 AT4G15233 27.121 601 382 12 42 628 775 1333 6.16e-56 207
MS.gene37985.t1 AT4G15233 29.651 344 196 12 42 345 89 426 1.19e-30 129
MS.gene37985.t1 AT2G37280 26.619 556 375 10 103 644 863 1399 6.55e-56 207
MS.gene37985.t1 AT2G37280 22.824 609 357 18 85 606 130 712 7.57e-29 124
MS.gene37985.t1 AT2G37280 26.619 556 375 10 103 644 676 1212 6.88e-56 207
MS.gene37985.t1 AT2G37280 23.889 540 327 18 125 606 12 525 3.67e-28 121
MS.gene37985.t1 AT4G15233 27.121 601 382 12 42 628 766 1324 7.04e-56 207
MS.gene37985.t1 AT4G15233 28.488 344 191 13 42 345 89 417 2.12e-26 116
MS.gene37985.t1 AT4G15236 27.121 601 382 12 42 628 773 1331 9.85e-56 206
MS.gene37985.t1 AT4G15236 24.801 629 396 21 43 616 86 692 1.29e-33 139
MS.gene37985.t1 AT1G66950 27.807 579 378 12 42 606 821 1373 4.92e-55 204
MS.gene37985.t1 AT1G66950 23.273 666 419 20 71 673 152 788 4.23e-31 131
MS.gene37985.t1 AT3G30842 26.758 583 377 14 61 628 815 1362 4.93e-55 204
MS.gene37985.t1 AT3G30842 24.463 605 384 22 67 615 113 700 3.69e-34 140
MS.gene37985.t1 AT1G15210 28.014 589 362 17 61 628 834 1381 2.10e-54 202
MS.gene37985.t1 AT1G15210 23.975 634 383 19 44 620 137 728 3.21e-33 137
MS.gene37985.t1 AT2G36380 27.853 517 341 10 109 611 879 1377 3.08e-54 202
MS.gene37985.t1 AT2G36380 23.664 655 438 16 71 677 150 790 4.52e-35 143
MS.gene37985.t1 AT4G15233 26.635 627 376 15 42 628 775 1357 1.44e-53 200
MS.gene37985.t1 AT4G15233 29.825 342 194 12 42 343 89 424 1.23e-30 129
MS.gene37985.t1 AT5G52860 28.264 605 341 21 109 683 44 585 4.56e-53 193
MS.gene37985.t1 AT2G26910 27.768 587 392 10 109 681 845 1413 8.10e-53 197
MS.gene37985.t1 AT2G26910 25.040 619 376 20 65 616 93 690 5.58e-31 130
MS.gene37985.t1 AT4G15215 30.364 550 343 14 97 628 801 1328 1.42e-52 197
MS.gene37985.t1 AT4G15215 29.781 319 178 8 65 345 104 414 1.30e-32 135
MS.gene37985.t1 AT4G15215 30.364 550 343 14 97 628 801 1328 1.42e-52 197
MS.gene37985.t1 AT4G15215 29.781 319 178 8 65 345 104 414 1.30e-32 135
MS.gene37985.t1 AT4G15215 30.364 550 343 14 97 628 801 1328 1.42e-52 197
MS.gene37985.t1 AT4G15215 29.781 319 178 8 65 345 104 414 1.30e-32 135
MS.gene37985.t1 AT4G15215 30.364 550 343 14 97 628 801 1328 1.42e-52 197
MS.gene37985.t1 AT4G15215 29.781 319 178 8 65 345 104 414 1.30e-32 135
MS.gene37985.t1 AT4G15215 30.364 550 343 14 97 628 804 1331 1.58e-52 197
MS.gene37985.t1 AT4G15215 29.781 319 178 8 65 345 107 417 1.21e-32 135
MS.gene37985.t1 AT4G15215 30.364 550 343 14 97 628 811 1338 1.58e-52 197
MS.gene37985.t1 AT4G15215 30.938 320 180 9 65 345 107 424 1.04e-34 142
MS.gene37985.t1 AT4G15215 30.364 550 343 14 97 628 808 1335 1.67e-52 197
MS.gene37985.t1 AT4G15215 30.938 320 180 9 65 345 104 421 1.11e-34 142
MS.gene37985.t1 AT4G15215 30.364 550 343 14 97 628 808 1335 1.67e-52 197
MS.gene37985.t1 AT4G15215 30.938 320 180 9 65 345 104 421 1.11e-34 142
MS.gene37985.t1 AT4G15215 30.364 550 343 14 97 628 808 1335 1.67e-52 197
MS.gene37985.t1 AT4G15215 30.938 320 180 9 65 345 104 421 1.11e-34 142
MS.gene37985.t1 AT4G15215 30.364 550 343 14 97 628 808 1335 1.67e-52 197
MS.gene37985.t1 AT4G15215 30.938 320 180 9 65 345 104 421 1.11e-34 142
MS.gene37985.t1 AT4G15215 30.364 550 343 14 97 628 808 1335 1.67e-52 197
MS.gene37985.t1 AT4G15215 30.938 320 180 9 65 345 104 421 1.11e-34 142
MS.gene37985.t1 AT4G15230 29.094 519 334 12 97 602 814 1311 2.57e-52 196
MS.gene37985.t1 AT4G15230 31.502 273 150 7 109 345 156 427 7.92e-32 133
MS.gene37985.t1 AT4G15233 28.096 541 354 13 103 628 670 1190 4.36e-52 195
MS.gene37985.t1 AT4G15233 30.675 326 198 11 42 345 27 346 1.18e-32 135
MS.gene37985.t1 AT4G15233 28.096 541 354 13 103 628 670 1190 4.36e-52 195
MS.gene37985.t1 AT4G15233 30.675 326 198 11 42 345 27 346 1.18e-32 135
MS.gene37985.t1 AT2G37280 27.680 513 336 11 103 602 834 1324 6.05e-52 195
MS.gene37985.t1 AT2G37280 24.248 565 344 18 100 606 145 683 2.42e-32 135
MS.gene37985.t1 AT1G15520 27.903 534 352 11 109 628 852 1366 1.06e-51 194
MS.gene37985.t1 AT1G15520 25.212 591 357 20 96 627 156 720 2.79e-34 141
MS.gene37985.t1 AT5G19410 29.118 601 358 22 105 681 62 618 1.75e-51 189
MS.gene37985.t1 AT5G19410 29.118 601 358 22 105 681 71 627 2.10e-51 189
MS.gene37985.t1 AT1G53390 31.064 470 281 10 107 543 521 980 1.83e-50 190
MS.gene37985.t1 AT5G60740 31.818 484 295 10 105 555 511 992 5.11e-48 183
MS.gene37985.t1 AT1G15520 28.979 421 269 9 109 517 852 1254 1.85e-44 172
MS.gene37985.t1 AT1G15520 25.212 591 357 20 96 627 156 720 2.05e-34 141
MS.gene37985.t1 AT2G28070 25.741 641 428 17 61 679 94 708 8.26e-42 162
MS.gene37985.t1 AT2G28070 25.741 641 428 17 61 679 94 708 8.26e-42 162
MS.gene37985.t1 AT5G39040 33.333 204 125 6 109 308 413 609 2.71e-17 86.7
MS.gene37985.t1 AT1G65410 30.435 230 130 8 107 314 97 318 6.02e-17 83.2
MS.gene37985.t1 AT3G47750 26.160 237 150 8 87 308 602 828 3.79e-15 80.1
MS.gene37985.t1 AT4G28620 30.660 212 135 8 107 314 452 655 7.75e-15 78.6
MS.gene37985.t1 AT5G58270 29.717 212 137 7 107 314 492 695 1.38e-14 78.2
MS.gene37985.t1 AT4G25960 30.516 213 124 9 116 318 425 623 2.55e-14 77.4
MS.gene37985.t1 AT4G25960 31.188 202 127 8 120 317 1058 1251 3.83e-11 67.4
MS.gene37985.t1 AT3G47790 24.434 221 155 5 101 318 598 809 5.53e-14 76.3
MS.gene37985.t1 AT1G70610 26.638 229 129 7 109 318 291 499 1.08e-13 74.7
MS.gene37985.t1 AT1G70610 26.638 229 129 7 109 318 472 680 1.23e-13 74.7
MS.gene37985.t1 AT5G61700 25.000 228 148 6 77 289 572 791 1.30e-13 75.1
MS.gene37985.t1 AT5G61700 25.000 228 148 6 77 289 572 791 1.30e-13 75.1
MS.gene37985.t1 AT3G28390 29.365 252 156 10 77 315 959 1201 1.38e-13 75.1
MS.gene37985.t1 AT3G28390 29.952 207 131 9 120 321 375 572 5.63e-13 73.2
MS.gene37985.t1 AT5G61690 29.319 191 107 8 110 289 548 721 1.93e-13 74.7
MS.gene37985.t1 AT3G47730 28.796 191 109 7 110 289 547 721 2.50e-13 74.3
MS.gene37985.t1 AT3G28415 30.332 211 135 8 109 314 1001 1204 2.63e-13 74.3
MS.gene37985.t1 AT3G28415 31.579 209 131 8 117 321 371 571 1.74e-12 71.6
MS.gene37985.t1 AT1G10680 32.086 187 105 8 117 293 386 560 2.93e-13 73.9
MS.gene37985.t1 AT3G28415 30.332 211 135 8 109 314 993 1196 3.12e-13 73.9
MS.gene37985.t1 AT3G28415 31.579 209 131 8 117 321 363 563 1.98e-12 71.2
MS.gene37985.t1 AT1G27940 28.505 214 141 7 109 318 807 1012 3.14e-13 73.9
MS.gene37985.t1 AT1G27940 31.250 208 123 11 109 308 174 369 1.93e-12 71.2
MS.gene37985.t1 AT5G61730 30.481 187 111 7 110 289 549 723 3.16e-13 73.9
MS.gene37985.t1 AT5G61730 30.481 187 111 7 110 289 539 713 3.26e-13 73.9
MS.gene37985.t1 AT1G10680 32.086 187 105 8 117 293 386 560 3.31e-13 73.9
MS.gene37985.t1 AT1G10680 30.653 199 126 7 120 314 1010 1200 3.33e-11 67.4
MS.gene37985.t1 AT1G27940 28.505 214 141 7 109 318 1021 1226 3.72e-13 73.6
MS.gene37985.t1 AT1G27940 31.250 208 123 11 109 308 388 583 2.10e-12 71.2
MS.gene37985.t1 AT3G47790 24.000 225 155 5 75 296 572 783 3.83e-13 73.6
MS.gene37985.t1 AT3G47790 24.000 225 155 5 75 296 453 664 4.24e-13 73.2
MS.gene37985.t1 AT5G61690 28.272 191 110 7 110 289 548 722 4.39e-13 73.6
MS.gene37985.t1 AT5G61740 26.877 253 167 9 70 318 538 776 4.71e-13 73.2
MS.gene37985.t1 AT5G61740 26.877 253 167 9 70 318 572 810 4.89e-13 73.2
MS.gene37985.t1 AT5G61740 26.877 253 167 9 70 318 433 671 5.00e-13 73.2
MS.gene37985.t1 AT3G28345 32.778 180 107 7 120 293 387 558 6.00e-13 73.2
MS.gene37985.t1 AT3G28345 30.357 224 144 7 109 324 1012 1231 1.01e-11 68.9
MS.gene37985.t1 AT4G28630 28.774 212 139 8 107 314 450 653 6.76e-13 72.4
MS.gene37985.t1 AT1G28010 30.435 207 126 10 109 308 389 584 1.07e-12 72.4
MS.gene37985.t1 AT1G28010 28.972 214 140 8 109 318 1023 1228 2.21e-12 71.2
MS.gene37985.t1 AT3G28380 31.280 211 133 8 108 314 375 577 1.95e-12 71.2
MS.gene37985.t1 AT3G28380 30.000 220 134 10 117 324 1020 1231 6.03e-11 66.6
MS.gene37985.t1 AT3G47770 26.190 210 143 6 102 308 597 797 2.90e-12 70.9
MS.gene37985.t1 AT2G36910 30.583 206 129 8 109 309 385 581 3.00e-12 70.9
MS.gene37985.t1 AT3G47740 24.153 236 156 7 87 308 597 823 4.08e-12 70.1
MS.gene37985.t1 AT3G47770 26.190 210 143 6 102 308 623 823 4.29e-12 70.1
MS.gene37985.t1 AT3G62150 28.302 212 136 7 109 314 420 621 8.05e-12 69.3
MS.gene37985.t1 AT3G62150 28.302 212 136 7 109 314 420 621 8.05e-12 69.3
MS.gene37985.t1 AT3G62150 28.302 212 136 7 109 314 420 621 8.05e-12 69.3
MS.gene37985.t1 AT2G41700 25.641 195 129 7 101 289 1423 1607 1.72e-11 68.6
MS.gene37985.t1 AT2G41700 26.180 233 147 9 41 266 434 648 2.59e-11 67.8
MS.gene37985.t1 AT2G41700 25.641 195 129 7 101 289 1465 1649 1.82e-11 68.6
MS.gene37985.t1 AT2G41700 26.180 233 147 9 41 266 504 718 2.98e-11 67.8
MS.gene37985.t1 AT5G46540 28.571 217 129 9 109 314 374 575 4.67e-11 67.0
MS.gene37985.t1 AT5G46540 32.934 167 80 6 116 266 1029 1179 9.33e-11 65.9

Find 136 sgRNAs with CRISPR-Local

Find 233 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTCTATATTTGCATATTT+TGG 0.093588 5.1:+76840738 MS.gene37985:CDS
GGCTCTTTGCTTTCGGTTCT+TGG 0.111838 5.1:+76841765 MS.gene37985:CDS
GAAGGCTCTCCTGTTTATTA+TGG 0.192438 5.1:+76839980 MS.gene37985:CDS
CGGCGAAATTCTTGCTTTGA+TGG 0.209208 5.1:+76839137 MS.gene37985:CDS
GCTGGATTCATTGGTATTTC+CGG 0.213071 5.1:-76840049 None:intergenic
CTTATGTTATTCCTTCTTAC+AGG 0.228543 5.1:+76841175 MS.gene37985:CDS
TTTGACATCATTGTCTTTAC+AGG 0.238405 5.1:-76839036 None:intergenic
ACTAGCCATTCAGGTTAAAA+AGG 0.251681 5.1:+76840356 MS.gene37985:CDS
CATGCTTATTGTGTACTTCA+TGG 0.253005 5.1:+76840916 MS.gene37985:CDS
CTTCTAAAAGTGCAATATTC+AGG 0.260030 5.1:+76841625 MS.gene37985:CDS
TGCTAGACACACACCTTTCT+AGG 0.276132 5.1:-76839522 None:intergenic
CATTCATGTACTATGGATTC+AGG 0.279268 5.1:+76841599 MS.gene37985:CDS
CCCTTCAGTGGCGATTATTA+AGG 0.290816 5.1:+76840156 MS.gene37985:CDS
CTGGATTCATTGGTATTTCC+GGG 0.294967 5.1:-76840048 None:intergenic
ACATCTTCAACTAGCCATTC+AGG 0.311236 5.1:+76840347 MS.gene37985:CDS
AAGGTGGCTTAAGTGAAGTT+TGG 0.323854 5.1:+76841728 MS.gene37985:CDS
CTTGCTTTGATGGGTCCTTC+TGG 0.338717 5.1:+76839147 MS.gene37985:CDS
CGCTTTCACATTCATATAGT+TGG 0.341387 5.1:-76841651 None:intergenic
CTTGGAATCGCACTTCTGTT+AGG 0.342551 5.1:+76840480 MS.gene37985:CDS
TGATCTTCTCTGCATTCTTA+AGG 0.348445 5.1:+76839434 MS.gene37985:CDS
TACATGTCATTCATGTACTA+TGG 0.353628 5.1:+76841592 MS.gene37985:CDS
TTCTTGCTTGACTTGGCAAC+TGG 0.354225 5.1:+76840076 MS.gene37985:CDS
TCTTATAAAGAATGGTGAAT+TGG 0.356972 5.1:-76840401 None:intergenic
TAGCCATGGCTCTTTGCTTT+CGG 0.358126 5.1:+76841758 MS.gene37985:CDS
AAGAATTCTGCTGGATTCAT+TGG 0.359339 5.1:-76840058 None:intergenic
TTCACTACCTTGAGATATAC+AGG 0.361221 5.1:-76838457 None:intergenic
AAACTTCTTCTCACTCTTCA+AGG 0.370422 5.1:+76839786 MS.gene37985:CDS
AGCAGAATTCTTGCTTGACT+TGG 0.376774 5.1:+76840069 MS.gene37985:CDS
GTTGGTTCCATGCAGATTGC+AGG 0.381171 5.1:+76838325 MS.gene37985:CDS
AAGGCTCTCCTGTTTATTAT+GGG 0.387461 5.1:+76839981 MS.gene37985:CDS
ATGGCTAGTTGAAGATGTTT+TGG 0.391195 5.1:-76840342 None:intergenic
GGATATCTCAAAGGAATATC+AGG 0.392776 5.1:+76839660 MS.gene37985:CDS
AATCAAGTATAAAGACATAT+TGG 0.393540 5.1:+76840278 MS.gene37985:CDS
ATGCAGATTGCAGGAAGCTT+TGG 0.396748 5.1:+76838334 MS.gene37985:CDS
CACTTCTGTTAGGGCTACTT+TGG 0.403727 5.1:+76840490 MS.gene37985:CDS
ACAACCTTGTTAAGAGTTGT+AGG 0.411458 5.1:+76839180 MS.gene37985:CDS
CTACTTGATGAGCCAACTTC+AGG 0.414761 5.1:+76839741 MS.gene37985:CDS
TTCAACCATTGCATGAACTT+TGG 0.419064 5.1:-76841568 None:intergenic
CTAGCCTTCCCATAATAAAC+AGG 0.420381 5.1:-76839989 None:intergenic
CTTATTGTGTACTTCATGGC+TGG 0.423664 5.1:+76840920 MS.gene37985:CDS
TTGAGATTGGTTCAAGCACT+TGG 0.426645 5.1:+76840462 MS.gene37985:CDS
GGCGAAATTCTTGCTTTGAT+GGG 0.427925 5.1:+76839138 MS.gene37985:CDS
TTTCTTCAACTGTAAGTTGT+GGG 0.436204 5.1:-76839408 None:intergenic
TTCTGTTAGGGCTACTTTGG+TGG 0.436835 5.1:+76840493 MS.gene37985:CDS
TTGGAATCGCACTTCTGTTA+GGG 0.448153 5.1:+76840481 MS.gene37985:CDS
GAGAATACTATCAAGGATCT+AGG 0.450601 5.1:+76839499 MS.gene37985:CDS
TTGATGGGTCCTTCTGGTAG+TGG 0.455405 5.1:+76839153 MS.gene37985:CDS
CTCAGGCATACCTTCACAAT+AGG 0.457158 5.1:+76838377 MS.gene37985:CDS
TTCATCCTTGAGGTTCGTCC+CGG 0.463028 5.1:+76840030 MS.gene37985:CDS
TCGGAGTTGAGCCTCTGTAT+TGG 0.465444 5.1:-76840526 None:intergenic
AAGAAGTTTGTTTGCTGAGG+TGG 0.466943 5.1:-76839772 None:intergenic
AGATTACTTGATAATGTAAA+GGG 0.470567 5.1:+76839207 MS.gene37985:CDS
AACATATAGAGCAAGATTCA+AGG 0.476898 5.1:+76840425 MS.gene37985:CDS
CATCAAAGCAAGAATTTCGC+CGG 0.479651 5.1:-76839136 None:intergenic
AAGATTACTTGATAATGTAA+AGG 0.483097 5.1:+76839206 MS.gene37985:CDS
ATATGTTCTCTTATAAAGAA+TGG 0.484237 5.1:-76840409 None:intergenic
TCATCTTTCAAAATATCTTG+TGG 0.484681 5.1:-76840121 None:intergenic
TTTGATACTGTAAACTTGAA+AGG 0.485964 5.1:+76841709 MS.gene37985:CDS
GTATGTCTTTCCATTTGAAA+AGG 0.488472 5.1:+76840787 MS.gene37985:CDS
AAGTCAAGCAAGAATTCTGC+TGG 0.490022 5.1:-76840067 None:intergenic
AAGAATTTCATAGCCTATGC+TGG 0.493518 5.1:-76839700 None:intergenic
CAGCATAGAATTCATGTCTC+AGG 0.499450 5.1:+76838360 MS.gene37985:CDS
AGAGATTGACATTCGAGTTG+AGG 0.503993 5.1:+76838405 MS.gene37985:CDS
AAGTTTACAGTATCAAATGA+AGG 0.505100 5.1:-76841703 None:intergenic
ACCTTAATAATCGCCACTGA+AGG 0.506675 5.1:-76840157 None:intergenic
ATCAAAGCAAGAATTTCGCC+GGG 0.507268 5.1:-76839135 None:intergenic
AAGGGTATCACAGGAAGCAT+TGG 0.509325 5.1:+76839111 MS.gene37985:CDS
AGAGGCTCAACTCCGAGATC+AGG 0.509457 5.1:+76840533 MS.gene37985:CDS
AAAAGGAATGGACAGTGAGT+TGG 0.514587 5.1:+76840373 MS.gene37985:CDS
AAACATGTTAAAGATTCTGC+TGG 0.514747 5.1:-76839936 None:intergenic
AAGGAATATCAGGAGGAGAA+AGG 0.516071 5.1:+76839670 MS.gene37985:CDS
TCTTGCTTGCTCATGTTGGT+TGG 0.518009 5.1:-76839460 None:intergenic
GTTTCTTCAACTGTAAGTTG+TGG 0.518691 5.1:-76839409 None:intergenic
GTGAAAGCGAAGGAGGGTGC+AGG 0.519396 5.1:+76841665 MS.gene37985:CDS
TACAGGTGGCTACTATGTCC+AGG 0.524500 5.1:+76841192 MS.gene37985:CDS
CTCTCCTGTTTATTATGGGA+AGG 0.524723 5.1:+76839985 MS.gene37985:CDS
GAGCATTCAAAGAGCAGGAA+TGG 0.530777 5.1:+76841138 MS.gene37985:CDS
TAAAGATTCTGCTGGATGGC+TGG 0.531941 5.1:-76839928 None:intergenic
TCAAGGATCTAGGCCTAGAA+AGG 0.537892 5.1:+76839509 MS.gene37985:CDS
ACAATAAGCATGAAAACAGT+AGG 0.539684 5.1:-76840905 None:intergenic
CATAGTAGCCACCTGTAAGA+AGG 0.541861 5.1:-76841186 None:intergenic
ATAGTCCTGCTCTTAAAAGA+AGG 0.544365 5.1:+76839256 MS.gene37985:CDS
TCAATGTCACCTCCATCTGT+TGG 0.548912 5.1:+76838307 MS.gene37985:CDS
ATCACAGGAAGCATTGGCCC+CGG 0.551823 5.1:+76839117 MS.gene37985:CDS
AAGAGTTGAGAATACTATCA+AGG 0.555684 5.1:+76839492 MS.gene37985:CDS
CCCTCTCCCTGTATATCTCA+AGG 0.560435 5.1:+76838450 MS.gene37985:CDS
ACCTTGAGATATACAGGGAG+AGG 0.561482 5.1:-76838451 None:intergenic
AGGTATACTTGAGAAAAGAA+AGG 0.561504 5.1:+76840807 MS.gene37985:CDS
TAGTAGTAAGTACCTGATCT+CGG 0.563130 5.1:-76840545 None:intergenic
TGTGAGAGAGGATGAGATTG+AGG 0.565020 5.1:+76838276 MS.gene37985:CDS
ATGTTATTCCTTCTTACAGG+TGG 0.566372 5.1:+76841178 MS.gene37985:CDS
CACTCTTCAAGGACTAGCAA+AGG 0.570159 5.1:+76839797 MS.gene37985:CDS
AAAGCTTCCTGCAATCTGCA+TGG 0.573772 5.1:-76838332 None:intergenic
GATACTGTAAACTTGAAAGG+TGG 0.577773 5.1:+76841712 MS.gene37985:CDS
TTGACATCATTGTCTTTACA+GGG 0.580586 5.1:-76839035 None:intergenic
GTTATGAGCATTCAAAGAGC+AGG 0.582016 5.1:+76841133 MS.gene37985:CDS
CCTTAATAATCGCCACTGAA+GGG 0.583592 5.1:-76840156 None:intergenic
GTGGAATCAAGACCTGAAGT+TGG 0.587104 5.1:-76839753 None:intergenic
TATGAATGTGAAAGCGAAGG+AGG 0.588398 5.1:+76841658 MS.gene37985:CDS
TGTAAAGACAATGATGTCAA+AGG 0.589535 5.1:+76839038 MS.gene37985:CDS
GCAAAACTGAAAATAACGTA+AGG 0.589831 5.1:-76840970 None:intergenic
TCATCAAGTAGTAGCAGTGA+AGG 0.590913 5.1:-76839729 None:intergenic
AAACTTCTTCTGATATCAGA+AGG 0.594489 5.1:+76839962 MS.gene37985:CDS
GAACCGAAAGCAAAGAGCCA+TGG 0.598115 5.1:-76841761 None:intergenic
TTGAGATATACAGGGAGAGG+GGG 0.598614 5.1:-76838448 None:intergenic
GAGAAGAAGTTTGTTTGCTG+AGG 0.599548 5.1:-76839775 None:intergenic
AATCGCCACTGAAGGGTCAG+TGG 0.601040 5.1:-76840149 None:intergenic
ATCTGCATGGAACCAACAGA+TGG 0.603528 5.1:-76838319 None:intergenic
TCCTCCTACAACTCTTAACA+AGG 0.606674 5.1:-76839184 None:intergenic
GATTGGATTTGTAACACAAG+AGG 0.611572 5.1:+76839375 MS.gene37985:CDS
ATGTTAAAGATTCTGCTGGA+TGG 0.613207 5.1:-76839932 None:intergenic
GAAAGGAAGAGAACCAGCAT+AGG 0.618520 5.1:+76839687 MS.gene37985:CDS
CCTTGAGATATACAGGGAGA+GGG 0.624583 5.1:-76838450 None:intergenic
TATTTCCGGGACGAACCTCA+AGG 0.628989 5.1:-76840035 None:intergenic
TGGAGGTGACATTGACATGT+TGG 0.632035 5.1:-76838299 None:intergenic
TGCATGGAACCAACAGATGG+AGG 0.632283 5.1:-76838316 None:intergenic
ATAGGTGGAGGATATCTCAA+AGG 0.633463 5.1:+76839651 MS.gene37985:CDS
CTTGAGATATACAGGGAGAG+GGG 0.634657 5.1:-76838449 None:intergenic
CTATATGAATGTGAAAGCGA+AGG 0.635438 5.1:+76841655 MS.gene37985:CDS
TGAGATATACAGGGAGAGGG+GGG 0.642073 5.1:-76838447 None:intergenic
ATGAATGTGAAAGCGAAGGA+GGG 0.644388 5.1:+76841659 MS.gene37985:CDS
ACATACCAAAGTTCATGCAA+TGG 0.644730 5.1:+76841563 MS.gene37985:CDS
GTTGTCTTTCCACTACCAGA+AGG 0.648172 5.1:-76839162 None:intergenic
AGAATCCACTGACCCTTCAG+TGG 0.654429 5.1:+76840144 MS.gene37985:CDS
TCTCTGAATACCTATTGTGA+AGG 0.657985 5.1:-76838387 None:intergenic
GATCATGGAAAATGTGAGAG+AGG 0.658226 5.1:+76838264 None:intergenic
AGTTTGGATTCTGATAGCCA+TGG 0.658413 5.1:+76841744 MS.gene37985:CDS
ACCTTGTTAAGAGTTGTAGG+AGG 0.662670 5.1:+76839183 MS.gene37985:CDS
TCACTACCTTGAGATATACA+GGG 0.676242 5.1:-76838456 None:intergenic
TATCTCAAAGGAATATCAGG+AGG 0.686148 5.1:+76839663 MS.gene37985:CDS
GAAATCTTCAACCAATACAG+AGG 0.691223 5.1:+76840515 MS.gene37985:CDS
CAGCACTCTATGTGACATGG+TGG 0.711905 5.1:+76840868 MS.gene37985:CDS
AAGCAGCACTCTATGTGACA+TGG 0.726541 5.1:+76840865 MS.gene37985:CDS
GGCTGGCTTTAAGAGCACTG+CGG 0.755321 5.1:+76840937 MS.gene37985:CDS
TCAAAGCAAGAATTTCGCCG+GGG 0.774276 5.1:-76839134 None:intergenic
TGGGAAGGCTAGAGACACAG+CGG 0.774897 5.1:+76840000 MS.gene37985:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAATAGTCATAATATT+TGG - chr5.1:76841470-76841489 None:intergenic 10.0%
!! AAAACTGAATTATACAAATT+AGG + chr5.1:76841415-76841434 MS.gene37985:intron 15.0%
!! GTTAATCGTAATTTATTTAT+AGG + chr5.1:76840183-76840202 MS.gene37985:intron 15.0%
!!! AAATACAAGACAATTTTAAA+GGG + chr5.1:76839093-76839112 MS.gene37985:CDS 15.0%
!!! ATATTTTGATATATTGAGAT+TGG + chr5.1:76840449-76840468 MS.gene37985:CDS 15.0%
!! AATAGTCATAATATTTGGTT+TGG - chr5.1:76841465-76841484 None:intergenic 20.0%
!! AATCAAGTATAAAGACATAT+TGG + chr5.1:76840278-76840297 MS.gene37985:CDS 20.0%
!! ATATGTTCTCTTATAAAGAA+TGG - chr5.1:76840412-76840431 None:intergenic 20.0%
!! TATTAACAACAAAAACAACA+GGG - chr5.1:76841085-76841104 None:intergenic 20.0%
!! TGTTAAATTAGATAAATCTG+AGG + chr5.1:76838652-76838671 MS.gene37985:intron 20.0%
!! TTAAAGTTTAAAGAAAAGCA+TGG - chr5.1:76838625-76838644 None:intergenic 20.0%
!!! AAATCATTTTGAATGCTAAA+AGG - chr5.1:76838817-76838836 None:intergenic 20.0%
!!! AAGATTACTTGATAATGTAA+AGG + chr5.1:76839206-76839225 MS.gene37985:CDS 20.0%
!!! AGATTACTTGATAATGTAAA+GGG + chr5.1:76839207-76839226 MS.gene37985:CDS 20.0%
!!! ATTTGTTATTTTCTTCTACA+TGG - chr5.1:76839077-76839096 None:intergenic 20.0%
!!! CAAATACAAGACAATTTTAA+AGG + chr5.1:76839092-76839111 MS.gene37985:CDS 20.0%
!!! GTTTTATGTAAAGATAGTTT+TGG - chr5.1:76841400-76841419 None:intergenic 20.0%
!!! TAATGTCATTTAAGTACTTA+CGG - chr5.1:76838758-76838777 None:intergenic 20.0%
!!! TGTTCTATATTTGCATATTT+TGG + chr5.1:76840738-76840757 MS.gene37985:CDS 20.0%
!!! TGTTGTTTTTGTTGTTAATA+GGG + chr5.1:76841085-76841104 MS.gene37985:intron 20.0%
! AAGTTTACAGTATCAAATGA+AGG - chr5.1:76841706-76841725 None:intergenic 25.0%
! ATCAAAACAAATATAAGTGC+AGG - chr5.1:76838783-76838802 None:intergenic 25.0%
! CATTATGAACAAAACAATGT+CGG - chr5.1:76838897-76838916 None:intergenic 25.0%
! CTATTAACAACAAAAACAAC+AGG - chr5.1:76841086-76841105 None:intergenic 25.0%
! GAGATGAATCTTTAACATTT+CGG - chr5.1:76841342-76841361 None:intergenic 25.0%
! GGTTGTACAAAAGATTATTT+AGG - chr5.1:76839611-76839630 None:intergenic 25.0%
! GTTAAGAATATATCTGAATC+TGG - chr5.1:76838705-76838724 None:intergenic 25.0%
! GTTAGTTAAACATATCTTTG+TGG + chr5.1:76841246-76841265 MS.gene37985:intron 25.0%
! TAGCATTCAAAATGATTTGA+TGG + chr5.1:76838819-76838838 MS.gene37985:intron 25.0%
! TCATCTTTCAAAATATCTTG+TGG - chr5.1:76840124-76840143 None:intergenic 25.0%
! TCTTATAAAGAATGGTGAAT+TGG - chr5.1:76840404-76840423 None:intergenic 25.0%
! TTTGATACTGTAAACTTGAA+AGG + chr5.1:76841709-76841728 MS.gene37985:CDS 25.0%
!! TGATTCTCTTCTTTTTCTTT+TGG - chr5.1:76840306-76840325 None:intergenic 25.0%
!!! ATGTAAAGATAGTTTTGGTT+TGG - chr5.1:76841395-76841414 None:intergenic 25.0%
!!! CTGTTGTTTTTGTTGTTAAT+AGG + chr5.1:76841084-76841103 MS.gene37985:intron 25.0%
!!! GTTGTTTTTGTTGTTAATAG+GGG + chr5.1:76841086-76841105 MS.gene37985:intron 25.0%
!!! GTTTTTAAGTATCGTCTTTT+TGG - chr5.1:76841520-76841539 None:intergenic 25.0%
!!! TTGTTTTTGTTGTTAATAGG+GGG + chr5.1:76841087-76841106 MS.gene37985:intron 25.0%
AAACATGTTAAAGATTCTGC+TGG - chr5.1:76839939-76839958 None:intergenic 30.0%
AAACTTCTTCTGATATCAGA+AGG + chr5.1:76839962-76839981 MS.gene37985:CDS 30.0%
AACACTCAGAACATGTTAAA+GGG + chr5.1:76841025-76841044 MS.gene37985:intron 30.0%
AACATATAGAGCAAGATTCA+AGG + chr5.1:76840425-76840444 MS.gene37985:CDS 30.0%
AAGAGTTGAGAATACTATCA+AGG + chr5.1:76839492-76839511 MS.gene37985:CDS 30.0%
ACAATAAGCATGAAAACAGT+AGG - chr5.1:76840908-76840927 None:intergenic 30.0%
AGGTATACTTGAGAAAAGAA+AGG + chr5.1:76840807-76840826 MS.gene37985:CDS 30.0%
ATACTTAACCGTTACAAGTT+TGG + chr5.1:76841306-76841325 MS.gene37985:intron 30.0%
ATTCAGTTTCCAATATCAAG+TGG - chr5.1:76838849-76838868 None:intergenic 30.0%
CTTATGTTATTCCTTCTTAC+AGG + chr5.1:76841175-76841194 MS.gene37985:CDS 30.0%
GAAAAAGAAGAGAATCATAG+AGG + chr5.1:76840309-76840328 MS.gene37985:CDS 30.0%
GATCTGAACAATTTAAGTCA+TGG + chr5.1:76840584-76840603 MS.gene37985:intron 30.0%
GCAAAACTGAAAATAACGTA+AGG - chr5.1:76840973-76840992 None:intergenic 30.0%
GTATGTCTTTCCATTTGAAA+AGG + chr5.1:76840787-76840806 MS.gene37985:CDS 30.0%
TACATGTCATTCATGTACTA+TGG + chr5.1:76841592-76841611 MS.gene37985:CDS 30.0%
TGAACAATTTAAGTCATGGA+GGG + chr5.1:76840588-76840607 MS.gene37985:intron 30.0%
TGTAAAGACAATGATGTCAA+AGG + chr5.1:76839038-76839057 MS.gene37985:CDS 30.0%
TGTAACGGTTAAGTATAGTT+TGG - chr5.1:76841302-76841321 None:intergenic 30.0%
TGTTACAAATCCAATCCTAT+AGG - chr5.1:76839371-76839390 None:intergenic 30.0%
TTGACATCATTGTCTTTACA+GGG - chr5.1:76839038-76839057 None:intergenic 30.0%
TTTCTTCAACTGTAAGTTGT+GGG - chr5.1:76839411-76839430 None:intergenic 30.0%
TTTGACATCATTGTCTTTAC+AGG - chr5.1:76839039-76839058 None:intergenic 30.0%
! AAGTTTAAAGAAAAGCATGG+AGG - chr5.1:76838622-76838641 None:intergenic 30.0%
! AATACTTTTGAATTGCCCTT+AGG + chr5.1:76839877-76839896 MS.gene37985:intron 30.0%
! AGTAACCATTGACTAATTTC+TGG + chr5.1:76840700-76840719 MS.gene37985:intron 30.0%
! CAGTTTTACCAAACTTGTAA+CGG - chr5.1:76841317-76841336 None:intergenic 30.0%
! CTCAAGTATACCTTTTCAAA+TGG - chr5.1:76840800-76840819 None:intergenic 30.0%
! CTTCTAAAAGTGCAATATTC+AGG + chr5.1:76841625-76841644 MS.gene37985:CDS 30.0%
! TGGACATCTTCATGTATTTT+TGG + chr5.1:76840758-76840777 MS.gene37985:CDS 30.0%
! TTTTATGCTACCTATAGGAT+TGG + chr5.1:76839358-76839377 MS.gene37985:intron 30.0%
!! TTTAACCTTCTTTTAAGAGC+AGG - chr5.1:76839264-76839283 None:intergenic 30.0%
!!! AAAGATAGTTTTGGTTTGGT+AGG - chr5.1:76841391-76841410 None:intergenic 30.0%
!!! ACAATTTTAAAGGGTATCAC+AGG + chr5.1:76839102-76839121 MS.gene37985:CDS 30.0%
!!! GGTTTGAGTCATCTTATTTT+TGG - chr5.1:76838588-76838607 None:intergenic 30.0%
AAACTTCTTCTCACTCTTCA+AGG + chr5.1:76839786-76839805 MS.gene37985:CDS 35.0%
AACAATTTAAGTCATGGAGG+GGG + chr5.1:76840590-76840609 MS.gene37985:intron 35.0%
AAGAATTCTGCTGGATTCAT+TGG - chr5.1:76840061-76840080 None:intergenic 35.0%
AAGAATTTCATAGCCTATGC+TGG - chr5.1:76839703-76839722 None:intergenic 35.0%
AAGGCTCTCCTGTTTATTAT+GGG + chr5.1:76839981-76840000 MS.gene37985:CDS 35.0%
ACAACCTTGTTAAGAGTTGT+AGG + chr5.1:76839180-76839199 MS.gene37985:CDS 35.0%
ACATACCAAAGTTCATGCAA+TGG + chr5.1:76841563-76841582 MS.gene37985:CDS 35.0%
ACTTACTACTAGGTAGTTTC+AGG + chr5.1:76840557-76840576 MS.gene37985:intron 35.0%
AGGCATTACTATCACATACA+TGG + chr5.1:76840203-76840222 MS.gene37985:intron 35.0%
ATAGTCCTGCTCTTAAAAGA+AGG + chr5.1:76839256-76839275 MS.gene37985:CDS 35.0%
ATGACTCAAACCCTTACTTT+AGG + chr5.1:76838596-76838615 MS.gene37985:intron 35.0%
ATGTTAAAGATTCTGCTGGA+TGG - chr5.1:76839935-76839954 None:intergenic 35.0%
ATGTTATTCCTTCTTACAGG+TGG + chr5.1:76841178-76841197 MS.gene37985:CDS 35.0%
ATTATAGTTCTTCCAGCCTA+AGG - chr5.1:76839896-76839915 None:intergenic 35.0%
CAACACTCAGAACATGTTAA+AGG + chr5.1:76841024-76841043 MS.gene37985:intron 35.0%
CATGCTTATTGTGTACTTCA+TGG + chr5.1:76840916-76840935 MS.gene37985:CDS 35.0%
CATTCATGTACTATGGATTC+AGG + chr5.1:76841599-76841618 MS.gene37985:CDS 35.0%
CGCTTTCACATTCATATAGT+TGG - chr5.1:76841654-76841673 None:intergenic 35.0%
CTATATGAATGTGAAAGCGA+AGG + chr5.1:76841655-76841674 MS.gene37985:CDS 35.0%
CTGAACAATTTAAGTCATGG+AGG + chr5.1:76840587-76840606 MS.gene37985:intron 35.0%
CTGCAAGACAAATCAATTCA+AGG - chr5.1:76841542-76841561 None:intergenic 35.0%
CTTACTACTAGGTAGTTTCA+GGG + chr5.1:76840558-76840577 MS.gene37985:intron 35.0%
GAAATCTTCAACCAATACAG+AGG + chr5.1:76840515-76840534 MS.gene37985:CDS 35.0%
GAACAATTTAAGTCATGGAG+GGG + chr5.1:76840589-76840608 MS.gene37985:intron 35.0%
GAGAATACTATCAAGGATCT+AGG + chr5.1:76839499-76839518 MS.gene37985:CDS 35.0%
GATACTGTAAACTTGAAAGG+TGG + chr5.1:76841712-76841731 MS.gene37985:CDS 35.0%
GATTGGATTTGTAACACAAG+AGG + chr5.1:76839375-76839394 MS.gene37985:CDS 35.0%
GGATATCTCAAAGGAATATC+AGG + chr5.1:76839660-76839679 MS.gene37985:CDS 35.0%
GTTTCTTCAACTGTAAGTTG+TGG - chr5.1:76839412-76839431 None:intergenic 35.0%
TAAAGATTCATCTCGAACCT+AGG + chr5.1:76841348-76841367 MS.gene37985:intron 35.0%
TAGTAGTAAGTACCTGATCT+CGG - chr5.1:76840548-76840567 None:intergenic 35.0%
TATCTCAAAGGAATATCAGG+AGG + chr5.1:76839663-76839682 MS.gene37985:CDS 35.0%
TCACTACCTTGAGATATACA+GGG - chr5.1:76838459-76838478 None:intergenic 35.0%
TCTCTGAATACCTATTGTGA+AGG - chr5.1:76838390-76838409 None:intergenic 35.0%
TGATCTTCTCTGCATTCTTA+AGG + chr5.1:76839434-76839453 MS.gene37985:CDS 35.0%
TTATAGTTCTTCCAGCCTAA+GGG - chr5.1:76839895-76839914 None:intergenic 35.0%
TTCAACCATTGCATGAACTT+TGG - chr5.1:76841571-76841590 None:intergenic 35.0%
TTCACTACCTTGAGATATAC+AGG - chr5.1:76838460-76838479 None:intergenic 35.0%
TTCTCTTAGCTCGAGAATTA+AGG + chr5.1:76838524-76838543 MS.gene37985:intron 35.0%
! ACTAGCCATTCAGGTTAAAA+AGG + chr5.1:76840356-76840375 MS.gene37985:CDS 35.0%
! CATTGTCTTTACAGGGTTTT+TGG - chr5.1:76839031-76839050 None:intergenic 35.0%
! CCATTCAGGTTAAAAAGGAA+TGG + chr5.1:76840361-76840380 MS.gene37985:CDS 35.0%
! CCATTCCTTTTTAACCTGAA+TGG - chr5.1:76840364-76840383 None:intergenic 35.0%
! CTCTCTTTTATGCTACCTAT+AGG + chr5.1:76839353-76839372 MS.gene37985:intron 35.0%
! TTTTTCTTGCTTGCTCATGT+TGG - chr5.1:76839467-76839486 None:intergenic 35.0%
!! ATGGCTAGTTGAAGATGTTT+TGG - chr5.1:76840345-76840364 None:intergenic 35.0%
!! CTTTTAAGAGCAGGACTATA+TGG - chr5.1:76839255-76839274 None:intergenic 35.0%
AAAAGGAATGGACAGTGAGT+TGG + chr5.1:76840373-76840392 MS.gene37985:CDS 40.0%
AAGGAATATCAGGAGGAGAA+AGG + chr5.1:76839670-76839689 MS.gene37985:CDS 40.0%
AAGGTGGCTTAAGTGAAGTT+TGG + chr5.1:76841728-76841747 MS.gene37985:CDS 40.0%
AAGTCAAGCAAGAATTCTGC+TGG - chr5.1:76840070-76840089 None:intergenic 40.0%
ACATCTTCAACTAGCCATTC+AGG + chr5.1:76840347-76840366 MS.gene37985:CDS 40.0%
ACCTTAATAATCGCCACTGA+AGG - chr5.1:76840160-76840179 None:intergenic 40.0%
ACCTTGTTAAGAGTTGTAGG+AGG + chr5.1:76839183-76839202 MS.gene37985:CDS 40.0%
AGATGTCGCCACACAAAAAT+AGG + chr5.1:76839633-76839652 MS.gene37985:intron 40.0%
AGCAGAATTCTTGCTTGACT+TGG + chr5.1:76840069-76840088 MS.gene37985:CDS 40.0%
AGTTTGGATTCTGATAGCCA+TGG + chr5.1:76841744-76841763 MS.gene37985:CDS 40.0%
ATAGGTGGAGGATATCTCAA+AGG + chr5.1:76839651-76839670 MS.gene37985:CDS 40.0%
ATCAAAGCAAGAATTTCGCC+GGG - chr5.1:76839138-76839157 None:intergenic 40.0%
ATGAATGTGAAAGCGAAGGA+GGG + chr5.1:76841659-76841678 MS.gene37985:CDS 40.0%
CAGCATAGAATTCATGTCTC+AGG + chr5.1:76838360-76838379 MS.gene37985:CDS 40.0%
CAGTGGCGATTATTAAGGTA+GGG + chr5.1:76840161-76840180 MS.gene37985:intron 40.0%
CATCAAAGCAAGAATTTCGC+CGG - chr5.1:76839139-76839158 None:intergenic 40.0%
CCTTAATAATCGCCACTGAA+GGG - chr5.1:76840159-76840178 None:intergenic 40.0%
CTCTCCTGTTTATTATGGGA+AGG + chr5.1:76839985-76840004 MS.gene37985:CDS 40.0%
CTGCACCAGAAATTAGTCAA+TGG - chr5.1:76840708-76840727 None:intergenic 40.0%
CTGGATTCATTGGTATTTCC+GGG - chr5.1:76840051-76840070 None:intergenic 40.0%
CTTATTGTGTACTTCATGGC+TGG + chr5.1:76840920-76840939 MS.gene37985:CDS 40.0%
GAAGGCTCTCCTGTTTATTA+TGG + chr5.1:76839980-76839999 MS.gene37985:CDS 40.0%
GAGATCAGGTACTTACTACT+AGG + chr5.1:76840547-76840566 MS.gene37985:intron 40.0%
GATGGATGACCACTTGATAT+TGG + chr5.1:76838837-76838856 MS.gene37985:intron 40.0%
GCTGGATTCATTGGTATTTC+CGG - chr5.1:76840052-76840071 None:intergenic 40.0%
GGCGAAATTCTTGCTTTGAT+GGG + chr5.1:76839138-76839157 MS.gene37985:CDS 40.0%
GTTATGAGCATTCAAAGAGC+AGG + chr5.1:76841133-76841152 MS.gene37985:CDS 40.0%
GTTTGGTAGGAAAACTGAAC+TGG - chr5.1:76841378-76841397 None:intergenic 40.0%
TATGAATGTGAAAGCGAAGG+AGG + chr5.1:76841658-76841677 MS.gene37985:CDS 40.0%
TCAGTGGCGATTATTAAGGT+AGG + chr5.1:76840160-76840179 MS.gene37985:intron 40.0%
TCATCAAGTAGTAGCAGTGA+AGG - chr5.1:76839732-76839751 None:intergenic 40.0%
TCCTCCTACAACTCTTAACA+AGG - chr5.1:76839187-76839206 None:intergenic 40.0%
TTGGAATCGCACTTCTGTTA+GGG + chr5.1:76840481-76840500 MS.gene37985:CDS 40.0%
! AAGAAGTTTGTTTGCTGAGG+TGG - chr5.1:76839775-76839794 None:intergenic 40.0%
! CTAGCCTTCCCATAATAAAC+AGG - chr5.1:76839992-76840011 None:intergenic 40.0%
! GAGAAGAAGTTTGTTTGCTG+AGG - chr5.1:76839778-76839797 None:intergenic 40.0%
! TTCATCGCTCGGATTAGAAT+GGG + chr5.1:76841273-76841292 MS.gene37985:intron 40.0%
! TTGAGATTGGTTCAAGCACT+TGG + chr5.1:76840462-76840481 MS.gene37985:CDS 40.0%
! TTTTTGTGTGGCGACATCTA+TGG - chr5.1:76839632-76839651 None:intergenic 40.0%
!! AGAGATTGACATTCGAGTTG+AGG + chr5.1:76838405-76838424 MS.gene37985:CDS 40.0%
!! CATTGACTAATTTCTGGTGC+AGG + chr5.1:76840706-76840725 MS.gene37985:intron 40.0%
!!! ATCCTCCACCTATTTTTGTG+TGG - chr5.1:76839644-76839663 None:intergenic 40.0%
!!! TTTTGTTGTTAATAGGGGGC+AGG + chr5.1:76841091-76841110 MS.gene37985:intron 40.0%
AAAACTGAACTGGTGCACCT+AGG - chr5.1:76841368-76841387 None:intergenic 45.0%
AAAGCTTCCTGCAATCTGCA+TGG - chr5.1:76838335-76838354 None:intergenic 45.0%
AAGCAGCACTCTATGTGACA+TGG + chr5.1:76840865-76840884 MS.gene37985:CDS 45.0%
AAGCATGGAGGCCTAAAGTA+AGG - chr5.1:76838610-76838629 None:intergenic 45.0%
ACCTTGAGATATACAGGGAG+AGG - chr5.1:76838454-76838473 None:intergenic 45.0%
AGCATGGAGGCCTAAAGTAA+GGG - chr5.1:76838609-76838628 None:intergenic 45.0%
ATCTGCATGGAACCAACAGA+TGG - chr5.1:76838322-76838341 None:intergenic 45.0%
ATGCAGATTGCAGGAAGCTT+TGG + chr5.1:76838334-76838353 MS.gene37985:CDS 45.0%
CAATAGAGTCGAGTGTCTTC+AGG + chr5.1:76838556-76838575 MS.gene37985:intron 45.0%
CACTTCTGTTAGGGCTACTT+TGG + chr5.1:76840490-76840509 MS.gene37985:CDS 45.0%
CATAGTAGCCACCTGTAAGA+AGG - chr5.1:76841189-76841208 None:intergenic 45.0%
CCCTTCAGTGGCGATTATTA+AGG + chr5.1:76840156-76840175 MS.gene37985:CDS 45.0%
CCTTGAGATATACAGGGAGA+GGG - chr5.1:76838453-76838472 None:intergenic 45.0%
CGGCGAAATTCTTGCTTTGA+TGG + chr5.1:76839137-76839156 MS.gene37985:CDS 45.0%
CTACTAGGTAGTTTCAGGGA+CGG + chr5.1:76840562-76840581 MS.gene37985:intron 45.0%
CTACTTGATGAGCCAACTTC+AGG + chr5.1:76839741-76839760 MS.gene37985:CDS 45.0%
CTCAGGCATACCTTCACAAT+AGG + chr5.1:76838377-76838396 MS.gene37985:CDS 45.0%
CTTGAGATATACAGGGAGAG+GGG - chr5.1:76838452-76838471 None:intergenic 45.0%
CTTGGAATCGCACTTCTGTT+AGG + chr5.1:76840480-76840499 MS.gene37985:CDS 45.0%
GAAAGGAAGAGAACCAGCAT+AGG + chr5.1:76839687-76839706 MS.gene37985:CDS 45.0%
GAGCATTCAAAGAGCAGGAA+TGG + chr5.1:76841138-76841157 MS.gene37985:CDS 45.0%
GCTACTTCTTTGTGCATACC+TGG - chr5.1:76841213-76841232 None:intergenic 45.0%
GTGGAATCAAGACCTGAAGT+TGG - chr5.1:76839756-76839775 None:intergenic 45.0%
GTTGTCTTTCCACTACCAGA+AGG - chr5.1:76839165-76839184 None:intergenic 45.0%
TAAAGATTCTGCTGGATGGC+TGG - chr5.1:76839931-76839950 None:intergenic 45.0%
TAGCCATGGCTCTTTGCTTT+CGG + chr5.1:76841758-76841777 MS.gene37985:CDS 45.0%
TCAAAGCAAGAATTTCGCCG+GGG - chr5.1:76839137-76839156 None:intergenic 45.0%
TCAAGGATCTAGGCCTAGAA+AGG + chr5.1:76839509-76839528 MS.gene37985:CDS 45.0%
TCAATGTCACCTCCATCTGT+TGG + chr5.1:76838307-76838326 MS.gene37985:CDS 45.0%
TCTTGCTTGCTCATGTTGGT+TGG - chr5.1:76839463-76839482 None:intergenic 45.0%
TGCTAGACACACACCTTTCT+AGG - chr5.1:76839525-76839544 None:intergenic 45.0%
TGGAGGTGACATTGACATGT+TGG - chr5.1:76838302-76838321 None:intergenic 45.0%
TGTCGCCACACAAAAATAGG+TGG + chr5.1:76839636-76839655 MS.gene37985:CDS 45.0%
TGTGAGAGAGGATGAGATTG+AGG + chr5.1:76838276-76838295 MS.gene37985:CDS 45.0%
TTGAGATATACAGGGAGAGG+GGG - chr5.1:76838451-76838470 None:intergenic 45.0%
! AGAAAGGTGTGTGTCTAGCA+TGG + chr5.1:76839525-76839544 MS.gene37985:intron 45.0%
! CACTCTTCAAGGACTAGCAA+AGG + chr5.1:76839797-76839816 MS.gene37985:CDS 45.0%
! CTTTTGAATTGCCCTTAGGC+TGG + chr5.1:76839881-76839900 MS.gene37985:intron 45.0%
! GTTCATCGCTCGGATTAGAA+TGG + chr5.1:76841272-76841291 MS.gene37985:intron 45.0%
! TTCTGTTAGGGCTACTTTGG+TGG + chr5.1:76840493-76840512 MS.gene37985:CDS 45.0%
! TTTGTGGACTGTTCATCGCT+CGG + chr5.1:76841262-76841281 MS.gene37985:intron 45.0%
!! AAGGGTATCACAGGAAGCAT+TGG + chr5.1:76839111-76839130 MS.gene37985:CDS 45.0%
!! CAGGGTTTTTGGAAGCTGTT+TGG - chr5.1:76839020-76839039 None:intergenic 45.0%
!! CGGAGTACTTTTCATCCTTG+AGG + chr5.1:76840020-76840039 MS.gene37985:CDS 45.0%
!! GACTAATTTCTGGTGCAGGT+TGG + chr5.1:76840710-76840729 MS.gene37985:intron 45.0%
!! TTCTTGCTTGACTTGGCAAC+TGG + chr5.1:76840076-76840095 MS.gene37985:CDS 45.0%
AGAATCCACTGACCCTTCAG+TGG + chr5.1:76840144-76840163 MS.gene37985:CDS 50.0%
CAGCACTCTATGTGACATGG+TGG + chr5.1:76840868-76840887 MS.gene37985:CDS 50.0%
CCCTCTCCCTGTATATCTCA+AGG + chr5.1:76838450-76838469 MS.gene37985:CDS 50.0%
CGCCACACAAAAATAGGTGG+AGG + chr5.1:76839639-76839658 MS.gene37985:CDS 50.0%
GAACCGAAAGCAAAGAGCCA+TGG - chr5.1:76841764-76841783 None:intergenic 50.0%
GAGTCGAGTGTCTTCAGGAT+TGG + chr5.1:76838561-76838580 MS.gene37985:intron 50.0%
GGCTCTTTGCTTTCGGTTCT+TGG + chr5.1:76841765-76841784 MS.gene37985:CDS 50.0%
TACAGGTGGCTACTATGTCC+AGG + chr5.1:76841192-76841211 MS.gene37985:CDS 50.0%
TAGGGGGCAGGAGAACTATT+TGG + chr5.1:76841103-76841122 MS.gene37985:intron 50.0%
TATTTCCGGGACGAACCTCA+AGG - chr5.1:76840038-76840057 None:intergenic 50.0%
TCGGAGTTGAGCCTCTGTAT+TGG - chr5.1:76840529-76840548 None:intergenic 50.0%
TGAGATATACAGGGAGAGGG+GGG - chr5.1:76838450-76838469 None:intergenic 50.0%
TGCATGGAACCAACAGATGG+AGG - chr5.1:76838319-76838338 None:intergenic 50.0%
TTCATCCTTGAGGTTCGTCC+CGG + chr5.1:76840030-76840049 MS.gene37985:CDS 50.0%
! CTTGCTTTGATGGGTCCTTC+TGG + chr5.1:76839147-76839166 MS.gene37985:CDS 50.0%
! GTTGGTTCCATGCAGATTGC+AGG + chr5.1:76838325-76838344 MS.gene37985:CDS 50.0%
! TTGATGGGTCCTTCTGGTAG+TGG + chr5.1:76839153-76839172 MS.gene37985:CDS 50.0%
AATCGCCACTGAAGGGTCAG+TGG - chr5.1:76840152-76840171 None:intergenic 55.0%
AGAGGCTCAACTCCGAGATC+AGG + chr5.1:76840533-76840552 MS.gene37985:CDS 55.0%
AGGGGGGTCTTGGTTGAAAC+TGG - chr5.1:76838434-76838453 None:intergenic 55.0%
TGGGAAGGCTAGAGACACAG+CGG + chr5.1:76840000-76840019 MS.gene37985:CDS 55.0%
!! ATCACAGGAAGCATTGGCCC+CGG + chr5.1:76839117-76839136 MS.gene37985:CDS 55.0%
!! GGCTGGCTTTAAGAGCACTG+CGG + chr5.1:76840937-76840956 MS.gene37985:CDS 55.0%
ATACAGGGAGAGGGGGGTCT+TGG - chr5.1:76838444-76838463 None:intergenic 60.0%
! GTGAAAGCGAAGGAGGGTGC+AGG + chr5.1:76841665-76841684 MS.gene37985:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 76838268 76841822 76838268 ID=MS.gene37985
chr5.1 mRNA 76838268 76841822 76838268 ID=MS.gene37985.t1;Parent=MS.gene37985
chr5.1 exon 76838268 76838471 76838268 ID=MS.gene37985.t1.exon1;Parent=MS.gene37985.t1
chr5.1 CDS 76838268 76838471 76838268 ID=cds.MS.gene37985.t1;Parent=MS.gene37985.t1
chr5.1 exon 76838985 76839277 76838985 ID=MS.gene37985.t1.exon2;Parent=MS.gene37985.t1
chr5.1 CDS 76838985 76839277 76838985 ID=cds.MS.gene37985.t1;Parent=MS.gene37985.t1
chr5.1 exon 76839375 76839530 76839375 ID=MS.gene37985.t1.exon3;Parent=MS.gene37985.t1
chr5.1 CDS 76839375 76839530 76839375 ID=cds.MS.gene37985.t1;Parent=MS.gene37985.t1
chr5.1 exon 76839635 76839818 76839635 ID=MS.gene37985.t1.exon4;Parent=MS.gene37985.t1
chr5.1 CDS 76839635 76839818 76839635 ID=cds.MS.gene37985.t1;Parent=MS.gene37985.t1
chr5.1 exon 76839899 76840177 76839899 ID=MS.gene37985.t1.exon5;Parent=MS.gene37985.t1
chr5.1 CDS 76839899 76840177 76839899 ID=cds.MS.gene37985.t1;Parent=MS.gene37985.t1
chr5.1 exon 76840270 76840554 76840270 ID=MS.gene37985.t1.exon6;Parent=MS.gene37985.t1
chr5.1 CDS 76840270 76840554 76840270 ID=cds.MS.gene37985.t1;Parent=MS.gene37985.t1
chr5.1 exon 76840728 76841012 76840728 ID=MS.gene37985.t1.exon7;Parent=MS.gene37985.t1
chr5.1 CDS 76840728 76841012 76840728 ID=cds.MS.gene37985.t1;Parent=MS.gene37985.t1
chr5.1 exon 76841106 76841213 76841106 ID=MS.gene37985.t1.exon8;Parent=MS.gene37985.t1
chr5.1 CDS 76841106 76841213 76841106 ID=cds.MS.gene37985.t1;Parent=MS.gene37985.t1
chr5.1 exon 76841562 76841822 76841562 ID=MS.gene37985.t1.exon9;Parent=MS.gene37985.t1
chr5.1 CDS 76841562 76841822 76841562 ID=cds.MS.gene37985.t1;Parent=MS.gene37985.t1
Gene Sequence

>MS.gene37985

ATGGAAAATGTGAGAGAGGATGAGATTGAGGCCAACATGTCAATGTCACCTCCATCTGTTGGTTCCATGCAGATTGCAGGAAGCTTTGGTCACAGCATAGAATTCATGTCTCAGGCATACCTTCACAATAGGTATTCAGAGATTGACATTCGAGTTGAGGAATCCAGTTTCAACCAAGACCCCCCTCTCCCTGTATATCTCAAGGTAGTGAACAATTAGAGCAAAATATTAATTTTATCAGAAATCAAAGTTCTTTTTCTCTTAGCTCGAGAATTAAGGTTCTTCGTGCAATAGAGTCGAGTGTCTTCAGGATTGGTCCAAAAATAAGATGACTCAAACCCTTACTTTAGGCCTCCATGCTTTTCTTTAAACTTTAAAGATATATGTTAAATTAGATAAATCTGAGGATTTGTGAATTTGAGAAAAAGTATTAACCAGATTCAGATATATTCTTAACATGATTTTATTTTCTACTTTATTCTCGAATCCGTAAGTACTTAAATGACATTATACCTGCACTTATATTTGTTTTGATTTTTCAAAACTCCTTTTAGCATTCAAAATGATTTGATGGATGACCACTTGATATTGGAAACTGAATTCAAGAGTCAATGAGAATATTATCACCGACATTGTTTTGTTCATAATGATGTGTGCTGATAATTGCTTCACTTGATCACATTCTCAATAATAGACAATTTCTCATTTGATGTGCAGTTTGAAGATGTAGAGTTCAAAGTGAGAAATAGCCAAACAGCTTCCAAAAACCCTGTAAAGACAATGATGTCAAAGGTAGCAACACAACACCATGTAGAAGAAAATAACAAATACAAGACAATTTTAAAGGGTATCACAGGAAGCATTGGCCCCGGCGAAATTCTTGCTTTGATGGGTCCTTCTGGTAGTGGAAAGACAACCTTGTTAAGAGTTGTAGGAGGAAGATTACTTGATAATGTAAAGGGAAAGATATCTTACAATGATGTTCCATATAGTCCTGCTCTTAAAAGAAGGTTAAACATATTGTTAGAACATCAGCATCTATGATTCAATGCATGAATATGTGCTAACAATGTACTTTAATGTCTCTCTCTTTTATGCTACCTATAGGATTGGATTTGTAACACAAGAGGATGTTCTTTTCCCACAACTTACAGTTGAAGAAACATTGATCTTCTCTGCATTCTTAAGGCTACCAACCAACATGAGCAAGCAAGAAAAATATGCAAGAGTTGAGAATACTATCAAGGATCTAGGCCTAGAAAGGTGTGTGTCTAGCATGGATCAAAATTTGACGTAAAATATGATTATTGAATACTCAAATAAAGAAATTAAACTGTTTTCCTAAATAATCTTTTGTACAACCATAGATGTCGCCACACAAAAATAGGTGGAGGATATCTCAAAGGAATATCAGGAGGAGAAAGGAAGAGAACCAGCATAGGCTATGAAATTCTTGTTGAGCCTTCACTGCTACTACTTGATGAGCCAACTTCAGGTCTTGATTCCACCTCAGCAAACAAACTTCTTCTCACTCTTCAAGGACTAGCAAAGGTATCAGAAACTAAATTTAACTCTCATTTTGATAACATGTTTTGAACATATGCTGAAAAATACTTTTGAATTGCCCTTAGGCTGGAAGAACTATAATCACAACAATTCACCAGCCATCCAGCAGAATCTTTAACATGTTTGACAAACTTCTTCTGATATCAGAAGGCTCTCCTGTTTATTATGGGAAGGCTAGAGACACAGCGGAGTACTTTTCATCCTTGAGGTTCGTCCCGGAAATACCAATGAATCCAGCAGAATTCTTGCTTGACTTGGCAACTGGACAAGTGAATGATATAAGTATTCCACAAGATATTTTGAAAGATGAAGAATCCACTGACCCTTCAGTGGCGATTATTAAGGTAGGGTTAATCGTAATTTATTTATAGGCATTACTATCACATACATGGTCTATTTCATTCTCAACTTAATAATTGTTTATTTATCATGTTAGTATCTACAAATCAAGTATAAAGACATATTGGAGCCAAAAGAAAAAGAAGAGAATCATAGAGGAGCAAACACACCAAAACATCTTCAACTAGCCATTCAGGTTAAAAAGGAATGGACAGTGAGTTGGTTAGACCAATTCACCATTCTTTATAAGAGAACATATAGAGCAAGATTCAAGGAATATTTTGATATATTGAGATTGGTTCAAGCACTTGGAATCGCACTTCTGTTAGGGCTACTTTGGTGGAAATCTTCAACCAATACAGAGGCTCAACTCCGAGATCAGGTACTTACTACTAGGTAGTTTCAGGGACGGATCTGAACAATTTAAGTCATGGAGGGGGCAATTTACATATAAATTTATAGCATATATATCATTTTTAAAAACATAAATATGCATCATAATTGTTCTAAACAATTTTGAATTTTTCAGTAACCATTGACTAATTTCTGGTGCAGGTTGGTTTAATGTTCTATATTTGCATATTTTGGACATCTTCATGTATTTTTGGAGCAGTGTATGTCTTTCCATTTGAAAAGGTATACTTGAGAAAAGAAAGGAAAGCAGACATGTATAGACTTAGTGTATACTATGCAAGCAGCACTCTATGTGACATGGTGGCACATGTTTTGTATCCTACTGTTTTCATGCTTATTGTGTACTTCATGGCTGGCTTTAAGAGCACTGCGGCTTGCTTCTTCCTTACGTTATTTTCAGTTTTGCTGATTGCTATCACAAGTCAAGTAAGTTATGTCAACACTCAGAACATGTTAAAGGGTAATCATTTGTTTAAAAGTAGCTCTAATGAATTTCCCTGTTGTTTTTGTTGTTAATAGGGGGCAGGAGAACTATTTGGAGCTGCAGTTATGAGCATTCAAAGAGCAGGAATGGTTGCTTCTTTGATACTTATGTTATTCCTTCTTACAGGTGGCTACTATGTCCAGGTATGCACAAAGAAGTAGCAAGTAGAAGCAATGTTAGTTAAACATATCTTTGTGGACTGTTCATCGCTCGGATTAGAATGGGAAACCAAACTATACTTAACCGTTACAAGTTTGGTAAAACTGAACCGAAATGTTAAAGATTCATCTCGAACCTAGGTGCACCAGTTCAGTTTTCCTACCAAACCAAAACTATCTTTACATAAAACTGAATTATACAAATTAGGATTGTTATAAAAACAAAAACTTAACCAAACCAAATATTATGACTATTAAAAAAATCAAAAATTGCACTGTTAAACTAAACCAAAAAGACGATACTTAAAAACCTTGAATTGATTTGTCTTGCAGCACATACCAAAGTTCATGCAATGGTTGAAGTACATGTCATTCATGTACTATGGATTCAGGCTTCTTCTAAAAGTGCAATATTCAGGAGACCAACTATATGAATGTGAAAGCGAAGGAGGGTGCAGGACACTTCAAAGTTCACCTTCATTTGATACTGTAAACTTGAAAGGTGGCTTAAGTGAAGTTTGGATTCTGATAGCCATGGCTCTTTGCTTTCGGTTCTTGGCTTACTTTTGTCTACGCAGAAAGATTGATGTATGA
Protein sequence

>MS.gene37985.t1

MENVREDEIEANMSMSPPSVGSMQIAGSFGHSIEFMSQAYLHNRYSEIDIRVEESSFNQDPPLPVYLKFEDVEFKVRNSQTASKNPVKTMMSKVATQHHVEENNKYKTILKGITGSIGPGEILALMGPSGSGKTTLLRVVGGRLLDNVKGKISYNDVPYSPALKRRIGFVTQEDVLFPQLTVEETLIFSAFLRLPTNMSKQEKYARVENTIKDLGLERCRHTKIGGGYLKGISGGERKRTSIGYEILVEPSLLLLDEPTSGLDSTSANKLLLTLQGLAKAGRTIITTIHQPSSRIFNMFDKLLLISEGSPVYYGKARDTAEYFSSLRFVPEIPMNPAEFLLDLATGQVNDISIPQDILKDEESTDPSVAIIKYLQIKYKDILEPKEKEENHRGANTPKHLQLAIQVKKEWTVSWLDQFTILYKRTYRARFKEYFDILRLVQALGIALLLGLLWWKSSTNTEAQLRDQVGLMFYICIFWTSSCIFGAVYVFPFEKVYLRKERKADMYRLSVYYASSTLCDMVAHVLYPTVFMLIVYFMAGFKSTAACFFLTLFSVLLIAITSQGAGELFGAAVMSIQRAGMVASLILMLFLLTGGYYVQHIPKFMQWLKYMSFMYYGFRLLLKVQYSGDQLYECESEGGCRTLQSSPSFDTVNLKGGLSEVWILIAMALCFRFLAYFCLRRKIDV