AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene38265

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38265.t1 MTR_5g096390 98.830 684 8 0 1 684 1 684 0.0 1403
MS.gene38265.t1 MTR_1g054935 46.468 637 291 8 57 680 139 738 0.0 574
MS.gene38265.t1 MTR_1g054935 46.949 590 285 4 103 680 3 576 0.0 559
MS.gene38265.t1 MTR_7g106880 44.806 645 308 8 47 679 118 726 0.0 555
MS.gene38265.t1 MTR_1g054960 47.938 582 276 6 107 680 21 583 0.0 554
MS.gene38265.t1 MTR_7g106880 46.520 589 287 6 103 679 3 575 0.0 533
MS.gene38265.t1 MTR_2g079980 43.274 617 317 8 67 680 3 589 1.00e-174 511
MS.gene38265.t1 MTR_5g025470 44.089 626 308 7 64 680 44 636 4.80e-173 509
MS.gene38265.t1 MTR_8g059150 44.108 628 318 9 57 680 28 626 2.45e-169 499
MS.gene38265.t1 MTR_1g093990 42.628 624 332 8 64 680 56 660 5.58e-167 494
MS.gene38265.t1 MTR_1g096580 39.626 641 345 11 64 680 44 666 2.48e-154 462
MS.gene38265.t1 MTR_4g094060 34.735 547 313 19 104 627 68 593 1.38e-72 248
MS.gene38265.t1 MTR_4g094050 34.124 548 315 18 104 627 68 593 5.48e-70 242
MS.gene38265.t1 MTR_4g076970 31.516 587 339 16 72 616 1 566 7.86e-70 241
MS.gene38265.t1 MTR_1g108340 29.813 587 379 9 62 630 40 611 4.55e-69 239
MS.gene38265.t1 MTR_1g108340 29.813 587 379 9 62 630 40 611 5.53e-69 239
MS.gene38265.t1 MTR_8g093840 31.654 635 370 24 83 681 30 636 2.13e-67 233
MS.gene38265.t1 MTR_7g100120 26.790 754 449 22 11 678 5 741 1.20e-65 231
MS.gene38265.t1 MTR_4g076940 35.491 448 270 10 107 541 51 492 5.46e-65 228
MS.gene38265.t1 MTR_4g116540 30.835 587 370 15 108 681 74 637 6.77e-65 226
MS.gene38265.t1 MTR_4g076940 35.491 448 270 10 107 541 91 532 7.65e-65 228
MS.gene38265.t1 MTR_1g115790 30.667 600 368 18 63 626 72 659 2.65e-63 224
MS.gene38265.t1 MTR_4g094090 30.248 605 363 20 100 673 22 598 5.60e-63 221
MS.gene38265.t1 MTR_6g066240 32.188 553 328 15 102 628 59 590 5.99e-62 219
MS.gene38265.t1 MTR_4g076900 39.275 331 187 6 107 426 27 354 9.59e-62 218
MS.gene38265.t1 MTR_3g096410 30.846 603 367 21 107 681 56 636 8.89e-61 215
MS.gene38265.t1 MTR_4g094010 30.796 565 354 16 94 638 35 582 9.65e-61 216
MS.gene38265.t1 MTR_2g078080 30.654 535 328 14 107 629 48 551 2.56e-60 213
MS.gene38265.t1 MTR_3g463680 28.793 646 398 16 61 684 810 1415 2.14e-58 214
MS.gene38265.t1 MTR_3g463680 24.691 567 351 16 108 620 167 711 9.13e-31 130
MS.gene38265.t1 MTR_7g104100 27.603 605 379 16 56 637 836 1404 3.59e-57 211
MS.gene38265.t1 MTR_7g104100 25.654 573 329 22 109 616 182 722 7.48e-31 130
MS.gene38265.t1 MTR_1g094660 32.500 480 285 11 107 555 515 986 2.13e-56 208
MS.gene38265.t1 MTR_1g099570 27.970 665 379 26 58 683 3 606 1.65e-55 200
MS.gene38265.t1 MTR_1g050525 27.965 565 360 13 61 611 861 1392 2.50e-55 205
MS.gene38265.t1 MTR_1g050525 24.460 556 357 17 109 616 176 716 1.79e-29 125
MS.gene38265.t1 MTR_7g104150 27.110 616 386 16 36 611 789 1381 3.41e-55 205
MS.gene38265.t1 MTR_7g104150 24.174 575 335 20 109 616 184 724 5.04e-26 115
MS.gene38265.t1 MTR_1g094660 47.951 244 122 5 107 346 515 757 1.23e-54 202
MS.gene38265.t1 MTR_7g104110 27.333 600 375 16 50 611 797 1373 1.53e-54 202
MS.gene38265.t1 MTR_7g104110 23.227 564 354 14 109 616 178 718 1.63e-29 126
MS.gene38265.t1 MTR_4g054020 32.000 525 304 18 122 627 1 491 3.48e-54 196
MS.gene38265.t1 MTR_5g070320 28.598 542 331 13 109 624 858 1369 3.73e-53 199
MS.gene38265.t1 MTR_5g070320 25.258 582 349 18 108 629 168 723 3.62e-34 140
MS.gene38265.t1 MTR_5g070320 28.598 542 331 13 109 624 667 1178 4.40e-53 198
MS.gene38265.t1 MTR_5g070320 23.933 539 324 19 150 629 21 532 4.58e-23 105
MS.gene38265.t1 MTR_5g070320 28.598 542 331 13 109 624 571 1082 4.96e-53 198
MS.gene38265.t1 MTR_5g070320 23.983 467 304 16 196 637 4 444 7.50e-21 98.6
MS.gene38265.t1 MTR_7g098800 27.288 590 391 13 109 684 803 1368 7.92e-53 197
MS.gene38265.t1 MTR_7g098800 24.359 624 387 21 65 627 85 684 4.17e-31 131
MS.gene38265.t1 MTR_4g093845 29.422 554 341 16 100 627 50 579 3.39e-52 191
MS.gene38265.t1 MTR_7g104130 27.013 596 384 14 50 611 803 1381 5.08e-52 195
MS.gene38265.t1 MTR_7g104130 28.938 273 157 7 109 345 184 455 1.44e-25 113
MS.gene38265.t1 MTR_7g098760 27.223 551 366 12 108 643 879 1409 1.61e-51 194
MS.gene38265.t1 MTR_7g098760 30.986 284 159 8 98 345 151 433 5.11e-29 124
MS.gene38265.t1 MTR_1g492950 27.290 513 339 10 109 606 894 1387 1.92e-51 193
MS.gene38265.t1 MTR_1g492950 31.752 274 148 7 109 345 189 460 7.82e-29 124
MS.gene38265.t1 MTR_1g011650 27.365 592 376 17 61 635 844 1398 1.95e-51 193
MS.gene38265.t1 MTR_1g011650 23.633 567 370 15 98 616 155 706 2.23e-27 119
MS.gene38265.t1 MTR_2g101090 27.505 549 330 15 109 625 871 1383 7.65e-51 191
MS.gene38265.t1 MTR_2g101090 24.612 516 280 17 108 563 178 644 4.82e-25 112
MS.gene38265.t1 MTR_7g104130 27.069 580 374 13 50 597 803 1365 1.11e-50 191
MS.gene38265.t1 MTR_7g104130 28.938 273 157 7 109 345 184 455 1.51e-25 113
MS.gene38265.t1 MTR_4g076940 34.197 386 238 8 167 541 19 399 1.24e-50 186
MS.gene38265.t1 MTR_8g014360 27.808 543 336 13 109 625 905 1417 1.52e-50 191
MS.gene38265.t1 MTR_8g014360 24.417 557 368 14 108 621 177 723 4.09e-34 140
MS.gene38265.t1 MTR_8g107450 42.449 245 137 4 104 345 64 307 2.65e-50 188
MS.gene38265.t1 MTR_4g123850 27.073 591 364 17 61 628 826 1372 7.30e-50 189
MS.gene38265.t1 MTR_4g123850 23.913 552 364 14 109 616 168 707 2.38e-31 132
MS.gene38265.t1 MTR_7g098780 26.766 538 353 14 109 628 845 1359 9.12e-50 188
MS.gene38265.t1 MTR_7g098780 28.882 322 192 6 61 345 125 446 1.69e-30 129
MS.gene38265.t1 MTR_5g030910 45.082 244 129 5 103 343 45 286 1.31e-49 185
MS.gene38265.t1 MTR_7g098750 26.642 548 371 12 109 643 613 1142 2.69e-49 187
MS.gene38265.t1 MTR_7g098750 22.426 437 302 14 211 629 28 445 1.08e-15 82.0
MS.gene38265.t1 MTR_7g098750 26.642 548 371 12 109 643 883 1412 3.46e-49 186
MS.gene38265.t1 MTR_7g098750 24.144 584 372 19 98 629 151 715 1.65e-30 129
MS.gene38265.t1 MTR_4g011640 27.624 543 358 13 109 636 863 1385 6.10e-49 186
MS.gene38265.t1 MTR_4g011640 29.444 360 202 12 85 398 146 499 4.05e-32 134
MS.gene38265.t1 MTR_4g113070 28.413 542 340 13 109 628 844 1359 9.48e-49 185
MS.gene38265.t1 MTR_4g113070 24.468 564 349 15 108 616 149 690 1.80e-25 113
MS.gene38265.t1 MTR_2g102660 27.440 543 363 12 109 638 855 1379 1.80e-48 184
MS.gene38265.t1 MTR_2g102660 24.671 608 377 18 98 648 156 739 1.39e-34 142
MS.gene38265.t1 MTR_7g098370 26.439 556 362 14 109 643 841 1370 1.84e-48 184
MS.gene38265.t1 MTR_7g098370 30.640 297 166 9 85 345 141 433 3.69e-30 128
MS.gene38265.t1 MTR_7g098740 26.727 550 368 12 109 643 841 1370 2.00e-48 184
MS.gene38265.t1 MTR_7g098740 29.836 305 177 8 77 345 130 433 2.66e-30 128
MS.gene38265.t1 MTR_2g102640 27.808 543 361 12 109 638 858 1382 2.05e-48 184
MS.gene38265.t1 MTR_2g102640 24.959 609 374 19 98 648 156 739 1.12e-33 139
MS.gene38265.t1 MTR_1g011640 26.244 583 375 15 61 625 821 1366 3.45e-48 184
MS.gene38265.t1 MTR_1g011640 30.403 273 153 8 109 345 154 425 5.94e-24 108
MS.gene38265.t1 MTR_7g098750 27.115 520 347 12 109 614 883 1384 4.37e-48 183
MS.gene38265.t1 MTR_7g098750 24.144 584 372 19 98 629 151 715 1.20e-30 129
MS.gene38265.t1 MTR_4g011630 27.656 546 356 15 109 636 866 1390 8.96e-48 182
MS.gene38265.t1 MTR_4g011630 29.880 415 222 14 88 451 152 548 1.89e-32 135
MS.gene38265.t1 MTR_2g102670 27.440 543 363 12 109 638 838 1362 9.52e-48 182
MS.gene38265.t1 MTR_2g102670 22.937 606 372 17 98 648 156 721 4.78e-28 121
MS.gene38265.t1 MTR_8g014360 30.732 410 254 10 109 506 905 1296 4.41e-47 180
MS.gene38265.t1 MTR_8g014360 24.417 557 368 14 108 621 177 723 4.34e-34 140
MS.gene38265.t1 MTR_3g107870 27.101 583 375 16 61 628 857 1404 4.42e-47 180
MS.gene38265.t1 MTR_3g107870 25.926 567 357 19 98 616 155 706 4.02e-34 140
MS.gene38265.t1 MTR_7g101780 31.006 487 291 13 105 555 510 987 9.88e-47 179
MS.gene38265.t1 MTR_7g098320 26.268 552 370 12 108 643 874 1404 2.00e-46 178
MS.gene38265.t1 MTR_7g098320 30.847 295 167 8 87 345 136 429 1.26e-29 126
MS.gene38265.t1 MTR_4g011620 29.583 480 288 15 109 560 856 1313 5.53e-46 177
MS.gene38265.t1 MTR_4g011620 24.437 577 373 16 100 628 152 713 7.82e-32 133
MS.gene38265.t1 MTR_1g063920 29.652 489 297 13 105 559 489 964 8.76e-46 176
MS.gene38265.t1 MTR_7g098300 26.993 552 360 13 109 643 879 1404 1.16e-45 176
MS.gene38265.t1 MTR_7g098300 31.408 277 153 8 105 345 158 433 6.64e-29 124
MS.gene38265.t1 MTR_4g058000 30.550 491 290 11 105 555 503 982 3.27e-45 174
MS.gene38265.t1 MTR_3g040670 42.857 245 130 7 129 367 201 441 5.99e-42 158
MS.gene38265.t1 MTR_7g098320 28.155 412 262 10 109 506 875 1266 2.61e-40 159
MS.gene38265.t1 MTR_7g098320 32.042 284 155 9 99 345 147 429 1.59e-29 126
MS.gene38265.t1 MTR_2g095390 25.035 715 428 24 21 678 37 700 1.71e-38 152
MS.gene38265.t1 MTR_7g098890 26.449 552 337 19 108 627 783 1297 3.90e-35 143
MS.gene38265.t1 MTR_7g098890 29.795 292 180 12 61 331 86 373 7.66e-24 108
MS.gene38265.t1 MTR_4g089130 51.923 104 39 1 224 327 1 93 9.18e-27 105
MS.gene38265.t1 MTR_7g407080 22.925 506 311 15 125 609 128 575 1.56e-25 112
MS.gene38265.t1 MTR_8g103450 29.066 289 157 10 8 291 162 407 2.74e-23 103
MS.gene38265.t1 MTR_1567s0010 31.282 195 121 6 117 308 250 434 2.90e-20 94.7
MS.gene38265.t1 MTR_7g060570 30.932 236 118 7 119 350 938 1132 1.09e-18 91.7
MS.gene38265.t1 MTR_7g091350 53.750 80 37 0 232 311 81 160 3.11e-17 80.1
MS.gene38265.t1 MTR_4g109720 31.754 211 131 9 109 314 404 606 4.83e-17 85.5
MS.gene38265.t1 MTR_7g079540 30.435 230 130 8 107 314 98 319 7.51e-17 83.2
MS.gene38265.t1 MTR_7g033710 30.769 221 123 11 109 315 442 646 1.08e-16 84.7
MS.gene38265.t1 MTR_3g086430 29.310 232 146 8 107 328 1016 1239 1.88e-16 84.3
MS.gene38265.t1 MTR_5g075955 30.660 212 135 7 107 314 367 570 7.22e-16 81.6
MS.gene38265.t1 MTR_5g075960 30.660 212 135 7 107 314 481 684 8.90e-16 81.6
MS.gene38265.t1 MTR_5g075955 30.660 212 135 7 107 314 479 682 9.60e-16 81.6
MS.gene38265.t1 MTR_3g093430 30.201 298 176 15 107 393 379 655 3.06e-15 80.5
MS.gene38265.t1 MTR_7g079540 30.144 209 117 7 107 293 98 299 1.85e-14 75.1
MS.gene38265.t1 MTR_7g102070 32.039 206 126 8 109 309 443 639 2.78e-14 77.4
MS.gene38265.t1 MTR_6g009080 29.245 212 134 7 108 309 229 434 3.63e-14 75.9
MS.gene38265.t1 MTR_8g022270 26.645 304 189 11 109 399 615 897 3.90e-14 77.0
MS.gene38265.t1 MTR_8g022270 29.858 211 136 7 108 314 1258 1460 4.05e-12 70.5
MS.gene38265.t1 MTR_1g059830 31.507 219 122 9 103 308 390 593 4.56e-14 76.3
MS.gene38265.t1 MTR_6g008820 29.439 214 138 7 109 317 806 1011 4.69e-14 76.6
MS.gene38265.t1 MTR_6g008820 29.439 214 138 7 109 317 698 903 4.78e-14 76.3
MS.gene38265.t1 MTR_6g008820 28.378 222 147 7 109 326 44 257 9.99e-11 65.9
MS.gene38265.t1 MTR_6g008820 29.439 214 138 7 109 317 890 1095 4.83e-14 76.6
MS.gene38265.t1 MTR_6g008820 29.439 214 138 7 109 317 1020 1225 5.86e-14 76.3
MS.gene38265.t1 MTR_1g025560 31.771 192 117 7 108 293 1010 1193 2.52e-13 74.3
MS.gene38265.t1 MTR_1g063170 32.039 206 126 9 109 309 416 612 3.21e-13 73.9
MS.gene38265.t1 MTR_6g008800 27.434 226 148 7 109 324 1024 1243 3.72e-13 73.6
MS.gene38265.t1 MTR_6g008800 30.890 191 118 7 109 293 378 560 2.87e-11 67.4
MS.gene38265.t1 MTR_4g108153 28.646 192 126 5 101 289 582 765 4.00e-13 73.6
MS.gene38265.t1 MTR_5g029750 29.310 232 146 10 74 293 330 555 4.90e-13 73.2
MS.gene38265.t1 MTR_5g029750 29.032 217 142 8 109 321 1006 1214 4.69e-12 70.1
MS.gene38265.t1 MTR_6g009150 28.910 211 134 7 109 309 1034 1238 4.95e-13 73.2
MS.gene38265.t1 MTR_6g009150 30.049 203 129 7 98 293 365 561 1.09e-11 68.9
MS.gene38265.t1 MTR_6g009200 29.302 215 138 7 109 317 1037 1243 6.98e-13 72.8
MS.gene38265.t1 MTR_6g009200 31.461 178 112 6 120 293 389 560 4.23e-11 67.0
MS.gene38265.t1 MTR_3g107800 28.750 240 151 9 109 338 413 642 7.04e-13 72.8
MS.gene38265.t1 MTR_6g009030 27.876 226 147 7 109 324 1016 1235 1.25e-12 72.0
MS.gene38265.t1 MTR_6g009030 30.526 190 122 6 108 293 377 560 1.95e-11 68.2
MS.gene38265.t1 MTR_6g009070 27.459 244 157 10 109 342 951 1184 1.55e-12 71.6
MS.gene38265.t1 MTR_6g009070 29.412 221 140 7 83 293 286 500 2.66e-11 67.8
MS.gene38265.t1 MTR_5g033080 26.389 216 138 8 109 314 298 502 2.06e-12 70.5
MS.gene38265.t1 MTR_4g108163 28.272 191 126 5 102 289 613 795 2.30e-12 70.9
MS.gene38265.t1 MTR_5g033080 26.389 216 138 8 109 314 473 677 2.43e-12 70.9
MS.gene38265.t1 MTR_6g009110 29.515 227 144 8 77 293 347 567 3.51e-12 70.5
MS.gene38265.t1 MTR_6g009110 28.372 215 140 7 109 317 1035 1241 4.90e-12 70.1
MS.gene38265.t1 MTR_4g108170 29.480 173 111 5 120 289 628 792 4.01e-12 70.1
MS.gene38265.t1 MTR_6g009090 32.044 181 112 7 118 293 401 575 4.13e-12 69.7
MS.gene38265.t1 MTR_4g081190 28.311 219 139 9 107 318 1005 1212 4.16e-12 70.1
MS.gene38265.t1 MTR_4g081190 31.694 183 111 7 117 293 368 542 9.68e-11 65.9
MS.gene38265.t1 MTR_1309s0010 27.419 248 153 9 71 309 408 637 4.41e-12 69.7
MS.gene38265.t1 MTR_3g099990 24.390 287 183 10 110 390 545 803 9.96e-12 68.9
MS.gene38265.t1 MTR_4g108240 27.225 191 128 5 102 289 625 807 1.10e-11 68.9
MS.gene38265.t1 MTR_4g124050 30.000 240 148 9 109 338 413 642 1.31e-11 68.6
MS.gene38265.t1 MTR_4g124050 29.918 244 151 9 109 342 413 646 1.34e-11 68.6
MS.gene38265.t1 MTR_4g124050 30.000 210 121 10 98 293 1053 1250 9.15e-11 65.9
MS.gene38265.t1 MTR_7g091380 30.201 149 94 3 120 266 583 723 1.61e-11 68.6
MS.gene38265.t1 MTR_7g091380 30.201 149 94 3 120 266 381 521 1.95e-11 68.2
MS.gene38265.t1 MTR_7g091380 30.201 149 94 3 120 266 401 541 2.06e-11 68.2
MS.gene38265.t1 MTR_7g091380 30.201 149 94 3 120 266 583 723 2.06e-11 68.2
MS.gene38265.t1 MTR_3g080220 29.018 224 141 8 107 320 410 625 3.57e-11 67.4
MS.gene38265.t1 MTR_6g011680 27.570 214 143 7 109 318 1025 1230 3.76e-11 67.0
MS.gene38265.t1 MTR_4g123990 28.704 216 138 8 109 318 395 600 4.19e-11 67.0
MS.gene38265.t1 MTR_4g108240 26.842 190 128 5 101 287 624 805 7.01e-11 66.2
MS.gene38265.t1 MTR_3g437990 28.108 185 118 5 110 289 545 719 7.72e-11 66.2
MS.gene38265.t1 MTR_4g124000 27.727 220 143 8 109 322 395 604 7.79e-11 66.2
MS.gene38265.t1 MTR_1g099280 24.490 245 161 10 67 308 595 818 9.36e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene38265.t1 AT3G13220 72.455 668 177 5 23 684 16 682 0.0 1000
MS.gene38265.t1 AT5G06530 43.731 654 304 8 47 680 137 746 0.0 559
MS.gene38265.t1 AT5G06530 43.731 654 304 8 47 680 137 746 0.0 559
MS.gene38265.t1 AT1G31770 44.839 620 314 7 64 680 50 644 1.23e-176 518
MS.gene38265.t1 AT5G06530 44.940 583 273 7 47 609 137 691 1.83e-175 517
MS.gene38265.t1 AT3G25620 43.153 628 323 9 64 679 65 670 1.69e-166 493
MS.gene38265.t1 AT4G27420 40.763 655 349 8 41 680 1 631 3.29e-164 486
MS.gene38265.t1 AT5G06530 46.429 504 242 5 126 609 1 496 5.70e-161 473
MS.gene38265.t1 AT1G71960 38.769 650 360 12 53 680 26 659 9.19e-148 445
MS.gene38265.t1 AT3G25620 44.794 413 203 7 64 468 65 460 1.86e-109 339
MS.gene38265.t1 AT2G01320 30.810 568 370 10 70 627 51 605 6.73e-79 265
MS.gene38265.t1 AT2G01320 30.810 568 370 10 70 627 51 605 6.73e-79 265
MS.gene38265.t1 AT2G01320 30.810 568 370 10 70 627 51 605 3.15e-78 265
MS.gene38265.t1 AT2G01320 30.810 568 370 10 70 627 51 605 3.16e-78 265
MS.gene38265.t1 AT2G01320 30.810 568 370 10 70 627 51 605 3.23e-78 265
MS.gene38265.t1 AT2G01320 30.810 568 370 10 70 627 51 605 3.23e-78 265
MS.gene38265.t1 AT2G13610 32.051 624 384 17 77 679 32 636 1.40e-75 256
MS.gene38265.t1 AT2G01320 31.743 482 308 9 70 543 51 519 9.01e-70 237
MS.gene38265.t1 AT2G01320 31.743 482 308 9 70 543 51 519 9.01e-70 237
MS.gene38265.t1 AT3G21090 31.424 611 356 18 107 679 43 628 3.73e-66 231
MS.gene38265.t1 AT2G37360 27.393 679 402 16 64 678 95 746 1.42e-65 231
MS.gene38265.t1 AT3G53510 28.549 634 364 15 107 678 124 730 6.63e-63 223
MS.gene38265.t1 AT3G55100 28.047 681 403 18 50 678 8 653 6.85e-62 219
MS.gene38265.t1 AT3G55100 28.047 681 403 18 50 678 8 653 6.85e-62 219
MS.gene38265.t1 AT3G55130 28.921 695 370 24 62 678 68 716 1.02e-61 219
MS.gene38265.t1 AT3G55110 30.254 552 346 14 107 637 89 622 3.58e-61 218
MS.gene38265.t1 AT1G51500 30.629 604 339 19 50 616 1 561 1.02e-60 216
MS.gene38265.t1 AT1G51460 31.319 546 321 12 107 616 28 555 5.17e-60 214
MS.gene38265.t1 AT3G55090 30.052 579 347 17 104 646 102 658 7.28e-60 214
MS.gene38265.t1 AT2G39350 30.000 560 335 15 105 626 105 645 2.71e-59 213
MS.gene38265.t1 AT3G53480 29.084 557 356 12 103 642 871 1405 3.31e-59 217
MS.gene38265.t1 AT3G53480 24.370 595 339 22 85 609 165 718 2.95e-29 125
MS.gene38265.t1 AT1G17840 31.041 567 314 18 103 628 63 593 6.78e-59 211
MS.gene38265.t1 AT4G25750 29.125 594 352 20 109 683 30 573 8.28e-59 208
MS.gene38265.t1 AT1G53270 31.203 532 323 14 107 628 48 546 6.47e-58 206
MS.gene38265.t1 AT4G15230 29.433 547 352 12 97 628 814 1341 6.48e-58 213
MS.gene38265.t1 AT4G15230 31.502 273 150 7 109 345 156 427 2.10e-32 135
MS.gene38265.t1 AT4G15230 29.433 547 352 12 97 628 814 1341 6.48e-58 213
MS.gene38265.t1 AT4G15230 31.502 273 150 7 109 345 156 427 2.10e-32 135
MS.gene38265.t1 AT4G15230 29.433 547 352 12 97 628 735 1262 8.53e-58 213
MS.gene38265.t1 AT4G15230 31.502 273 150 7 109 345 77 348 2.18e-32 135
MS.gene38265.t1 AT1G59870 29.027 596 375 15 61 642 861 1422 1.64e-57 212
MS.gene38265.t1 AT1G59870 25.512 635 368 20 108 673 185 783 2.24e-37 150
MS.gene38265.t1 AT5G13580 30.128 624 360 20 42 628 49 633 5.96e-57 206
MS.gene38265.t1 AT4G15233 27.288 601 381 12 42 628 775 1333 1.18e-56 209
MS.gene38265.t1 AT4G15233 29.651 344 196 12 42 345 89 426 7.26e-31 130
MS.gene38265.t1 AT2G37280 26.799 556 374 10 103 644 676 1212 1.35e-56 209
MS.gene38265.t1 AT2G37280 23.704 540 328 18 125 606 12 525 4.15e-28 121
MS.gene38265.t1 AT2G37280 26.978 556 373 11 103 644 834 1370 1.43e-56 209
MS.gene38265.t1 AT2G37280 24.071 565 345 18 100 606 145 683 3.17e-32 134
MS.gene38265.t1 AT4G15233 27.288 601 381 12 42 628 713 1271 1.44e-56 209
MS.gene38265.t1 AT4G15233 29.651 344 196 12 42 345 27 364 6.42e-31 130
MS.gene38265.t1 AT4G15233 27.288 601 381 12 42 628 713 1271 1.44e-56 209
MS.gene38265.t1 AT4G15233 29.651 344 196 12 42 345 27 364 6.42e-31 130
MS.gene38265.t1 AT2G37280 26.799 556 374 10 103 644 863 1399 1.48e-56 209
MS.gene38265.t1 AT2G37280 22.896 594 345 18 100 606 145 712 1.01e-28 123
MS.gene38265.t1 AT4G15233 27.288 601 381 12 42 628 766 1324 1.58e-56 209
MS.gene38265.t1 AT4G15233 28.488 344 191 13 42 345 89 417 1.46e-26 116
MS.gene38265.t1 AT4G15233 27.288 601 381 12 42 628 757 1315 1.63e-56 209
MS.gene38265.t1 AT4G15233 30.675 326 198 11 42 345 89 408 1.06e-32 136
MS.gene38265.t1 AT4G15236 27.288 601 381 12 42 628 773 1331 2.13e-56 208
MS.gene38265.t1 AT4G15236 24.608 638 404 21 34 616 77 692 7.56e-34 139
MS.gene38265.t1 AT3G16340 29.368 538 339 10 109 628 836 1350 5.31e-56 207
MS.gene38265.t1 AT3G16340 25.445 562 349 17 108 620 161 701 1.02e-30 130
MS.gene38265.t1 AT3G16340 29.368 538 339 10 109 628 841 1355 5.63e-56 207
MS.gene38265.t1 AT3G16340 25.933 563 350 18 108 620 161 706 1.95e-32 135
MS.gene38265.t1 AT2G29940 30.754 517 324 12 109 610 853 1350 7.19e-56 207
MS.gene38265.t1 AT2G29940 25.303 577 355 18 108 629 174 729 2.20e-33 138
MS.gene38265.t1 AT2G37010 30.229 612 358 19 105 678 496 1076 7.33e-56 206
MS.gene38265.t1 AT2G37010 30.229 612 358 19 105 678 496 1076 7.33e-56 206
MS.gene38265.t1 AT3G30842 26.930 583 376 14 61 628 815 1362 2.05e-55 205
MS.gene38265.t1 AT3G30842 24.382 607 386 22 65 615 111 700 3.63e-34 140
MS.gene38265.t1 AT1G66950 27.444 583 375 12 42 606 821 1373 1.33e-54 203
MS.gene38265.t1 AT1G66950 23.273 666 419 20 71 673 152 788 2.97e-31 131
MS.gene38265.t1 AT1G15210 28.523 589 359 17 61 628 834 1381 2.46e-54 202
MS.gene38265.t1 AT1G15210 23.975 634 383 19 44 620 137 728 3.74e-33 137
MS.gene38265.t1 AT4G15233 26.794 627 375 15 42 628 775 1357 3.96e-54 201
MS.gene38265.t1 AT4G15233 29.651 344 196 12 42 345 89 426 8.40e-31 130
MS.gene38265.t1 AT2G36380 28.625 531 319 13 109 611 879 1377 6.92e-54 201
MS.gene38265.t1 AT2G36380 23.617 669 445 17 61 677 136 790 3.34e-35 144
MS.gene38265.t1 AT2G26910 27.768 587 392 10 109 681 845 1413 2.66e-53 199
MS.gene38265.t1 AT2G26910 25.040 619 376 20 65 616 93 690 3.26e-31 131
MS.gene38265.t1 AT4G15215 30.545 550 342 14 97 628 811 1338 3.63e-53 199
MS.gene38265.t1 AT4G15215 30.938 320 180 9 65 345 107 424 4.27e-35 143
MS.gene38265.t1 AT4G15215 30.545 550 342 14 97 628 804 1331 3.79e-53 199
MS.gene38265.t1 AT4G15215 29.781 319 178 8 65 345 107 417 5.96e-33 137
MS.gene38265.t1 AT4G15215 30.545 550 342 14 97 628 808 1335 4.52e-53 198
MS.gene38265.t1 AT4G15215 30.938 320 180 9 65 345 104 421 5.18e-35 143
MS.gene38265.t1 AT4G15215 30.545 550 342 14 97 628 808 1335 4.52e-53 198
MS.gene38265.t1 AT4G15215 30.938 320 180 9 65 345 104 421 5.18e-35 143
MS.gene38265.t1 AT4G15215 30.545 550 342 14 97 628 808 1335 4.52e-53 198
MS.gene38265.t1 AT4G15215 30.938 320 180 9 65 345 104 421 5.18e-35 143
MS.gene38265.t1 AT4G15215 30.545 550 342 14 97 628 808 1335 4.52e-53 198
MS.gene38265.t1 AT4G15215 30.938 320 180 9 65 345 104 421 5.18e-35 143
MS.gene38265.t1 AT4G15215 30.545 550 342 14 97 628 808 1335 4.52e-53 198
MS.gene38265.t1 AT4G15215 30.938 320 180 9 65 345 104 421 5.18e-35 143
MS.gene38265.t1 AT4G15215 30.545 550 342 14 97 628 801 1328 4.76e-53 198
MS.gene38265.t1 AT4G15215 29.781 319 178 8 65 345 104 414 6.27e-33 137
MS.gene38265.t1 AT4G15215 30.545 550 342 14 97 628 801 1328 4.76e-53 198
MS.gene38265.t1 AT4G15215 29.781 319 178 8 65 345 104 414 6.27e-33 137
MS.gene38265.t1 AT4G15215 30.545 550 342 14 97 628 801 1328 4.76e-53 198
MS.gene38265.t1 AT4G15215 29.781 319 178 8 65 345 104 414 6.27e-33 137
MS.gene38265.t1 AT4G15215 30.545 550 342 14 97 628 801 1328 4.76e-53 198
MS.gene38265.t1 AT4G15215 29.781 319 178 8 65 345 104 414 6.27e-33 137
MS.gene38265.t1 AT4G15230 29.094 519 334 11 97 602 814 1311 5.00e-53 198
MS.gene38265.t1 AT4G15230 31.502 273 150 7 109 345 156 427 3.48e-32 134
MS.gene38265.t1 AT4G15233 28.281 541 353 13 103 628 670 1190 1.04e-52 197
MS.gene38265.t1 AT4G15233 30.675 326 198 11 42 345 27 346 7.46e-33 136
MS.gene38265.t1 AT4G15233 28.281 541 353 13 103 628 670 1190 1.04e-52 197
MS.gene38265.t1 AT4G15233 30.675 326 198 11 42 345 27 346 7.46e-33 136
MS.gene38265.t1 AT5G52860 28.099 605 342 21 109 683 44 585 1.05e-52 192
MS.gene38265.t1 AT2G37280 27.875 513 335 11 103 602 834 1324 2.06e-52 196
MS.gene38265.t1 AT2G37280 24.071 565 345 18 100 606 145 683 4.30e-32 134
MS.gene38265.t1 AT1G15520 27.903 534 352 11 109 628 852 1366 8.07e-52 194
MS.gene38265.t1 AT1G15520 25.550 591 355 21 96 627 156 720 1.32e-34 142
MS.gene38265.t1 AT5G19410 29.118 601 358 22 105 681 62 618 2.75e-51 188
MS.gene38265.t1 AT5G19410 29.118 601 358 22 105 681 71 627 3.04e-51 188
MS.gene38265.t1 AT1G53390 31.064 470 281 10 107 543 521 980 1.05e-50 191
MS.gene38265.t1 AT5G60740 31.818 484 295 10 105 555 511 992 1.02e-47 182
MS.gene38265.t1 AT1G15520 28.979 421 269 9 109 517 852 1254 1.19e-44 173
MS.gene38265.t1 AT1G15520 25.550 591 355 21 96 627 156 720 9.97e-35 142
MS.gene38265.t1 AT2G28070 25.741 641 428 17 61 679 94 708 8.49e-42 162
MS.gene38265.t1 AT2G28070 25.741 641 428 17 61 679 94 708 8.49e-42 162
MS.gene38265.t1 AT5G39040 33.333 204 125 6 109 308 413 609 2.71e-17 86.7
MS.gene38265.t1 AT1G65410 30.435 230 130 8 107 314 97 318 5.39e-17 83.6
MS.gene38265.t1 AT3G47750 26.160 237 150 8 87 308 602 828 3.83e-15 80.1
MS.gene38265.t1 AT4G28620 30.660 212 135 8 107 314 452 655 7.75e-15 78.6
MS.gene38265.t1 AT5G58270 29.245 212 138 6 107 314 492 695 1.19e-14 78.2
MS.gene38265.t1 AT4G25960 30.952 210 121 9 116 315 425 620 2.46e-14 77.4
MS.gene38265.t1 AT4G25960 32.584 178 110 7 120 293 1058 1229 4.46e-11 67.0
MS.gene38265.t1 AT3G47790 25.000 212 147 5 101 309 598 800 5.44e-14 76.3
MS.gene38265.t1 AT3G28390 29.528 254 157 10 77 317 959 1203 7.34e-14 75.9
MS.gene38265.t1 AT3G28390 31.285 179 111 7 120 293 375 546 5.78e-13 73.2
MS.gene38265.t1 AT3G28415 30.396 227 140 9 109 324 1001 1220 1.02e-13 75.5
MS.gene38265.t1 AT3G28415 31.579 209 131 8 117 321 371 571 2.27e-12 71.2
MS.gene38265.t1 AT3G28415 30.396 227 140 9 109 324 993 1212 1.11e-13 75.5
MS.gene38265.t1 AT3G28415 31.579 209 131 8 117 321 363 563 2.47e-12 71.2
MS.gene38265.t1 AT5G61700 25.000 228 148 6 77 289 572 791 1.19e-13 75.1
MS.gene38265.t1 AT5G61700 25.000 228 148 6 77 289 572 791 1.19e-13 75.1
MS.gene38265.t1 AT1G70610 27.111 225 125 7 109 314 291 495 1.75e-13 73.9
MS.gene38265.t1 AT1G70610 27.111 225 125 7 109 314 472 676 1.89e-13 74.3
MS.gene38265.t1 AT5G61690 29.319 191 107 8 110 289 548 721 1.96e-13 74.3
MS.gene38265.t1 AT1G67940 33.488 215 126 9 109 318 44 246 2.21e-13 71.2
MS.gene38265.t1 AT3G47730 28.796 191 109 7 110 289 547 721 2.53e-13 74.3
MS.gene38265.t1 AT1G10680 32.086 187 105 8 117 293 386 560 2.60e-13 74.3
MS.gene38265.t1 AT5G61730 30.481 187 111 7 110 289 539 713 2.91e-13 73.9
MS.gene38265.t1 AT5G61730 30.481 187 111 7 110 289 549 723 3.14e-13 73.9
MS.gene38265.t1 AT1G10680 32.086 187 105 8 117 293 386 560 3.15e-13 73.9
MS.gene38265.t1 AT1G10680 30.653 199 126 7 120 314 1010 1200 2.86e-11 67.8
MS.gene38265.t1 AT3G47790 24.000 225 155 5 75 296 572 783 3.73e-13 73.6
MS.gene38265.t1 AT5G61690 28.272 191 110 7 110 289 548 722 3.83e-13 73.6
MS.gene38265.t1 AT3G47790 24.000 225 155 5 75 296 453 664 4.17e-13 73.2
MS.gene38265.t1 AT3G28345 31.731 208 126 9 120 321 387 584 4.72e-13 73.6
MS.gene38265.t1 AT3G28345 30.357 224 144 7 109 324 1012 1231 5.36e-12 70.1
MS.gene38265.t1 AT5G61740 27.572 243 158 9 70 308 538 766 4.80e-13 73.2
MS.gene38265.t1 AT5G61740 27.572 243 158 9 70 308 572 800 5.19e-13 73.2
MS.gene38265.t1 AT5G61740 27.572 243 158 9 70 308 433 661 5.69e-13 72.8
MS.gene38265.t1 AT4G28630 28.774 212 139 8 107 314 450 653 6.31e-13 72.4
MS.gene38265.t1 AT1G28010 29.954 217 134 10 109 318 389 594 7.64e-13 72.8
MS.gene38265.t1 AT1G28010 29.048 210 137 8 109 314 1023 1224 9.69e-12 69.3
MS.gene38265.t1 AT1G27940 30.734 218 131 11 109 318 388 593 1.37e-12 72.0
MS.gene38265.t1 AT1G27940 28.571 210 138 7 109 314 1021 1222 1.53e-12 71.6
MS.gene38265.t1 AT1G27940 28.571 210 138 7 109 314 807 1008 1.57e-12 71.6
MS.gene38265.t1 AT1G27940 30.734 218 131 11 109 318 174 379 1.61e-12 71.6
MS.gene38265.t1 AT3G28380 31.280 211 133 8 108 314 375 577 1.97e-12 71.2
MS.gene38265.t1 AT3G28380 30.455 220 133 10 117 324 1020 1231 1.62e-11 68.6
MS.gene38265.t1 AT3G62150 28.241 216 139 7 109 318 420 625 3.14e-12 70.9
MS.gene38265.t1 AT3G62150 28.241 216 139 7 109 318 420 625 3.14e-12 70.9
MS.gene38265.t1 AT3G62150 28.241 216 139 7 109 318 420 625 3.14e-12 70.9
MS.gene38265.t1 AT3G47770 26.190 210 143 6 102 308 597 797 3.19e-12 70.5
MS.gene38265.t1 AT2G36910 30.583 206 129 8 109 309 385 581 3.33e-12 70.9
MS.gene38265.t1 AT3G47740 24.153 236 156 7 87 308 597 823 3.68e-12 70.5
MS.gene38265.t1 AT3G47770 26.066 211 144 6 101 308 622 823 5.05e-12 70.1
MS.gene38265.t1 AT2G41700 25.641 195 129 7 101 289 1423 1607 1.58e-11 68.6
MS.gene38265.t1 AT2G41700 26.180 233 147 9 41 266 434 648 2.36e-11 68.2
MS.gene38265.t1 AT2G41700 25.641 195 129 7 101 289 1465 1649 1.83e-11 68.6
MS.gene38265.t1 AT2G41700 26.180 233 147 9 41 266 504 718 2.88e-11 67.8
MS.gene38265.t1 AT3G28860 29.126 206 134 7 117 318 1035 1232 4.40e-11 67.0
MS.gene38265.t1 AT5G46540 28.571 217 129 9 109 314 374 575 4.55e-11 67.0
MS.gene38265.t1 AT5G46540 32.934 167 80 6 116 266 1029 1179 9.83e-11 65.9

Find 137 sgRNAs with CRISPR-Local

Find 233 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTCTACATTTGCATATTT+TGG 0.095054 5.3:+77857370 MS.gene38265:CDS
GGCTCTTTGCTTTCGGTTCT+TGG 0.111838 5.3:+77858401 MS.gene38265:CDS
GCTGGATTCATTGGTATTTC+AGG 0.140529 5.3:-77856684 None:intergenic
CTTGGAATTGCACTTCTATT+AGG 0.177019 5.3:+77857115 MS.gene38265:CDS
GAAGGCTCTCCTGTTTATTA+TGG 0.192438 5.3:+77856615 MS.gene38265:CDS
CGGCGAAATTCTTGCTTTGA+TGG 0.209208 5.3:+77855773 MS.gene38265:CDS
CTTATGTTATTCCTTCTTAC+AGG 0.228543 5.3:+77857807 MS.gene38265:CDS
ACTCAAGTATAAAGACATTT+TGG 0.230089 5.3:+77856913 MS.gene38265:CDS
TTTGACATCATTGTCTTTAC+AGG 0.238405 5.3:-77855672 None:intergenic
CATGCTTATTGTGTACTTCA+TGG 0.253005 5.3:+77857548 MS.gene38265:CDS
CTTCTAAAAGTGCAATATTC+AGG 0.260030 5.3:+77858261 MS.gene38265:CDS
TGCTAGACACACACCTTTCT+AGG 0.276132 5.3:-77856159 None:intergenic
CATTCATGTACTATGGATTC+AGG 0.279268 5.3:+77858235 MS.gene38265:CDS
CCCTTCAGTGGCGATTATTA+AGG 0.290816 5.3:+77856791 MS.gene38265:CDS
AGATGTCGCCACACGAAAAT+AGG 0.301697 5.3:+77856270 MS.gene38265:intron
TTGGAATTGCACTTCTATTA+GGG 0.313501 5.3:+77857116 MS.gene38265:CDS
ACATCTTCAACTAGCTATTC+AGG 0.321562 5.3:+77856982 MS.gene38265:CDS
AAGGTGGCTTAAGTGAAGTT+TGG 0.323854 5.3:+77858364 MS.gene38265:CDS
CTTGCTTTGATGGGTCCTTC+TGG 0.338717 5.3:+77855783 MS.gene38265:CDS
CGCTTTCACATTCATATAGT+TGG 0.341387 5.3:-77858287 None:intergenic
GGATATCTCAAAGGCATATC+AGG 0.343990 5.3:+77856297 MS.gene38265:CDS
ACTAGCTATTCAGGTCAAAA+AGG 0.345576 5.3:+77856991 MS.gene38265:CDS
TGATCTTCTCTGCATTCTTA+AGG 0.348445 5.3:+77856071 MS.gene38265:CDS
TACATGTCATTCATGTACTA+TGG 0.353628 5.3:+77858228 MS.gene38265:CDS
TTCTTGCTTGACTTGGCAAC+TGG 0.354225 5.3:+77856711 MS.gene38265:CDS
TCTTATAAAGAATGGTGAAT+TGG 0.356972 5.3:-77857036 None:intergenic
TAGCCATGGCTCTTTGCTTT+CGG 0.358126 5.3:+77858394 MS.gene38265:CDS
AAGAATTCTGCTGGATTCAT+TGG 0.359339 5.3:-77856693 None:intergenic
TTCACTACCTTGAGATATAC+AGG 0.361221 5.3:-77855095 None:intergenic
CACTTCTATTAGGGCTACTT+TGG 0.361800 5.3:+77857125 MS.gene38265:CDS
AAACTTCTTCTCACTCTTCA+AGG 0.370422 5.3:+77856423 MS.gene38265:CDS
AGCAGAATTCTTGCTTGACT+TGG 0.376774 5.3:+77856704 MS.gene38265:CDS
CTGGATTCATTGGTATTTCA+GGG 0.378661 5.3:-77856683 None:intergenic
GTTGGTTCCATGCAGATTGC+AGG 0.381171 5.3:+77854963 MS.gene38265:CDS
ATAGCTAGTTGAAGATGTTT+TGG 0.386185 5.3:-77856977 None:intergenic
AAGGCTCTCCTGTTTATTAT+GGG 0.387461 5.3:+77856616 MS.gene38265:CDS
ATGCAGATTGCAGGAAGCTT+TGG 0.396748 5.3:+77854972 MS.gene38265:CDS
ACAACCTTGTTAAGAGTTGT+AGG 0.411458 5.3:+77855816 MS.gene38265:CDS
CTACTTGATGAGCCAACTTC+AGG 0.414761 5.3:+77856378 MS.gene38265:CDS
TTCAACCATTGCATGAACTT+TGG 0.419064 5.3:-77858204 None:intergenic
TTCTATTAGGGCTACTTTGG+TGG 0.423031 5.3:+77857128 MS.gene38265:CDS
CTTATTGTGTACTTCATGGC+TGG 0.423664 5.3:+77857552 MS.gene38265:CDS
TTGAGATTGGTTCAAGCACT+TGG 0.426645 5.3:+77857097 MS.gene38265:CDS
GGCGAAATTCTTGCTTTGAT+GGG 0.427925 5.3:+77855774 MS.gene38265:CDS
TTTCTTCAACTGTAAGTTGT+GGG 0.436204 5.3:-77856045 None:intergenic
CTAGCCTTCCCATAATAAAC+AGG 0.449141 5.3:-77856624 None:intergenic
GAGAATACTATCAAGGATCT+AGG 0.450601 5.3:+77856136 MS.gene38265:CDS
TTGATGGGTCCTTCTGGTAG+TGG 0.455405 5.3:+77855789 MS.gene38265:CDS
CTCAGGCATACCTTCACAAT+AGG 0.457158 5.3:+77855015 MS.gene38265:CDS
TCGGAGTTGAGCCTCTGTAT+TGG 0.465444 5.3:-77857161 None:intergenic
AAGAAGTTTGTTTGCTGAGG+TGG 0.466943 5.3:-77856409 None:intergenic
AGATTACTTGATAATGTAAA+GGG 0.470567 5.3:+77855843 MS.gene38265:CDS
CTATGTATTTCCATTTGAAA+AGG 0.471059 5.3:+77857419 MS.gene38265:CDS
AACATATAGAGCAAGATTCA+AGG 0.476898 5.3:+77857060 MS.gene38265:CDS
CATCAAAGCAAGAATTTCGC+CGG 0.479651 5.3:-77855772 None:intergenic
AAGATTACTTGATAATGTAA+AGG 0.483097 5.3:+77855842 MS.gene38265:CDS
ATATGTTCTCTTATAAAGAA+TGG 0.484237 5.3:-77857044 None:intergenic
TCATCTTTCAAAATATCTTG+TGG 0.484681 5.3:-77856756 None:intergenic
TTTGATACTGTAAACTTGAA+AGG 0.485964 5.3:+77858345 MS.gene38265:CDS
AAGTCAAGCAAGAATTCTGC+TGG 0.490022 5.3:-77856702 None:intergenic
AAGAATTTCATAGCCTATGC+TGG 0.493518 5.3:-77856337 None:intergenic
CAGCATAGAATTCATGTCTC+AGG 0.499450 5.3:+77854998 MS.gene38265:CDS
AGAGATTGACATTCGAGTTG+AGG 0.503993 5.3:+77855043 MS.gene38265:CDS
AAGTTTACAGTATCAAATGA+AGG 0.505100 5.3:-77858339 None:intergenic
ACCTTAATAATCGCCACTGA+AGG 0.506675 5.3:-77856792 None:intergenic
ATCAAAGCAAGAATTTCGCC+GGG 0.507268 5.3:-77855771 None:intergenic
AAGGGTATCACAGGAAGCAT+TGG 0.509325 5.3:+77855747 MS.gene38265:CDS
AGAGGCTCAACTCCGAGATC+AGG 0.509457 5.3:+77857168 MS.gene38265:CDS
AAACATGTTAAAGATTCTGC+TGG 0.514747 5.3:-77856571 None:intergenic
TCTTGCTTGCTCATGTTGGT+TGG 0.518009 5.3:-77856097 None:intergenic
GTTTCTTCAACTGTAAGTTG+TGG 0.518691 5.3:-77856046 None:intergenic
GTGAAAGCGAAGGAGGGTGC+AGG 0.519396 5.3:+77858301 MS.gene38265:CDS
TACAGGTGGCTACTATGTCC+AGG 0.524500 5.3:+77857824 MS.gene38265:CDS
CTCTCCTGTTTATTATGGGA+AGG 0.524723 5.3:+77856620 MS.gene38265:CDS
GAGCATTCAAAGAGCAGGAA+TGG 0.530777 5.3:+77857770 MS.gene38265:CDS
TAAAGATTCTGCTGGATGGC+TGG 0.531941 5.3:-77856563 None:intergenic
AAGGCATATCAGGAGGAGAA+AGG 0.533235 5.3:+77856307 MS.gene38265:CDS
TCAAGGATCTAGGCCTAGAA+AGG 0.537892 5.3:+77856146 MS.gene38265:CDS
ACAATAAGCATGAAAACAGT+AGG 0.539684 5.3:-77857537 None:intergenic
CATAGTAGCCACCTGTAAGA+AGG 0.541861 5.3:-77857818 None:intergenic
AGGTATACTTAAGAAAAGAA+AGG 0.543379 5.3:+77857439 MS.gene38265:CDS
ATAGTCCTGCTCTTAAAAGA+AGG 0.544365 5.3:+77855892 MS.gene38265:CDS
TCAATGTCACCTCCATCTGT+TGG 0.548912 5.3:+77854945 MS.gene38265:CDS
ATCACAGGAAGCATTGGCCC+CGG 0.551823 5.3:+77855753 MS.gene38265:CDS
AAAAGGAATGGACAGTGAGT+TGG 0.555020 5.3:+77857008 MS.gene38265:CDS
AAGAGTTGAGAATACTATCA+AGG 0.555684 5.3:+77856129 MS.gene38265:CDS
CCCTCTCCCTGTATATCTCA+AGG 0.560435 5.3:+77855088 MS.gene38265:CDS
ACCTTGAGATATACAGGGAG+AGG 0.561482 5.3:-77855089 None:intergenic
TGTGAGAGAGGATGAGATTG+AGG 0.565020 5.3:+77854914 MS.gene38265:CDS
ATGTTATTCCTTCTTACAGG+TGG 0.566372 5.3:+77857810 MS.gene38265:CDS
CACTCTTCAAGGACTAGCAA+AGG 0.570159 5.3:+77856434 MS.gene38265:CDS
AAAGCTTCCTGCAATCTGCA+TGG 0.573772 5.3:-77854970 None:intergenic
GATACTGTAAACTTGAAAGG+TGG 0.577773 5.3:+77858348 MS.gene38265:CDS
TTGACATCATTGTCTTTACA+GGG 0.580586 5.3:-77855671 None:intergenic
TACCTAGTAGTACCTGATCT+CGG 0.581158 5.3:-77857180 None:intergenic
GTTATGAGCATTCAAAGAGC+AGG 0.582016 5.3:+77857765 MS.gene38265:CDS
CCTTAATAATCGCCACTGAA+GGG 0.583592 5.3:-77856791 None:intergenic
GTGGAATCAAGACCTGAAGT+TGG 0.587104 5.3:-77856390 None:intergenic
TATGAATGTGAAAGCGAAGG+AGG 0.588398 5.3:+77858294 MS.gene38265:CDS
TGTAAAGACAATGATGTCAA+AGG 0.589535 5.3:+77855674 MS.gene38265:CDS
GCAAAACTGAAAATAACGTA+AGG 0.589831 5.3:-77857602 None:intergenic
TCATCAAGTAGTAGCAGTGA+AGG 0.590913 5.3:-77856366 None:intergenic
AAACTTCTTCTGATATCAGA+AGG 0.594489 5.3:+77856597 MS.gene38265:CDS
CGCCACACGAAAATAGGTGG+AGG 0.596422 5.3:+77856276 MS.gene38265:CDS
GAACCGAAAGCAAAGAGCCA+TGG 0.598115 5.3:-77858397 None:intergenic
GAGAAGAAGTTTGTTTGCTG+AGG 0.599548 5.3:-77856412 None:intergenic
AATCGCCACTGAAGGGTCAG+TGG 0.601040 5.3:-77856784 None:intergenic
ATCTGCATGGAACCAACAGA+TGG 0.603528 5.3:-77854957 None:intergenic
TCCTCCTACAACTCTTAACA+AGG 0.606674 5.3:-77855820 None:intergenic
CCTTGAGATATACAGGGAGA+GGG 0.607284 5.3:-77855088 None:intergenic
GATTGGATTTGTAACACAAG+AGG 0.611572 5.3:+77856012 MS.gene38265:CDS
ATGTTAAAGATTCTGCTGGA+TGG 0.613207 5.3:-77856567 None:intergenic
GAAAGGAAGAGAACCAGCAT+AGG 0.618520 5.3:+77856324 MS.gene38265:CDS
TGGAGGTGACATTGACATGT+TGG 0.632035 5.3:-77854937 None:intergenic
TGCATGGAACCAACAGATGG+AGG 0.632283 5.3:-77854954 None:intergenic
TATTTCAGGGACGAACCTCA+AGG 0.632640 5.3:-77856670 None:intergenic
ATAGGTGGAGGATATCTCAA+AGG 0.633463 5.3:+77856288 MS.gene38265:CDS
CTATATGAATGTGAAAGCGA+AGG 0.635438 5.3:+77858291 MS.gene38265:CDS
TGTCGCCACACGAAAATAGG+TGG 0.638943 5.3:+77856273 MS.gene38265:CDS
ATGAATGTGAAAGCGAAGGA+GGG 0.644388 5.3:+77858295 MS.gene38265:CDS
ACATACCAAAGTTCATGCAA+TGG 0.644730 5.3:+77858199 MS.gene38265:CDS
GTTGTCTTTCCACTACCAGA+AGG 0.648172 5.3:-77855798 None:intergenic
AGAATCCACTGACCCTTCAG+TGG 0.654429 5.3:+77856779 MS.gene38265:CDS
TTGAGATATACAGGGAGAGG+GGG 0.657072 5.3:-77855086 None:intergenic
TCTCTGAATACCTATTGTGA+AGG 0.657985 5.3:-77855025 None:intergenic
GATCATGGAAAATGTGAGAG+AGG 0.658226 5.3:+77854902 None:intergenic
AGTTTGGATTCTGATAGCCA+TGG 0.658413 5.3:+77858380 MS.gene38265:CDS
ACCTTGTTAAGAGTTGTAGG+AGG 0.662670 5.3:+77855819 MS.gene38265:CDS
CTTGAGATATACAGGGAGAG+GGG 0.662947 5.3:-77855087 None:intergenic
TATCTCAAAGGCATATCAGG+AGG 0.667992 5.3:+77856300 MS.gene38265:CDS
TCACTACCTTGAGATATACA+GGG 0.676242 5.3:-77855094 None:intergenic
GAAATCTTCAACCAATACAG+AGG 0.691223 5.3:+77857150 MS.gene38265:CDS
CAGCACTCTATGTGACATGG+TGG 0.711905 5.3:+77857500 MS.gene38265:CDS
AAGCAGCACTCTATGTGACA+TGG 0.726541 5.3:+77857497 MS.gene38265:CDS
TGGGAAGGCTAGCGACACAG+CGG 0.742089 5.3:+77856635 MS.gene38265:CDS
GGCTGGCTTTAAGAGCACTG+CGG 0.755321 5.3:+77857569 MS.gene38265:CDS
TCAAAGCAAGAATTTCGCCG+GGG 0.774276 5.3:-77855770 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAATAGTCATAATATT+TGG - chr5.3:77858106-77858125 None:intergenic 10.0%
!! GTTAATCGTAATTTATTTAT+AGG + chr5.3:77856818-77856837 MS.gene38265:intron 15.0%
!! TTAAAGTTTAAAGAAAAACA+TGG - chr5.3:77855263-77855282 None:intergenic 15.0%
!!! AAATACAAGACAATTTTAAA+GGG + chr5.3:77855729-77855748 MS.gene38265:CDS 15.0%
!!! ATATTTTGATATATTGAGAT+TGG + chr5.3:77857084-77857103 MS.gene38265:CDS 15.0%
!! AAAACTGAATTATACGAATT+AGG + chr5.3:77858051-77858070 MS.gene38265:intron 20.0%
!! AATAGTCATAATATTTGGTT+TGG - chr5.3:77858101-77858120 None:intergenic 20.0%
!! ATATGTTCTCTTATAAAGAA+TGG - chr5.3:77857047-77857066 None:intergenic 20.0%
!! GTTAAACATATATATCTTTG+TGG + chr5.3:77857882-77857901 MS.gene38265:intron 20.0%
!! TATTAACAACAAAAACAACA+GGG - chr5.3:77857717-77857736 None:intergenic 20.0%
!! TGTTAAATTAGATAAATCTG+AGG + chr5.3:77855290-77855309 MS.gene38265:intron 20.0%
!!! AAATCATTTTGAATGCTAAA+AGG - chr5.3:77855455-77855474 None:intergenic 20.0%
!!! AAGATTACTTGATAATGTAA+AGG + chr5.3:77855842-77855861 MS.gene38265:CDS 20.0%
!!! AGATTACTTGATAATGTAAA+GGG + chr5.3:77855843-77855862 MS.gene38265:CDS 20.0%
!!! ATTTGTTATTTTCTTCTACA+TGG - chr5.3:77855713-77855732 None:intergenic 20.0%
!!! CAAATACAAGACAATTTTAA+AGG + chr5.3:77855728-77855747 MS.gene38265:CDS 20.0%
!!! GTTTTATGTAAAGATAGTTT+TGG - chr5.3:77858036-77858055 None:intergenic 20.0%
!!! TGTTGTTTTTGTTGTTAATA+GGG + chr5.3:77857717-77857736 MS.gene38265:intron 20.0%
! AAGTTTAAAGAAAAACATGG+AGG - chr5.3:77855260-77855279 None:intergenic 25.0%
! AAGTTTACAGTATCAAATGA+AGG - chr5.3:77858342-77858361 None:intergenic 25.0%
! AGGTATACTTAAGAAAAGAA+AGG + chr5.3:77857439-77857458 MS.gene38265:CDS 25.0%
! ATCAAAACAAATATAAGTGC+AGG - chr5.3:77855421-77855440 None:intergenic 25.0%
! CAGATGAATCTTTAACATTT+CGG - chr5.3:77857978-77857997 None:intergenic 25.0%
! CTATGTATTTCCATTTGAAA+AGG + chr5.3:77857419-77857438 MS.gene38265:CDS 25.0%
! CTATTAACAACAAAAACAAC+AGG - chr5.3:77857718-77857737 None:intergenic 25.0%
! GTTAAGAATATATCTGAATC+TGG - chr5.3:77855343-77855362 None:intergenic 25.0%
! TAGCATTCAAAATGATTTGA+TGG + chr5.3:77855457-77855476 MS.gene38265:intron 25.0%
! TCATCTTTCAAAATATCTTG+TGG - chr5.3:77856759-77856778 None:intergenic 25.0%
! TCTTATAAAGAATGGTGAAT+TGG - chr5.3:77857039-77857058 None:intergenic 25.0%
! TTTGATACTGTAAACTTGAA+AGG + chr5.3:77858345-77858364 MS.gene38265:CDS 25.0%
!! ACTCAAGTATAAAGACATTT+TGG + chr5.3:77856913-77856932 MS.gene38265:CDS 25.0%
!! CTTAAGTATACCTTTTCAAA+TGG - chr5.3:77857432-77857451 None:intergenic 25.0%
!! TGATTCTCTTCTTTTTCTTT+CGG - chr5.3:77856941-77856960 None:intergenic 25.0%
!! TGTTCTACATTTGCATATTT+TGG + chr5.3:77857370-77857389 MS.gene38265:CDS 25.0%
!!! ATGTAAAGATAGTTTTGGTT+TGG - chr5.3:77858031-77858050 None:intergenic 25.0%
!!! CTGTTGTTTTTGTTGTTAAT+AGG + chr5.3:77857716-77857735 MS.gene38265:intron 25.0%
!!! GTTGTTTTTGTTGTTAATAG+GGG + chr5.3:77857718-77857737 MS.gene38265:intron 25.0%
!!! GTTTTTAAGTATCGTCTTTT+TGG - chr5.3:77858156-77858175 None:intergenic 25.0%
!!! TTGTTTTTGTTGTTAATAGG+GGG + chr5.3:77857719-77857738 MS.gene38265:intron 25.0%
AAACATGTTAAAGATTCTGC+TGG - chr5.3:77856574-77856593 None:intergenic 30.0%
AAACTTCTTCTGATATCAGA+AGG + chr5.3:77856597-77856616 MS.gene38265:CDS 30.0%
AACATATAGAGCAAGATTCA+AGG + chr5.3:77857060-77857079 MS.gene38265:CDS 30.0%
AAGACTCAGAACATGTTAAA+GGG + chr5.3:77857657-77857676 MS.gene38265:intron 30.0%
AAGAGTTGAGAATACTATCA+AGG + chr5.3:77856129-77856148 MS.gene38265:CDS 30.0%
ACAATAAGCATGAAAACAGT+AGG - chr5.3:77857540-77857559 None:intergenic 30.0%
ATACTTAACCGTTACAAGTT+TGG + chr5.3:77857942-77857961 MS.gene38265:intron 30.0%
ATTCAGTTTCCAATATCAAG+TGG - chr5.3:77855487-77855506 None:intergenic 30.0%
CATTAGGAACAAAACAATGT+CGG - chr5.3:77855535-77855554 None:intergenic 30.0%
CGAAATGTTAAAGATTCATC+TGG + chr5.3:77857976-77857995 MS.gene38265:intron 30.0%
CTTATGTTATTCCTTCTTAC+AGG + chr5.3:77857807-77857826 MS.gene38265:CDS 30.0%
GAAAAAGAAGAGAATCATAG+AGG + chr5.3:77856944-77856963 MS.gene38265:CDS 30.0%
GCAAAACTGAAAATAACGTA+AGG - chr5.3:77857605-77857624 None:intergenic 30.0%
GTTACAAATCCAATCCTATA+AGG - chr5.3:77856007-77856026 None:intergenic 30.0%
TACATGTCATTCATGTACTA+TGG + chr5.3:77858228-77858247 MS.gene38265:CDS 30.0%
TCTCATTTATGCTACCTTAT+AGG + chr5.3:77855990-77856009 MS.gene38265:intron 30.0%
TGTAAAGACAATGATGTCAA+AGG + chr5.3:77855674-77855693 MS.gene38265:CDS 30.0%
TGTAACGGTTAAGTATAGTT+CGG - chr5.3:77857938-77857957 None:intergenic 30.0%
TTACAGATTCGAGAATAAAG+TGG - chr5.3:77855379-77855398 None:intergenic 30.0%
TTGACATCATTGTCTTTACA+GGG - chr5.3:77855674-77855693 None:intergenic 30.0%
TTGGAATTGCACTTCTATTA+GGG + chr5.3:77857116-77857135 MS.gene38265:CDS 30.0%
TTTATGCTACCTTATAGGAT+TGG + chr5.3:77855995-77856014 MS.gene38265:intron 30.0%
TTTCTTCAACTGTAAGTTGT+GGG - chr5.3:77856048-77856067 None:intergenic 30.0%
TTTGACATCATTGTCTTTAC+AGG - chr5.3:77855675-77855694 None:intergenic 30.0%
! AATACTTTTGAATTGCCCTT+AGG + chr5.3:77856512-77856531 MS.gene38265:intron 30.0%
! AGTAACCATTGACTAATTTC+TGG + chr5.3:77857332-77857351 MS.gene38265:intron 30.0%
! ATAGCTAGTTGAAGATGTTT+TGG - chr5.3:77856980-77856999 None:intergenic 30.0%
! CAGTTTTACCAAACTTGTAA+CGG - chr5.3:77857953-77857972 None:intergenic 30.0%
! CTTCTAAAAGTGCAATATTC+AGG + chr5.3:77858261-77858280 MS.gene38265:CDS 30.0%
! TGGACATCTTCATGTATTTT+TGG + chr5.3:77857390-77857409 MS.gene38265:CDS 30.0%
!! GATCTGAACATTTTAAGTCA+TGG + chr5.3:77857215-77857234 MS.gene38265:intron 30.0%
!! TGAACATTTTAAGTCATGGA+GGG + chr5.3:77857219-77857238 MS.gene38265:intron 30.0%
!! TTTAACCTTCTTTTAAGAGC+AGG - chr5.3:77855900-77855919 None:intergenic 30.0%
!!! AAAGATAGTTTTGGTTTGGT+AGG - chr5.3:77858027-77858046 None:intergenic 30.0%
!!! ACAATTTTAAAGGGTATCAC+AGG + chr5.3:77855738-77855757 MS.gene38265:CDS 30.0%
!!! GGTTTGAGTCATCTTATTTT+TGG - chr5.3:77855226-77855245 None:intergenic 30.0%
AAACTTCTTCTCACTCTTCA+AGG + chr5.3:77856423-77856442 MS.gene38265:CDS 35.0%
AAGAATTCTGCTGGATTCAT+TGG - chr5.3:77856696-77856715 None:intergenic 35.0%
AAGAATTTCATAGCCTATGC+TGG - chr5.3:77856340-77856359 None:intergenic 35.0%
AAGGCTCTCCTGTTTATTAT+GGG + chr5.3:77856616-77856635 MS.gene38265:CDS 35.0%
ACAACCTTGTTAAGAGTTGT+AGG + chr5.3:77855816-77855835 MS.gene38265:CDS 35.0%
ACATACCAAAGTTCATGCAA+TGG + chr5.3:77858199-77858218 MS.gene38265:CDS 35.0%
ACATCTTCAACTAGCTATTC+AGG + chr5.3:77856982-77857001 MS.gene38265:CDS 35.0%
ACTAGCTATTCAGGTCAAAA+AGG + chr5.3:77856991-77857010 MS.gene38265:CDS 35.0%
AGGCATTACTATCACATACA+TGG + chr5.3:77856838-77856857 MS.gene38265:intron 35.0%
ATAGTCCTGCTCTTAAAAGA+AGG + chr5.3:77855892-77855911 MS.gene38265:CDS 35.0%
ATGACTCAAACCCTTACTTT+AGG + chr5.3:77855234-77855253 MS.gene38265:intron 35.0%
ATGTTAAAGATTCTGCTGGA+TGG - chr5.3:77856570-77856589 None:intergenic 35.0%
ATGTTATTCCTTCTTACAGG+TGG + chr5.3:77857810-77857829 MS.gene38265:CDS 35.0%
ATTATAGTTCTTCCAGCCTA+AGG - chr5.3:77856531-77856550 None:intergenic 35.0%
CAAGACTCAGAACATGTTAA+AGG + chr5.3:77857656-77857675 MS.gene38265:intron 35.0%
CATGCTTATTGTGTACTTCA+TGG + chr5.3:77857548-77857567 MS.gene38265:CDS 35.0%
CATTCATGTACTATGGATTC+AGG + chr5.3:77858235-77858254 MS.gene38265:CDS 35.0%
CGCTTTCACATTCATATAGT+TGG - chr5.3:77858290-77858309 None:intergenic 35.0%
CTATATGAATGTGAAAGCGA+AGG + chr5.3:77858291-77858310 MS.gene38265:CDS 35.0%
CTATTCAGGTCAAAAAGGAA+TGG + chr5.3:77856996-77857015 MS.gene38265:CDS 35.0%
CTGCAAGACAAATCAATTCA+AGG - chr5.3:77858178-77858197 None:intergenic 35.0%
CTGGATTCATTGGTATTTCA+GGG - chr5.3:77856686-77856705 None:intergenic 35.0%
CTTGGAATTGCACTTCTATT+AGG + chr5.3:77857115-77857134 MS.gene38265:CDS 35.0%
GAAATCTTCAACCAATACAG+AGG + chr5.3:77857150-77857169 MS.gene38265:CDS 35.0%
GAGAATACTATCAAGGATCT+AGG + chr5.3:77856136-77856155 MS.gene38265:CDS 35.0%
GATACTGTAAACTTGAAAGG+TGG + chr5.3:77858348-77858367 MS.gene38265:CDS 35.0%
GATTGGATTTGTAACACAAG+AGG + chr5.3:77856012-77856031 MS.gene38265:CDS 35.0%
GCAATTATCAGCACATCATT+AGG - chr5.3:77855551-77855570 None:intergenic 35.0%
GGTTGCGCAAAAGATTATTT+AGG - chr5.3:77856248-77856267 None:intergenic 35.0%
GTTTCTTCAACTGTAAGTTG+TGG - chr5.3:77856049-77856068 None:intergenic 35.0%
TCACTACCTTGAGATATACA+GGG - chr5.3:77855097-77855116 None:intergenic 35.0%
TCTCTGAATACCTATTGTGA+AGG - chr5.3:77855028-77855047 None:intergenic 35.0%
TGATCTTCTCTGCATTCTTA+AGG + chr5.3:77856071-77856090 MS.gene38265:CDS 35.0%
TTATAGTTCTTCCAGCCTAA+GGG - chr5.3:77856530-77856549 None:intergenic 35.0%
TTCAACCATTGCATGAACTT+TGG - chr5.3:77858207-77858226 None:intergenic 35.0%
TTCACTACCTTGAGATATAC+AGG - chr5.3:77855098-77855117 None:intergenic 35.0%
TTCTCTTAGCTCGAGAATTA+AGG + chr5.3:77855162-77855181 MS.gene38265:intron 35.0%
! CATTGTCTTTACAGGGTTTT+TGG - chr5.3:77855667-77855686 None:intergenic 35.0%
! TAAAGATTCATCTGGAACCT+AGG + chr5.3:77857984-77858003 MS.gene38265:intron 35.0%
! TTTTTCTTGCTTGCTCATGT+TGG - chr5.3:77856104-77856123 None:intergenic 35.0%
!! AACATTTTAAGTCATGGAGG+GGG + chr5.3:77857221-77857240 MS.gene38265:intron 35.0%
!! CTGAACATTTTAAGTCATGG+AGG + chr5.3:77857218-77857237 MS.gene38265:intron 35.0%
!! CTTTTAAGAGCAGGACTATA+TGG - chr5.3:77855891-77855910 None:intergenic 35.0%
!! GAACATTTTAAGTCATGGAG+GGG + chr5.3:77857220-77857239 MS.gene38265:intron 35.0%
AAAAGGAATGGACAGTGAGT+TGG + chr5.3:77857008-77857027 MS.gene38265:CDS 40.0%
AAACATGGAGGCCTAAAGTA+AGG - chr5.3:77855248-77855267 None:intergenic 40.0%
AACATGGAGGCCTAAAGTAA+GGG - chr5.3:77855247-77855266 None:intergenic 40.0%
AAGGTGGCTTAAGTGAAGTT+TGG + chr5.3:77858364-77858383 MS.gene38265:CDS 40.0%
AAGTCAAGCAAGAATTCTGC+TGG - chr5.3:77856705-77856724 None:intergenic 40.0%
ACCTTAATAATCGCCACTGA+AGG - chr5.3:77856795-77856814 None:intergenic 40.0%
ACCTTGTTAAGAGTTGTAGG+AGG + chr5.3:77855819-77855838 MS.gene38265:CDS 40.0%
AGCAGAATTCTTGCTTGACT+TGG + chr5.3:77856704-77856723 MS.gene38265:CDS 40.0%
AGGTACTACTAGGTAGTTTC+AGG + chr5.3:77857188-77857207 MS.gene38265:intron 40.0%
AGTTTGGATTCTGATAGCCA+TGG + chr5.3:77858380-77858399 MS.gene38265:CDS 40.0%
ATAGGTGGAGGATATCTCAA+AGG + chr5.3:77856288-77856307 MS.gene38265:CDS 40.0%
ATCAAAGCAAGAATTTCGCC+GGG - chr5.3:77855774-77855793 None:intergenic 40.0%
ATGAATGTGAAAGCGAAGGA+GGG + chr5.3:77858295-77858314 MS.gene38265:CDS 40.0%
CACTTCTATTAGGGCTACTT+TGG + chr5.3:77857125-77857144 MS.gene38265:CDS 40.0%
CAGCATAGAATTCATGTCTC+AGG + chr5.3:77854998-77855017 MS.gene38265:CDS 40.0%
CAGTGGCGATTATTAAGGTA+GGG + chr5.3:77856796-77856815 MS.gene38265:intron 40.0%
CATCAAAGCAAGAATTTCGC+CGG - chr5.3:77855775-77855794 None:intergenic 40.0%
CCTTAATAATCGCCACTGAA+GGG - chr5.3:77856794-77856813 None:intergenic 40.0%
CTCTCCTGTTTATTATGGGA+AGG + chr5.3:77856620-77856639 MS.gene38265:CDS 40.0%
CTGCACCAGAAATTAGTCAA+TGG - chr5.3:77857340-77857359 None:intergenic 40.0%
CTTATTGTGTACTTCATGGC+TGG + chr5.3:77857552-77857571 MS.gene38265:CDS 40.0%
GAAGGCTCTCCTGTTTATTA+TGG + chr5.3:77856615-77856634 MS.gene38265:CDS 40.0%
GATGGATGACCACTTGATAT+TGG + chr5.3:77855475-77855494 MS.gene38265:intron 40.0%
GCTGGATTCATTGGTATTTC+AGG - chr5.3:77856687-77856706 None:intergenic 40.0%
GGCGAAATTCTTGCTTTGAT+GGG + chr5.3:77855774-77855793 MS.gene38265:CDS 40.0%
GGTACTACTAGGTAGTTTCA+GGG + chr5.3:77857189-77857208 MS.gene38265:intron 40.0%
GTTATGAGCATTCAAAGAGC+AGG + chr5.3:77857765-77857784 MS.gene38265:CDS 40.0%
TACCTAGTAGTACCTGATCT+CGG - chr5.3:77857183-77857202 None:intergenic 40.0%
TATGAATGTGAAAGCGAAGG+AGG + chr5.3:77858294-77858313 MS.gene38265:CDS 40.0%
TCAGTGGCGATTATTAAGGT+AGG + chr5.3:77856795-77856814 MS.gene38265:intron 40.0%
TCATCAAGTAGTAGCAGTGA+AGG - chr5.3:77856369-77856388 None:intergenic 40.0%
TCCTCCTACAACTCTTAACA+AGG - chr5.3:77855823-77855842 None:intergenic 40.0%
! AAGAAGTTTGTTTGCTGAGG+TGG - chr5.3:77856412-77856431 None:intergenic 40.0%
! CTAGCCTTCCCATAATAAAC+AGG - chr5.3:77856627-77856646 None:intergenic 40.0%
! GAGAAGAAGTTTGTTTGCTG+AGG - chr5.3:77856415-77856434 None:intergenic 40.0%
! GGATATCTCAAAGGCATATC+AGG + chr5.3:77856297-77856316 MS.gene38265:CDS 40.0%
! TATCTCAAAGGCATATCAGG+AGG + chr5.3:77856300-77856319 MS.gene38265:CDS 40.0%
! TTCTATTAGGGCTACTTTGG+TGG + chr5.3:77857128-77857147 MS.gene38265:CDS 40.0%
! TTGAGATTGGTTCAAGCACT+TGG + chr5.3:77857097-77857116 MS.gene38265:CDS 40.0%
!! AGAGATTGACATTCGAGTTG+AGG + chr5.3:77855043-77855062 MS.gene38265:CDS 40.0%
!! CATTGACTAATTTCTGGTGC+AGG + chr5.3:77857338-77857357 MS.gene38265:intron 40.0%
!!! TTTTGTTGTTAATAGGGGGC+AGG + chr5.3:77857723-77857742 MS.gene38265:intron 40.0%
AAAGCTTCCTGCAATCTGCA+TGG - chr5.3:77854973-77854992 None:intergenic 45.0%
AAGCAGCACTCTATGTGACA+TGG + chr5.3:77857497-77857516 MS.gene38265:CDS 45.0%
AAGGCATATCAGGAGGAGAA+AGG + chr5.3:77856307-77856326 MS.gene38265:CDS 45.0%
ACCTTGAGATATACAGGGAG+AGG - chr5.3:77855092-77855111 None:intergenic 45.0%
AGATGTCGCCACACGAAAAT+AGG + chr5.3:77856270-77856289 MS.gene38265:intron 45.0%
ATCTGCATGGAACCAACAGA+TGG - chr5.3:77854960-77854979 None:intergenic 45.0%
ATGCAGATTGCAGGAAGCTT+TGG + chr5.3:77854972-77854991 MS.gene38265:CDS 45.0%
CAATAGAGTCGAGTGTCTTC+AGG + chr5.3:77855194-77855213 MS.gene38265:intron 45.0%
CATAGTAGCCACCTGTAAGA+AGG - chr5.3:77857821-77857840 None:intergenic 45.0%
CCCTTCAGTGGCGATTATTA+AGG + chr5.3:77856791-77856810 MS.gene38265:CDS 45.0%
CCTTGAGATATACAGGGAGA+GGG - chr5.3:77855091-77855110 None:intergenic 45.0%
CGGCGAAATTCTTGCTTTGA+TGG + chr5.3:77855773-77855792 MS.gene38265:CDS 45.0%
CTACTAGGTAGTTTCAGGGA+CGG + chr5.3:77857193-77857212 MS.gene38265:intron 45.0%
CTACTTGATGAGCCAACTTC+AGG + chr5.3:77856378-77856397 MS.gene38265:CDS 45.0%
CTCAGGCATACCTTCACAAT+AGG + chr5.3:77855015-77855034 MS.gene38265:CDS 45.0%
CTTGAGATATACAGGGAGAG+GGG - chr5.3:77855090-77855109 None:intergenic 45.0%
GAAAGGAAGAGAACCAGCAT+AGG + chr5.3:77856324-77856343 MS.gene38265:CDS 45.0%
GAGCATTCAAAGAGCAGGAA+TGG + chr5.3:77857770-77857789 MS.gene38265:CDS 45.0%
GCTACTTCTTTGTGCATACC+TGG - chr5.3:77857845-77857864 None:intergenic 45.0%
GTGGAATCAAGACCTGAAGT+TGG - chr5.3:77856393-77856412 None:intergenic 45.0%
GTTGTCTTTCCACTACCAGA+AGG - chr5.3:77855801-77855820 None:intergenic 45.0%
GTTTGGTAGGACAACTGAAC+TGG - chr5.3:77858014-77858033 None:intergenic 45.0%
TAAAGATTCTGCTGGATGGC+TGG - chr5.3:77856566-77856585 None:intergenic 45.0%
TAGCCATGGCTCTTTGCTTT+CGG + chr5.3:77858394-77858413 MS.gene38265:CDS 45.0%
TATTTCAGGGACGAACCTCA+AGG - chr5.3:77856673-77856692 None:intergenic 45.0%
TCAAAGCAAGAATTTCGCCG+GGG - chr5.3:77855773-77855792 None:intergenic 45.0%
TCAAGGATCTAGGCCTAGAA+AGG + chr5.3:77856146-77856165 MS.gene38265:CDS 45.0%
TCAATGTCACCTCCATCTGT+TGG + chr5.3:77854945-77854964 MS.gene38265:CDS 45.0%
TCTTGCTTGCTCATGTTGGT+TGG - chr5.3:77856100-77856119 None:intergenic 45.0%
TGCTAGACACACACCTTTCT+AGG - chr5.3:77856162-77856181 None:intergenic 45.0%
TGGAGGTGACATTGACATGT+TGG - chr5.3:77854940-77854959 None:intergenic 45.0%
TGTGAGAGAGGATGAGATTG+AGG + chr5.3:77854914-77854933 MS.gene38265:CDS 45.0%
TTCATCGCTCGGTTTAGGAA+GGG + chr5.3:77857909-77857928 MS.gene38265:intron 45.0%
TTGAGATATACAGGGAGAGG+GGG - chr5.3:77855089-77855108 None:intergenic 45.0%
! AGAAAGGTGTGTGTCTAGCA+TGG + chr5.3:77856162-77856181 MS.gene38265:intron 45.0%
! ATCCTCCACCTATTTTCGTG+TGG - chr5.3:77856281-77856300 None:intergenic 45.0%
! CACTCTTCAAGGACTAGCAA+AGG + chr5.3:77856434-77856453 MS.gene38265:CDS 45.0%
! CTTTTGAATTGCCCTTAGGC+TGG + chr5.3:77856516-77856535 MS.gene38265:intron 45.0%
! TTTGTGGACTGTTCATCGCT+CGG + chr5.3:77857898-77857917 MS.gene38265:intron 45.0%
! TTTTCGTGTGGCGACATCTA+TGG - chr5.3:77856269-77856288 None:intergenic 45.0%
!! AAGGGTATCACAGGAAGCAT+TGG + chr5.3:77855747-77855766 MS.gene38265:CDS 45.0%
!! CAGGGTTTTTGGAAGCTGTT+TGG - chr5.3:77855656-77855675 None:intergenic 45.0%
!! CGGAGTACTTTTCATCCTTG+AGG + chr5.3:77856655-77856674 MS.gene38265:CDS 45.0%
!! GACTAATTTCTGGTGCAGGT+TGG + chr5.3:77857342-77857361 MS.gene38265:intron 45.0%
!! TTCTTGCTTGACTTGGCAAC+TGG + chr5.3:77856711-77856730 MS.gene38265:CDS 45.0%
ACAACTGAACTGGTGCACCT+AGG - chr5.3:77858004-77858023 None:intergenic 50.0%
AGAATCCACTGACCCTTCAG+TGG + chr5.3:77856779-77856798 MS.gene38265:CDS 50.0%
AGGGGGATCTTGGTTGAAAC+TGG - chr5.3:77855072-77855091 None:intergenic 50.0%
CAGCACTCTATGTGACATGG+TGG + chr5.3:77857500-77857519 MS.gene38265:CDS 50.0%
CCCTCTCCCTGTATATCTCA+AGG + chr5.3:77855088-77855107 MS.gene38265:CDS 50.0%
CTCCGAGATCAGGTACTACT+AGG + chr5.3:77857178-77857197 MS.gene38265:intron 50.0%
GAACCGAAAGCAAAGAGCCA+TGG - chr5.3:77858400-77858419 None:intergenic 50.0%
GACTGTTCATCGCTCGGTTT+AGG + chr5.3:77857904-77857923 MS.gene38265:intron 50.0%
GAGTCGAGTGTCTTCAGGAT+TGG + chr5.3:77855199-77855218 MS.gene38265:intron 50.0%
GGCTCTTTGCTTTCGGTTCT+TGG + chr5.3:77858401-77858420 MS.gene38265:CDS 50.0%
GTTCATCGCTCGGTTTAGGA+AGG + chr5.3:77857908-77857927 MS.gene38265:intron 50.0%
TACAGGTGGCTACTATGTCC+AGG + chr5.3:77857824-77857843 MS.gene38265:CDS 50.0%
TAGGGGGCAGGAGAACTATT+TGG + chr5.3:77857735-77857754 MS.gene38265:intron 50.0%
TCGGAGTTGAGCCTCTGTAT+TGG - chr5.3:77857164-77857183 None:intergenic 50.0%
TGCATGGAACCAACAGATGG+AGG - chr5.3:77854957-77854976 None:intergenic 50.0%
TGTCGCCACACGAAAATAGG+TGG + chr5.3:77856273-77856292 MS.gene38265:CDS 50.0%
! CTTGCTTTGATGGGTCCTTC+TGG + chr5.3:77855783-77855802 MS.gene38265:CDS 50.0%
! GTTGGTTCCATGCAGATTGC+AGG + chr5.3:77854963-77854982 MS.gene38265:CDS 50.0%
! TTGATGGGTCCTTCTGGTAG+TGG + chr5.3:77855789-77855808 MS.gene38265:CDS 50.0%
AATCGCCACTGAAGGGTCAG+TGG - chr5.3:77856787-77856806 None:intergenic 55.0%
AGAGGCTCAACTCCGAGATC+AGG + chr5.3:77857168-77857187 MS.gene38265:CDS 55.0%
ATACAGGGAGAGGGGGATCT+TGG - chr5.3:77855082-77855101 None:intergenic 55.0%
CGCCACACGAAAATAGGTGG+AGG + chr5.3:77856276-77856295 MS.gene38265:CDS 55.0%
!! ATCACAGGAAGCATTGGCCC+CGG + chr5.3:77855753-77855772 MS.gene38265:CDS 55.0%
!! GGCTGGCTTTAAGAGCACTG+CGG + chr5.3:77857569-77857588 MS.gene38265:CDS 55.0%
TGGGAAGGCTAGCGACACAG+CGG + chr5.3:77856635-77856654 MS.gene38265:CDS 60.0%
! GTGAAAGCGAAGGAGGGTGC+AGG + chr5.3:77858301-77858320 MS.gene38265:CDS 60.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 77854906 77858458 77854906 ID=MS.gene38265
chr5.3 mRNA 77854906 77858458 77854906 ID=MS.gene38265.t1;Parent=MS.gene38265
chr5.3 exon 77854906 77855109 77854906 ID=MS.gene38265.t1.exon1;Parent=MS.gene38265.t1
chr5.3 CDS 77854906 77855109 77854906 ID=cds.MS.gene38265.t1;Parent=MS.gene38265.t1
chr5.3 exon 77855621 77855913 77855621 ID=MS.gene38265.t1.exon2;Parent=MS.gene38265.t1
chr5.3 CDS 77855621 77855913 77855621 ID=cds.MS.gene38265.t1;Parent=MS.gene38265.t1
chr5.3 exon 77856012 77856167 77856012 ID=MS.gene38265.t1.exon3;Parent=MS.gene38265.t1
chr5.3 CDS 77856012 77856167 77856012 ID=cds.MS.gene38265.t1;Parent=MS.gene38265.t1
chr5.3 exon 77856272 77856455 77856272 ID=MS.gene38265.t1.exon4;Parent=MS.gene38265.t1
chr5.3 CDS 77856272 77856455 77856272 ID=cds.MS.gene38265.t1;Parent=MS.gene38265.t1
chr5.3 exon 77856534 77856812 77856534 ID=MS.gene38265.t1.exon5;Parent=MS.gene38265.t1
chr5.3 CDS 77856534 77856812 77856534 ID=cds.MS.gene38265.t1;Parent=MS.gene38265.t1
chr5.3 exon 77856905 77857189 77856905 ID=MS.gene38265.t1.exon6;Parent=MS.gene38265.t1
chr5.3 CDS 77856905 77857189 77856905 ID=cds.MS.gene38265.t1;Parent=MS.gene38265.t1
chr5.3 exon 77857360 77857644 77857360 ID=MS.gene38265.t1.exon7;Parent=MS.gene38265.t1
chr5.3 CDS 77857360 77857644 77857360 ID=cds.MS.gene38265.t1;Parent=MS.gene38265.t1
chr5.3 exon 77857738 77857845 77857738 ID=MS.gene38265.t1.exon8;Parent=MS.gene38265.t1
chr5.3 CDS 77857738 77857845 77857738 ID=cds.MS.gene38265.t1;Parent=MS.gene38265.t1
chr5.3 exon 77858198 77858458 77858198 ID=MS.gene38265.t1.exon9;Parent=MS.gene38265.t1
chr5.3 CDS 77858198 77858458 77858198 ID=cds.MS.gene38265.t1;Parent=MS.gene38265.t1
Gene Sequence

>MS.gene38265

ATGGAAAATGTGAGAGAGGATGAGATTGAGGCCAACATGTCAATGTCACCTCCATCTGTTGGTTCCATGCAGATTGCAGGAAGCTTTGGTCACAGCATAGAATTCATGTCTCAGGCATACCTTCACAATAGGTATTCAGAGATTGACATTCGAGTTGAGGAATCCAGTTTCAACCAAGATCCCCCTCTCCCTGTATATCTCAAGGTAGTGAACAATTAGAGCAAAATATTAAGTTTATCAGAAATCAAAGTTCTTTTTCTCTTAGCTCGAGAATTAAGGTTCTTCGTGCAATAGAGTCGAGTGTCTTCAGGATTGGTCCAAAAATAAGATGACTCAAACCCTTACTTTAGGCCTCCATGTTTTTCTTTAAACTTTAAAGATATATGTTAAATTAGATAAATCTGAGGATTTGTGAATTTGAGAAAAAGTATTAACCAGATTCAGATATATTCTTAACATGATTTTATTTTCCACTTTATTCTCGAATCTGTAAGTACTTAAATGACATTATACCTGCACTTATATTTGTTTTGATTTTTCAAAACTCCTTTTAGCATTCAAAATGATTTGATGGATGACCACTTGATATTGGAAACTGAATTCAAGAGTCAATGAGAATATTATCACCGACATTGTTTTGTTCCTAATGATGTGCTGATAATTGCTTCACTTGATCACATTCTCAATAATAGACAATTTCTCATTTAATGTGCAGTTTGAAGATGTAGAGTTCAAAGTGAGAAATAGCCAAACAGCTTCCAAAAACCCTGTAAAGACAATGATGTCAAAGGTAGCAACACAACACCATGTAGAAGAAAATAACAAATACAAGACAATTTTAAAGGGTATCACAGGAAGCATTGGCCCCGGCGAAATTCTTGCTTTGATGGGTCCTTCTGGTAGTGGAAAGACAACCTTGTTAAGAGTTGTAGGAGGAAGATTACTTGATAATGTAAAGGGAAAGATATCTTACAATGATGTTCCATATAGTCCTGCTCTTAAAAGAAGGTTAAACATCTTGTTAGAACATCAGCATCTATGACTCAATGTGTGAATATGTGCTAACAATGTACTTTAATGTCTCTCTCATTTATGCTACCTTATAGGATTGGATTTGTAACACAAGAGGATGTTCTTTTCCCACAACTTACAGTTGAAGAAACATTGATCTTCTCTGCATTCTTAAGGCTACCAACCAACATGAGCAAGCAAGAAAAATATGCAAGAGTTGAGAATACTATCAAGGATCTAGGCCTAGAAAGGTGTGTGTCTAGCATGGATCAAAATTTGACGTAAAATATGATTATTGAATACTCAAATAAAGAAATTAAACTGTTTTCCTAAATAATCTTTTGCGCAACCATAGATGTCGCCACACGAAAATAGGTGGAGGATATCTCAAAGGCATATCAGGAGGAGAAAGGAAGAGAACCAGCATAGGCTATGAAATTCTTGTTGAGCCTTCACTGCTACTACTTGATGAGCCAACTTCAGGTCTTGATTCCACCTCAGCAAACAAACTTCTTCTCACTCTTCAAGGACTAGCAAAGGTATCAGAAACTAAATTTAACTCATTTTGATAACATGTTTTGAACATATGCTGAAAAATACTTTTGAATTGCCCTTAGGCTGGAAGAACTATAATCACAACAATTCACCAGCCATCCAGCAGAATCTTTAACATGTTTGACAAACTTCTTCTGATATCAGAAGGCTCTCCTGTTTATTATGGGAAGGCTAGCGACACAGCGGAGTACTTTTCATCCTTGAGGTTCGTCCCTGAAATACCAATGAATCCAGCAGAATTCTTGCTTGACTTGGCAACTGGACAAGTGAATGATATAAGTATTCCACAAGATATTTTGAAAGATGAAGAATCCACTGACCCTTCAGTGGCGATTATTAAGGTAGGGTTAATCGTAATTTATTTATAGGCATTACTATCACATACATGGTCTATTTCATTCTCAACTTAATAATTGTTTATTTATCATGTTAGTATCTACAACTCAAGTATAAAGACATTTTGGAGCCGAAAGAAAAAGAAGAGAATCATAGAGGAGCAAACACACCAAAACATCTTCAACTAGCTATTCAGGTCAAAAAGGAATGGACAGTGAGTTGGTTAGACCAATTCACCATTCTTTATAAGAGAACATATAGAGCAAGATTCAAGGAATATTTTGATATATTGAGATTGGTTCAAGCACTTGGAATTGCACTTCTATTAGGGCTACTTTGGTGGAAATCTTCAACCAATACAGAGGCTCAACTCCGAGATCAGGTACTACTAGGTAGTTTCAGGGACGGATCTGAACATTTTAAGTCATGGAGGGGGCAATTTACATATAAATTTATAGCATATATATCATTTTTAAAAAACATAAATATGCATCATAATTGTTCTAAACAATTTTGAAATTTTCAGTAACCATTGACTAATTTCTGGTGCAGGTTGGTTTAATGTTCTACATTTGCATATTTTGGACATCTTCATGTATTTTTGGAGCAGTCTATGTATTTCCATTTGAAAAGGTATACTTAAGAAAAGAAAGGAAAGCAGATATGTATAGACTTAGTGTGTACTATGCAAGCAGCACTCTATGTGACATGGTGGCACATGTTTTGTATCCTACTGTTTTCATGCTTATTGTGTACTTCATGGCTGGCTTTAAGAGCACTGCGGCTTGCTTCTTCCTTACGTTATTTTCAGTTTTGCTAATTGCTATCACAAGTCAAGTAAGTTATGTCAAGACTCAGAACATGTTAAAGGGTAATAATTTGTTTAAAAGTAGCTCTAATGAATATCCCTGTTGTTTTTGTTGTTAATAGGGGGCAGGAGAACTATTTGGAGCTGCAGTTATGAGCATTCAAAGAGCAGGAATGGTTGCTTCTTTGATACTTATGTTATTCCTTCTTACAGGTGGCTACTATGTCCAGGTATGCACAAAGAAGTAGCAAGTAGAAGCAATGCTAGTTAAACATATATATCTTTGTGGACTGTTCATCGCTCGGTTTAGGAAGGGAAACCGAACTATACTTAACCGTTACAAGTTTGGTAAAACTGAACCGAAATGTTAAAGATTCATCTGGAACCTAGGTGCACCAGTTCAGTTGTCCTACCAAACCAAAACTATCTTTACATAAAACTGAATTATACGAATTAGGATTGTTATAAAAACAAAAACTTAACCAAACCAAATATTATGACTATTAAAAAAATCAAAAATTGCACTGTTAAACTAAACCAAAAAGACGATACTTAAAAACCTTGAATTGATTTGTCTTGCAGCACATACCAAAGTTCATGCAATGGTTGAAGTACATGTCATTCATGTACTATGGATTCAGGCTTCTTCTAAAAGTGCAATATTCAGGAGACCAACTATATGAATGTGAAAGCGAAGGAGGGTGCAGGACACTTCAAAGTTCACCTTCATTTGATACTGTAAACTTGAAAGGTGGCTTAAGTGAAGTTTGGATTCTGATAGCCATGGCTCTTTGCTTTCGGTTCTTGGCTTACTTTTGTCTACGCAGAAAGATTGATGTATGA
Protein sequence

>MS.gene38265.t1

MENVREDEIEANMSMSPPSVGSMQIAGSFGHSIEFMSQAYLHNRYSEIDIRVEESSFNQDPPLPVYLKFEDVEFKVRNSQTASKNPVKTMMSKVATQHHVEENNKYKTILKGITGSIGPGEILALMGPSGSGKTTLLRVVGGRLLDNVKGKISYNDVPYSPALKRRIGFVTQEDVLFPQLTVEETLIFSAFLRLPTNMSKQEKYARVENTIKDLGLERCRHTKIGGGYLKGISGGERKRTSIGYEILVEPSLLLLDEPTSGLDSTSANKLLLTLQGLAKAGRTIITTIHQPSSRIFNMFDKLLLISEGSPVYYGKASDTAEYFSSLRFVPEIPMNPAEFLLDLATGQVNDISIPQDILKDEESTDPSVAIIKYLQLKYKDILEPKEKEENHRGANTPKHLQLAIQVKKEWTVSWLDQFTILYKRTYRARFKEYFDILRLVQALGIALLLGLLWWKSSTNTEAQLRDQVGLMFYICIFWTSSCIFGAVYVFPFEKVYLRKERKADMYRLSVYYASSTLCDMVAHVLYPTVFMLIVYFMAGFKSTAACFFLTLFSVLLIAITSQGAGELFGAAVMSIQRAGMVASLILMLFLLTGGYYVQHIPKFMQWLKYMSFMYYGFRLLLKVQYSGDQLYECESEGGCRTLQSSPSFDTVNLKGGLSEVWILIAMALCFRFLAYFCLRRKIDV