Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38552.t1 | XP_003599303.2 | 95.3 | 359 | 17 | 0 | 1 | 359 | 22 | 380 | 2.30E-184 | 654.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38552.t1 | P71019 | 41.0 | 295 | 164 | 4 | 57 | 350 | 5 | 290 | 2.7e-53 | 210.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38552.t1 | G7J0N6 | 95.3 | 359 | 17 | 0 | 1 | 359 | 22 | 380 | 1.6e-184 | 654.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene074258 | MS.gene38552 | PPI |
| MS.gene76034 | MS.gene38552 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38552.t1 | MTR_3g031380 | 95.211 | 355 | 17 | 0 | 5 | 359 | 26 | 380 | 0.0 | 695 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38552.t1 | AT2G30200 | 81.105 | 344 | 64 | 1 | 17 | 359 | 50 | 393 | 0.0 | 557 |
| MS.gene38552.t1 | AT2G30200 | 80.405 | 296 | 57 | 1 | 17 | 311 | 50 | 345 | 8.10e-169 | 475 |
Find 109 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGCGTTTGCTGGGGCTTTC+AGG | 0.094720 | 3.4:+61227269 | MS.gene38552:CDS |
| CAAGAAAGCCAATGAGATTT+TGG | 0.134267 | 3.4:+61225662 | MS.gene38552:CDS |
| CTTCTTGATGTATGCATTAA+TGG | 0.181932 | 3.4:+61225782 | MS.gene38552:CDS |
| TATACTGCTCTGGCGTTTGC+TGG | 0.229112 | 3.4:+61227259 | MS.gene38552:CDS |
| GTGGCCAAAACCCTAGATTT+AGG | 0.242064 | 3.4:-61225406 | None:intergenic |
| AATATCTTCTTTATTGTGTC+AGG | 0.273256 | 3.4:-61228516 | None:intergenic |
| CAGGTGCGCCTGGCTGTTGC+AGG | 0.273267 | 3.4:+61228369 | MS.gene38552:intron |
| CGTAAACTTTCTACCTTTCC+AGG | 0.283273 | 3.4:-61228705 | None:intergenic |
| TAAGAGTGTGGGTTCGATTT+GGG | 0.294147 | 3.4:-61225369 | None:intergenic |
| CCCACAATTTCCCTAAATCT+AGG | 0.310590 | 3.4:+61225395 | MS.gene38552:CDS |
| TTTCCCTAAATCTAGGGTTT+TGG | 0.315442 | 3.4:+61225402 | MS.gene38552:CDS |
| CCTTACTGGACATAGGTAAT+TGG | 0.315959 | 3.4:-61228092 | None:intergenic |
| CTTTGAAGATGGACTGAAAT+TGG | 0.319783 | 3.4:+61227810 | MS.gene38552:CDS |
| AGCTTCAGGCACTTCCTGAT+TGG | 0.338484 | 3.4:-61228053 | None:intergenic |
| GCTGTCTCTGGAGGCATAAA+AGG | 0.342232 | 3.4:+61228222 | MS.gene38552:CDS |
| ATCTGAACCTTCTCAGCTTC+AGG | 0.348175 | 3.4:-61228067 | None:intergenic |
| TGGAAATGACTGGTATTCTT+GGG | 0.360068 | 3.4:-61228467 | None:intergenic |
| CTCATGGTGGCAGGTGCGCC+TGG | 0.360470 | 3.4:+61228359 | MS.gene38552:intron |
| TGCTGCTGTTGAGCTACTTC+GGG | 0.360693 | 3.4:+61227171 | MS.gene38552:CDS |
| TTCTTGATGTATGCATTAAT+GGG | 0.361976 | 3.4:+61225783 | MS.gene38552:CDS |
| TTGGAAATGACTGGTATTCT+TGG | 0.363800 | 3.4:-61228468 | None:intergenic |
| TGGACTCTTCAGGTTATTGC+TGG | 0.367068 | 3.4:+61228803 | MS.gene38552:intron |
| GCTGAAGAAAAGCTATGAAT+TGG | 0.370795 | 3.4:+61228680 | MS.gene38552:CDS |
| GTTCGATTTGGGAAGAAGAT+AGG | 0.378013 | 3.4:-61225358 | None:intergenic |
| TTAAGAGTGTGGGTTCGATT+TGG | 0.379313 | 3.4:-61225370 | None:intergenic |
| ACTGTTGTTTCCCATTGAAC+AGG | 0.383548 | 3.4:-61228636 | None:intergenic |
| CCGGTTCCATAAAACTAGTA+TGG | 0.383743 | 3.4:-61228398 | None:intergenic |
| CCCTAGATTTAGGGAAATTG+TGG | 0.390240 | 3.4:-61225396 | None:intergenic |
| AATCAGCTACAGAAGCTTCA+TGG | 0.391257 | 3.4:-61225456 | None:intergenic |
| TGGCCAAAACCCTAGATTTA+GGG | 0.391319 | 3.4:-61225405 | None:intergenic |
| TCCAATGCGTTTCTCTTCCC+TGG | 0.402326 | 3.4:+61225487 | MS.gene38552:CDS |
| TGCTGGAATTGTCAAAAGAA+TGG | 0.402849 | 3.4:+61228820 | MS.gene38552:CDS |
| ATACTGCTCTGGCGTTTGCT+GGG | 0.405436 | 3.4:+61227260 | MS.gene38552:CDS |
| TGCGTTTCTCTTCCCTGGTC+AGG | 0.406940 | 3.4:+61225492 | MS.gene38552:CDS |
| TGACACAATAAAGAAGATAT+TGG | 0.409601 | 3.4:+61228518 | MS.gene38552:CDS |
| AAAGAAGATATTGGCACAAC+AGG | 0.412880 | 3.4:+61228527 | MS.gene38552:CDS |
| GTTTCATGTGGTTTGAGCTT+AGG | 0.423256 | 3.4:+61227232 | MS.gene38552:CDS |
| TTGCTGCTGTTGAGCTACTT+CGG | 0.426896 | 3.4:+61227170 | MS.gene38552:CDS |
| CAGCAAGACTTGTGACATAC+AGG | 0.430360 | 3.4:-61227153 | None:intergenic |
| GTTGTGTGATGCAGCCAATC+AGG | 0.434474 | 3.4:+61228039 | MS.gene38552:CDS |
| TTCGATTTGGGAAGAAGATA+GGG | 0.435124 | 3.4:-61225357 | None:intergenic |
| GACTGAAATTGGTGAAACTA+AGG | 0.439212 | 3.4:+61227821 | MS.gene38552:CDS |
| AGGTTACTTACCCTGTTCAA+TGG | 0.439364 | 3.4:+61228625 | MS.gene38552:intron |
| TGGCTGCATCACACAACTGC+TGG | 0.441780 | 3.4:-61228033 | None:intergenic |
| AGCCTTGAAAGACTTCGCTT+TGG | 0.442255 | 3.4:-61228262 | None:intergenic |
| CCACAATTTCCCTAAATCTA+GGG | 0.450894 | 3.4:+61225396 | MS.gene38552:CDS |
| TAAATACCCCAAAATCTCAT+TGG | 0.463483 | 3.4:-61225670 | None:intergenic |
| GGTTACTTACCCTGTTCAAT+GGG | 0.466160 | 3.4:+61228626 | MS.gene38552:intron |
| TAGGGAAACTATGCTGTCTC+TGG | 0.470485 | 3.4:+61228210 | MS.gene38552:intron |
| CCTAGATTTAGGGAAATTGT+GGG | 0.484174 | 3.4:-61225395 | None:intergenic |
| ATATCTTCTTTATTGTGTCA+GGG | 0.486151 | 3.4:-61228515 | None:intergenic |
| GGAACCGGCAGTGTCAAGAT+TGG | 0.492463 | 3.4:+61228413 | MS.gene38552:CDS |
| GCTTCCAATCTTGACACTGC+CGG | 0.502078 | 3.4:-61228417 | None:intergenic |
| CTGAAGAAAAGCTATGAATT+GGG | 0.506499 | 3.4:+61228681 | MS.gene38552:CDS |
| AGCCAAAGCGAAGTCTTTCA+AGG | 0.506804 | 3.4:+61228260 | MS.gene38552:CDS |
| GGAAAGCGCCTGCAACAGCC+AGG | 0.507270 | 3.4:-61228377 | None:intergenic |
| CTATGAATTGGGACCTGGAA+AGG | 0.507524 | 3.4:+61228692 | MS.gene38552:CDS |
| GGTGCACAAGCTGTTGGAAT+GGG | 0.510482 | 3.4:+61225600 | MS.gene38552:CDS |
| CGATTTGTAAGCTTTGAAGA+TGG | 0.513263 | 3.4:+61227799 | MS.gene38552:intron |
| TGCGGAAAATATACCTGACC+AGG | 0.515702 | 3.4:-61225505 | None:intergenic |
| CTTAGGAGAGTATACTGCTC+TGG | 0.517475 | 3.4:+61227249 | MS.gene38552:CDS |
| GAATTCAACAGTTATCAGTC+AGG | 0.518626 | 3.4:+61225820 | MS.gene38552:CDS |
| ACTAAGGGGTGAAGCCATGC+AGG | 0.520103 | 3.4:+61227837 | MS.gene38552:CDS |
| GCATTTACGTTGGAAATGAC+TGG | 0.530559 | 3.4:-61228477 | None:intergenic |
| ATTGTGTCAGGGTCTGTATG+TGG | 0.531264 | 3.4:-61228504 | None:intergenic |
| TCTTGGGGTTCTAATGTCTG+TGG | 0.536650 | 3.4:-61228451 | None:intergenic |
| TGAGCTACTTCGGGCACGTG+AGG | 0.538884 | 3.4:+61227180 | MS.gene38552:CDS |
| GGAAGTGCCTGAAGCTGAGA+AGG | 0.545626 | 3.4:+61228060 | MS.gene38552:CDS |
| ACCAGGGAAGAGAAACGCAT+TGG | 0.546499 | 3.4:-61225488 | None:intergenic |
| TCGATTTGGGAAGAAGATAG+GGG | 0.547419 | 3.4:-61225356 | None:intergenic |
| GGAAATGACTGGTATTCTTG+GGG | 0.548400 | 3.4:-61228466 | None:intergenic |
| TACTGCTCTGGCGTTTGCTG+GGG | 0.549969 | 3.4:+61227261 | MS.gene38552:CDS |
| AAAAGCTATGAATTGGGACC+TGG | 0.554297 | 3.4:+61228687 | MS.gene38552:CDS |
| CATGGTTAGTGTGGTAGGAC+TGG | 0.554574 | 3.4:+61227997 | MS.gene38552:CDS |
| GGTGCCATGGTTAGTGTGGT+AGG | 0.555350 | 3.4:+61227992 | MS.gene38552:CDS |
| CATAAAAGGAATAGAAGTGG+TGG | 0.563259 | 3.4:+61228236 | MS.gene38552:CDS |
| GTGAAGACTCTTCTATCCAA+GGG | 0.563734 | 3.4:+61228657 | MS.gene38552:CDS |
| TTGTACAAAACTGCAGCAGA+AGG | 0.572446 | 3.4:-61225642 | None:intergenic |
| CTGTTGTTTCCCATTGAACA+GGG | 0.572523 | 3.4:-61228635 | None:intergenic |
| GAGCTACTTCGGGCACGTGA+GGG | 0.576524 | 3.4:+61227181 | MS.gene38552:CDS |
| GATTCTGTTGATGTTTCATG+TGG | 0.577223 | 3.4:+61227220 | MS.gene38552:CDS |
| AGCTACAGAAGCTTCATGGA+TGG | 0.577351 | 3.4:-61225452 | None:intergenic |
| CTACTTCGGGCACGTGAGGG+AGG | 0.580356 | 3.4:+61227184 | MS.gene38552:CDS |
| AGTGAAGACTCTTCTATCCA+AGG | 0.584582 | 3.4:+61228656 | MS.gene38552:CDS |
| GGGTGCACAAGCTGTTGGAA+TGG | 0.590984 | 3.4:+61225599 | MS.gene38552:intron |
| GAAGTCTTTCAAGGCTCGAA+TGG | 0.594481 | 3.4:+61228269 | MS.gene38552:CDS |
| TCAAGAACCTTACTGGACAT+AGG | 0.602304 | 3.4:-61228099 | None:intergenic |
| TAAAGGTGCCATGGTTAGTG+TGG | 0.602685 | 3.4:+61227988 | MS.gene38552:CDS |
| TTGTAGGGTGCACAAGCTGT+TGG | 0.608275 | 3.4:+61225594 | MS.gene38552:intron |
| TTGAGATCCAGTGGAGATGG+TGG | 0.613121 | 3.4:-61225425 | None:intergenic |
| GATGGAAGATTGAGATCCAG+TGG | 0.616510 | 3.4:-61225434 | None:intergenic |
| GATGCTGCTGATGCTACTAA+AGG | 0.624615 | 3.4:+61227971 | MS.gene38552:CDS |
| AGACTTGTGACATACAGGGC+AGG | 0.626537 | 3.4:-61227148 | None:intergenic |
| GGAAACTATGCTGTCTCTGG+AGG | 0.631276 | 3.4:+61228213 | MS.gene38552:CDS |
| AGATTGAGATCCAGTGGAGA+TGG | 0.632101 | 3.4:-61225428 | None:intergenic |
| GGTAGGACTGGACTCAGAGA+AGG | 0.637373 | 3.4:+61228009 | MS.gene38552:CDS |
| TGATGCTACTAAAGGTGCCA+TGG | 0.641755 | 3.4:+61227979 | MS.gene38552:CDS |
| AGCAAGACTTGTGACATACA+GGG | 0.652472 | 3.4:-61227152 | None:intergenic |
| ACTACCACAGATTACCTGCA+TGG | 0.656968 | 3.4:-61227851 | None:intergenic |
| CAGTCCTACCACACTAACCA+TGG | 0.663013 | 3.4:-61227996 | None:intergenic |
| TGTATGCATTAATGGGCCGA+AGG | 0.664486 | 3.4:+61225790 | MS.gene38552:CDS |
| GGTGCTGATATTGAAAACAT+CGG | 0.665514 | 3.4:+61228848 | MS.gene38552:CDS |
| CTGAAATTGGTGAAACTAAG+GGG | 0.669315 | 3.4:+61227823 | MS.gene38552:CDS |
| AGGCATAAAAGGAATAGAAG+TGG | 0.682105 | 3.4:+61228233 | MS.gene38552:CDS |
| ATTGTCAAAAGAATGGACAA+AGG | 0.682335 | 3.4:+61228827 | MS.gene38552:CDS |
| ACTGAAATTGGTGAAACTAA+GGG | 0.694892 | 3.4:+61227822 | MS.gene38552:CDS |
| GCGGAAAATATACCTGACCA+GGG | 0.695587 | 3.4:-61225504 | None:intergenic |
| TGAAGACTCTTCTATCCAAG+GGG | 0.710603 | 3.4:+61228658 | MS.gene38552:CDS |
| ATGTGGCAGAGCATTTACGT+TGG | 0.714429 | 3.4:-61228487 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAGAAAAATATGTAATTA+TGG | + | chr3.4:61227430-61227449 | MS.gene38552:intron | 15.0% |
| !! | ATAAAAAAAACTTCTACTAT+TGG | + | chr3.4:61226300-61226319 | MS.gene38552:intron | 15.0% |
| !! | TTTAAAAAAAAACAACTCAA+AGG | - | chr3.4:61227729-61227748 | None:intergenic | 15.0% |
| !! | TTTATAAACAACAAATTTCA+TGG | - | chr3.4:61227080-61227099 | None:intergenic | 15.0% |
| !!! | AAATTGACTGTATTATATTT+TGG | + | chr3.4:61228187-61228206 | MS.gene38552:intron | 15.0% |
| !!! | ATGAAATTTGTTGTTTATAA+AGG | + | chr3.4:61227079-61227098 | MS.gene38552:intron | 15.0% |
| !!! | GTTTAAATTACAACTATTTT+TGG | + | chr3.4:61225706-61225725 | MS.gene38552:intron | 15.0% |
| !!! | TTGTTTTGTATTATGTATTT+AGG | + | chr3.4:61225753-61225772 | MS.gene38552:intron | 15.0% |
| !! | AAGTACAAAAATAATGACAT+TGG | - | chr3.4:61226074-61226093 | None:intergenic | 20.0% |
| !! | ACAAATCGAATTAAATACAT+GGG | - | chr3.4:61227787-61227806 | None:intergenic | 20.0% |
| !! | TACAAATCGAATTAAATACA+TGG | - | chr3.4:61227788-61227807 | None:intergenic | 20.0% |
| !! | TTTAGTATAAATGACAATCA+AGG | + | chr3.4:61225855-61225874 | MS.gene38552:intron | 20.0% |
| !!! | AACATGGTAATCAATTTTTT+TGG | - | chr3.4:61227340-61227359 | None:intergenic | 20.0% |
| !!! | ACAAAAATGATACTTGTTTT+CGG | - | chr3.4:61226438-61226457 | None:intergenic | 20.0% |
| !!! | ATTTGATTTGATTTGATTGT+AGG | + | chr3.4:61225578-61225597 | MS.gene38552:intron | 20.0% |
| !!! | CAATGAATTTTGATTGAAAT+TGG | + | chr3.4:61225544-61225563 | MS.gene38552:intron | 20.0% |
| !!! | TTTGATTTGATTTGATTGTA+GGG | + | chr3.4:61225579-61225598 | MS.gene38552:intron | 20.0% |
| !!! | TTTTTTGGACAAAAAATACA+TGG | - | chr3.4:61227325-61227344 | None:intergenic | 20.0% |
| ! | AAACTTTAAATGACTCATAC+TGG | - | chr3.4:61227531-61227550 | None:intergenic | 25.0% |
| ! | AAATTACATATATGCCTCTA+TGG | - | chr3.4:61227105-61227124 | None:intergenic | 25.0% |
| ! | AATATCTTCTTTATTGTGTC+AGG | - | chr3.4:61228519-61228538 | None:intergenic | 25.0% |
| ! | ACAAAAATAATGACATTGGA+TGG | - | chr3.4:61226070-61226089 | None:intergenic | 25.0% |
| ! | AGTCATTACAATCTAGTAAA+TGG | + | chr3.4:61227569-61227588 | MS.gene38552:intron | 25.0% |
| ! | ATATCTTCTTTATTGTGTCA+GGG | - | chr3.4:61228518-61228537 | None:intergenic | 25.0% |
| ! | ATCTCAAATATTCCTAAACT+GGG | - | chr3.4:61226099-61226118 | None:intergenic | 25.0% |
| ! | CAAATATTTCTTGAAACGTT+GGG | - | chr3.4:61227408-61227427 | None:intergenic | 25.0% |
| ! | GGAATAAAAAGAGAATAAAG+AGG | + | chr3.4:61226971-61226990 | MS.gene38552:intron | 25.0% |
| ! | GTTAACATTATCAACGAAAT+AGG | + | chr3.4:61226861-61226880 | MS.gene38552:intron | 25.0% |
| ! | GTTGGGAAAAATATGAAAAA+CGG | - | chr3.4:61227391-61227410 | None:intergenic | 25.0% |
| ! | TAGCAGAATTATAAAACTAG+AGG | - | chr3.4:61228769-61228788 | None:intergenic | 25.0% |
| ! | TCAAATATTTCTTGAAACGT+TGG | - | chr3.4:61227409-61227428 | None:intergenic | 25.0% |
| ! | TGACACAATAAAGAAGATAT+TGG | + | chr3.4:61228518-61228537 | MS.gene38552:CDS | 25.0% |
| ! | TGTAAATCAAGACAAAAAAG+TGG | - | chr3.4:61227755-61227774 | None:intergenic | 25.0% |
| ! | TTCTTGATGTATGCATTAAT+GGG | + | chr3.4:61225783-61225802 | MS.gene38552:CDS | 25.0% |
| ! | TTCTTTATGATATGACGAAA+CGG | + | chr3.4:61225947-61225966 | MS.gene38552:intron | 25.0% |
| ! | TTGTTATAATAGTTCCAGTT+GGG | - | chr3.4:61226722-61226741 | None:intergenic | 25.0% |
| ! | TTTAATGTAACAGAAGTCTA+AGG | - | chr3.4:61226414-61226433 | None:intergenic | 25.0% |
| !! | CTCTGTAATCATGATTTTAA+AGG | + | chr3.4:61226950-61226969 | MS.gene38552:intron | 25.0% |
| !!! | AATATGAGTTGGTTTGTAAT+CGG | + | chr3.4:61226575-61226594 | MS.gene38552:intron | 25.0% |
| !!! | ATTTTGATTGAAATTGGAAC+TGG | + | chr3.4:61225550-61225569 | MS.gene38552:intron | 25.0% |
| !!! | CTGCTAACTTTTATTTTATC+TGG | + | chr3.4:61228783-61228802 | MS.gene38552:intron | 25.0% |
| !!! | CTTTAAAATCATGATTACAG+AGG | - | chr3.4:61226952-61226971 | None:intergenic | 25.0% |
| !!! | GACTGTATTATATTTTGGTA+GGG | + | chr3.4:61228192-61228211 | MS.gene38552:intron | 25.0% |
| !!! | TCAAGGTTGTTATTTTATTG+AGG | + | chr3.4:61225872-61225891 | MS.gene38552:intron | 25.0% |
| !!! | TGACTGTATTATATTTTGGT+AGG | + | chr3.4:61228191-61228210 | MS.gene38552:intron | 25.0% |
| !!! | TTTTGATTGAAATTGGAACT+GGG | + | chr3.4:61225551-61225570 | MS.gene38552:intron | 25.0% |
| AATTCTACTGTCATGGTAAA+AGG | - | chr3.4:61227465-61227484 | None:intergenic | 30.0% | |
| AATTGCACTTCTAATGCAAT+TGG | + | chr3.4:61228601-61228620 | MS.gene38552:intron | 30.0% | |
| ACAATTAGAAGTTGAATCAC+TGG | + | chr3.4:61226625-61226644 | MS.gene38552:intron | 30.0% | |
| ACTGAAATTGGTGAAACTAA+GGG | + | chr3.4:61227822-61227841 | MS.gene38552:CDS | 30.0% | |
| AGACTGAAAAATAACTTCGT+TGG | - | chr3.4:61226178-61226197 | None:intergenic | 30.0% | |
| AGATAAATGCTCTCTTATCA+GGG | - | chr3.4:61226807-61226826 | None:intergenic | 30.0% | |
| ATACCATCTATGAGAAGTTT+AGG | + | chr3.4:61227608-61227627 | MS.gene38552:intron | 30.0% | |
| ATATGTAATTATGGCGTATG+TGG | + | chr3.4:61227439-61227458 | MS.gene38552:intron | 30.0% | |
| ATCATCTATACTTGATCAAC+AGG | - | chr3.4:61226522-61226541 | None:intergenic | 30.0% | |
| ATTGTCAAAAGAATGGACAA+AGG | + | chr3.4:61228827-61228846 | MS.gene38552:CDS | 30.0% | |
| CAACTCATATTACACTGTTA+TGG | - | chr3.4:61226566-61226585 | None:intergenic | 30.0% | |
| CAGTTTAGGAATATTTGAGA+TGG | + | chr3.4:61226098-61226117 | MS.gene38552:intron | 30.0% | |
| CATAACAGTGTAATATGAGT+TGG | + | chr3.4:61226564-61226583 | MS.gene38552:intron | 30.0% | |
| CATCTCAAATATTCCTAAAC+TGG | - | chr3.4:61226100-61226119 | None:intergenic | 30.0% | |
| CTGAAGAAAAGCTATGAATT+GGG | + | chr3.4:61228681-61228700 | MS.gene38552:CDS | 30.0% | |
| CTTCTTGATGTATGCATTAA+TGG | + | chr3.4:61225782-61225801 | MS.gene38552:CDS | 30.0% | |
| GTTGTTATAATAGTTCCAGT+TGG | - | chr3.4:61226723-61226742 | None:intergenic | 30.0% | |
| TAAAATCATGATTACAGAGG+AGG | - | chr3.4:61226949-61226968 | None:intergenic | 30.0% | |
| TAAATACCCCAAAATCTCAT+TGG | - | chr3.4:61225673-61225692 | None:intergenic | 30.0% | |
| TATGCATTCTAGTGTAGAAA+AGG | - | chr3.4:61227025-61227044 | None:intergenic | 30.0% | |
| TCTCAAATATTCCTAAACTG+GGG | - | chr3.4:61226098-61226117 | None:intergenic | 30.0% | |
| TTTACCATGACAGTAGAATT+AGG | + | chr3.4:61227465-61227484 | MS.gene38552:intron | 30.0% | |
| ! | AAGAAAGCCAATGAGATTTT+GGG | + | chr3.4:61225663-61225682 | MS.gene38552:CDS | 30.0% |
| ! | AAGCCTTTTAATATTAGACG+GGG | + | chr3.4:61226750-61226769 | MS.gene38552:intron | 30.0% |
| ! | CAAGCCTTTTAATATTAGAC+GGG | + | chr3.4:61226749-61226768 | MS.gene38552:intron | 30.0% |
| ! | CCAAGCCTTTTAATATTAGA+CGG | + | chr3.4:61226748-61226767 | MS.gene38552:intron | 30.0% |
| ! | TAGAAACAGAATTTTGCCTA+AGG | - | chr3.4:61228143-61228162 | None:intergenic | 30.0% |
| ! | TTAGTGTTATCGATTGTGAA+TGG | + | chr3.4:61225992-61226011 | MS.gene38552:intron | 30.0% |
| ! | TTTTCCTAATTCTACTGTCA+TGG | - | chr3.4:61227472-61227491 | None:intergenic | 30.0% |
| !! | GTTATTTTATTGAGGTGGAA+GGG | + | chr3.4:61225880-61225899 | MS.gene38552:intron | 30.0% |
| !! | TTATTTTATCTGGACTCTTC+AGG | + | chr3.4:61228793-61228812 | MS.gene38552:intron | 30.0% |
| !!! | AGGTTGTTATTTTATTGAGG+TGG | + | chr3.4:61225875-61225894 | MS.gene38552:intron | 30.0% |
| !!! | TGTTATTTTATTGAGGTGGA+AGG | + | chr3.4:61225879-61225898 | MS.gene38552:intron | 30.0% |
| AAAGAAGATATTGGCACAAC+AGG | + | chr3.4:61228527-61228546 | MS.gene38552:CDS | 35.0% | |
| AAGAAGATAGGGGAAAAAGA+GGG | - | chr3.4:61225349-61225368 | None:intergenic | 35.0% | |
| ACTCTCAAGTCTCAAATTTC+TGG | - | chr3.4:61226487-61226506 | None:intergenic | 35.0% | |
| AGAAAGCAAAGAATCTGCAA+TGG | + | chr3.4:61226016-61226035 | MS.gene38552:intron | 35.0% | |
| AGGCATAAAAGGAATAGAAG+TGG | + | chr3.4:61228233-61228252 | MS.gene38552:CDS | 35.0% | |
| AGGCATTATTACTTTGCGAA+AGG | - | chr3.4:61228335-61228354 | None:intergenic | 35.0% | |
| ATAACATATCCTCAGTGTGT+TGG | + | chr3.4:61226211-61226230 | MS.gene38552:intron | 35.0% | |
| ATATGTTAGTGACCCAACTA+CGG | + | chr3.4:61227500-61227519 | MS.gene38552:intron | 35.0% | |
| ATTTATGTGCAAAACCACAC+AGG | - | chr3.4:61227690-61227709 | None:intergenic | 35.0% | |
| CATAAAAGGAATAGAAGTGG+TGG | + | chr3.4:61228236-61228255 | MS.gene38552:CDS | 35.0% | |
| CATTATTACTTTGCGAAAGG+TGG | - | chr3.4:61228332-61228351 | None:intergenic | 35.0% | |
| CCACAATTTCCCTAAATCTA+GGG | + | chr3.4:61225396-61225415 | MS.gene38552:CDS | 35.0% | |
| CCGTCTAATATTAAAAGGCT+TGG | - | chr3.4:61226751-61226770 | None:intergenic | 35.0% | |
| CCTAGATTTAGGGAAATTGT+GGG | - | chr3.4:61225398-61225417 | None:intergenic | 35.0% | |
| CTGAAATTGGTGAAACTAAG+GGG | + | chr3.4:61227823-61227842 | MS.gene38552:CDS | 35.0% | |
| CTGCATGATGAAAAAATCAG+TGG | - | chr3.4:61226138-61226157 | None:intergenic | 35.0% | |
| GAATTCAACAGTTATCAGTC+AGG | + | chr3.4:61225820-61225839 | MS.gene38552:CDS | 35.0% | |
| GACTGAAATTGGTGAAACTA+AGG | + | chr3.4:61227821-61227840 | MS.gene38552:CDS | 35.0% | |
| GAGAAGCAGTAGAAAAAACA+TGG | - | chr3.4:61227356-61227375 | None:intergenic | 35.0% | |
| GAGATAAATGCTCTCTTATC+AGG | - | chr3.4:61226808-61226827 | None:intergenic | 35.0% | |
| GATTCTGTTGATGTTTCATG+TGG | + | chr3.4:61227220-61227239 | MS.gene38552:CDS | 35.0% | |
| GCTATTATATTTCACCCAAC+TGG | + | chr3.4:61226705-61226724 | MS.gene38552:intron | 35.0% | |
| GCTGAAGAAAAGCTATGAAT+TGG | + | chr3.4:61228680-61228699 | MS.gene38552:CDS | 35.0% | |
| GGGAAAAATATGAAAAACGG+AGG | - | chr3.4:61227388-61227407 | None:intergenic | 35.0% | |
| GTAACCATTGTTCTTTATCC+AGG | + | chr3.4:61227949-61227968 | MS.gene38552:intron | 35.0% | |
| GTAGAATTAGGAAAACCAAG+TGG | + | chr3.4:61227477-61227496 | MS.gene38552:intron | 35.0% | |
| GTTGTTTATAAAGGCCATAG+AGG | + | chr3.4:61227088-61227107 | MS.gene38552:intron | 35.0% | |
| TAATGACATTGGATGGAATG+TGG | - | chr3.4:61226063-61226082 | None:intergenic | 35.0% | |
| TCCAATGCAAAAGACATAAG+TGG | + | chr3.4:61228573-61228592 | MS.gene38552:intron | 35.0% | |
| TCCATTGAGATTCAAGAACA+CGG | - | chr3.4:61228744-61228763 | None:intergenic | 35.0% | |
| TGCTGGAATTGTCAAAAGAA+TGG | + | chr3.4:61228820-61228839 | MS.gene38552:CDS | 35.0% | |
| TGGAAATGACTGGTATTCTT+GGG | - | chr3.4:61228470-61228489 | None:intergenic | 35.0% | |
| TGTTTATTCGCAATGCAATG+CGG | - | chr3.4:61225526-61225545 | None:intergenic | 35.0% | |
| TTCAAGAACACGGATAGTAT+AGG | - | chr3.4:61228734-61228753 | None:intergenic | 35.0% | |
| TTGGAAATGACTGGTATTCT+TGG | - | chr3.4:61228471-61228490 | None:intergenic | 35.0% | |
| TTTATGTGCAAAACCACACA+GGG | - | chr3.4:61227689-61227708 | None:intergenic | 35.0% | |
| ! | ACCACTTATGTCTTTTGCAT+TGG | - | chr3.4:61228577-61228596 | None:intergenic | 35.0% |
| ! | AGAAAGCCAATGAGATTTTG+GGG | + | chr3.4:61225664-61225683 | MS.gene38552:CDS | 35.0% |
| ! | CAAGAAAGCCAATGAGATTT+TGG | + | chr3.4:61225662-61225681 | MS.gene38552:CDS | 35.0% |
| ! | GTAATAATGCCTTTTCCTCA+TGG | + | chr3.4:61228343-61228362 | MS.gene38552:intron | 35.0% |
| ! | GTTGAATTCAGCTTTTCCTT+CGG | - | chr3.4:61225809-61225828 | None:intergenic | 35.0% |
| ! | TTTTGTACTTTCCCCAGTTT+AGG | + | chr3.4:61226084-61226103 | MS.gene38552:intron | 35.0% |
| !! | CGATTTGTAAGCTTTGAAGA+TGG | + | chr3.4:61227799-61227818 | MS.gene38552:intron | 35.0% |
| !! | CTTTGAAGATGGACTGAAAT+TGG | + | chr3.4:61227810-61227829 | MS.gene38552:CDS | 35.0% |
| !! | GGTGCTGATATTGAAAACAT+CGG | + | chr3.4:61228848-61228867 | MS.gene38552:CDS | 35.0% |
| !! | GTGTGGTTTTGCACATAAAT+TGG | + | chr3.4:61227690-61227709 | MS.gene38552:intron | 35.0% |
| !! | TTCGATTTGGGAAGAAGATA+GGG | - | chr3.4:61225360-61225379 | None:intergenic | 35.0% |
| !! | TTTCCCTAAATCTAGGGTTT+TGG | + | chr3.4:61225402-61225421 | MS.gene38552:CDS | 35.0% |
| !!! | AATTGTGGGTTTTAAGAGTG+TGG | - | chr3.4:61225384-61225403 | None:intergenic | 35.0% |
| !!! | ATCTGGCTTTTAACAACCTT+AGG | + | chr3.4:61228124-61228143 | MS.gene38552:intron | 35.0% |
| !!! | ATTGTGGGTTTTAAGAGTGT+GGG | - | chr3.4:61225383-61225402 | None:intergenic | 35.0% |
| !!! | CCATACTAGTTTTATGGAAC+CGG | + | chr3.4:61228398-61228417 | MS.gene38552:CDS | 35.0% |
| !!! | CGCTTTCCATACTAGTTTTA+TGG | + | chr3.4:61228392-61228411 | MS.gene38552:CDS | 35.0% |
| AAAAGCTATGAATTGGGACC+TGG | + | chr3.4:61228687-61228706 | MS.gene38552:CDS | 40.0% | |
| AAGGGTGGAGTGAAATTTAG+TGG | + | chr3.4:61225898-61225917 | MS.gene38552:intron | 40.0% | |
| AATCAGCTACAGAAGCTTCA+TGG | - | chr3.4:61225459-61225478 | None:intergenic | 40.0% | |
| AGCAAGACTTGTGACATACA+GGG | - | chr3.4:61227155-61227174 | None:intergenic | 40.0% | |
| AGGCCTAAACTTCTCATAGA+TGG | - | chr3.4:61227614-61227633 | None:intergenic | 40.0% | |
| AGGTTACTTACCCTGTTCAA+TGG | + | chr3.4:61228625-61228644 | MS.gene38552:intron | 40.0% | |
| AGTGAAGACTCTTCTATCCA+AGG | + | chr3.4:61228656-61228675 | MS.gene38552:CDS | 40.0% | |
| ATCATTCATCCAACACACTG+AGG | - | chr3.4:61226223-61226242 | None:intergenic | 40.0% | |
| ATGATTACAGAGGAGGTCTA+AGG | - | chr3.4:61226942-61226961 | None:intergenic | 40.0% | |
| CAGCCCCGTCTAATATTAAA+AGG | - | chr3.4:61226756-61226775 | None:intergenic | 40.0% | |
| CCAATTACCTATGTCCAGTA+AGG | + | chr3.4:61228092-61228111 | MS.gene38552:intron | 40.0% | |
| CCCACAATTTCCCTAAATCT+AGG | + | chr3.4:61225395-61225414 | MS.gene38552:CDS | 40.0% | |
| CCCTAGATTTAGGGAAATTG+TGG | - | chr3.4:61225399-61225418 | None:intergenic | 40.0% | |
| CCGGTTCCATAAAACTAGTA+TGG | - | chr3.4:61228401-61228420 | None:intergenic | 40.0% | |
| CCTTACTGGACATAGGTAAT+TGG | - | chr3.4:61228095-61228114 | None:intergenic | 40.0% | |
| CGTAAACTTTCTACCTTTCC+AGG | - | chr3.4:61228708-61228727 | None:intergenic | 40.0% | |
| CTGACAAGCTGAAAACAAAC+AGG | - | chr3.4:61227634-61227653 | None:intergenic | 40.0% | |
| GAAGAAGATAGGGGAAAAAG+AGG | - | chr3.4:61225350-61225369 | None:intergenic | 40.0% | |
| GAATCACTGGAAATCACTTC+TGG | + | chr3.4:61226638-61226657 | MS.gene38552:intron | 40.0% | |
| GCATCCTGGATAAAGAACAA+TGG | - | chr3.4:61227956-61227975 | None:intergenic | 40.0% | |
| GCATTTACGTTGGAAATGAC+TGG | - | chr3.4:61228480-61228499 | None:intergenic | 40.0% | |
| GGAAATGACTGGTATTCTTG+GGG | - | chr3.4:61228469-61228488 | None:intergenic | 40.0% | |
| GGTTACTTACCCTGTTCAAT+GGG | + | chr3.4:61228626-61228645 | MS.gene38552:intron | 40.0% | |
| GTGAAGACTCTTCTATCCAA+GGG | + | chr3.4:61228657-61228676 | MS.gene38552:CDS | 40.0% | |
| GTTTCATGTGGTTTGAGCTT+AGG | + | chr3.4:61227232-61227251 | MS.gene38552:CDS | 40.0% | |
| TATGTCCAGTAAGGTTCTTG+AGG | + | chr3.4:61228101-61228120 | MS.gene38552:intron | 40.0% | |
| TATGTTAGTGACCCAACTAC+GGG | + | chr3.4:61227501-61227520 | MS.gene38552:intron | 40.0% | |
| TCAAGAACCTTACTGGACAT+AGG | - | chr3.4:61228102-61228121 | None:intergenic | 40.0% | |
| TCCGTGTTCTTGAATCTCAA+TGG | + | chr3.4:61228740-61228759 | MS.gene38552:intron | 40.0% | |
| TGAAAAACGGAGGCAATGAA+AGG | - | chr3.4:61227378-61227397 | None:intergenic | 40.0% | |
| TGAAGACTCTTCTATCCAAG+GGG | + | chr3.4:61228658-61228677 | MS.gene38552:CDS | 40.0% | |
| TGGCCAAAACCCTAGATTTA+GGG | - | chr3.4:61225408-61225427 | None:intergenic | 40.0% | |
| TTCGTTGGAACTGCATGAAA+TGG | - | chr3.4:61226163-61226182 | None:intergenic | 40.0% | |
| TTGTACAAAACTGCAGCAGA+AGG | - | chr3.4:61225645-61225664 | None:intergenic | 40.0% | |
| ! | ATAATGCCTTTTCCTCATGG+TGG | + | chr3.4:61228346-61228365 | MS.gene38552:intron | 40.0% |
| ! | ATTTTATTGAGGTGGAAGGG+TGG | + | chr3.4:61225883-61225902 | MS.gene38552:intron | 40.0% |
| ! | CTTTTAATATTAGACGGGGC+TGG | + | chr3.4:61226754-61226773 | MS.gene38552:intron | 40.0% |
| ! | TAAGAGTGTGGGTTCGATTT+GGG | - | chr3.4:61225372-61225391 | None:intergenic | 40.0% |
| ! | TTAAGAGTGTGGGTTCGATT+TGG | - | chr3.4:61225373-61225392 | None:intergenic | 40.0% |
| !! | ACTGTTGTTTCCCATTGAAC+AGG | - | chr3.4:61228639-61228658 | None:intergenic | 40.0% |
| !! | CTGTTGTTTCCCATTGAACA+GGG | - | chr3.4:61228638-61228657 | None:intergenic | 40.0% |
| !! | GTTCGATTTGGGAAGAAGAT+AGG | - | chr3.4:61225361-61225380 | None:intergenic | 40.0% |
| !! | TCGATTTGGGAAGAAGATAG+GGG | - | chr3.4:61225359-61225378 | None:intergenic | 40.0% |
| ACTACCACAGATTACCTGCA+TGG | - | chr3.4:61227854-61227873 | None:intergenic | 45.0% | |
| AGATTGAGATCCAGTGGAGA+TGG | - | chr3.4:61225431-61225450 | None:intergenic | 45.0% | |
| AGCCAAAGCGAAGTCTTTCA+AGG | + | chr3.4:61228260-61228279 | MS.gene38552:CDS | 45.0% | |
| AGCCTTGAAAGACTTCGCTT+TGG | - | chr3.4:61228265-61228284 | None:intergenic | 45.0% | |
| AGCTACAGAAGCTTCATGGA+TGG | - | chr3.4:61225455-61225474 | None:intergenic | 45.0% | |
| ATACTGGAAACCCCGTAGTT+GGG | - | chr3.4:61227515-61227534 | None:intergenic | 45.0% | |
| ATCTGAACCTTCTCAGCTTC+AGG | - | chr3.4:61228070-61228089 | None:intergenic | 45.0% | |
| ATGTTAGTGACCCAACTACG+GGG | + | chr3.4:61227502-61227521 | MS.gene38552:intron | 45.0% | |
| ATTGGATGGAATGTGGTGCA+GGG | - | chr3.4:61226056-61226075 | None:intergenic | 45.0% | |
| ATTGTGTCAGGGTCTGTATG+TGG | - | chr3.4:61228507-61228526 | None:intergenic | 45.0% | |
| CAGATCCTCAAGAACCTTAC+TGG | - | chr3.4:61228109-61228128 | None:intergenic | 45.0% | |
| CAGCAAGACTTGTGACATAC+AGG | - | chr3.4:61227156-61227175 | None:intergenic | 45.0% | |
| CAGTAAGGTTCTTGAGGATC+TGG | + | chr3.4:61228107-61228126 | MS.gene38552:intron | 45.0% | |
| CTATGAATTGGGACCTGGAA+AGG | + | chr3.4:61228692-61228711 | MS.gene38552:CDS | 45.0% | |
| GAAGTCTTTCAAGGCTCGAA+TGG | + | chr3.4:61228269-61228288 | MS.gene38552:CDS | 45.0% | |
| GATGCTGCTGATGCTACTAA+AGG | + | chr3.4:61227971-61227990 | MS.gene38552:CDS | 45.0% | |
| GATGGAAGATTGAGATCCAG+TGG | - | chr3.4:61225437-61225456 | None:intergenic | 45.0% | |
| GCACTTCTAATGCAATTGGC+AGG | + | chr3.4:61228605-61228624 | MS.gene38552:intron | 45.0% | |
| GCGGAAAATATACCTGACCA+GGG | - | chr3.4:61225507-61225526 | None:intergenic | 45.0% | |
| GCTTGTCAGCTTGTAGCATA+TGG | + | chr3.4:61227645-61227664 | MS.gene38552:intron | 45.0% | |
| GGCTGAAGCAGAGAATTAGA+TGG | - | chr3.4:61227130-61227149 | None:intergenic | 45.0% | |
| GGGTCACTAACATATCCACT+TGG | - | chr3.4:61227495-61227514 | None:intergenic | 45.0% | |
| GTGGCCAAAACCCTAGATTT+AGG | - | chr3.4:61225409-61225428 | None:intergenic | 45.0% | |
| TAGGGAAACTATGCTGTCTC+TGG | + | chr3.4:61228210-61228229 | MS.gene38552:intron | 45.0% | |
| TATTGGCACAACAGGTATGC+AGG | + | chr3.4:61228535-61228554 | MS.gene38552:intron | 45.0% | |
| TCACTGGAAATCACTTCTGG+TGG | + | chr3.4:61226641-61226660 | MS.gene38552:intron | 45.0% | |
| TGCGGAAAATATACCTGACC+AGG | - | chr3.4:61225508-61225527 | None:intergenic | 45.0% | |
| TTGCTGCTGTTGAGCTACTT+CGG | + | chr3.4:61227170-61227189 | MS.gene38552:CDS | 45.0% | |
| ! | ATAGCTTTTCTTCAGCCCCT+TGG | - | chr3.4:61228676-61228695 | None:intergenic | 45.0% |
| ! | ATGTGGCAGAGCATTTACGT+TGG | - | chr3.4:61228490-61228509 | None:intergenic | 45.0% |
| ! | CTTAGGAGAGTATACTGCTC+TGG | + | chr3.4:61227249-61227268 | MS.gene38552:CDS | 45.0% |
| ! | TCTTGGGGTTCTAATGTCTG+TGG | - | chr3.4:61228454-61228473 | None:intergenic | 45.0% |
| ! | TGGACTCTTCAGGTTATTGC+TGG | + | chr3.4:61228803-61228822 | MS.gene38552:intron | 45.0% |
| ! | TGTATGCATTAATGGGCCGA+AGG | + | chr3.4:61225790-61225809 | MS.gene38552:CDS | 45.0% |
| !! | GAAGAAGTATCTTCCCTGTG+TGG | + | chr3.4:61227673-61227692 | MS.gene38552:intron | 45.0% |
| !! | TAAAGGTGCCATGGTTAGTG+TGG | + | chr3.4:61227988-61228007 | MS.gene38552:CDS | 45.0% |
| !! | TGATGCTACTAAAGGTGCCA+TGG | + | chr3.4:61227979-61227998 | MS.gene38552:CDS | 45.0% |
| ACCAGGGAAGAGAAACGCAT+TGG | - | chr3.4:61225491-61225510 | None:intergenic | 50.0% | |
| AGACTTGTGACATACAGGGC+AGG | - | chr3.4:61227151-61227170 | None:intergenic | 50.0% | |
| AGCTTCAGGCACTTCCTGAT+TGG | - | chr3.4:61228056-61228075 | None:intergenic | 50.0% | |
| ATACTGCTCTGGCGTTTGCT+GGG | + | chr3.4:61227260-61227279 | MS.gene38552:CDS | 50.0% | |
| CAGTCCTACCACACTAACCA+TGG | - | chr3.4:61227999-61228018 | None:intergenic | 50.0% | |
| CATACTGGAAACCCCGTAGT+TGG | - | chr3.4:61227516-61227535 | None:intergenic | 50.0% | |
| CATGGTTAGTGTGGTAGGAC+TGG | + | chr3.4:61227997-61228016 | MS.gene38552:CDS | 50.0% | |
| CATTGGATGGAATGTGGTGC+AGG | - | chr3.4:61226057-61226076 | None:intergenic | 50.0% | |
| GAAGCCATGCAGGTAATCTG+TGG | + | chr3.4:61227847-61227866 | MS.gene38552:intron | 50.0% | |
| GCTTCCAATCTTGACACTGC+CGG | - | chr3.4:61228420-61228439 | None:intergenic | 50.0% | |
| GGAAACTATGCTGTCTCTGG+AGG | + | chr3.4:61228213-61228232 | MS.gene38552:CDS | 50.0% | |
| GGTGCACAAGCTGTTGGAAT+GGG | + | chr3.4:61225600-61225619 | MS.gene38552:CDS | 50.0% | |
| GTGCTCAAGTGCAGACAATG+CGG | - | chr3.4:61226899-61226918 | None:intergenic | 50.0% | |
| GTTGTGTGATGCAGCCAATC+AGG | + | chr3.4:61228039-61228058 | MS.gene38552:CDS | 50.0% | |
| TAGTAGCATCAGCAGCATCC+TGG | - | chr3.4:61227970-61227989 | None:intergenic | 50.0% | |
| TATACTGCTCTGGCGTTTGC+TGG | + | chr3.4:61227259-61227278 | MS.gene38552:CDS | 50.0% | |
| TCCAATGCGTTTCTCTTCCC+TGG | + | chr3.4:61225487-61225506 | MS.gene38552:CDS | 50.0% | |
| TGCTGCTGTTGAGCTACTTC+GGG | + | chr3.4:61227171-61227190 | MS.gene38552:CDS | 50.0% | |
| TTGAGATCCAGTGGAGATGG+TGG | - | chr3.4:61225428-61225447 | None:intergenic | 50.0% | |
| TTGTAGGGTGCACAAGCTGT+TGG | + | chr3.4:61225594-61225613 | MS.gene38552:intron | 50.0% | |
| ! | GCTGTCTCTGGAGGCATAAA+AGG | + | chr3.4:61228222-61228241 | MS.gene38552:CDS | 50.0% |
| ! | TACAGAGGAGGTCTAAGGTC+TGG | - | chr3.4:61226937-61226956 | None:intergenic | 50.0% |
| AAGGTCTGGTGAGGAGGGAA+TGG | - | chr3.4:61226923-61226942 | None:intergenic | 55.0% | |
| ACTAAGGGGTGAAGCCATGC+AGG | + | chr3.4:61227837-61227856 | MS.gene38552:CDS | 55.0% | |
| CACCTGCCACCATGAGGAAA+AGG | - | chr3.4:61228355-61228374 | None:intergenic | 55.0% | |
| GGAACCGGCAGTGTCAAGAT+TGG | + | chr3.4:61228413-61228432 | MS.gene38552:CDS | 55.0% | |
| GGGTGCACAAGCTGTTGGAA+TGG | + | chr3.4:61225599-61225618 | MS.gene38552:intron | 55.0% | |
| GGTAGGACTGGACTCAGAGA+AGG | + | chr3.4:61228009-61228028 | MS.gene38552:CDS | 55.0% | |
| TGCGTTTCTCTTCCCTGGTC+AGG | + | chr3.4:61225492-61225511 | MS.gene38552:CDS | 55.0% | |
| TGGCTGCATCACACAACTGC+TGG | - | chr3.4:61228036-61228055 | None:intergenic | 55.0% | |
| ! | AGGAGGTCTAAGGTCTGGTG+AGG | - | chr3.4:61226932-61226951 | None:intergenic | 55.0% |
| ! | AGGTCTAAGGTCTGGTGAGG+AGG | - | chr3.4:61226929-61226948 | None:intergenic | 55.0% |
| ! | GGTCTAAGGTCTGGTGAGGA+GGG | - | chr3.4:61226928-61226947 | None:intergenic | 55.0% |
| ! | GGTGCCATGGTTAGTGTGGT+AGG | + | chr3.4:61227992-61228011 | MS.gene38552:CDS | 55.0% |
| ! | TACTGCTCTGGCGTTTGCTG+GGG | + | chr3.4:61227261-61227280 | MS.gene38552:CDS | 55.0% |
| ! | TGCCTTTTCCTCATGGTGGC+AGG | + | chr3.4:61228350-61228369 | MS.gene38552:intron | 55.0% |
| !! | ATTAGACGGGGCTGGCTACA+TGG | + | chr3.4:61226762-61226781 | MS.gene38552:intron | 55.0% |
| !! | GGAAGTGCCTGAAGCTGAGA+AGG | + | chr3.4:61228060-61228079 | MS.gene38552:CDS | 55.0% |
| !! | GTTTTGGCCACCATCTCCAC+TGG | + | chr3.4:61225418-61225437 | MS.gene38552:CDS | 55.0% |
| GAGCTACTTCGGGCACGTGA+GGG | + | chr3.4:61227181-61227200 | MS.gene38552:CDS | 60.0% | |
| TGAGCTACTTCGGGCACGTG+AGG | + | chr3.4:61227180-61227199 | MS.gene38552:CDS | 60.0% | |
| ! | TGGCGTTTGCTGGGGCTTTC+AGG | + | chr3.4:61227269-61227288 | MS.gene38552:CDS | 60.0% |
| CTACTTCGGGCACGTGAGGG+AGG | + | chr3.4:61227184-61227203 | MS.gene38552:CDS | 65.0% | |
| !! | GGAAAGCGCCTGCAACAGCC+AGG | - | chr3.4:61228380-61228399 | None:intergenic | 65.0% |
| CAGGCGCACCTGCCACCATG+AGG | - | chr3.4:61228361-61228380 | None:intergenic | 70.0% | |
| CAGGTGCGCCTGGCTGTTGC+AGG | + | chr3.4:61228369-61228388 | MS.gene38552:intron | 70.0% | |
| CTCATGGTGGCAGGTGCGCC+TGG | + | chr3.4:61228359-61228378 | MS.gene38552:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 61225325 | 61228877 | 61225325 | ID=MS.gene38552 |
| chr3.4 | mRNA | 61225325 | 61228877 | 61225325 | ID=MS.gene38552.t1;Parent=MS.gene38552 |
| chr3.4 | exon | 61225325 | 61225513 | 61225325 | ID=MS.gene38552.t1.exon1;Parent=MS.gene38552.t1 |
| chr3.4 | CDS | 61225325 | 61225513 | 61225325 | ID=cds.MS.gene38552.t1;Parent=MS.gene38552.t1 |
| chr3.4 | exon | 61225600 | 61225685 | 61225600 | ID=MS.gene38552.t1.exon2;Parent=MS.gene38552.t1 |
| chr3.4 | CDS | 61225600 | 61225685 | 61225600 | ID=cds.MS.gene38552.t1;Parent=MS.gene38552.t1 |
| chr3.4 | exon | 61225775 | 61225841 | 61225775 | ID=MS.gene38552.t1.exon3;Parent=MS.gene38552.t1 |
| chr3.4 | CDS | 61225775 | 61225841 | 61225775 | ID=cds.MS.gene38552.t1;Parent=MS.gene38552.t1 |
| chr3.4 | exon | 61227148 | 61227290 | 61227148 | ID=MS.gene38552.t1.exon4;Parent=MS.gene38552.t1 |
| chr3.4 | CDS | 61227148 | 61227290 | 61227148 | ID=cds.MS.gene38552.t1;Parent=MS.gene38552.t1 |
| chr3.4 | exon | 61227810 | 61227858 | 61227810 | ID=MS.gene38552.t1.exon5;Parent=MS.gene38552.t1 |
| chr3.4 | CDS | 61227810 | 61227858 | 61227810 | ID=cds.MS.gene38552.t1;Parent=MS.gene38552.t1 |
| chr3.4 | exon | 61227971 | 61228108 | 61227971 | ID=MS.gene38552.t1.exon6;Parent=MS.gene38552.t1 |
| chr3.4 | CDS | 61227971 | 61228108 | 61227971 | ID=cds.MS.gene38552.t1;Parent=MS.gene38552.t1 |
| chr3.4 | exon | 61228213 | 61228293 | 61228213 | ID=MS.gene38552.t1.exon7;Parent=MS.gene38552.t1 |
| chr3.4 | CDS | 61228213 | 61228293 | 61228213 | ID=cds.MS.gene38552.t1;Parent=MS.gene38552.t1 |
| chr3.4 | exon | 61228372 | 61228548 | 61228372 | ID=MS.gene38552.t1.exon8;Parent=MS.gene38552.t1 |
| chr3.4 | CDS | 61228372 | 61228548 | 61228372 | ID=cds.MS.gene38552.t1;Parent=MS.gene38552.t1 |
| chr3.4 | exon | 61228627 | 61228713 | 61228627 | ID=MS.gene38552.t1.exon9;Parent=MS.gene38552.t1 |
| chr3.4 | CDS | 61228627 | 61228713 | 61228627 | ID=cds.MS.gene38552.t1;Parent=MS.gene38552.t1 |
| chr3.4 | exon | 61228815 | 61228877 | 61228815 | ID=MS.gene38552.t1.exon10;Parent=MS.gene38552.t1 |
| chr3.4 | CDS | 61228815 | 61228877 | 61228815 | ID=cds.MS.gene38552.t1;Parent=MS.gene38552.t1 |
| Gene Sequence |
| Protein sequence |
