Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38557.t1 | RHN70313.1 | 98.4 | 442 | 7 | 0 | 1 | 442 | 1 | 442 | 7.50E-246 | 859.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38557.t1 | A0A068FIK2 | 84.1 | 440 | 66 | 3 | 3 | 441 | 6 | 442 | 1.8e-203 | 709.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38557.t1 | G7J6Z1 | 98.4 | 442 | 7 | 0 | 1 | 442 | 1 | 442 | 5.4e-246 | 859.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049989 | MS.gene38557 | 0.822861 | 1.89E-53 | -1.69E-46 |
MS.gene050297 | MS.gene38557 | 0.802661 | 5.05E-49 | -1.69E-46 |
MS.gene051067 | MS.gene38557 | 0.850884 | 1.27E-60 | -1.69E-46 |
MS.gene051087 | MS.gene38557 | 0.820504 | 6.62E-53 | -1.69E-46 |
MS.gene052732 | MS.gene38557 | 0.833011 | 6.81E-56 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38557.t1 | MTR_3g102170 | 98.416 | 442 | 7 | 0 | 1 | 442 | 1 | 442 | 0.0 | 921 |
MS.gene38557.t1 | MTR_1g018940 | 87.104 | 442 | 57 | 0 | 1 | 442 | 1 | 442 | 0.0 | 810 |
MS.gene38557.t1 | MTR_4g094882 | 78.311 | 438 | 87 | 3 | 5 | 436 | 9 | 444 | 0.0 | 713 |
MS.gene38557.t1 | MTR_3g100270 | 65.476 | 420 | 124 | 5 | 9 | 424 | 10 | 412 | 0.0 | 550 |
MS.gene38557.t1 | MTR_5g066320 | 61.333 | 450 | 148 | 8 | 1 | 441 | 6 | 438 | 1.51e-178 | 533 |
MS.gene38557.t1 | MTR_2g096010 | 39.152 | 401 | 202 | 12 | 9 | 394 | 50 | 423 | 4.23e-73 | 248 |
MS.gene38557.t1 | MTR_1g059730 | 36.881 | 404 | 212 | 9 | 9 | 394 | 14 | 392 | 3.24e-71 | 243 |
MS.gene38557.t1 | MTR_7g105030 | 38.235 | 408 | 201 | 13 | 9 | 394 | 10 | 388 | 1.20e-70 | 241 |
MS.gene38557.t1 | MTR_7g105030 | 38.235 | 408 | 201 | 13 | 9 | 394 | 10 | 388 | 1.20e-70 | 241 |
MS.gene38557.t1 | MTR_1g067630 | 37.726 | 387 | 199 | 8 | 9 | 380 | 55 | 414 | 1.98e-70 | 241 |
MS.gene38557.t1 | MTR_4g087040 | 38.653 | 401 | 199 | 12 | 6 | 392 | 191 | 558 | 3.31e-68 | 236 |
MS.gene38557.t1 | MTR_2g087840 | 38.200 | 411 | 196 | 11 | 9 | 398 | 89 | 462 | 4.44e-67 | 233 |
MS.gene38557.t1 | MTR_4g123730 | 40.541 | 370 | 173 | 10 | 33 | 392 | 182 | 514 | 1.80e-66 | 231 |
MS.gene38557.t1 | MTR_3g084790 | 37.374 | 396 | 206 | 9 | 9 | 392 | 99 | 464 | 3.16e-66 | 230 |
MS.gene38557.t1 | MTR_1g017540 | 36.636 | 434 | 230 | 12 | 5 | 428 | 2 | 400 | 3.99e-64 | 221 |
MS.gene38557.t1 | MTR_1g484960 | 36.407 | 423 | 233 | 11 | 9 | 428 | 4 | 393 | 1.79e-63 | 222 |
MS.gene38557.t1 | MTR_8g080910 | 35.930 | 398 | 208 | 8 | 9 | 392 | 56 | 420 | 1.16e-62 | 219 |
MS.gene38557.t1 | MTR_7g112420 | 35.135 | 407 | 213 | 11 | 9 | 404 | 272 | 638 | 2.01e-60 | 211 |
MS.gene38557.t1 | MTR_2g055910 | 36.885 | 366 | 182 | 9 | 2 | 366 | 82 | 399 | 2.44e-59 | 205 |
MS.gene38557.t1 | MTR_7g112420 | 36.813 | 364 | 183 | 9 | 43 | 404 | 444 | 762 | 6.67e-59 | 208 |
MS.gene38557.t1 | MTR_7g109130 | 33.659 | 410 | 228 | 10 | 8 | 409 | 400 | 773 | 2.65e-57 | 204 |
MS.gene38557.t1 | MTR_7g109130 | 32.683 | 410 | 229 | 9 | 8 | 409 | 99 | 469 | 3.66e-57 | 200 |
MS.gene38557.t1 | MTR_7g109130 | 32.683 | 410 | 229 | 9 | 8 | 409 | 178 | 548 | 8.17e-57 | 201 |
MS.gene38557.t1 | MTR_2g082570 | 36.264 | 364 | 194 | 10 | 9 | 360 | 400 | 737 | 1.09e-56 | 200 |
MS.gene38557.t1 | MTR_5g049620 | 36.757 | 370 | 181 | 11 | 9 | 368 | 375 | 701 | 1.17e-56 | 201 |
MS.gene38557.t1 | MTR_5g031470 | 37.838 | 370 | 177 | 12 | 9 | 368 | 400 | 726 | 2.23e-56 | 201 |
MS.gene38557.t1 | MTR_7g109130 | 32.683 | 410 | 229 | 9 | 8 | 409 | 400 | 770 | 3.22e-56 | 201 |
MS.gene38557.t1 | MTR_7g061020 | 33.871 | 372 | 187 | 12 | 9 | 365 | 26 | 353 | 9.84e-56 | 195 |
MS.gene38557.t1 | MTR_1g087880 | 32.759 | 406 | 226 | 10 | 8 | 405 | 396 | 762 | 1.21e-55 | 199 |
MS.gene38557.t1 | MTR_5g049820 | 36.486 | 370 | 182 | 11 | 9 | 368 | 375 | 701 | 1.62e-55 | 198 |
MS.gene38557.t1 | MTR_3g117330 | 35.492 | 417 | 207 | 13 | 9 | 410 | 100 | 469 | 9.93e-55 | 196 |
MS.gene38557.t1 | MTR_2g069950 | 34.937 | 395 | 204 | 13 | 9 | 392 | 341 | 693 | 1.20e-54 | 196 |
MS.gene38557.t1 | MTR_5g025100 | 33.085 | 402 | 222 | 9 | 9 | 404 | 890 | 1250 | 1.73e-54 | 196 |
MS.gene38557.t1 | MTR_4g112350 | 36.461 | 373 | 183 | 10 | 9 | 366 | 124 | 457 | 3.89e-54 | 192 |
MS.gene38557.t1 | MTR_7g091290 | 32.487 | 394 | 220 | 10 | 9 | 395 | 393 | 747 | 5.29e-54 | 194 |
MS.gene38557.t1 | MTR_4g071210 | 34.783 | 414 | 214 | 12 | 9 | 410 | 90 | 459 | 2.00e-53 | 192 |
MS.gene38557.t1 | MTR_4g071210 | 34.783 | 414 | 214 | 12 | 9 | 410 | 90 | 459 | 2.14e-53 | 192 |
MS.gene38557.t1 | MTR_1g083770 | 33.333 | 408 | 227 | 12 | 9 | 409 | 411 | 780 | 2.48e-53 | 192 |
MS.gene38557.t1 | MTR_6g082470 | 36.997 | 373 | 180 | 12 | 9 | 370 | 31 | 359 | 8.35e-53 | 191 |
MS.gene38557.t1 | MTR_4g081390 | 37.466 | 363 | 190 | 10 | 9 | 360 | 433 | 769 | 2.02e-52 | 188 |
MS.gene38557.t1 | MTR_7g093720 | 35.714 | 392 | 201 | 12 | 9 | 392 | 74 | 422 | 2.18e-52 | 189 |
MS.gene38557.t1 | MTR_2g010760 | 37.047 | 359 | 184 | 9 | 9 | 359 | 436 | 760 | 1.68e-51 | 186 |
MS.gene38557.t1 | MTR_6g086735 | 33.673 | 392 | 204 | 9 | 9 | 388 | 116 | 463 | 3.69e-51 | 183 |
MS.gene38557.t1 | MTR_5g094310 | 31.373 | 408 | 230 | 8 | 9 | 398 | 75 | 450 | 4.17e-51 | 186 |
MS.gene38557.t1 | MTR_6g086735 | 34.184 | 392 | 202 | 10 | 9 | 388 | 116 | 463 | 5.04e-51 | 183 |
MS.gene38557.t1 | MTR_1g082920 | 30.841 | 428 | 239 | 12 | 9 | 426 | 148 | 528 | 5.75e-51 | 184 |
MS.gene38557.t1 | MTR_3g055940 | 31.415 | 417 | 235 | 12 | 6 | 405 | 73 | 455 | 1.30e-50 | 184 |
MS.gene38557.t1 | MTR_5g021650 | 33.333 | 396 | 210 | 12 | 9 | 392 | 21 | 374 | 1.33e-50 | 184 |
MS.gene38557.t1 | MTR_3g113110 | 33.671 | 395 | 209 | 10 | 9 | 392 | 20 | 372 | 1.52e-50 | 184 |
MS.gene38557.t1 | MTR_7g113520 | 30.913 | 427 | 240 | 13 | 9 | 426 | 128 | 508 | 1.60e-50 | 182 |
MS.gene38557.t1 | MTR_8g072430 | 32.425 | 367 | 204 | 7 | 9 | 370 | 876 | 1203 | 2.20e-50 | 184 |
MS.gene38557.t1 | MTR_5g011500 | 32.804 | 378 | 200 | 12 | 9 | 365 | 58 | 402 | 2.88e-50 | 183 |
MS.gene38557.t1 | MTR_5g096570 | 32.767 | 412 | 222 | 12 | 9 | 403 | 435 | 808 | 5.14e-50 | 183 |
MS.gene38557.t1 | MTR_4g092140 | 34.140 | 372 | 198 | 9 | 9 | 364 | 318 | 658 | 1.32e-49 | 179 |
MS.gene38557.t1 | MTR_8g076190 | 33.092 | 414 | 221 | 13 | 3 | 401 | 15 | 387 | 1.49e-49 | 181 |
MS.gene38557.t1 | MTR_8g076190 | 33.171 | 410 | 219 | 13 | 3 | 401 | 15 | 380 | 2.74e-49 | 181 |
MS.gene38557.t1 | MTR_3g060900 | 32.203 | 413 | 217 | 12 | 8 | 403 | 438 | 804 | 4.19e-49 | 180 |
MS.gene38557.t1 | MTR_8g076190 | 33.171 | 410 | 219 | 13 | 3 | 401 | 15 | 380 | 4.39e-49 | 180 |
MS.gene38557.t1 | MTR_7g075060 | 31.313 | 396 | 211 | 12 | 9 | 386 | 53 | 405 | 1.59e-47 | 175 |
MS.gene38557.t1 | MTR_1g081800 | 33.760 | 391 | 207 | 15 | 9 | 391 | 89 | 435 | 1.62e-47 | 172 |
MS.gene38557.t1 | MTR_8g098230 | 32.877 | 365 | 208 | 9 | 9 | 364 | 484 | 820 | 4.22e-47 | 174 |
MS.gene38557.t1 | MTR_2g101990 | 32.461 | 382 | 202 | 9 | 9 | 378 | 186 | 523 | 4.67e-47 | 172 |
MS.gene38557.t1 | MTR_8g098230 | 32.692 | 364 | 202 | 8 | 9 | 364 | 484 | 812 | 4.70e-47 | 174 |
MS.gene38557.t1 | MTR_4g124650 | 33.696 | 368 | 195 | 9 | 9 | 370 | 144 | 468 | 3.34e-46 | 171 |
MS.gene38557.t1 | MTR_4g071900 | 33.766 | 385 | 210 | 10 | 46 | 428 | 70 | 411 | 1.13e-45 | 169 |
MS.gene38557.t1 | MTR_8g104200 | 33.333 | 414 | 223 | 12 | 9 | 404 | 516 | 894 | 1.22e-45 | 170 |
MS.gene38557.t1 | MTR_2g436650 | 31.806 | 371 | 202 | 10 | 9 | 363 | 118 | 453 | 3.56e-45 | 168 |
MS.gene38557.t1 | MTR_4g119980 | 32.703 | 370 | 198 | 10 | 9 | 363 | 206 | 539 | 5.00e-45 | 167 |
MS.gene38557.t1 | MTR_2g436650 | 31.806 | 371 | 202 | 10 | 9 | 363 | 198 | 533 | 5.57e-45 | 167 |
MS.gene38557.t1 | MTR_4g081390 | 37.195 | 328 | 169 | 10 | 9 | 325 | 435 | 736 | 1.74e-43 | 162 |
MS.gene38557.t1 | MTR_2g082570 | 34.495 | 287 | 155 | 9 | 9 | 283 | 400 | 665 | 1.00e-36 | 143 |
MS.gene38557.t1 | MTR_6g084490 | 31.880 | 367 | 196 | 11 | 9 | 364 | 478 | 801 | 5.53e-33 | 132 |
MS.gene38557.t1 | MTR_7g091290 | 37.143 | 210 | 111 | 5 | 184 | 392 | 511 | 700 | 4.51e-32 | 130 |
MS.gene38557.t1 | MTR_8g471180 | 30.028 | 363 | 195 | 11 | 9 | 362 | 147 | 459 | 1.76e-30 | 125 |
MS.gene38557.t1 | MTR_1g075680 | 28.493 | 365 | 203 | 12 | 39 | 382 | 91 | 418 | 9.91e-25 | 107 |
MS.gene38557.t1 | MTR_3g113630 | 27.950 | 322 | 183 | 9 | 49 | 364 | 145 | 423 | 4.94e-24 | 105 |
MS.gene38557.t1 | MTR_3g113630 | 27.950 | 322 | 183 | 9 | 49 | 364 | 145 | 423 | 5.59e-24 | 105 |
MS.gene38557.t1 | MTR_6g053680 | 28.322 | 286 | 151 | 9 | 63 | 343 | 66 | 302 | 2.49e-23 | 103 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38557.t1 | AT5G47820 | 79.955 | 444 | 78 | 5 | 5 | 440 | 8 | 448 | 0.0 | 733 |
MS.gene38557.t1 | AT5G47820 | 79.955 | 444 | 78 | 5 | 5 | 440 | 8 | 448 | 0.0 | 733 |
MS.gene38557.t1 | AT3G50240 | 74.299 | 428 | 102 | 4 | 7 | 430 | 24 | 447 | 0.0 | 642 |
MS.gene38557.t1 | AT3G50240 | 74.299 | 428 | 102 | 4 | 7 | 430 | 24 | 447 | 0.0 | 642 |
MS.gene38557.t1 | AT3G50240 | 74.299 | 428 | 102 | 4 | 7 | 430 | 24 | 447 | 0.0 | 641 |
MS.gene38557.t1 | AT5G60930 | 62.556 | 446 | 155 | 6 | 1 | 442 | 1 | 438 | 1.40e-180 | 539 |
MS.gene38557.t1 | AT5G60930 | 63.657 | 432 | 148 | 5 | 1 | 428 | 1 | 427 | 2.64e-180 | 538 |
MS.gene38557.t1 | AT5G60930 | 62.556 | 446 | 155 | 6 | 1 | 442 | 1 | 438 | 3.63e-180 | 539 |
MS.gene38557.t1 | AT3G50240 | 73.775 | 347 | 83 | 4 | 88 | 430 | 3 | 345 | 2.98e-171 | 505 |
MS.gene38557.t1 | AT2G36200 | 39.216 | 408 | 197 | 13 | 9 | 394 | 13 | 391 | 1.10e-74 | 252 |
MS.gene38557.t1 | AT2G36200 | 39.216 | 408 | 197 | 13 | 9 | 394 | 13 | 391 | 2.03e-74 | 252 |
MS.gene38557.t1 | AT2G28620 | 40.099 | 404 | 194 | 16 | 9 | 394 | 51 | 424 | 6.26e-71 | 242 |
MS.gene38557.t1 | AT2G28620 | 40.099 | 404 | 194 | 16 | 9 | 394 | 51 | 424 | 6.26e-71 | 242 |
MS.gene38557.t1 | AT2G28620 | 40.099 | 404 | 194 | 16 | 9 | 394 | 51 | 424 | 6.51e-71 | 242 |
MS.gene38557.t1 | AT2G37420 | 37.789 | 389 | 195 | 9 | 9 | 380 | 49 | 407 | 8.28e-70 | 239 |
MS.gene38557.t1 | AT2G37420 | 37.789 | 389 | 195 | 9 | 9 | 380 | 49 | 407 | 8.28e-70 | 239 |
MS.gene38557.t1 | AT3G45850 | 37.656 | 401 | 208 | 10 | 9 | 394 | 56 | 429 | 1.43e-69 | 239 |
MS.gene38557.t1 | AT3G45850 | 37.656 | 401 | 208 | 10 | 9 | 394 | 56 | 429 | 1.43e-69 | 239 |
MS.gene38557.t1 | AT3G19050 | 39.646 | 396 | 182 | 13 | 9 | 385 | 194 | 551 | 1.83e-69 | 240 |
MS.gene38557.t1 | AT3G44050 | 38.806 | 402 | 201 | 9 | 9 | 397 | 94 | 463 | 3.89e-68 | 236 |
MS.gene38557.t1 | AT3G17360 | 38.250 | 400 | 200 | 10 | 9 | 394 | 169 | 535 | 7.75e-67 | 232 |
MS.gene38557.t1 | AT3G17360 | 38.250 | 400 | 200 | 10 | 9 | 394 | 169 | 535 | 9.21e-67 | 232 |
MS.gene38557.t1 | AT3G17360 | 38.250 | 400 | 200 | 10 | 9 | 394 | 169 | 535 | 9.95e-67 | 232 |
MS.gene38557.t1 | AT3G63480 | 37.435 | 382 | 181 | 11 | 46 | 420 | 47 | 377 | 8.75e-65 | 215 |
MS.gene38557.t1 | AT3G23670 | 35.075 | 402 | 216 | 9 | 3 | 392 | 91 | 459 | 5.40e-63 | 219 |
MS.gene38557.t1 | AT4G14150 | 36.842 | 380 | 196 | 8 | 3 | 370 | 86 | 433 | 6.21e-63 | 221 |
MS.gene38557.t1 | AT3G63480 | 36.528 | 386 | 183 | 13 | 46 | 420 | 47 | 381 | 1.31e-62 | 210 |
MS.gene38557.t1 | AT3G23670 | 35.075 | 402 | 216 | 9 | 3 | 392 | 91 | 459 | 1.72e-62 | 219 |
MS.gene38557.t1 | AT1G59540 | 35.927 | 437 | 234 | 13 | 5 | 439 | 2 | 394 | 5.33e-62 | 215 |
MS.gene38557.t1 | AT3G49650 | 36.567 | 402 | 201 | 12 | 7 | 393 | 13 | 375 | 3.93e-61 | 213 |
MS.gene38557.t1 | AT3G10180 | 37.113 | 388 | 207 | 10 | 46 | 428 | 39 | 394 | 8.01e-61 | 214 |
MS.gene38557.t1 | AT3G10180 | 37.113 | 388 | 207 | 10 | 46 | 428 | 39 | 394 | 1.01e-60 | 214 |
MS.gene38557.t1 | AT1G72250 | 37.534 | 373 | 189 | 11 | 45 | 415 | 543 | 873 | 2.34e-60 | 213 |
MS.gene38557.t1 | AT1G72250 | 37.534 | 373 | 189 | 11 | 45 | 415 | 534 | 864 | 2.67e-60 | 213 |
MS.gene38557.t1 | AT1G72250 | 37.534 | 373 | 189 | 11 | 45 | 415 | 555 | 885 | 2.79e-60 | 213 |
MS.gene38557.t1 | AT1G72250 | 37.534 | 373 | 189 | 11 | 45 | 415 | 554 | 884 | 2.93e-60 | 213 |
MS.gene38557.t1 | AT2G22610 | 34.442 | 421 | 216 | 13 | 9 | 418 | 418 | 789 | 1.47e-59 | 210 |
MS.gene38557.t1 | AT2G22610 | 34.442 | 421 | 216 | 13 | 9 | 418 | 418 | 789 | 1.51e-59 | 210 |
MS.gene38557.t1 | AT2G22610 | 34.442 | 421 | 216 | 13 | 9 | 418 | 419 | 790 | 1.72e-59 | 210 |
MS.gene38557.t1 | AT3G10310 | 34.527 | 391 | 212 | 9 | 9 | 392 | 364 | 717 | 5.12e-57 | 202 |
MS.gene38557.t1 | AT3G10310 | 34.527 | 391 | 212 | 9 | 9 | 392 | 364 | 717 | 5.42e-57 | 202 |
MS.gene38557.t1 | AT5G65930 | 33.668 | 398 | 216 | 9 | 9 | 402 | 889 | 1242 | 7.07e-57 | 203 |
MS.gene38557.t1 | AT5G65930 | 33.668 | 398 | 216 | 9 | 9 | 402 | 895 | 1248 | 7.58e-57 | 203 |
MS.gene38557.t1 | AT5G65930 | 33.668 | 398 | 216 | 9 | 9 | 402 | 888 | 1241 | 8.23e-57 | 202 |
MS.gene38557.t1 | AT5G27000 | 33.253 | 415 | 225 | 12 | 9 | 410 | 395 | 770 | 1.82e-56 | 201 |
MS.gene38557.t1 | AT1G18370 | 34.910 | 444 | 233 | 15 | 9 | 439 | 32 | 432 | 2.53e-56 | 201 |
MS.gene38557.t1 | AT4G05190 | 37.363 | 364 | 190 | 10 | 9 | 360 | 416 | 753 | 4.52e-56 | 198 |
MS.gene38557.t1 | AT4G05190 | 37.363 | 364 | 190 | 10 | 9 | 360 | 429 | 766 | 5.84e-56 | 198 |
MS.gene38557.t1 | AT3G12020 | 36.341 | 399 | 198 | 14 | 9 | 393 | 70 | 426 | 7.23e-56 | 199 |
MS.gene38557.t1 | AT3G12020 | 36.341 | 399 | 198 | 14 | 9 | 393 | 70 | 426 | 7.23e-56 | 199 |
MS.gene38557.t1 | AT3G12020 | 36.341 | 399 | 198 | 14 | 9 | 393 | 70 | 426 | 1.37e-55 | 199 |
MS.gene38557.t1 | AT3G12020 | 36.341 | 399 | 198 | 14 | 9 | 393 | 70 | 426 | 1.37e-55 | 199 |
MS.gene38557.t1 | AT4G21270 | 36.885 | 366 | 187 | 10 | 9 | 359 | 432 | 768 | 1.20e-54 | 194 |
MS.gene38557.t1 | AT1G18550 | 35.849 | 371 | 183 | 9 | 9 | 364 | 152 | 482 | 1.24e-54 | 194 |
MS.gene38557.t1 | AT1G09170 | 32.587 | 402 | 225 | 11 | 8 | 401 | 434 | 797 | 1.45e-54 | 196 |
MS.gene38557.t1 | AT1G09170 | 32.587 | 402 | 225 | 11 | 8 | 401 | 434 | 797 | 1.81e-54 | 194 |
MS.gene38557.t1 | AT1G21730 | 36.096 | 374 | 200 | 10 | 47 | 419 | 116 | 451 | 1.98e-54 | 195 |
MS.gene38557.t1 | AT1G09170 | 32.668 | 401 | 224 | 11 | 9 | 401 | 435 | 797 | 2.29e-54 | 194 |
MS.gene38557.t1 | AT1G55550 | 31.925 | 426 | 241 | 12 | 9 | 424 | 92 | 478 | 2.59e-54 | 194 |
MS.gene38557.t1 | AT5G02370 | 32.918 | 401 | 198 | 14 | 9 | 392 | 21 | 367 | 5.44e-54 | 189 |
MS.gene38557.t1 | AT4G39050 | 35.071 | 422 | 210 | 13 | 5 | 410 | 95 | 468 | 8.70e-54 | 194 |
MS.gene38557.t1 | AT5G54670 | 37.389 | 337 | 172 | 9 | 46 | 371 | 382 | 690 | 2.49e-53 | 189 |
MS.gene38557.t1 | AT5G06670 | 35.589 | 399 | 204 | 13 | 1 | 389 | 61 | 416 | 2.55e-53 | 190 |
MS.gene38557.t1 | AT5G06670 | 35.589 | 399 | 204 | 13 | 1 | 389 | 61 | 416 | 2.55e-53 | 190 |
MS.gene38557.t1 | AT5G06670 | 35.589 | 399 | 204 | 13 | 1 | 389 | 61 | 416 | 2.55e-53 | 190 |
MS.gene38557.t1 | AT5G06670 | 35.589 | 399 | 204 | 13 | 1 | 389 | 61 | 416 | 3.64e-53 | 190 |
MS.gene38557.t1 | AT5G27550 | 32.787 | 427 | 232 | 13 | 9 | 426 | 133 | 513 | 7.28e-53 | 189 |
MS.gene38557.t1 | AT5G27550 | 32.787 | 427 | 232 | 13 | 9 | 426 | 133 | 513 | 7.28e-53 | 189 |
MS.gene38557.t1 | AT5G54670 | 37.389 | 337 | 172 | 9 | 46 | 371 | 442 | 750 | 8.68e-53 | 189 |
MS.gene38557.t1 | AT5G54670 | 37.389 | 337 | 172 | 9 | 46 | 371 | 442 | 750 | 8.68e-53 | 189 |
MS.gene38557.t1 | AT5G06670 | 35.589 | 399 | 204 | 13 | 1 | 389 | 61 | 416 | 1.01e-52 | 190 |
MS.gene38557.t1 | AT5G06670 | 35.589 | 399 | 204 | 13 | 1 | 389 | 61 | 416 | 1.01e-52 | 190 |
MS.gene38557.t1 | AT1G09170 | 33.161 | 386 | 212 | 11 | 8 | 385 | 434 | 781 | 1.93e-52 | 189 |
MS.gene38557.t1 | AT1G09170 | 33.161 | 386 | 212 | 11 | 8 | 385 | 434 | 781 | 1.93e-52 | 189 |
MS.gene38557.t1 | AT2G21380 | 34.129 | 419 | 218 | 13 | 5 | 410 | 101 | 474 | 5.33e-52 | 188 |
MS.gene38557.t1 | AT2G21380 | 34.129 | 419 | 218 | 13 | 5 | 410 | 101 | 474 | 5.33e-52 | 188 |
MS.gene38557.t1 | AT2G47500 | 35.246 | 366 | 194 | 11 | 45 | 407 | 441 | 766 | 9.20e-52 | 187 |
MS.gene38557.t1 | AT2G47500 | 35.246 | 366 | 194 | 11 | 45 | 407 | 441 | 766 | 1.01e-51 | 187 |
MS.gene38557.t1 | AT1G12430 | 34.392 | 378 | 193 | 13 | 9 | 365 | 71 | 414 | 1.24e-51 | 187 |
MS.gene38557.t1 | AT1G12430 | 34.392 | 378 | 193 | 13 | 9 | 365 | 71 | 414 | 1.25e-51 | 187 |
MS.gene38557.t1 | AT4G27180 | 36.288 | 361 | 194 | 10 | 9 | 360 | 388 | 721 | 1.47e-50 | 182 |
MS.gene38557.t1 | AT4G27180 | 36.288 | 361 | 194 | 10 | 9 | 360 | 388 | 721 | 1.47e-50 | 182 |
MS.gene38557.t1 | AT3G16060 | 34.555 | 382 | 194 | 10 | 9 | 378 | 170 | 507 | 2.11e-50 | 181 |
MS.gene38557.t1 | AT3G54870 | 32.099 | 405 | 227 | 12 | 22 | 410 | 117 | 489 | 3.90e-50 | 183 |
MS.gene38557.t1 | AT5G06670 | 34.804 | 408 | 204 | 14 | 1 | 389 | 61 | 425 | 3.95e-50 | 183 |
MS.gene38557.t1 | AT5G06670 | 34.804 | 408 | 204 | 14 | 1 | 389 | 61 | 425 | 3.95e-50 | 183 |
MS.gene38557.t1 | AT3G54870 | 32.099 | 405 | 227 | 12 | 22 | 410 | 117 | 489 | 3.99e-50 | 183 |
MS.gene38557.t1 | AT3G54870 | 32.099 | 405 | 227 | 12 | 22 | 410 | 117 | 489 | 4.31e-50 | 183 |
MS.gene38557.t1 | AT5G66310 | 32.500 | 440 | 234 | 14 | 9 | 429 | 19 | 414 | 6.65e-50 | 182 |
MS.gene38557.t1 | AT5G66310 | 32.500 | 440 | 234 | 14 | 9 | 429 | 19 | 414 | 6.65e-50 | 182 |
MS.gene38557.t1 | AT5G66310 | 32.500 | 440 | 234 | 14 | 9 | 429 | 19 | 414 | 6.65e-50 | 182 |
MS.gene38557.t1 | AT1G73860 | 34.511 | 368 | 191 | 10 | 9 | 364 | 510 | 839 | 7.51e-50 | 182 |
MS.gene38557.t1 | AT1G73860 | 34.783 | 368 | 190 | 11 | 9 | 364 | 427 | 756 | 7.92e-50 | 182 |
MS.gene38557.t1 | AT4G24170 | 36.436 | 376 | 187 | 12 | 3 | 370 | 2 | 333 | 2.09e-49 | 181 |
MS.gene38557.t1 | AT4G24170 | 36.436 | 376 | 187 | 12 | 3 | 370 | 2 | 333 | 2.09e-49 | 181 |
MS.gene38557.t1 | AT5G27950 | 33.947 | 380 | 208 | 15 | 9 | 384 | 80 | 420 | 2.92e-49 | 177 |
MS.gene38557.t1 | AT3G44730 | 32.029 | 409 | 223 | 14 | 8 | 399 | 422 | 792 | 1.27e-48 | 179 |
MS.gene38557.t1 | AT3G44730 | 32.029 | 409 | 223 | 14 | 8 | 399 | 422 | 792 | 1.27e-48 | 179 |
MS.gene38557.t1 | AT3G16630 | 32.821 | 390 | 204 | 10 | 9 | 374 | 194 | 549 | 1.31e-48 | 177 |
MS.gene38557.t1 | AT3G16630 | 32.821 | 390 | 204 | 10 | 9 | 374 | 194 | 549 | 1.31e-48 | 177 |
MS.gene38557.t1 | AT3G51150 | 32.527 | 455 | 246 | 15 | 1 | 436 | 8 | 420 | 1.32e-48 | 179 |
MS.gene38557.t1 | AT3G51150 | 32.527 | 455 | 246 | 15 | 1 | 436 | 8 | 420 | 1.32e-48 | 179 |
MS.gene38557.t1 | AT3G51150 | 32.527 | 455 | 246 | 15 | 1 | 436 | 8 | 420 | 1.32e-48 | 179 |
MS.gene38557.t1 | AT3G51150 | 32.527 | 455 | 246 | 15 | 1 | 436 | 8 | 420 | 1.32e-48 | 179 |
MS.gene38557.t1 | AT3G44730 | 32.029 | 409 | 223 | 14 | 8 | 399 | 377 | 747 | 1.35e-48 | 179 |
MS.gene38557.t1 | AT3G44730 | 32.029 | 409 | 223 | 14 | 8 | 399 | 377 | 747 | 1.35e-48 | 179 |
MS.gene38557.t1 | AT3G43210 | 33.835 | 399 | 215 | 10 | 9 | 400 | 30 | 386 | 2.41e-48 | 177 |
MS.gene38557.t1 | AT3G43210 | 33.835 | 399 | 215 | 10 | 9 | 400 | 30 | 386 | 2.41e-48 | 177 |
MS.gene38557.t1 | AT3G43210 | 33.835 | 399 | 215 | 10 | 9 | 400 | 30 | 386 | 2.41e-48 | 177 |
MS.gene38557.t1 | AT3G43210 | 33.835 | 399 | 215 | 10 | 9 | 400 | 30 | 386 | 2.41e-48 | 177 |
MS.gene38557.t1 | AT3G43210 | 33.835 | 399 | 215 | 10 | 9 | 400 | 30 | 386 | 2.41e-48 | 177 |
MS.gene38557.t1 | AT1G01950 | 31.042 | 451 | 246 | 14 | 9 | 441 | 61 | 464 | 4.34e-48 | 177 |
MS.gene38557.t1 | AT1G01950 | 31.042 | 451 | 246 | 14 | 9 | 441 | 61 | 464 | 4.83e-48 | 176 |
MS.gene38557.t1 | AT1G01950 | 31.042 | 451 | 246 | 14 | 9 | 441 | 61 | 464 | 5.25e-48 | 176 |
MS.gene38557.t1 | AT1G18410 | 36.137 | 321 | 169 | 7 | 45 | 364 | 533 | 818 | 1.65e-47 | 175 |
MS.gene38557.t1 | AT1G18410 | 36.137 | 321 | 169 | 7 | 45 | 364 | 533 | 818 | 1.65e-47 | 175 |
MS.gene38557.t1 | AT1G18410 | 36.137 | 321 | 169 | 7 | 45 | 364 | 676 | 961 | 2.01e-47 | 175 |
MS.gene38557.t1 | AT1G18410 | 35.514 | 321 | 163 | 7 | 45 | 364 | 523 | 800 | 2.70e-47 | 175 |
MS.gene38557.t1 | AT1G59540 | 37.048 | 332 | 171 | 8 | 108 | 439 | 9 | 302 | 2.70e-47 | 173 |
MS.gene38557.t1 | AT1G18410 | 35.514 | 321 | 163 | 7 | 45 | 364 | 676 | 953 | 3.21e-47 | 174 |
MS.gene38557.t1 | AT2G21300 | 33.524 | 349 | 188 | 8 | 46 | 392 | 70 | 376 | 1.30e-46 | 172 |
MS.gene38557.t1 | AT2G21300 | 33.524 | 349 | 188 | 8 | 46 | 392 | 70 | 376 | 1.30e-46 | 172 |
MS.gene38557.t1 | AT2G21300 | 33.524 | 349 | 188 | 8 | 46 | 392 | 70 | 376 | 1.30e-46 | 172 |
MS.gene38557.t1 | AT2G21300 | 33.524 | 349 | 188 | 8 | 46 | 392 | 70 | 376 | 1.30e-46 | 172 |
MS.gene38557.t1 | AT2G21300 | 33.524 | 349 | 188 | 8 | 46 | 392 | 70 | 376 | 1.30e-46 | 172 |
MS.gene38557.t1 | AT3G20150 | 30.588 | 425 | 228 | 14 | 2 | 401 | 98 | 480 | 8.12e-45 | 167 |
MS.gene38557.t1 | AT1G63640 | 32.055 | 365 | 203 | 10 | 9 | 364 | 463 | 791 | 8.43e-45 | 167 |
MS.gene38557.t1 | AT1G63640 | 32.055 | 365 | 203 | 10 | 9 | 364 | 473 | 801 | 8.82e-45 | 167 |
MS.gene38557.t1 | AT1G63640 | 32.055 | 365 | 203 | 10 | 9 | 364 | 473 | 801 | 9.07e-45 | 167 |
MS.gene38557.t1 | AT1G63640 | 32.055 | 365 | 203 | 10 | 9 | 364 | 473 | 801 | 9.07e-45 | 167 |
MS.gene38557.t1 | AT3G20150 | 30.588 | 425 | 228 | 14 | 2 | 401 | 98 | 480 | 9.91e-45 | 167 |
MS.gene38557.t1 | AT1G63640 | 30.769 | 364 | 202 | 8 | 9 | 364 | 473 | 794 | 1.50e-44 | 167 |
MS.gene38557.t1 | AT5G41310 | 31.593 | 364 | 188 | 9 | 9 | 364 | 423 | 733 | 1.59e-44 | 166 |
MS.gene38557.t1 | AT1G09170 | 31.421 | 401 | 195 | 13 | 8 | 401 | 434 | 761 | 7.12e-44 | 165 |
MS.gene38557.t1 | AT4G38950 | 33.333 | 348 | 190 | 10 | 46 | 392 | 59 | 365 | 1.74e-43 | 163 |
MS.gene38557.t1 | AT4G38950 | 33.333 | 348 | 190 | 10 | 46 | 392 | 59 | 365 | 1.74e-43 | 163 |
MS.gene38557.t1 | AT4G38950 | 33.333 | 348 | 190 | 10 | 46 | 392 | 59 | 365 | 1.74e-43 | 163 |
MS.gene38557.t1 | AT4G38950 | 33.333 | 348 | 190 | 10 | 46 | 392 | 59 | 365 | 1.74e-43 | 163 |
MS.gene38557.t1 | AT4G38950 | 33.333 | 348 | 190 | 10 | 46 | 392 | 59 | 365 | 1.74e-43 | 163 |
MS.gene38557.t1 | AT1G09170 | 32.827 | 329 | 178 | 9 | 8 | 329 | 434 | 726 | 6.93e-43 | 161 |
MS.gene38557.t1 | AT1G09170 | 32.827 | 329 | 178 | 9 | 8 | 329 | 434 | 726 | 6.93e-43 | 161 |
MS.gene38557.t1 | AT1G01950 | 31.421 | 366 | 200 | 10 | 84 | 441 | 1 | 323 | 4.07e-36 | 141 |
MS.gene38557.t1 | AT5G27950 | 34.409 | 279 | 152 | 8 | 106 | 384 | 7 | 254 | 6.58e-35 | 135 |
MS.gene38557.t1 | AT5G65460 | 31.755 | 359 | 194 | 12 | 9 | 362 | 139 | 451 | 1.58e-34 | 137 |
MS.gene38557.t1 | AT5G65460 | 31.755 | 359 | 194 | 12 | 9 | 362 | 139 | 451 | 1.61e-34 | 137 |
MS.gene38557.t1 | AT5G65460 | 31.755 | 359 | 194 | 12 | 9 | 362 | 139 | 451 | 1.63e-34 | 137 |
MS.gene38557.t1 | AT5G65460 | 31.755 | 359 | 194 | 12 | 9 | 362 | 139 | 451 | 1.97e-34 | 137 |
MS.gene38557.t1 | AT5G65460 | 31.956 | 363 | 195 | 13 | 9 | 362 | 139 | 458 | 6.72e-34 | 135 |
MS.gene38557.t1 | AT3G51150 | 38.525 | 244 | 127 | 8 | 200 | 436 | 40 | 267 | 1.66e-32 | 131 |
MS.gene38557.t1 | AT5G42490 | 33.225 | 307 | 159 | 9 | 3 | 301 | 4 | 272 | 2.88e-30 | 124 |
MS.gene38557.t1 | AT5G42490 | 33.225 | 307 | 159 | 9 | 3 | 301 | 4 | 272 | 3.12e-30 | 124 |
MS.gene38557.t1 | AT5G10470 | 30.383 | 418 | 227 | 18 | 9 | 419 | 143 | 503 | 3.45e-28 | 118 |
MS.gene38557.t1 | AT5G10470 | 30.383 | 418 | 227 | 18 | 9 | 419 | 143 | 503 | 4.30e-28 | 118 |
MS.gene38557.t1 | AT4G14330 | 29.141 | 326 | 185 | 10 | 42 | 363 | 84 | 367 | 2.53e-24 | 106 |
MS.gene38557.t1 | AT1G20060 | 32.110 | 327 | 167 | 12 | 29 | 340 | 139 | 425 | 5.55e-22 | 99.8 |
MS.gene38557.t1 | AT1G20060 | 32.110 | 327 | 167 | 12 | 29 | 340 | 139 | 425 | 5.67e-22 | 99.8 |
MS.gene38557.t1 | AT1G20060 | 32.110 | 327 | 167 | 12 | 29 | 340 | 139 | 425 | 5.71e-22 | 99.8 |
MS.gene38557.t1 | AT1G20060 | 32.110 | 327 | 167 | 12 | 29 | 340 | 139 | 425 | 6.04e-22 | 99.4 |
MS.gene38557.t1 | AT1G20060 | 32.110 | 327 | 167 | 12 | 29 | 340 | 139 | 425 | 6.08e-22 | 99.4 |
MS.gene38557.t1 | AT1G20060 | 32.110 | 327 | 167 | 12 | 29 | 340 | 139 | 425 | 6.78e-22 | 99.4 |
MS.gene38557.t1 | AT1G20060 | 32.110 | 327 | 167 | 12 | 29 | 340 | 139 | 425 | 6.83e-22 | 99.4 |
MS.gene38557.t1 | AT1G20060 | 32.110 | 327 | 167 | 12 | 29 | 340 | 139 | 425 | 6.83e-22 | 99.4 |
MS.gene38557.t1 | AT1G20060 | 32.110 | 327 | 167 | 12 | 29 | 340 | 139 | 425 | 6.95e-22 | 99.4 |
MS.gene38557.t1 | AT5G65460 | 32.340 | 235 | 118 | 6 | 128 | 362 | 12 | 205 | 1.53e-20 | 95.1 |
MS.gene38557.t1 | AT5G23910 | 26.433 | 314 | 178 | 11 | 46 | 359 | 54 | 314 | 4.76e-18 | 87.4 |
MS.gene38557.t1 | AT5G23910 | 26.433 | 314 | 178 | 11 | 46 | 359 | 58 | 318 | 5.41e-18 | 87.0 |
MS.gene38557.t1 | AT1G20060 | 30.205 | 341 | 167 | 14 | 29 | 340 | 139 | 437 | 4.43e-13 | 72.0 |
Find 97 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTACATTTGATCATGTTTA+TGG | 0.105027 | 3.2:+84932252 | MS.gene38557:CDS |
TACTCACAACAGGCTTATTT+TGG | 0.158232 | 3.2:-84935205 | None:intergenic |
CTTGAGGTATTATTCCTATT+TGG | 0.171128 | 3.2:-84932512 | None:intergenic |
TTGCATACTTCAAAGTGTTT+AGG | 0.230610 | 3.2:-84935166 | None:intergenic |
ACTTCATTGCAGACAGGTTC+TGG | 0.232892 | 3.2:+84932450 | MS.gene38557:intron |
TTTAAAGAAGGTTTCCAAAT+AGG | 0.243144 | 3.2:+84932498 | MS.gene38557:CDS |
AGCTTCTCGTCCGCGATTAA+TGG | 0.248597 | 3.2:-84930999 | None:intergenic |
AGAAGAAGTAAGAGATTTAC+TGG | 0.249543 | 3.2:+84932732 | MS.gene38557:CDS |
CAACAAAATTGGGAGCTTAA+AGG | 0.252629 | 3.2:+84932551 | MS.gene38557:CDS |
TGCATACTTCAAAGTGTTTA+GGG | 0.277281 | 3.2:-84935165 | None:intergenic |
GATTGTGTAGCCGTCGTTGC+TGG | 0.318677 | 3.2:+84931035 | MS.gene38557:CDS |
ACTTATTATATAGGGTCTTA+AGG | 0.346359 | 3.2:+84935762 | MS.gene38557:intron |
AAAACATACACCATGGGAAC+TGG | 0.346642 | 3.2:+84932474 | MS.gene38557:CDS |
GTAAGTTTACTGTCCCTATA+TGG | 0.347480 | 3.2:-84933999 | None:intergenic |
AAATCAACATACCTCGATAA+AGG | 0.363137 | 3.2:-84932601 | None:intergenic |
AATGGTGTTATAACCCTTGC+AGG | 0.369429 | 3.2:+84932850 | MS.gene38557:CDS |
GCGCATTTGCTCTAATGTTA+TGG | 0.376904 | 3.2:-84933664 | None:intergenic |
GCTATAATTCAGGTGCAAAT+TGG | 0.379966 | 3.2:+84932219 | MS.gene38557:intron |
AATGGCTGCTTGCCTCGAAC+AGG | 0.382303 | 3.2:+84932906 | MS.gene38557:CDS |
GGATCCTCAAGTAGAGCAAC+TGG | 0.397008 | 3.2:+84932928 | MS.gene38557:CDS |
TGTGTTTCTCCACTTGTTGA+TGG | 0.397899 | 3.2:+84932312 | MS.gene38557:CDS |
AATGCTACTGTTCTCGCATA+TGG | 0.411595 | 3.2:+84932351 | MS.gene38557:CDS |
AGGTGTTCATGTTCCATATA+GGG | 0.417594 | 3.2:+84933986 | MS.gene38557:CDS |
TGGCTCATCTGAGGAAGTTC+AGG | 0.419684 | 3.2:+84935412 | MS.gene38557:CDS |
TCAGAACGAGCTAAAAGAAC+AGG | 0.422378 | 3.2:+84933777 | MS.gene38557:CDS |
GATGTCTCACGAATTTGTAT+TGG | 0.427594 | 3.2:-84932826 | None:intergenic |
ACAACAACTGGAGTGTTTGC+AGG | 0.430562 | 3.2:+84935367 | MS.gene38557:CDS |
GTCTCACGAATTTGTATTGG+CGG | 0.434962 | 3.2:-84932823 | None:intergenic |
CTTCATTGCAGACAGGTTCT+GGG | 0.436319 | 3.2:+84932451 | MS.gene38557:intron |
TGTCACAACACTAAAAGAAA+TGG | 0.437143 | 3.2:+84932888 | MS.gene38557:CDS |
CTTGTTGATGGTTTGTTCCA+AGG | 0.445438 | 3.2:+84932324 | MS.gene38557:CDS |
ATTTGTATTGGCGGCTTCCC+AGG | 0.445801 | 3.2:-84932814 | None:intergenic |
TAACATTACCAAGTGCTAGA+AGG | 0.448478 | 3.2:-84933929 | None:intergenic |
GAACAGTAGCATTATATCCT+TGG | 0.448555 | 3.2:-84932341 | None:intergenic |
CTGCATTTAGTAGATCTTGC+CGG | 0.464657 | 3.2:+84933753 | MS.gene38557:CDS |
ATCGCGGACGAGAAGCTTCA+AGG | 0.465166 | 3.2:+84931005 | MS.gene38557:CDS |
TCCTCAGCATTAATATCAGC+AGG | 0.468259 | 3.2:-84935140 | None:intergenic |
GATCATGTTTATGGAAGCAC+TGG | 0.470732 | 3.2:+84932261 | MS.gene38557:CDS |
GCAGAGCTTTGTGCTCGTGC+CGG | 0.471447 | 3.2:+84935389 | MS.gene38557:CDS |
CGTCGTTGCTGGGAAGCCTC+AGG | 0.474935 | 3.2:+84931046 | MS.gene38557:CDS |
CTCTAATGTTATGGTGAAGA+TGG | 0.476762 | 3.2:-84933655 | None:intergenic |
ATGGGAACTGGGTTTAAAGA+AGG | 0.483558 | 3.2:+84932486 | MS.gene38557:CDS |
CAAATTCGTGAGACATCAAA+TGG | 0.484271 | 3.2:+84932832 | MS.gene38557:CDS |
ATAGGGACAGTAAACTTACT+AGG | 0.487636 | 3.2:+84934003 | MS.gene38557:CDS |
AAGGTGTTCATGTTCCATAT+AGG | 0.488050 | 3.2:+84933985 | MS.gene38557:CDS |
TTCTTTAAACCCAGTTCCCA+TGG | 0.488057 | 3.2:-84932484 | None:intergenic |
AATGCATTATCAACCTGGAT+TGG | 0.490107 | 3.2:-84932969 | None:intergenic |
TACTGTTCTCGCATATGGTC+AGG | 0.495777 | 3.2:+84932356 | MS.gene38557:CDS |
GAGCTTTGTGCTCGTGCCGG+TGG | 0.514259 | 3.2:+84935392 | MS.gene38557:CDS |
AGCAAAACAGAAACTGCAAA+TGG | 0.515331 | 3.2:+84932769 | MS.gene38557:CDS |
AACAAAGGCCTTCTAGCACT+TGG | 0.521962 | 3.2:+84933921 | MS.gene38557:CDS |
TGAAAGTTGCGGTTCATGTA+CGG | 0.523954 | 3.2:+84930976 | MS.gene38557:CDS |
ATTGTGTAGCCGTCGTTGCT+GGG | 0.526352 | 3.2:+84931036 | MS.gene38557:CDS |
TGTCGCAGAACAAAATGAAA+AGG | 0.527088 | 3.2:+84935858 | MS.gene38557:CDS |
TTATATAGGGTCTTAAGGAA+AGG | 0.528771 | 3.2:+84935767 | MS.gene38557:intron |
TACGGTGTTCATGAAGTTCA+CGG | 0.532245 | 3.2:-84935825 | None:intergenic |
AACAGCAGAACTGTCATGAT+AGG | 0.532555 | 3.2:+84934449 | MS.gene38557:CDS |
TACTTGAGGATCCCTGTTCG+AGG | 0.535660 | 3.2:-84932918 | None:intergenic |
AACAAAACATTCATAACTTG+AGG | 0.535778 | 3.2:-84932528 | None:intergenic |
AATATCAGCAGGACTTATGC+AGG | 0.541897 | 3.2:-84935129 | None:intergenic |
AACTCTCGTACTACTATGGA+AGG | 0.542422 | 3.2:+84930936 | None:intergenic |
GCTCCCAGTTGCTCTACTTG+AGG | 0.544099 | 3.2:-84932932 | None:intergenic |
CAAATATGAACAACCAATCC+AGG | 0.548254 | 3.2:+84932956 | MS.gene38557:CDS |
GAAACTGCAAATGGACATGC+AGG | 0.559220 | 3.2:+84932778 | MS.gene38557:CDS |
GATGAAAAGAAGCGAAAGGA+AGG | 0.559586 | 3.2:+84933966 | MS.gene38557:CDS |
TGACTTCTGTAGACCCTGCA+AGG | 0.563379 | 3.2:-84932864 | None:intergenic |
AAACATACACCATGGGAACT+GGG | 0.568974 | 3.2:+84932475 | MS.gene38557:CDS |
TGGTGAAGATGGCATGAGAT+CGG | 0.569772 | 3.2:-84933644 | None:intergenic |
GTTCATGAAGTTCACGGCAA+AGG | 0.572612 | 3.2:-84935819 | None:intergenic |
TCGTGCCGGTGGCTCATCTG+AGG | 0.574385 | 3.2:+84935403 | MS.gene38557:CDS |
CTCGTACTACTATGGAAGGA+GGG | 0.574605 | 3.2:+84930940 | None:intergenic |
TCCTGCTGATATTAATGCTG+AGG | 0.579672 | 3.2:+84935139 | MS.gene38557:CDS |
GGTAATGTTATTAGTGCACT+TGG | 0.581743 | 3.2:+84933942 | MS.gene38557:CDS |
TATTGGCGGCTTCCCAGGAG+AGG | 0.584030 | 3.2:-84932809 | None:intergenic |
GCTAAAAGAACAGGGTCTGA+TGG | 0.585470 | 3.2:+84933786 | MS.gene38557:CDS |
GTTGCATGTTTCCTTTATCG+AGG | 0.595513 | 3.2:+84932590 | MS.gene38557:CDS |
TTTAGCATTTCACTGGACAT+GGG | 0.601576 | 3.2:-84935338 | None:intergenic |
CATGCAACTGAAATTCACTC+TGG | 0.602675 | 3.2:-84932575 | None:intergenic |
TCAGGAGTTCATATTAACAA+AGG | 0.606497 | 3.2:+84933906 | MS.gene38557:intron |
ATGGCTGCTTGCCTCGAACA+GGG | 0.606588 | 3.2:+84932907 | MS.gene38557:CDS |
TTCTTCAAACATGTCACTCG+AGG | 0.610993 | 3.2:-84932289 | None:intergenic |
AACTTCCTCAGATGAGCCAC+CGG | 0.612910 | 3.2:-84935408 | None:intergenic |
TCTCGTACTACTATGGAAGG+AGG | 0.622564 | 3.2:+84930939 | None:intergenic |
CTGCGACAGAGCATCTACTA+CGG | 0.626696 | 3.2:-84935843 | None:intergenic |
TGGTGATGAAAAGAAGCGAA+AGG | 0.638455 | 3.2:+84933962 | MS.gene38557:CDS |
TGGAACAAACCATCAACAAG+TGG | 0.641100 | 3.2:-84932321 | None:intergenic |
CTGAGGCTTCCCAGCAACGA+CGG | 0.641916 | 3.2:-84931045 | None:intergenic |
TTCTGGGAAAACATACACCA+TGG | 0.643791 | 3.2:+84932467 | MS.gene38557:CDS |
AAATTGTTGCGTGAAAGTTG+CGG | 0.649510 | 3.2:+84930965 | MS.gene38557:CDS |
GACTTCTGTAGACCCTGCAA+GGG | 0.652135 | 3.2:-84932863 | None:intergenic |
TCTTCAAACATGTCACTCGA+GGG | 0.652246 | 3.2:-84932288 | None:intergenic |
TCTGGGAAAACATACACCAT+GGG | 0.658593 | 3.2:+84932468 | MS.gene38557:CDS |
CAGAACGAGCTAAAAGAACA+GGG | 0.669088 | 3.2:+84933778 | MS.gene38557:CDS |
TCATGTACGGCCATTAATCG+CGG | 0.671018 | 3.2:+84930989 | MS.gene38557:CDS |
ATGGTGTTATAACCCTTGCA+GGG | 0.672246 | 3.2:+84932851 | MS.gene38557:CDS |
GATCCTCAAGTAGAGCAACT+GGG | 0.673522 | 3.2:+84932929 | MS.gene38557:CDS |
TCGTACTACTATGGAAGGAG+GGG | 0.676295 | 3.2:+84930941 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATCTTTTAACTTATTATATA+GGG | + | chr3.2:84935754-84935773 | MS.gene38557:intron | 10.0% |
!! | AAAAATAGATAGGTTAAAAT+CGG | + | chr3.2:84931235-84931254 | MS.gene38557:intron | 15.0% |
!! | GAATTAAAATAATAAGCAAT+TGG | - | chr3.2:84932027-84932046 | None:intergenic | 15.0% |
!! | TAAAATATATGAGATTCATA+TGG | - | chr3.2:84934172-84934191 | None:intergenic | 15.0% |
!! | TCTATGTTTGATATTAAAAA+TGG | + | chr3.2:84932058-84932077 | MS.gene38557:intron | 15.0% |
!! | TGAAATGTATATAAAAATAG+TGG | - | chr3.2:84935692-84935711 | None:intergenic | 15.0% |
!! | TTTATATACATTTCATACAA+AGG | + | chr3.2:84935697-84935716 | MS.gene38557:intron | 15.0% |
!!! | AGGTTAAAAATTAATTTTAG+GGG | + | chr3.2:84931594-84931613 | MS.gene38557:intron | 15.0% |
!!! | ATAAGTATTTATTTTCTTCT+AGG | - | chr3.2:84934283-84934302 | None:intergenic | 15.0% |
!!! | CAGGTTAAAAATTAATTTTA+GGG | + | chr3.2:84931593-84931612 | MS.gene38557:intron | 15.0% |
!!! | CATCTTTTAACTTATTATAT+AGG | + | chr3.2:84935753-84935772 | MS.gene38557:intron | 15.0% |
!!! | GAAAATATTTTATAGATAGA+AGG | + | chr3.2:84934096-84934115 | MS.gene38557:intron | 15.0% |
!!! | GCTTATTATTTTAATTCATT+GGG | + | chr3.2:84932030-84932049 | MS.gene38557:intron | 15.0% |
!!! | TGCTTATTATTTTAATTCAT+TGG | + | chr3.2:84932029-84932048 | MS.gene38557:intron | 15.0% |
!! | AATGAAGTAAAAATGTCAAA+TGG | - | chr3.2:84932438-84932457 | None:intergenic | 20.0% |
!! | AGATTTCAATTGAAGATAAA+AGG | - | chr3.2:84931943-84931962 | None:intergenic | 20.0% |
!! | ATATGTTCACAAATTATGTT+TGG | + | chr3.2:84931437-84931456 | MS.gene38557:intron | 20.0% |
!! | ATCTGATAGTTTACTTAATT+GGG | + | chr3.2:84931271-84931290 | MS.gene38557:intron | 20.0% |
!! | GTTTAACAAAAAAAAAATCC+AGG | + | chr3.2:84931574-84931593 | MS.gene38557:intron | 20.0% |
!! | TTAAAACAAAGAGATAACAA+AGG | - | chr3.2:84933175-84933194 | None:intergenic | 20.0% |
!! | TTAAGATAGGTTATTAACTT+TGG | - | chr3.2:84934924-84934943 | None:intergenic | 20.0% |
!! | TTGAATAATAAGGGTAAATA+TGG | + | chr3.2:84934640-84934659 | MS.gene38557:intron | 20.0% |
!! | TTTACATTTGATCATGTTTA+TGG | + | chr3.2:84932252-84932271 | MS.gene38557:CDS | 20.0% |
!! | TTTGTGAACATATAATCTAA+AGG | - | chr3.2:84931430-84931449 | None:intergenic | 20.0% |
!!! | AACATGATTTTGATTGATAT+AGG | + | chr3.2:84931366-84931385 | MS.gene38557:intron | 20.0% |
!!! | AACTCTTTAATTTTGGAATT+TGG | + | chr3.2:84931742-84931761 | MS.gene38557:intron | 20.0% |
!!! | AATGTTTTGTTCAACAAAAT+TGG | + | chr3.2:84932540-84932559 | MS.gene38557:CDS | 20.0% |
!!! | ACATGATTTTGATTGATATA+GGG | + | chr3.2:84931367-84931386 | MS.gene38557:intron | 20.0% |
!!! | ACTTTCTCAACATTTATTTT+AGG | + | chr3.2:84931334-84931353 | MS.gene38557:intron | 20.0% |
!!! | ATAGATGAAACTTTTCTTTT+CGG | + | chr3.2:84933299-84933318 | MS.gene38557:intron | 20.0% |
!!! | ATATTAGATATTTCCTCTTT+TGG | + | chr3.2:84931145-84931164 | MS.gene38557:intron | 20.0% |
!!! | ATGTAGAATTGAGTTTTTTT+AGG | - | chr3.2:84931658-84931677 | None:intergenic | 20.0% |
!!! | ATGTTTTGTTCAACAAAATT+GGG | + | chr3.2:84932541-84932560 | MS.gene38557:CDS | 20.0% |
!!! | ATTATTATCTGAATTTTACG+TGG | - | chr3.2:84933115-84933134 | None:intergenic | 20.0% |
!!! | ATTTTATTTTCAAAGAGAGT+TGG | + | chr3.2:84931973-84931992 | MS.gene38557:intron | 20.0% |
!!! | CCAGGTTAAAAATTAATTTT+AGG | + | chr3.2:84931592-84931611 | MS.gene38557:intron | 20.0% |
!!! | CCTAAAATTAATTTTTAACC+TGG | - | chr3.2:84931595-84931614 | None:intergenic | 20.0% |
!!! | CTTTTTTAAAATTCTTCTCT+AGG | + | chr3.2:84935304-84935323 | MS.gene38557:intron | 20.0% |
!!! | GATTTATTTTTCACAATGAT+AGG | + | chr3.2:84931865-84931884 | MS.gene38557:intron | 20.0% |
!!! | TATTTTATAGATAGAAGGAT+TGG | + | chr3.2:84934101-84934120 | MS.gene38557:intron | 20.0% |
!!! | TTCAAAATCAATTTTTGTCA+CGG | - | chr3.2:84931472-84931491 | None:intergenic | 20.0% |
!!! | TTGAAATTTTTCCAACTAAA+TGG | + | chr3.2:84934988-84935007 | MS.gene38557:intron | 20.0% |
!!! | TTTAGAATTTTTTGTTTTCG+TGG | + | chr3.2:84931998-84932017 | MS.gene38557:intron | 20.0% |
! | AAATAATAAACACAGTGATC+CGG | - | chr3.2:84935635-84935654 | None:intergenic | 25.0% |
! | AACAAAACATTCATAACTTG+AGG | - | chr3.2:84932531-84932550 | None:intergenic | 25.0% |
! | AACTTTGTGATGTAAATGAT+GGG | - | chr3.2:84934215-84934234 | None:intergenic | 25.0% |
! | AAGTAAACAAAAAAGAGCAA+CGG | - | chr3.2:84934379-84934398 | None:intergenic | 25.0% |
! | ACTTATTATATAGGGTCTTA+AGG | + | chr3.2:84935762-84935781 | MS.gene38557:intron | 25.0% |
! | AGACGAAGATTAAAAATGTT+AGG | - | chr3.2:84934896-84934915 | None:intergenic | 25.0% |
! | AGCCATTTAATGTTTAAATC+AGG | + | chr3.2:84933888-84933907 | MS.gene38557:intron | 25.0% |
! | CTCCTGATTTAAACATTAAA+TGG | - | chr3.2:84933893-84933912 | None:intergenic | 25.0% |
! | GATCTGATAGTTTACTTAAT+TGG | + | chr3.2:84931270-84931289 | MS.gene38557:intron | 25.0% |
! | TACATTTCATACAAAGGAAA+CGG | + | chr3.2:84935703-84935722 | MS.gene38557:intron | 25.0% |
! | TCAGGTATAGTTATTACTAA+CGG | + | chr3.2:84932374-84932393 | MS.gene38557:intron | 25.0% |
! | TTAAACAAGAAACTTGTCTA+TGG | + | chr3.2:84934324-84934343 | MS.gene38557:intron | 25.0% |
! | TTCACAAATTATGTTTGGTT+TGG | + | chr3.2:84931442-84931461 | MS.gene38557:intron | 25.0% |
! | TTTAAAGAAGGTTTCCAAAT+AGG | + | chr3.2:84932498-84932517 | MS.gene38557:CDS | 25.0% |
!! | AAAAAGTGAAATGATTTTGC+AGG | + | chr3.2:84934412-84934431 | MS.gene38557:intron | 25.0% |
!! | AACATTTTTAATCTTCGTCT+TGG | + | chr3.2:84934896-84934915 | MS.gene38557:intron | 25.0% |
!! | ATTTGACTTCATTCTATTTC+TGG | + | chr3.2:84931298-84931317 | MS.gene38557:intron | 25.0% |
!! | CAGCTATCATTAGAATTTTT+GGG | - | chr3.2:84933693-84933712 | None:intergenic | 25.0% |
!! | TCTTTTCGGAATTTAATAGA+TGG | + | chr3.2:84933313-84933332 | MS.gene38557:intron | 25.0% |
!! | TGTGTTCTGTATTTTTCATA+AGG | + | chr3.2:84934964-84934983 | MS.gene38557:intron | 25.0% |
!!! | AAATGTTAGGTTGAAGTTAA+AGG | - | chr3.2:84934883-84934902 | None:intergenic | 25.0% |
!!! | AACATCAAATTTTAGCTTCA+AGG | + | chr3.2:84931621-84931640 | MS.gene38557:intron | 25.0% |
!!! | AGCTTTTGCTTTGAATAATA+AGG | + | chr3.2:84934630-84934649 | MS.gene38557:intron | 25.0% |
!!! | CGATTGTTCTAAAAATAGAT+AGG | + | chr3.2:84931225-84931244 | MS.gene38557:intron | 25.0% |
!!! | GCTTTTGCTTTGAATAATAA+GGG | + | chr3.2:84934631-84934650 | MS.gene38557:intron | 25.0% |
!!! | TCATGATAACCGATTTTAAA+GGG | - | chr3.2:84933251-84933270 | None:intergenic | 25.0% |
!!! | TGACAGTAACTCTTTAATTT+TGG | + | chr3.2:84931735-84931754 | MS.gene38557:intron | 25.0% |
!!! | TTCATGATAACCGATTTTAA+AGG | - | chr3.2:84933252-84933271 | None:intergenic | 25.0% |
!!! | TTTGCCTTTTGATGTTTTTT+CGG | + | chr3.2:84931793-84931812 | MS.gene38557:intron | 25.0% |
AAACAAAGAGATAACAAAGG+TGG | - | chr3.2:84933172-84933191 | None:intergenic | 30.0% | |
AAACACTGAAATTCCAAAAG+AGG | - | chr3.2:84931161-84931180 | None:intergenic | 30.0% | |
AAAGGAGAAATTGCAAAACT+GGG | - | chr3.2:84931412-84931431 | None:intergenic | 30.0% | |
AAATCAACATACCTCGATAA+AGG | - | chr3.2:84932604-84932623 | None:intergenic | 30.0% | |
AAATCATAAACACAGTGATG+AGG | - | chr3.2:84935562-84935581 | None:intergenic | 30.0% | |
AATAATGCAATACTCACAAC+AGG | - | chr3.2:84935218-84935237 | None:intergenic | 30.0% | |
AGAAAAATGCATTATCAACC+TGG | - | chr3.2:84932977-84932996 | None:intergenic | 30.0% | |
AGAAGAAGTAAGAGATTTAC+TGG | + | chr3.2:84932732-84932751 | MS.gene38557:CDS | 30.0% | |
ATCACTGTGTTTATGATTTG+AGG | + | chr3.2:84935563-84935582 | MS.gene38557:intron | 30.0% | |
ATCGGTTATCATGAAATGTT+TGG | + | chr3.2:84933257-84933276 | MS.gene38557:intron | 30.0% | |
ATGTTTGATTACACTCTTTG+AGG | - | chr3.2:84931696-84931715 | None:intergenic | 30.0% | |
ATTCAAATTGTGTCTCATCA+TGG | - | chr3.2:84933431-84933450 | None:intergenic | 30.0% | |
CTTCAATTGAAATCTGTCTA+CGG | + | chr3.2:84931948-84931967 | MS.gene38557:intron | 30.0% | |
GAAACCGAAAAAACATCAAA+AGG | - | chr3.2:84931800-84931819 | None:intergenic | 30.0% | |
GAACTTTGTGATGTAAATGA+TGG | - | chr3.2:84934216-84934235 | None:intergenic | 30.0% | |
GCTAAAATAGAGATGTTGTT+TGG | - | chr3.2:84935110-84935129 | None:intergenic | 30.0% | |
TAAAAAGCAACAACAGTTTG+AGG | - | chr3.2:84933572-84933591 | None:intergenic | 30.0% | |
TAAAGGAGAAATTGCAAAAC+TGG | - | chr3.2:84931413-84931432 | None:intergenic | 30.0% | |
TATTTCCTATAATAGCCTAC+TGG | + | chr3.2:84935487-84935506 | MS.gene38557:intron | 30.0% | |
TCAGGAGTTCATATTAACAA+AGG | + | chr3.2:84933906-84933925 | MS.gene38557:intron | 30.0% | |
TCGGTTATCATGAAATGTTT+GGG | + | chr3.2:84933258-84933277 | MS.gene38557:intron | 30.0% | |
TGTCACAACACTAAAAGAAA+TGG | + | chr3.2:84932888-84932907 | MS.gene38557:CDS | 30.0% | |
TTATATAGGGTCTTAAGGAA+AGG | + | chr3.2:84935767-84935786 | MS.gene38557:intron | 30.0% | |
TTCATATGTGCAAAGTTATC+TGG | + | chr3.2:84932665-84932684 | MS.gene38557:intron | 30.0% | |
TTGACAAAAAAAGCTCTGTT+TGG | - | chr3.2:84934790-84934809 | None:intergenic | 30.0% | |
! | AAATAGTCTGGCTTCAAAAT+AGG | - | chr3.2:84934240-84934259 | None:intergenic | 30.0% |
! | AAATCTGATTTTCAGACTCT+TGG | + | chr3.2:84933039-84933058 | MS.gene38557:intron | 30.0% |
! | ATTTTTACTTCATTGCAGAC+AGG | + | chr3.2:84932444-84932463 | MS.gene38557:intron | 30.0% |
! | CATATGGACTAATTTGTAGA+TGG | - | chr3.2:84934156-84934175 | None:intergenic | 30.0% |
! | CTTGAGGTATTATTCCTATT+TGG | - | chr3.2:84932515-84932534 | None:intergenic | 30.0% |
! | GACTAATTTGTAGATGGATT+CGG | - | chr3.2:84934150-84934169 | None:intergenic | 30.0% |
! | GCAGCTATCATTAGAATTTT+TGG | - | chr3.2:84933694-84933713 | None:intergenic | 30.0% |
! | GTTTCTCTTTTTGTACCTTA+AGG | + | chr3.2:84934478-84934497 | MS.gene38557:intron | 30.0% |
! | TAAACTTACTAGGCTTTTAC+AGG | + | chr3.2:84934013-84934032 | MS.gene38557:CDS | 30.0% |
! | TCAAAGAGTGTAATCAAACA+TGG | + | chr3.2:84931695-84931714 | MS.gene38557:intron | 30.0% |
! | TGCATACTTCAAAGTGTTTA+GGG | - | chr3.2:84935168-84935187 | None:intergenic | 30.0% |
! | TTATGATTTGAGGCATTCAA+TGG | + | chr3.2:84935573-84935592 | MS.gene38557:intron | 30.0% |
! | TTGAAGATAAAAGGCATACA+AGG | - | chr3.2:84931934-84931953 | None:intergenic | 30.0% |
! | TTGCATACTTCAAAGTGTTT+AGG | - | chr3.2:84935169-84935188 | None:intergenic | 30.0% |
!! | CTTCATTCTATTTCTGGATT+TGG | + | chr3.2:84931304-84931323 | MS.gene38557:intron | 30.0% |
!! | TTGACTTGTTGCTATAATTC+AGG | + | chr3.2:84932209-84932228 | MS.gene38557:intron | 30.0% |
!!! | AGAGCTAAAAGCTCTTTTTT+TGG | + | chr3.2:84934833-84934852 | MS.gene38557:intron | 30.0% |
!!! | GGGTTTTATCCCTTTAAAAT+CGG | + | chr3.2:84933239-84933258 | MS.gene38557:intron | 30.0% |
!!! | GTTGTTGCTTTTTATTCTAC+TGG | + | chr3.2:84933578-84933597 | MS.gene38557:intron | 30.0% |
!!! | TCTCATTTTTAGCATTTCAC+TGG | - | chr3.2:84935348-84935367 | None:intergenic | 30.0% |
!!! | TCTTTGTTTTAAAAGTCTGC+TGG | + | chr3.2:84933183-84933202 | MS.gene38557:intron | 30.0% |
!!! | TGATTTTGATTGATATAGGG+AGG | + | chr3.2:84931370-84931389 | MS.gene38557:intron | 30.0% |
AAATTGTTGCGTGAAAGTTG+CGG | + | chr3.2:84930965-84930984 | MS.gene38557:CDS | 35.0% | |
AAGAAGCAACATGAAAAGCT+TGG | - | chr3.2:84935061-84935080 | None:intergenic | 35.0% | |
AATGCATTATCAACCTGGAT+TGG | - | chr3.2:84932972-84932991 | None:intergenic | 35.0% | |
ACGAGCTTATAGCTTATTTC+AGG | - | chr3.2:84934741-84934760 | None:intergenic | 35.0% | |
AGCAAAACAGAAACTGCAAA+TGG | + | chr3.2:84932769-84932788 | MS.gene38557:CDS | 35.0% | |
AGGTGTTCATGTTCCATATA+GGG | + | chr3.2:84933986-84934005 | MS.gene38557:CDS | 35.0% | |
ATAGGGACAGTAAACTTACT+AGG | + | chr3.2:84934003-84934022 | MS.gene38557:CDS | 35.0% | |
CAAATATGAACAACCAATCC+AGG | + | chr3.2:84932956-84932975 | MS.gene38557:CDS | 35.0% | |
CAAATTCGTGAGACATCAAA+TGG | + | chr3.2:84932832-84932851 | MS.gene38557:CDS | 35.0% | |
CAACAAAATTGGGAGCTTAA+AGG | + | chr3.2:84932551-84932570 | MS.gene38557:CDS | 35.0% | |
CATTTCCAGCATCTAACAAT+GGG | + | chr3.2:84933206-84933225 | MS.gene38557:intron | 35.0% | |
CTCTAATGTTATGGTGAAGA+TGG | - | chr3.2:84933658-84933677 | None:intergenic | 35.0% | |
CTTTGCATCAACCATTTAGT+TGG | - | chr3.2:84935002-84935021 | None:intergenic | 35.0% | |
GAACAGTAGCATTATATCCT+TGG | - | chr3.2:84932344-84932363 | None:intergenic | 35.0% | |
GATGTCTCACGAATTTGTAT+TGG | - | chr3.2:84932829-84932848 | None:intergenic | 35.0% | |
GCTAAAAATGAGACAACAAC+TGG | + | chr3.2:84935355-84935374 | MS.gene38557:CDS | 35.0% | |
GCTATAATTCAGGTGCAAAT+TGG | + | chr3.2:84932219-84932238 | MS.gene38557:intron | 35.0% | |
GGTAATGTTATTAGTGCACT+TGG | + | chr3.2:84933942-84933961 | MS.gene38557:CDS | 35.0% | |
GTAAGTTTACTGTCCCTATA+TGG | - | chr3.2:84934002-84934021 | None:intergenic | 35.0% | |
GTTGAAGTTAAAGGCCATTT+AGG | - | chr3.2:84934874-84934893 | None:intergenic | 35.0% | |
TAACAATGGGATTGAGCTTT+GGG | + | chr3.2:84933219-84933238 | MS.gene38557:intron | 35.0% | |
TAACATTACCAAGTGCTAGA+AGG | - | chr3.2:84933932-84933951 | None:intergenic | 35.0% | |
TGATGAGATACCAATCAATC+CGG | + | chr3.2:84935540-84935559 | MS.gene38557:intron | 35.0% | |
TGTCGCAGAACAAAATGAAA+AGG | + | chr3.2:84935858-84935877 | MS.gene38557:CDS | 35.0% | |
TTGGAATTTCAGTGTTTACG+TGG | + | chr3.2:84931164-84931183 | MS.gene38557:intron | 35.0% | |
TTTACCAAACAGAGCCTAAA+TGG | + | chr3.2:84934857-84934876 | MS.gene38557:intron | 35.0% | |
TTTAGCATTTCACTGGACAT+GGG | - | chr3.2:84935341-84935360 | None:intergenic | 35.0% | |
! | AAAATACTTTTCCCACTACG+TGG | - | chr3.2:84933513-84933532 | None:intergenic | 35.0% |
! | AAATACTTTTCCCACTACGT+GGG | - | chr3.2:84933512-84933531 | None:intergenic | 35.0% |
! | AAGGTGTTCATGTTCCATAT+AGG | + | chr3.2:84933985-84934004 | MS.gene38557:CDS | 35.0% |
! | AGTTTCTGTTTTGCTCATTG+AGG | - | chr3.2:84932764-84932783 | None:intergenic | 35.0% |
! | ATGATTTTGCAGGATTCACT+TGG | + | chr3.2:84934422-84934441 | MS.gene38557:intron | 35.0% |
! | CAACTAAATGGTTGATGCAA+AGG | + | chr3.2:84935000-84935019 | MS.gene38557:intron | 35.0% |
! | CTTTCTCCAATCATGTTTTG+TGG | - | chr3.2:84933085-84933104 | None:intergenic | 35.0% |
! | GAAAAGAGTTACAAGTGTTG+TGG | - | chr3.2:84932416-84932435 | None:intergenic | 35.0% |
! | GATAAGCTAGTTGAAGTGTT+TGG | + | chr3.2:84934593-84934612 | MS.gene38557:intron | 35.0% |
! | GCAAAAGCACAATTAATGCT+AGG | - | chr3.2:84935670-84935689 | None:intergenic | 35.0% |
! | TACTCACAACAGGCTTATTT+TGG | - | chr3.2:84935208-84935227 | None:intergenic | 35.0% |
! | TGATTTTGCAGGATTCACTT+GGG | + | chr3.2:84934423-84934442 | MS.gene38557:intron | 35.0% |
! | TTTGATTACACTCTTTGAGG+AGG | - | chr3.2:84931693-84931712 | None:intergenic | 35.0% |
! | TTTTACCAAACAGAGCCTTA+AGG | - | chr3.2:84934496-84934515 | None:intergenic | 35.0% |
! | TTTTAGCATTTCACTGGACA+TGG | - | chr3.2:84935342-84935361 | None:intergenic | 35.0% |
AAAACATACACCATGGGAAC+TGG | + | chr3.2:84932474-84932493 | MS.gene38557:CDS | 40.0% | |
AAACATACACCATGGGAACT+GGG | + | chr3.2:84932475-84932494 | MS.gene38557:CDS | 40.0% | |
AACAGCAGAACTGTCATGAT+AGG | + | chr3.2:84934449-84934468 | MS.gene38557:CDS | 40.0% | |
AATATCAGCAGGACTTATGC+AGG | - | chr3.2:84935132-84935151 | None:intergenic | 40.0% | |
AATGCTACTGTTCTCGCATA+TGG | + | chr3.2:84932351-84932370 | MS.gene38557:CDS | 40.0% | |
ACACAGTGATGAGGATTGAT+TGG | - | chr3.2:84935553-84935572 | None:intergenic | 40.0% | |
ACATTCAGCTGCAAATAGTC+TGG | - | chr3.2:84934252-84934271 | None:intergenic | 40.0% | |
ATGGGAACTGGGTTTAAAGA+AGG | + | chr3.2:84932486-84932505 | MS.gene38557:CDS | 40.0% | |
CAGAACGAGCTAAAAGAACA+GGG | + | chr3.2:84933778-84933797 | MS.gene38557:CDS | 40.0% | |
CATGCAACTGAAATTCACTC+TGG | - | chr3.2:84932578-84932597 | None:intergenic | 40.0% | |
CTAACAATGGGATTGAGCTT+TGG | + | chr3.2:84933218-84933237 | MS.gene38557:intron | 40.0% | |
CTGCATTTAGTAGATCTTGC+CGG | + | chr3.2:84933753-84933772 | MS.gene38557:CDS | 40.0% | |
GAGTGTAATCAAACATGGTC+AGG | + | chr3.2:84931700-84931719 | MS.gene38557:intron | 40.0% | |
GATGAAAAGAAGCGAAAGGA+AGG | + | chr3.2:84933966-84933985 | MS.gene38557:CDS | 40.0% | |
GCATTTCCAGCATCTAACAA+TGG | + | chr3.2:84933205-84933224 | MS.gene38557:intron | 40.0% | |
GCGCATTTGCTCTAATGTTA+TGG | - | chr3.2:84933667-84933686 | None:intergenic | 40.0% | |
GTAACACGAAAAGCTCTGTT+TGG | - | chr3.2:84934768-84934787 | None:intergenic | 40.0% | |
GTCTCACGAATTTGTATTGG+CGG | - | chr3.2:84932826-84932845 | None:intergenic | 40.0% | |
GTTGCATGTTTCCTTTATCG+AGG | + | chr3.2:84932590-84932609 | MS.gene38557:CDS | 40.0% | |
TACGGTGTTCATGAAGTTCA+CGG | - | chr3.2:84935828-84935847 | None:intergenic | 40.0% | |
TACGTGGAAGAGATCTAGAT+CGG | + | chr3.2:84931180-84931199 | MS.gene38557:intron | 40.0% | |
TCAATCCCATTGTTAGATGC+TGG | - | chr3.2:84933214-84933233 | None:intergenic | 40.0% | |
TCAGAACGAGCTAAAAGAAC+AGG | + | chr3.2:84933777-84933796 | MS.gene38557:CDS | 40.0% | |
TCCTCAGCATTAATATCAGC+AGG | - | chr3.2:84935143-84935162 | None:intergenic | 40.0% | |
TCCTGCTGATATTAATGCTG+AGG | + | chr3.2:84935139-84935158 | MS.gene38557:CDS | 40.0% | |
TCTGAGGAAGTTCAGGTATT+TGG | + | chr3.2:84935419-84935438 | MS.gene38557:intron | 40.0% | |
TCTGGGAAAACATACACCAT+GGG | + | chr3.2:84932468-84932487 | MS.gene38557:CDS | 40.0% | |
TCTTCAAACATGTCACTCGA+GGG | - | chr3.2:84932291-84932310 | None:intergenic | 40.0% | |
TGAAAGTTGCGGTTCATGTA+CGG | + | chr3.2:84930976-84930995 | MS.gene38557:CDS | 40.0% | |
TGGAACAAACCATCAACAAG+TGG | - | chr3.2:84932324-84932343 | None:intergenic | 40.0% | |
TTATCCACCTACTTACTTGC+TGG | + | chr3.2:84933398-84933417 | MS.gene38557:intron | 40.0% | |
TTCCTATAATAGCCTACTGG+TGG | + | chr3.2:84935490-84935509 | MS.gene38557:intron | 40.0% | |
TTCTTCAAACATGTCACTCG+AGG | - | chr3.2:84932292-84932311 | None:intergenic | 40.0% | |
TTCTTTAAACCCAGTTCCCA+TGG | - | chr3.2:84932487-84932506 | None:intergenic | 40.0% | |
TTGTACCTTAAGGCTCTGTT+TGG | + | chr3.2:84934488-84934507 | MS.gene38557:intron | 40.0% | |
! | AATACTTTTCCCACTACGTG+GGG | - | chr3.2:84933511-84933530 | None:intergenic | 40.0% |
! | ATTCTCCTCGGCATCAATTT+TGG | + | chr3.2:84932174-84932193 | MS.gene38557:intron | 40.0% |
! | ATTTTGCAGGATTCACTTGG+GGG | + | chr3.2:84934425-84934444 | MS.gene38557:intron | 40.0% |
! | CTAAAAGTGTGAACCCACTT+GGG | + | chr3.2:84932091-84932110 | MS.gene38557:intron | 40.0% |
! | GATCATGTTTATGGAAGCAC+TGG | + | chr3.2:84932261-84932280 | MS.gene38557:CDS | 40.0% |
! | GATTTTGCAGGATTCACTTG+GGG | + | chr3.2:84934424-84934443 | MS.gene38557:intron | 40.0% |
! | GTCTGATGGTATGCGTTTTA+AGG | + | chr3.2:84933800-84933819 | MS.gene38557:CDS | 40.0% |
! | TAGATGGATTCGGAGAAACA+GGG | - | chr3.2:84934140-84934159 | None:intergenic | 40.0% |
! | TCTGTTTTGCTCATTGAGGA+GGG | - | chr3.2:84932760-84932779 | None:intergenic | 40.0% |
! | TGGTGATGAAAAGAAGCGAA+AGG | + | chr3.2:84933962-84933981 | MS.gene38557:CDS | 40.0% |
! | TGTGTTTCTCCACTTGTTGA+TGG | + | chr3.2:84932312-84932331 | MS.gene38557:CDS | 40.0% |
! | TTCTGGGAAAACATACACCA+TGG | + | chr3.2:84932467-84932486 | MS.gene38557:CDS | 40.0% |
! | TTCTGTTTTGCTCATTGAGG+AGG | - | chr3.2:84932761-84932780 | None:intergenic | 40.0% |
!! | AATGGTGTTATAACCCTTGC+AGG | + | chr3.2:84932850-84932869 | MS.gene38557:CDS | 40.0% |
!! | ATGGTGTTATAACCCTTGCA+GGG | + | chr3.2:84932851-84932870 | MS.gene38557:CDS | 40.0% |
!! | CTTGTTGATGGTTTGTTCCA+AGG | + | chr3.2:84932324-84932343 | MS.gene38557:CDS | 40.0% |
!!! | GATGGTATGCGTTTTAAGGA+AGG | + | chr3.2:84933804-84933823 | MS.gene38557:CDS | 40.0% |
!!! | TCTTTTAGCTCGTTCTGATC+CGG | - | chr3.2:84933775-84933794 | None:intergenic | 40.0% |
AACAAAGGCCTTCTAGCACT+TGG | + | chr3.2:84933921-84933940 | MS.gene38557:CDS | 45.0% | |
AACCTCCAAAATTGATGCCG+AGG | - | chr3.2:84932182-84932201 | None:intergenic | 45.0% | |
AAGGCCATTTAGGCTCTGTT+TGG | - | chr3.2:84934864-84934883 | None:intergenic | 45.0% | |
ACACAGTGATCCGGATTGAT+TGG | - | chr3.2:84935626-84935645 | None:intergenic | 45.0% | |
ACTTCATTGCAGACAGGTTC+TGG | + | chr3.2:84932450-84932469 | MS.gene38557:intron | 45.0% | |
ATCAAACCTGAGACCTTGAG+AGG | - | chr3.2:84932156-84932175 | None:intergenic | 45.0% | |
ATTCGGAGAAACAGGGGATA+TGG | - | chr3.2:84934133-84934152 | None:intergenic | 45.0% | |
CTTCATTGCAGACAGGTTCT+GGG | + | chr3.2:84932451-84932470 | MS.gene38557:intron | 45.0% | |
GAAACTGCAAATGGACATGC+AGG | + | chr3.2:84932778-84932797 | MS.gene38557:CDS | 45.0% | |
GATCCTCAAGTAGAGCAACT+GGG | + | chr3.2:84932929-84932948 | MS.gene38557:CDS | 45.0% | |
GCATGGCCACAAAACATGAT+TGG | + | chr3.2:84933076-84933095 | MS.gene38557:intron | 45.0% | |
GCTAAAAGAACAGGGTCTGA+TGG | + | chr3.2:84933786-84933805 | MS.gene38557:CDS | 45.0% | |
GTCTCAGGTTTGATTCTCCT+CGG | + | chr3.2:84932162-84932181 | MS.gene38557:intron | 45.0% | |
GTTCATGAAGTTCACGGCAA+AGG | - | chr3.2:84935822-84935841 | None:intergenic | 45.0% | |
TACTGTTCTCGCATATGGTC+AGG | + | chr3.2:84932356-84932375 | MS.gene38557:CDS | 45.0% | |
TCATGTACGGCCATTAATCG+CGG | + | chr3.2:84930989-84931008 | MS.gene38557:CDS | 45.0% | |
TGCCACCAGTAGGCTATTAT+AGG | - | chr3.2:84935495-84935514 | None:intergenic | 45.0% | |
TGGTGAAGATGGCATGAGAT+CGG | - | chr3.2:84933647-84933666 | None:intergenic | 45.0% | |
! | ACAACAACTGGAGTGTTTGC+AGG | + | chr3.2:84935367-84935386 | MS.gene38557:CDS | 45.0% |
! | ACCTACTTACTTGCTGGTCT+CGG | + | chr3.2:84933404-84933423 | MS.gene38557:intron | 45.0% |
! | AGATGGATTCGGAGAAACAG+GGG | - | chr3.2:84934139-84934158 | None:intergenic | 45.0% |
! | GCTAAAAGTGTGAACCCACT+TGG | + | chr3.2:84932090-84932109 | MS.gene38557:intron | 45.0% |
! | GTAGATGGATTCGGAGAAAC+AGG | - | chr3.2:84934141-84934160 | None:intergenic | 45.0% |
! | TGGTCTAGTGGTGTTAGCTT+GGG | + | chr3.2:84932115-84932134 | MS.gene38557:intron | 45.0% |
! | TTGGTCTAGTGGTGTTAGCT+TGG | + | chr3.2:84932114-84932133 | MS.gene38557:intron | 45.0% |
!! | GTTGATAGTGTATGCACCTG+AGG | - | chr3.2:84931065-84931084 | None:intergenic | 45.0% |
AACTTCCTCAGATGAGCCAC+CGG | - | chr3.2:84935411-84935430 | None:intergenic | 50.0% | |
AAGTGTGAACCCACTTGGGT+TGG | + | chr3.2:84932095-84932114 | MS.gene38557:intron | 50.0% | |
ACCACTAGACCAACCCAAGT+GGG | - | chr3.2:84932107-84932126 | None:intergenic | 50.0% | |
ACCGAGACCAGCAAGTAAGT+AGG | - | chr3.2:84933408-84933427 | None:intergenic | 50.0% | |
AGCCATTGAATGCCACCAGT+AGG | - | chr3.2:84935505-84935524 | None:intergenic | 50.0% | |
AGCCTACTGGTGGCATTCAA+TGG | + | chr3.2:84935500-84935519 | MS.gene38557:intron | 50.0% | |
AGCTTCTCGTCCGCGATTAA+TGG | - | chr3.2:84931002-84931021 | None:intergenic | 50.0% | |
ATGGCATGAGATCGGCTAGT+TGG | - | chr3.2:84933639-84933658 | None:intergenic | 50.0% | |
ATTGTGTAGCCGTCGTTGCT+GGG | + | chr3.2:84931036-84931055 | MS.gene38557:CDS | 50.0% | |
CAGGAAAAACGTCCTCTCCT+GGG | + | chr3.2:84932797-84932816 | MS.gene38557:CDS | 50.0% | |
CTGTTAAGACCCCACGTAGT+GGG | + | chr3.2:84933499-84933518 | MS.gene38557:intron | 50.0% | |
CTTGGAATGTGCTCCTCTCA+AGG | + | chr3.2:84932140-84932159 | MS.gene38557:intron | 50.0% | |
GACTTCTGTAGACCCTGCAA+GGG | - | chr3.2:84932866-84932885 | None:intergenic | 50.0% | |
GAGACCAGCAAGTAAGTAGG+TGG | - | chr3.2:84933405-84933424 | None:intergenic | 50.0% | |
GGATCCTCAAGTAGAGCAAC+TGG | + | chr3.2:84932928-84932947 | MS.gene38557:CDS | 50.0% | |
TACTTGAGGATCCCTGTTCG+AGG | - | chr3.2:84932921-84932940 | None:intergenic | 50.0% | |
TGACTTCTGTAGACCCTGCA+AGG | - | chr3.2:84932867-84932886 | None:intergenic | 50.0% | |
TGGCTCATCTGAGGAAGTTC+AGG | + | chr3.2:84935412-84935431 | MS.gene38557:CDS | 50.0% | |
! | ATTTGTATTGGCGGCTTCCC+AGG | - | chr3.2:84932817-84932836 | None:intergenic | 50.0% |
! | CTCCTCGGCATCAATTTTGG+AGG | + | chr3.2:84932177-84932196 | MS.gene38557:intron | 50.0% |
! | CTGCGACAGAGCATCTACTA+CGG | - | chr3.2:84935846-84935865 | None:intergenic | 50.0% |
! | GTGGTGTTAGCTTGGGATCT+TGG | + | chr3.2:84932122-84932141 | MS.gene38557:intron | 50.0% |
! | TCAGACTCTTGGACCGCTTT+TGG | + | chr3.2:84933050-84933069 | MS.gene38557:intron | 50.0% |
!! | CAGACTCTTGGACCGCTTTT+GGG | + | chr3.2:84933051-84933070 | MS.gene38557:intron | 50.0% |
AATGGCTGCTTGCCTCGAAC+AGG | + | chr3.2:84932906-84932925 | MS.gene38557:CDS | 55.0% | |
ATCGCGGACGAGAAGCTTCA+AGG | + | chr3.2:84931005-84931024 | MS.gene38557:CDS | 55.0% | |
ATGGCTGCTTGCCTCGAACA+GGG | + | chr3.2:84932907-84932926 | MS.gene38557:CDS | 55.0% | |
CACCACTAGACCAACCCAAG+TGG | - | chr3.2:84932108-84932127 | None:intergenic | 55.0% | |
GATTGTGTAGCCGTCGTTGC+TGG | + | chr3.2:84931035-84931054 | MS.gene38557:CDS | 55.0% | |
GCAGGAAAAACGTCCTCTCC+TGG | + | chr3.2:84932796-84932815 | MS.gene38557:CDS | 55.0% | |
GCTCCCAGTTGCTCTACTTG+AGG | - | chr3.2:84932935-84932954 | None:intergenic | 55.0% | |
GCTGTTAAGACCCCACGTAG+TGG | + | chr3.2:84933498-84933517 | MS.gene38557:intron | 55.0% | |
GTGGCCATGCTACCCAAAAG+CGG | - | chr3.2:84933066-84933085 | None:intergenic | 55.0% | |
TGTGCTCCTCTCAAGGTCTC+AGG | + | chr3.2:84932147-84932166 | MS.gene38557:intron | 55.0% | |
!! | ACCCACTTGGGTTGGTCTAG+TGG | + | chr3.2:84932103-84932122 | MS.gene38557:intron | 55.0% |
!! | TGGACCGCTTTTGGGTAGCA+TGG | + | chr3.2:84933059-84933078 | MS.gene38557:intron | 55.0% |
CTGAGGCTTCCCAGCAACGA+CGG | - | chr3.2:84931048-84931067 | None:intergenic | 60.0% | |
TATTGGCGGCTTCCCAGGAG+AGG | - | chr3.2:84932812-84932831 | None:intergenic | 60.0% | |
! | GCAGAGCTTTGTGCTCGTGC+CGG | + | chr3.2:84935389-84935408 | MS.gene38557:CDS | 60.0% |
CGTCGTTGCTGGGAAGCCTC+AGG | + | chr3.2:84931046-84931065 | MS.gene38557:CDS | 65.0% | |
! | GAGCTTTGTGCTCGTGCCGG+TGG | + | chr3.2:84935392-84935411 | MS.gene38557:CDS | 65.0% |
! | TCGTGCCGGTGGCTCATCTG+AGG | + | chr3.2:84935403-84935422 | MS.gene38557:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 84930951 | 84935888 | 84930951 | ID=MS.gene38557 |
chr3.2 | mRNA | 84930951 | 84935888 | 84930951 | ID=MS.gene38557.t1;Parent=MS.gene38557 |
chr3.2 | exon | 84930951 | 84931067 | 84930951 | ID=MS.gene38557.t1.exon1;Parent=MS.gene38557.t1 |
chr3.2 | CDS | 84930951 | 84931067 | 84930951 | ID=cds.MS.gene38557.t1;Parent=MS.gene38557.t1 |
chr3.2 | exon | 84932231 | 84932377 | 84932231 | ID=MS.gene38557.t1.exon2;Parent=MS.gene38557.t1 |
chr3.2 | CDS | 84932231 | 84932377 | 84932231 | ID=cds.MS.gene38557.t1;Parent=MS.gene38557.t1 |
chr3.2 | exon | 84932462 | 84932611 | 84932462 | ID=MS.gene38557.t1.exon3;Parent=MS.gene38557.t1 |
chr3.2 | CDS | 84932462 | 84932611 | 84932462 | ID=cds.MS.gene38557.t1;Parent=MS.gene38557.t1 |
chr3.2 | exon | 84932724 | 84932977 | 84932724 | ID=MS.gene38557.t1.exon4;Parent=MS.gene38557.t1 |
chr3.2 | CDS | 84932724 | 84932977 | 84932724 | ID=cds.MS.gene38557.t1;Parent=MS.gene38557.t1 |
chr3.2 | exon | 84933644 | 84933825 | 84933644 | ID=MS.gene38557.t1.exon5;Parent=MS.gene38557.t1 |
chr3.2 | CDS | 84933644 | 84933825 | 84933644 | ID=cds.MS.gene38557.t1;Parent=MS.gene38557.t1 |
chr3.2 | exon | 84933910 | 84934034 | 84933910 | ID=MS.gene38557.t1.exon6;Parent=MS.gene38557.t1 |
chr3.2 | CDS | 84933910 | 84934034 | 84933910 | ID=cds.MS.gene38557.t1;Parent=MS.gene38557.t1 |
chr3.2 | exon | 84934434 | 84934470 | 84934434 | ID=MS.gene38557.t1.exon7;Parent=MS.gene38557.t1 |
chr3.2 | CDS | 84934434 | 84934470 | 84934434 | ID=cds.MS.gene38557.t1;Parent=MS.gene38557.t1 |
chr3.2 | exon | 84935129 | 84935220 | 84935129 | ID=MS.gene38557.t1.exon8;Parent=MS.gene38557.t1 |
chr3.2 | CDS | 84935129 | 84935220 | 84935129 | ID=cds.MS.gene38557.t1;Parent=MS.gene38557.t1 |
chr3.2 | exon | 84935326 | 84935433 | 84935326 | ID=MS.gene38557.t1.exon9;Parent=MS.gene38557.t1 |
chr3.2 | CDS | 84935326 | 84935433 | 84935326 | ID=cds.MS.gene38557.t1;Parent=MS.gene38557.t1 |
chr3.2 | exon | 84935775 | 84935888 | 84935775 | ID=MS.gene38557.t1.exon10;Parent=MS.gene38557.t1 |
chr3.2 | CDS | 84935775 | 84935888 | 84935775 | ID=cds.MS.gene38557.t1;Parent=MS.gene38557.t1 |
Gene Sequence |
Protein sequence |