Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38639.t1 | BBH05442.1 | 82.1 | 486 | 80 | 2 | 1 | 479 | 1 | 486 | 6.50E-213 | 750.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38639.t1 | P10978 | 33.9 | 504 | 302 | 12 | 7 | 487 | 5 | 500 | 1.4e-70 | 268.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38639.t1 | A0A4Y1RM46 | 82.1 | 486 | 80 | 2 | 1 | 479 | 1 | 486 | 4.7e-213 | 750.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05615 | MS.gene38639 | 0.83046 | 2.90E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38639.t1 | MTR_2g039140 | 40.217 | 184 | 77 | 2 | 1 | 183 | 120 | 271 | 6.24e-31 | 122 |
| MS.gene38639.t1 | MTR_4g036430 | 89.744 | 39 | 4 | 0 | 1 | 39 | 31 | 69 | 5.99e-19 | 81.6 |
| MS.gene38639.t1 | MTR_1g027280 | 32.667 | 150 | 95 | 2 | 275 | 418 | 103 | 252 | 7.04e-17 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38639.t1 | AT3G29785 | 56.667 | 90 | 38 | 1 | 11 | 100 | 7 | 95 | 4.72e-29 | 111 |
Find 134 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATACCAACTGAACTTAAT+TGG | 0.091541 | 6.2:+56317866 | None:intergenic |
| AATTCTTGAACAATTCTTTC+TGG | 0.139133 | 6.2:+56317356 | None:intergenic |
| AGCTCAAGTTTCTCCTTCTT+TGG | 0.178545 | 6.2:+56316857 | None:intergenic |
| CTGAGAACTACGATGATTTC+TGG | 0.189947 | 6.2:+56317582 | None:intergenic |
| GCTCAAGTTTCTCCTTCTTT+GGG | 0.216862 | 6.2:+56316858 | None:intergenic |
| AGCTTGTTCACTCTGATGTT+TGG | 0.239489 | 6.2:-56316838 | MS.gene38639:CDS |
| TTAGGCCATATGAGTGAAAA+AGG | 0.246871 | 6.2:-56317001 | MS.gene38639:CDS |
| TCATCATCCTTCATCGATTC+TGG | 0.247368 | 6.2:+56318126 | None:intergenic |
| TTCGCCTCTTGATTCTTTGC+TGG | 0.253882 | 6.2:+56317493 | None:intergenic |
| GCTTGTTCACTCTGATGTTT+GGG | 0.262246 | 6.2:-56316837 | MS.gene38639:CDS |
| ACCTTTGTTAACATATTTGC+AGG | 0.298625 | 6.2:+56314483 | None:intergenic |
| CTCTCATCTGTGGTACTTCC+TGG | 0.302943 | 6.2:+56316130 | None:intergenic |
| ACTACGATGATTTCTGGATT+TGG | 0.314338 | 6.2:+56317588 | None:intergenic |
| TGACGCGTTGATATGTTCTT+TGG | 0.328692 | 6.2:-56317434 | MS.gene38639:CDS |
| AATACCAACTGAACTTAATT+GGG | 0.364604 | 6.2:+56317867 | None:intergenic |
| TCGCCTCTTGATTCTTTGCT+GGG | 0.374564 | 6.2:+56317494 | None:intergenic |
| CTAGAAGACCTTCTTAGTTC+GGG | 0.376766 | 6.2:+56316034 | None:intergenic |
| ATGGTGCGGACTTTGGCTTT+TGG | 0.377376 | 6.2:-56318212 | MS.gene38639:CDS |
| TCTAGAAGACCTTCTTAGTT+CGG | 0.380530 | 6.2:+56316033 | None:intergenic |
| ATTCTGCCAATTCCTCTGAC+TGG | 0.381706 | 6.2:+56316104 | None:intergenic |
| CAAATGAAAATCCTAATCTA+TGG | 0.386419 | 6.2:-56317033 | MS.gene38639:CDS |
| AATCTCTTGTGCCATAGATT+AGG | 0.388549 | 6.2:+56317022 | None:intergenic |
| ATTTCTGGATTTGGATCGTC+TGG | 0.389287 | 6.2:+56317597 | None:intergenic |
| GAGTCCCCAGTCAGAGGAAT+TGG | 0.391428 | 6.2:-56316110 | MS.gene38639:CDS |
| CATGCTTCATCATAATCTTC+AGG | 0.392057 | 6.2:+56315953 | None:intergenic |
| TAGTTTATGTATCTACTGTT+TGG | 0.396515 | 6.2:+56316001 | None:intergenic |
| GACCTTCTTAGTTCGGGAAC+AGG | 0.398484 | 6.2:+56316040 | None:intergenic |
| ATTCTTGAACAATTCTTTCT+GGG | 0.401861 | 6.2:+56317357 | None:intergenic |
| TTCTGCCAATTCCTCTGACT+GGG | 0.401980 | 6.2:+56316105 | None:intergenic |
| TGTCTTCCCTACCAGATAGT+TGG | 0.404400 | 6.2:-56317810 | MS.gene38639:CDS |
| ACAGTAGCGCTCCAACTATC+TGG | 0.408688 | 6.2:+56317799 | None:intergenic |
| AGAAATTCAACCAGAGGAAA+TGG | 0.417568 | 6.2:-56317637 | MS.gene38639:CDS |
| GTAGAAATGGAAGATGTTCC+AGG | 0.421597 | 6.2:-56316148 | MS.gene38639:intron |
| TTAAGTTGAATGGGTCTGTA+TGG | 0.429127 | 6.2:-56317255 | MS.gene38639:CDS |
| ATTTGATGATGTTCGTGATC+TGG | 0.433721 | 6.2:-56317737 | MS.gene38639:CDS |
| TGTAGCCTTCGTCAGCCAAC+TGG | 0.442150 | 6.2:+56317176 | None:intergenic |
| GCAAATGTTGCTTCCACCTC+AGG | 0.445655 | 6.2:-56317463 | MS.gene38639:CDS |
| GAAGTTAAGATTAAGTTGAA+TGG | 0.447006 | 6.2:-56317265 | MS.gene38639:CDS |
| GGAGAGCAAGGAAGAGTCTT+GGG | 0.448480 | 6.2:-56317413 | MS.gene38639:CDS |
| AAGTTCGATGGTGCGGACTT+TGG | 0.452497 | 6.2:-56318219 | MS.gene38639:CDS |
| GAGATCCGACGAAGAGAGTT+GGG | 0.454617 | 6.2:-56317703 | MS.gene38639:CDS |
| CAGTCTTCCACGGTAATGAT+TGG | 0.466001 | 6.2:-56317150 | MS.gene38639:CDS |
| AATCTATGGCACAAGAGATT+AGG | 0.468903 | 6.2:-56317019 | MS.gene38639:CDS |
| TGAACAATCATGTAAGGTTG+TGG | 0.472879 | 6.2:-56317296 | MS.gene38639:CDS |
| TGAACTTTATTTGATGCTGA+AGG | 0.474628 | 6.2:+56317973 | None:intergenic |
| AAGTTAAGATTAAGTTGAAT+GGG | 0.477594 | 6.2:-56317264 | MS.gene38639:CDS |
| TAAACTTTACCAAGGTTACC+AGG | 0.478940 | 6.2:+56317328 | None:intergenic |
| CTCAAGTTTCTCCTTCTTTG+GGG | 0.479045 | 6.2:+56316859 | None:intergenic |
| AAGGAAAACTACCAAGTCTT+CGG | 0.487272 | 6.2:-56316958 | MS.gene38639:CDS |
| TTTACCACGTCCATTTCCTC+TGG | 0.487326 | 6.2:+56317627 | None:intergenic |
| AACCTTGGTAAAGTTTACCT+TGG | 0.487612 | 6.2:-56317322 | MS.gene38639:CDS |
| TGGAAATGAACAATCATGTA+AGG | 0.490322 | 6.2:-56317302 | MS.gene38639:CDS |
| TTGTTGCAACTGCAATCAAA+TGG | 0.491822 | 6.2:+56317053 | None:intergenic |
| TACATGATTGTTCATTTCCA+AGG | 0.496095 | 6.2:+56317305 | None:intergenic |
| AATGATTGGAAGATTTCAAA+AGG | 0.497848 | 6.2:-56317136 | MS.gene38639:CDS |
| GAACAATCATGTAAGGTTGT+GGG | 0.499830 | 6.2:-56317295 | MS.gene38639:CDS |
| ATGAAGGTTATGCACTCAAA+AGG | 0.501665 | 6.2:-56316977 | MS.gene38639:CDS |
| TGGAGAGCAAGGAAGAGTCT+TGG | 0.501744 | 6.2:-56317414 | MS.gene38639:CDS |
| ATATGTGAAGACTGTATACT+TGG | 0.507653 | 6.2:-56316920 | MS.gene38639:CDS |
| CTTAATCTCCGTCGGCCAGT+TGG | 0.510968 | 6.2:-56317191 | MS.gene38639:CDS |
| TCTATCGAGTGTTGGAATTG+TGG | 0.512167 | 6.2:-56317550 | MS.gene38639:CDS |
| AACTACATGTTGTTAACTGA+TGG | 0.513907 | 6.2:-56315983 | MS.gene38639:CDS |
| TGCAAATATGTTAACAAAGG+TGG | 0.515611 | 6.2:-56314481 | MS.gene38639:CDS |
| CGCGTCACCTCCTCCTGAGG+TGG | 0.515832 | 6.2:+56317450 | None:intergenic |
| CTTAGTTCGGGAACAGGAGT+AGG | 0.518347 | 6.2:+56316046 | None:intergenic |
| GAGTCTTGGGTGTTAGACTC+TGG | 0.518950 | 6.2:-56317400 | MS.gene38639:CDS |
| AATTATGTCCCTGGTAACCT+TGG | 0.520579 | 6.2:-56317337 | MS.gene38639:CDS |
| AGAGTCAGCTTTCAGACAAG+TGG | 0.526062 | 6.2:-56316887 | MS.gene38639:CDS |
| CACAGCTGTGAGTAGCTCCT+CGG | 0.527844 | 6.2:-56317776 | MS.gene38639:CDS |
| ATTTCTATTGACCGAAGACT+TGG | 0.531290 | 6.2:+56316947 | None:intergenic |
| ACAGCTGTGAGTAGCTCCTC+GGG | 0.532462 | 6.2:-56317775 | MS.gene38639:CDS |
| AGAGATCCGACGAAGAGAGT+TGG | 0.533075 | 6.2:-56317704 | MS.gene38639:CDS |
| TAGCGCTCCAACTATCTGGT+AGG | 0.539026 | 6.2:+56317803 | None:intergenic |
| AAAGAAACCAGAATCGATGA+AGG | 0.539324 | 6.2:-56318133 | MS.gene38639:CDS |
| AAGTTGTGCTCAACTTCAGT+TGG | 0.539542 | 6.2:-56314441 | MS.gene38639:CDS |
| TGTTGGAATTGTGGAAAGAC+GGG | 0.540082 | 6.2:-56317541 | MS.gene38639:CDS |
| AAGTGGAAGAACCCCAAAGA+AGG | 0.540500 | 6.2:-56316870 | MS.gene38639:CDS |
| CTCCTGTTCCCGAACTAAGA+AGG | 0.541596 | 6.2:-56316042 | MS.gene38639:CDS |
| TCATGTAAGGTTGTGGGCAA+AGG | 0.547375 | 6.2:-56317289 | MS.gene38639:CDS |
| GGTACTCTTTACAAGACAGC+TGG | 0.550162 | 6.2:-56317082 | MS.gene38639:CDS |
| CAAATAAAGTTCATTTGATG+AGG | 0.550433 | 6.2:-56317963 | MS.gene38639:CDS |
| CAAGTGCTTGTCTGTCGAGA+AGG | 0.553812 | 6.2:+56318097 | None:intergenic |
| AACCACCGCTGGTCTTATGA+AGG | 0.557775 | 6.2:-56318019 | MS.gene38639:CDS |
| TAAGTTGAATGGGTCTGTAT+GGG | 0.558149 | 6.2:-56317254 | MS.gene38639:CDS |
| ACTCGAAATCTATCGAGTGT+TGG | 0.561027 | 6.2:-56317558 | MS.gene38639:CDS |
| GTGAAAATTGAAAAGTTCGA+TGG | 0.563926 | 6.2:-56318231 | MS.gene38639:CDS |
| GTGTTGGAATTGTGGAAAGA+CGG | 0.567490 | 6.2:-56317542 | MS.gene38639:CDS |
| CTCTGTATGCAATACTGAAG+AGG | 0.567853 | 6.2:+56317669 | None:intergenic |
| ACAACCCAATTAAGTTCAGT+TGG | 0.568124 | 6.2:-56317871 | MS.gene38639:CDS |
| GTTGCTTCCACCTCAGGAGG+AGG | 0.568689 | 6.2:-56317457 | MS.gene38639:CDS |
| TTTACACTTCGGATGACAGA+AGG | 0.576141 | 6.2:-56317934 | MS.gene38639:CDS |
| TCTGCCAATTCCTCTGACTG+GGG | 0.579510 | 6.2:+56316106 | None:intergenic |
| AGATGAGAGTCCCCAGTCAG+AGG | 0.580318 | 6.2:-56316116 | MS.gene38639:CDS |
| TTGTTCAAGAATTATGTCCC+TGG | 0.586171 | 6.2:-56317346 | MS.gene38639:CDS |
| CTCCCACTTACTAGCATCCG+TGG | 0.588137 | 6.2:+56315925 | None:intergenic |
| TTCGTCAGCCAACTGGCCGA+CGG | 0.590832 | 6.2:+56317183 | None:intergenic |
| GATGACAGAAGGCGCATCAG+TGG | 0.593273 | 6.2:-56317923 | MS.gene38639:CDS |
| AGCGCTCCAACTATCTGGTA+GGG | 0.594325 | 6.2:+56317804 | None:intergenic |
| GGAACAGGAGTAGGATGCAC+CGG | 0.594422 | 6.2:+56316055 | None:intergenic |
| AAATGGACGTGGTAAATCAA+AGG | 0.596335 | 6.2:-56317620 | MS.gene38639:CDS |
| CTTCTCGACAGACAAGCACT+TGG | 0.596707 | 6.2:-56318096 | MS.gene38639:CDS |
| TGAGGCGGTTGTTTACACTT+CGG | 0.598027 | 6.2:-56317945 | MS.gene38639:CDS |
| GATATGTTCTTTGGAGAGCA+AGG | 0.598084 | 6.2:-56317425 | MS.gene38639:CDS |
| ATAAAGTTCATTTGATGAGG+CGG | 0.598437 | 6.2:-56317960 | MS.gene38639:CDS |
| AATGTTGCTTCCACCTCAGG+AGG | 0.603928 | 6.2:-56317460 | MS.gene38639:CDS |
| CTTGTTCACTCTGATGTTTG+GGG | 0.604257 | 6.2:-56316836 | MS.gene38639:intron |
| GTCGGCCAGTTGGCTGACGA+AGG | 0.604740 | 6.2:-56317181 | MS.gene38639:CDS |
| AAATCTTCCAATCATTACCG+TGG | 0.605606 | 6.2:+56317143 | None:intergenic |
| AATCGATGAAGGATGATGAG+TGG | 0.606445 | 6.2:-56318122 | MS.gene38639:CDS |
| AATTGAAAAGTTCGATGGTG+CGG | 0.608192 | 6.2:-56318226 | MS.gene38639:CDS |
| GGCTACACAACAGTCTTCCA+CGG | 0.609498 | 6.2:-56317160 | MS.gene38639:CDS |
| TGGTATTGAATTTGACGATG+AGG | 0.610535 | 6.2:-56317851 | MS.gene38639:CDS |
| ATTCACCCAACTCTCTTCGT+CGG | 0.611639 | 6.2:+56317698 | None:intergenic |
| GGATGCACCGGTGTGTCAGA+CGG | 0.613881 | 6.2:+56316067 | None:intergenic |
| TATGGCTGCAGACGAAGGAA+AGG | 0.614378 | 6.2:-56318253 | MS.gene38639:CDS |
| TCCTGCAAATATGTTAACAA+AGG | 0.615167 | 6.2:-56314484 | MS.gene38639:CDS |
| TTCCAAGGTAAACTTTACCA+AGG | 0.615217 | 6.2:+56317320 | None:intergenic |
| TACATGTTGTTAACTGATGG+AGG | 0.616383 | 6.2:-56315980 | MS.gene38639:CDS |
| GGAGTTATGGCTGCAGACGA+AGG | 0.617375 | 6.2:-56318258 | None:intergenic |
| AGCCTTCATAAGACCAGCGG+TGG | 0.620835 | 6.2:+56318017 | None:intergenic |
| GAATCAAGAGGCGAAAGATG+AGG | 0.623736 | 6.2:-56317485 | MS.gene38639:CDS |
| GCAAAAGAGAAAACCACCGC+TGG | 0.626545 | 6.2:-56318030 | MS.gene38639:CDS |
| CAACGCGTCACCTCCTCCTG+AGG | 0.630580 | 6.2:+56317447 | None:intergenic |
| CAGACAACCGTCTGACACAC+CGG | 0.642310 | 6.2:-56316074 | MS.gene38639:CDS |
| AGAGGAAGAAATTCAACCAG+AGG | 0.643795 | 6.2:-56317643 | MS.gene38639:CDS |
| AAACTTTACCAAGGTTACCA+GGG | 0.648516 | 6.2:+56317329 | None:intergenic |
| ATAGCTCGCGGTAGAAAGAG+TGG | 0.649534 | 6.2:-56317103 | MS.gene38639:CDS |
| TGACTGGGGACTCTCATCTG+TGG | 0.653864 | 6.2:+56316120 | None:intergenic |
| TCAACCAGAGGAAATGGACG+TGG | 0.665050 | 6.2:-56317631 | MS.gene38639:CDS |
| GCTCCCAGCAAAGAATCAAG+AGG | 0.671318 | 6.2:-56317497 | MS.gene38639:CDS |
| GTATTGCATACAGAGTCAAG+AGG | 0.682691 | 6.2:-56317661 | MS.gene38639:CDS |
| TGATGAAGCATGTCAGACCA+CGG | 0.691661 | 6.2:-56315942 | MS.gene38639:CDS |
| AATAGCCTTCATAAGACCAG+CGG | 0.720881 | 6.2:+56318014 | None:intergenic |
| GGTGCAATGACGATAGCTCG+CGG | 0.741901 | 6.2:-56317115 | MS.gene38639:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTTAAGATTAAGTTGAAT+GGG | - | chr6.2:56315416-56315435 | MS.gene38639:intron | 20.0% |
| !!! | CTAACATTGATTAAAATTCA+AGG | - | chr6.2:56318164-56318183 | MS.gene38639:CDS | 20.0% |
| ! | AATACCAACTGAACTTAATT+GGG | + | chr6.2:56314816-56314835 | None:intergenic | 25.0% |
| ! | AATGATTGGAAGATTTCAAA+AGG | - | chr6.2:56315544-56315563 | MS.gene38639:intron | 25.0% |
| ! | AATTCTTGAACAATTCTTTC+TGG | + | chr6.2:56315327-56315346 | None:intergenic | 25.0% |
| ! | ACTGGTTATATATTTACTGT+TGG | - | chr6.2:56317870-56317889 | MS.gene38639:CDS | 25.0% |
| ! | ATTCTTGAACAATTCTTTCT+GGG | + | chr6.2:56315326-56315345 | None:intergenic | 25.0% |
| ! | CAAATAAAGTTCATTTGATG+AGG | - | chr6.2:56314717-56314736 | MS.gene38639:intron | 25.0% |
| ! | CAAATGAAAATCCTAATCTA+TGG | - | chr6.2:56315647-56315666 | MS.gene38639:intron | 25.0% |
| ! | TAGTTTATGTATCTACTGTT+TGG | + | chr6.2:56316682-56316701 | None:intergenic | 25.0% |
| ! | TATATATTTACTGTTGGTAC+TGG | - | chr6.2:56317876-56317895 | MS.gene38639:CDS | 25.0% |
| !!! | GAAGTTAAGATTAAGTTGAA+TGG | - | chr6.2:56315415-56315434 | MS.gene38639:intron | 25.0% |
| AAAGAATTGATATGGCTTCA+AGG | - | chr6.2:56317984-56318003 | MS.gene38639:CDS | 30.0% | |
| AAAGGAGAGATAAAAGTAGA+AGG | - | chr6.2:56317798-56317817 | MS.gene38639:CDS | 30.0% | |
| AAAGTACAAACATTTCTCTG+TGG | + | chr6.2:56317775-56317794 | None:intergenic | 30.0% | |
| AAAGTGCACTTCTTAGATTT+GGG | + | chr6.2:56316355-56316374 | None:intergenic | 30.0% | |
| AAATGTTTGTACTTTGGCAA+AGG | - | chr6.2:56317780-56317799 | MS.gene38639:CDS | 30.0% | |
| AACTACATGTTGTTAACTGA+TGG | - | chr6.2:56316697-56316716 | MS.gene38639:intron | 30.0% | |
| AAGCTAGCAAAGAATTGATA+TGG | - | chr6.2:56317976-56317995 | MS.gene38639:CDS | 30.0% | |
| AATACTTCAGACTTATGCTT+CGG | + | chr6.2:56315905-56315924 | None:intergenic | 30.0% | |
| ACAGAGAAATGTTTGTACTT+TGG | - | chr6.2:56317774-56317793 | MS.gene38639:CDS | 30.0% | |
| ACCTTTGTTAACATATTTGC+AGG | + | chr6.2:56318200-56318219 | None:intergenic | 30.0% | |
| AGAAAAAGGGAAAGAGAATA+TGG | - | chr6.2:56317128-56317147 | MS.gene38639:CDS | 30.0% | |
| AGACAAGTTTGAAGATCAAA+AGG | - | chr6.2:56315963-56315982 | MS.gene38639:CDS | 30.0% | |
| AGGTTAAAGAAAAGCTTGTA+TGG | - | chr6.2:56317156-56317175 | MS.gene38639:CDS | 30.0% | |
| ATAAAGTTCATTTGATGAGG+CGG | - | chr6.2:56314720-56314739 | MS.gene38639:intron | 30.0% | |
| ATATGTGAAGACTGTATACT+TGG | - | chr6.2:56315760-56315779 | MS.gene38639:intron | 30.0% | |
| CAATACCAACTGAACTTAAT+TGG | + | chr6.2:56314817-56314836 | None:intergenic | 30.0% | |
| CAGAAGGATTCTTAGAAAAA+GGG | - | chr6.2:56317115-56317134 | MS.gene38639:CDS | 30.0% | |
| GAATTTGACATGAAGGATTT+AGG | - | chr6.2:56317384-56317403 | MS.gene38639:CDS | 30.0% | |
| GGATGATGAAAACAAAAAGA+TGG | - | chr6.2:56316414-56316433 | MS.gene38639:intron | 30.0% | |
| GTAGCAAAACTTCTTGAATT+TGG | + | chr6.2:56316023-56316042 | None:intergenic | 30.0% | |
| GTCAAAAGAATTTGACATGA+AGG | - | chr6.2:56317377-56317396 | MS.gene38639:CDS | 30.0% | |
| GTGAAAATTGAAAAGTTCGA+TGG | - | chr6.2:56314449-56314468 | MS.gene38639:CDS | 30.0% | |
| TACATGATTGTTCATTTCCA+AGG | + | chr6.2:56315378-56315397 | None:intergenic | 30.0% | |
| TATAACCAGTTGTACTTCTT+CGG | + | chr6.2:56317860-56317879 | None:intergenic | 30.0% | |
| TATGTGCATATTAGTGATCA+AGG | - | chr6.2:56316313-56316332 | MS.gene38639:intron | 30.0% | |
| TCCTGCAAATATGTTAACAA+AGG | - | chr6.2:56318196-56318215 | MS.gene38639:CDS | 30.0% | |
| TCTTCCATTTCTACATAAAC+AGG | + | chr6.2:56316526-56316545 | None:intergenic | 30.0% | |
| TGCAAATATGTTAACAAAGG+TGG | - | chr6.2:56318199-56318218 | MS.gene38639:CDS | 30.0% | |
| TGGAAATGAACAATCATGTA+AGG | - | chr6.2:56315378-56315397 | MS.gene38639:intron | 30.0% | |
| TGTTGAATCTTTGCAAAACA+CGG | + | chr6.2:56317494-56317513 | None:intergenic | 30.0% | |
| TTTGATCTCAAATCAGACAT+GGG | - | chr6.2:56316804-56316823 | MS.gene38639:intron | 30.0% | |
| ! | ATTCCAAGAATTTTCTTTGC+CGG | + | chr6.2:56317411-56317430 | None:intergenic | 30.0% |
| ! | GTTTTGCAAAGATTCAACAT+GGG | - | chr6.2:56317495-56317514 | MS.gene38639:CDS | 30.0% |
| ! | TATTTGAAGCTTTCAAGAGA+TGG | - | chr6.2:56315921-56315940 | MS.gene38639:intron | 30.0% |
| ! | TGAACTTTATTTGATGCTGA+AGG | + | chr6.2:56314710-56314729 | None:intergenic | 30.0% |
| ! | TGTTTTGCAAAGATTCAACA+TGG | - | chr6.2:56317494-56317513 | MS.gene38639:CDS | 30.0% |
| AAACTTTACCAAGGTTACCA+GGG | + | chr6.2:56315354-56315373 | None:intergenic | 35.0% | |
| AAAGAAACCAGAATCGATGA+AGG | - | chr6.2:56314547-56314566 | MS.gene38639:intron | 35.0% | |
| AAATCCAGGTAAAGCTCATT+GGG | - | chr6.2:56317713-56317732 | MS.gene38639:CDS | 35.0% | |
| AAATCTTCCAATCATTACCG+TGG | + | chr6.2:56315540-56315559 | None:intergenic | 35.0% | |
| AAATGGACGTGGTAAATCAA+AGG | - | chr6.2:56315060-56315079 | MS.gene38639:intron | 35.0% | |
| AACAACAGTCTAAGAAGGTA+TGG | - | chr6.2:56315870-56315889 | MS.gene38639:intron | 35.0% | |
| AACCTTGGTAAAGTTTACCT+TGG | - | chr6.2:56315358-56315377 | MS.gene38639:intron | 35.0% | |
| AAGGAAAACTACCAAGTCTT+CGG | - | chr6.2:56315722-56315741 | MS.gene38639:intron | 35.0% | |
| AATCTATGGCACAAGAGATT+AGG | - | chr6.2:56315661-56315680 | MS.gene38639:intron | 35.0% | |
| AATCTCTTGTGCCATAGATT+AGG | + | chr6.2:56315661-56315680 | None:intergenic | 35.0% | |
| AATTGAAAAGTTCGATGGTG+CGG | - | chr6.2:56314454-56314473 | MS.gene38639:CDS | 35.0% | |
| ACAACCCAATTAAGTTCAGT+TGG | - | chr6.2:56314809-56314828 | MS.gene38639:intron | 35.0% | |
| ACGAAAAACTTAATCTCCGT+CGG | - | chr6.2:56315481-56315500 | MS.gene38639:intron | 35.0% | |
| AGAAATTCAACCAGAGGAAA+TGG | - | chr6.2:56315043-56315062 | MS.gene38639:intron | 35.0% | |
| AGACTTCATTTCGTCTTTCA+TGG | + | chr6.2:56316785-56316804 | None:intergenic | 35.0% | |
| ATACCTTCTTAGACTGTTGT+TGG | + | chr6.2:56315871-56315890 | None:intergenic | 35.0% | |
| ATCACGAGAGATAAGCAAAA+AGG | - | chr6.2:56317435-56317454 | MS.gene38639:CDS | 35.0% | |
| ATCTCTTGAAGAAGCAACAA+TGG | + | chr6.2:56317263-56317282 | None:intergenic | 35.0% | |
| ATGAAGGTTATGCACTCAAA+AGG | - | chr6.2:56315703-56315722 | MS.gene38639:intron | 35.0% | |
| ATTTCTATTGACCGAAGACT+TGG | + | chr6.2:56315736-56315755 | None:intergenic | 35.0% | |
| CATGCTTCATCATAATCTTC+AGG | + | chr6.2:56316730-56316749 | None:intergenic | 35.0% | |
| CCAGAAGGATTCTTAGAAAA+AGG | - | chr6.2:56317114-56317133 | MS.gene38639:CDS | 35.0% | |
| CTTTGATCTCAAATCAGACA+TGG | - | chr6.2:56316803-56316822 | MS.gene38639:intron | 35.0% | |
| GAACAATCATGTAAGGTTGT+GGG | - | chr6.2:56315385-56315404 | MS.gene38639:intron | 35.0% | |
| GACACTTCAAAAATCAGTGT+AGG | - | chr6.2:56315161-56315180 | MS.gene38639:intron | 35.0% | |
| GTGAAAACTGCATTTCTTCA+TGG | - | chr6.2:56317060-56317079 | MS.gene38639:CDS | 35.0% | |
| GTTTGAAAACTTCATGCACA+AGG | - | chr6.2:56317212-56317231 | MS.gene38639:CDS | 35.0% | |
| TAAACTTTACCAAGGTTACC+AGG | + | chr6.2:56315355-56315374 | None:intergenic | 35.0% | |
| TACATGTTGTTAACTGATGG+AGG | - | chr6.2:56316700-56316719 | MS.gene38639:intron | 35.0% | |
| TAGGCCATATGAGTGAAAAA+GGG | - | chr6.2:56315680-56315699 | MS.gene38639:intron | 35.0% | |
| TATGAGTGAAAAAGGGATGA+AGG | - | chr6.2:56315687-56315706 | MS.gene38639:intron | 35.0% | |
| TCTAGAAGACCTTCTTAGTT+CGG | + | chr6.2:56316650-56316669 | None:intergenic | 35.0% | |
| TCTTCATGGAGACTTAAATG+AGG | - | chr6.2:56317074-56317093 | MS.gene38639:CDS | 35.0% | |
| TGAACAATCATGTAAGGTTG+TGG | - | chr6.2:56315384-56315403 | MS.gene38639:intron | 35.0% | |
| TTAGGCCATATGAGTGAAAA+AGG | - | chr6.2:56315679-56315698 | MS.gene38639:intron | 35.0% | |
| TTCATATTCACCACCATTGT+CGG | + | chr6.2:56315996-56316015 | None:intergenic | 35.0% | |
| TTCCAAGGTAAACTTTACCA+AGG | + | chr6.2:56315363-56315382 | None:intergenic | 35.0% | |
| TTGTTCAAGAATTATGTCCC+TGG | - | chr6.2:56315334-56315353 | MS.gene38639:intron | 35.0% | |
| TTGTTGCAACTGCAATCAAA+TGG | + | chr6.2:56315630-56315649 | None:intergenic | 35.0% | |
| ! | ACAACAGTCTAAGAAGGTAT+GGG | - | chr6.2:56315871-56315890 | MS.gene38639:intron | 35.0% |
| ! | ACTACGATGATTTCTGGATT+TGG | + | chr6.2:56315095-56315114 | None:intergenic | 35.0% |
| ! | ATTAAGTTTTTCGTGAGGTC+GGG | + | chr6.2:56315475-56315494 | None:intergenic | 35.0% |
| ! | CTCTCACATCTTAGAGTTTT+CGG | - | chr6.2:56316280-56316299 | MS.gene38639:intron | 35.0% |
| ! | GAAAGTGCACTTCTTAGATT+TGG | + | chr6.2:56316356-56316375 | None:intergenic | 35.0% |
| ! | GATTAAGTTTTTCGTGAGGT+CGG | + | chr6.2:56315476-56315495 | None:intergenic | 35.0% |
| ! | TAAGTTGAATGGGTCTGTAT+GGG | - | chr6.2:56315426-56315445 | MS.gene38639:intron | 35.0% |
| ! | TCTAAGAAGTGCACTTTCAT+CGG | - | chr6.2:56316358-56316377 | MS.gene38639:intron | 35.0% |
| ! | TCTGGTATTTTATGCTCCAA+TGG | + | chr6.2:56316232-56316251 | None:intergenic | 35.0% |
| ! | TGGTATTGAATTTGACGATG+AGG | - | chr6.2:56314829-56314848 | MS.gene38639:intron | 35.0% |
| ! | TTTCTAAGAATCCTTCTGGT+TGG | + | chr6.2:56317113-56317132 | None:intergenic | 35.0% |
| !! | AAGCGGTTAAATGGATTTTG+AGG | - | chr6.2:56317736-56317755 | MS.gene38639:CDS | 35.0% |
| !! | ATTTGATGATGTTCGTGATC+TGG | - | chr6.2:56314943-56314962 | MS.gene38639:intron | 35.0% |
| !! | CCTTTTTCTAAGAATCCTTC+TGG | + | chr6.2:56317117-56317136 | None:intergenic | 35.0% |
| !! | GTTGATGATATGTTAGTAGC+AGG | - | chr6.2:56317315-56317334 | MS.gene38639:CDS | 35.0% |
| !! | TCATCCCTTTTTCACTCATA+TGG | + | chr6.2:56315687-56315706 | None:intergenic | 35.0% |
| !! | TTAAGTTGAATGGGTCTGTA+TGG | - | chr6.2:56315425-56315444 | MS.gene38639:intron | 35.0% |
| !!! | TGGATTTTGAGGTATCTAAG+AGG | - | chr6.2:56317747-56317766 | MS.gene38639:CDS | 35.0% |
| !!! | TTTTGTTTTCATCATCCCAG+AGG | + | chr6.2:56316411-56316430 | None:intergenic | 35.0% |
| AACTTCATATACCACTGCCT+TGG | + | chr6.2:56317195-56317214 | None:intergenic | 40.0% | |
| AAGTTGTGCTCAACTTCAGT+TGG | - | chr6.2:56318239-56318258 | MS.gene38639:CDS | 40.0% | |
| AATAGCCTTCATAAGACCAG+CGG | + | chr6.2:56314669-56314688 | None:intergenic | 40.0% | |
| AATCGATGAAGGATGATGAG+TGG | - | chr6.2:56314558-56314577 | MS.gene38639:intron | 40.0% | |
| AATTATGTCCCTGGTAACCT+TGG | - | chr6.2:56315343-56315362 | MS.gene38639:intron | 40.0% | |
| ACTCGAAATCTATCGAGTGT+TGG | - | chr6.2:56315122-56315141 | MS.gene38639:intron | 40.0% | |
| AGAGGAAGAAATTCAACCAG+AGG | - | chr6.2:56315037-56315056 | MS.gene38639:intron | 40.0% | |
| AGCAGGTTTATGTCAAATCC+AGG | - | chr6.2:56317699-56317718 | MS.gene38639:CDS | 40.0% | |
| AGCTCAAGTTTCTCCTTCTT+TGG | + | chr6.2:56315826-56315845 | None:intergenic | 40.0% | |
| ATATACATGCTCCAACCAGA+AGG | - | chr6.2:56317099-56317118 | MS.gene38639:CDS | 40.0% | |
| ATTCCATATGCTTCGGCAAT+TGG | - | chr6.2:56317615-56317634 | MS.gene38639:CDS | 40.0% | |
| CAAATCCAGGTAAAGCTCAT+TGG | - | chr6.2:56317712-56317731 | MS.gene38639:CDS | 40.0% | |
| CAAATGGGTCTATCGAGTAA+AGG | - | chr6.2:56316867-56316886 | MS.gene38639:CDS | 40.0% | |
| CAAGGATTGTTGACAGAGTT+AGG | - | chr6.2:56318002-56318021 | MS.gene38639:CDS | 40.0% | |
| CATTCGAGAACAAAGCACAT+AGG | - | chr6.2:56318098-56318117 | MS.gene38639:CDS | 40.0% | |
| CGAGCCTGTTTATGTAGAAA+TGG | - | chr6.2:56316519-56316538 | MS.gene38639:intron | 40.0% | |
| CTAGAAGACCTTCTTAGTTC+GGG | + | chr6.2:56316649-56316668 | None:intergenic | 40.0% | |
| CTCAAGTTTCTCCTTCTTTG+GGG | + | chr6.2:56315824-56315843 | None:intergenic | 40.0% | |
| CTCTGTATGCAATACTGAAG+AGG | + | chr6.2:56315014-56315033 | None:intergenic | 40.0% | |
| CTGAGAACTACGATGATTTC+TGG | + | chr6.2:56315101-56315120 | None:intergenic | 40.0% | |
| CTTCATCAGATCTCTTCTTG+AGG | - | chr6.2:56318133-56318152 | MS.gene38639:CDS | 40.0% | |
| CTTGTTCACTCTGATGTTTG+GGG | - | chr6.2:56315844-56315863 | MS.gene38639:intron | 40.0% | |
| GAAAACTTCATGCACAAGGA+AGG | - | chr6.2:56317216-56317235 | MS.gene38639:CDS | 40.0% | |
| GCTCAAGTTTCTCCTTCTTT+GGG | + | chr6.2:56315825-56315844 | None:intergenic | 40.0% | |
| GCTTGTTCACTCTGATGTTT+GGG | - | chr6.2:56315843-56315862 | MS.gene38639:intron | 40.0% | |
| GGAGCATAAAATACCAGAAG+AGG | - | chr6.2:56316234-56316253 | MS.gene38639:intron | 40.0% | |
| GGAGGAAGAAAAAGAACTCA+TGG | - | chr6.2:56317587-56317606 | MS.gene38639:CDS | 40.0% | |
| GGCTAAGATTCCATATGCTT+CGG | - | chr6.2:56317608-56317627 | MS.gene38639:CDS | 40.0% | |
| GGTTATGGTGAAGATGAGTT+TGG | - | chr6.2:56316379-56316398 | MS.gene38639:intron | 40.0% | |
| GTAGAAATGGAAGATGTTCC+AGG | - | chr6.2:56316532-56316551 | MS.gene38639:intron | 40.0% | |
| GTATTGCATACAGAGTCAAG+AGG | - | chr6.2:56315019-56315038 | MS.gene38639:intron | 40.0% | |
| GTGTTGGAATTGTGGAAAGA+CGG | - | chr6.2:56315138-56315157 | MS.gene38639:intron | 40.0% | |
| TGACATGAAGGATTTAGGTC+CGG | - | chr6.2:56317389-56317408 | MS.gene38639:CDS | 40.0% | |
| TGAGTTACCCATAGGAAAGA+AGG | - | chr6.2:56316834-56316853 | MS.gene38639:intron | 40.0% | |
| TGGAAGTTTGATGTACGCAA+TGG | - | chr6.2:56317635-56317654 | MS.gene38639:CDS | 40.0% | |
| TGGTGAAGCTCAATACTATC+AGG | - | chr6.2:56316986-56317005 | MS.gene38639:CDS | 40.0% | |
| TGTATCTCTTAGAGCCATCA+TGG | + | chr6.2:56316897-56316916 | None:intergenic | 40.0% | |
| TGTTCCTTTATCCACTACAG+AGG | - | chr6.2:56317932-56317951 | MS.gene38639:CDS | 40.0% | |
| TGTTGGAATTGTGGAAAGAC+GGG | - | chr6.2:56315139-56315158 | MS.gene38639:intron | 40.0% | |
| TTTACACTTCGGATGACAGA+AGG | - | chr6.2:56314746-56314765 | MS.gene38639:intron | 40.0% | |
| TTTCAAGAGATGGAAAGCCA+TGG | - | chr6.2:56315931-56315950 | MS.gene38639:intron | 40.0% | |
| TTTCCACTCTATACCTCTTC+TGG | + | chr6.2:56316250-56316269 | None:intergenic | 40.0% | |
| ! | AAGAAGTTTTGCTACGAGCA+CGG | - | chr6.2:56316028-56316047 | MS.gene38639:CDS | 40.0% |
| ! | AAGTGCACTTTCATCGGTTA+TGG | - | chr6.2:56316364-56316383 | MS.gene38639:intron | 40.0% |
| ! | ACTTGTCTCATTTTCCACCA+TGG | + | chr6.2:56315951-56315970 | None:intergenic | 40.0% |
| ! | AGAGGTATAGAGTGGAAAAG+AGG | - | chr6.2:56316252-56316271 | MS.gene38639:intron | 40.0% |
| ! | AGCTTGTTCACTCTGATGTT+TGG | - | chr6.2:56315842-56315861 | MS.gene38639:intron | 40.0% |
| ! | ATACCAGAAGAGGTATAGAG+TGG | - | chr6.2:56316244-56316263 | MS.gene38639:intron | 40.0% |
| ! | ATAGTATTGAGCTTCACCAC+TGG | + | chr6.2:56316985-56317004 | None:intergenic | 40.0% |
| ! | ATTTCTGGATTTGGATCGTC+TGG | + | chr6.2:56315086-56315105 | None:intergenic | 40.0% |
| ! | CGGAGATTAAGTTTTTCGTG+AGG | + | chr6.2:56315480-56315499 | None:intergenic | 40.0% |
| ! | CTCAAGATAGAGATTTTCGC+TGG | + | chr6.2:56317031-56317050 | None:intergenic | 40.0% |
| ! | GATATGTTCTTTGGAGAGCA+AGG | - | chr6.2:56315255-56315274 | MS.gene38639:intron | 40.0% |
| ! | TGAAGTGCCTTCTTTCCTAT+GGG | + | chr6.2:56316844-56316863 | None:intergenic | 40.0% |
| ! | TGACGCGTTGATATGTTCTT+TGG | - | chr6.2:56315246-56315265 | MS.gene38639:intron | 40.0% |
| ! | TTTCATCTTTTTGCTTCCCG+AGG | + | chr6.2:56314924-56314943 | None:intergenic | 40.0% |
| !! | AGAAGGCACTTCACAACAAA+TGG | - | chr6.2:56316851-56316870 | MS.gene38639:CDS | 40.0% |
| !! | GAAGGCACTTCACAACAAAT+GGG | - | chr6.2:56316852-56316871 | MS.gene38639:CDS | 40.0% |
| !! | TCATCATCCTTCATCGATTC+TGG | + | chr6.2:56314557-56314576 | None:intergenic | 40.0% |
| !! | TCTATCGAGTGTTGGAATTG+TGG | - | chr6.2:56315130-56315149 | MS.gene38639:intron | 40.0% |
| !! | TCTGGTTTCTTTTCTGTGAG+AGG | + | chr6.2:56314539-56314558 | None:intergenic | 40.0% |
| AAAAGGCTCAGAACCGACAA+TGG | - | chr6.2:56315980-56315999 | MS.gene38639:CDS | 45.0% | |
| AAAGGATTCCAGCAGAAGGA+AGG | - | chr6.2:56316934-56316953 | MS.gene38639:CDS | 45.0% | |
| AAGTGGAAGAACCCCAAAGA+AGG | - | chr6.2:56315810-56315829 | MS.gene38639:intron | 45.0% | |
| AATGGTCGACATTGCACTTC+TGG | + | chr6.2:56317245-56317264 | None:intergenic | 45.0% | |
| AGAGTCAGCTTTCAGACAAG+TGG | - | chr6.2:56315793-56315812 | MS.gene38639:intron | 45.0% | |
| AGGTAAAGCTCATTGGGAAG+CGG | - | chr6.2:56317719-56317738 | MS.gene38639:CDS | 45.0% | |
| AGTCAATTCCTTCCTTCTGC+TGG | + | chr6.2:56316945-56316964 | None:intergenic | 45.0% | |
| ATGGGTCTATCGAGTAAAGG+AGG | - | chr6.2:56316870-56316889 | MS.gene38639:CDS | 45.0% | |
| ATTCACCCAACTCTCTTCGT+CGG | + | chr6.2:56314985-56315004 | None:intergenic | 45.0% | |
| ATTCTGCCAATTCCTCTGAC+TGG | + | chr6.2:56316579-56316598 | None:intergenic | 45.0% | |
| CAAACCGGTTAGCACATCTT+TGG | - | chr6.2:56317524-56317543 | MS.gene38639:CDS | 45.0% | |
| CAAAGATGTGCTAACCGGTT+TGG | + | chr6.2:56317526-56317545 | None:intergenic | 45.0% | |
| CACCACTGGAGCAAAAATCT+CGG | + | chr6.2:56316971-56316990 | None:intergenic | 45.0% | |
| CAGATCTCTTCTTGAGGATG+AGG | - | chr6.2:56318139-56318158 | MS.gene38639:CDS | 45.0% | |
| CAGGCTTACCAAAGAACTTC+TGG | - | chr6.2:56316155-56316174 | MS.gene38639:intron | 45.0% | |
| CAGTCTTCCACGGTAATGAT+TGG | - | chr6.2:56315530-56315549 | MS.gene38639:intron | 45.0% | |
| CCAAGAACAATCACCTCAGA+CGG | - | chr6.2:56317566-56317585 | MS.gene38639:CDS | 45.0% | |
| CTCAGCTACACCATTGTGTT+GGG | + | chr6.2:56316086-56316105 | None:intergenic | 45.0% | |
| CTCATTGGGAAGCGGTTAAA+TGG | - | chr6.2:56317727-56317746 | MS.gene38639:CDS | 45.0% | |
| CTGGCACAGTTCTTTCCATT+CGG | + | chr6.2:56316057-56316076 | None:intergenic | 45.0% | |
| CTTCCAATTGCCGAAGCATA+TGG | + | chr6.2:56317621-56317640 | None:intergenic | 45.0% | |
| CTTGCCAAAGATGTGCTAAC+CGG | + | chr6.2:56317531-56317550 | None:intergenic | 45.0% | |
| GAATCAAGAGGCGAAAGATG+AGG | - | chr6.2:56315195-56315214 | MS.gene38639:intron | 45.0% | |
| GAATCCTTTGACCACTAGTC+GGG | + | chr6.2:56316923-56316942 | None:intergenic | 45.0% | |
| GACAGAGTTAGGATTCATGC+AGG | - | chr6.2:56318013-56318032 | MS.gene38639:CDS | 45.0% | |
| GAGGTGATTGTTCTTGGGAT+AGG | + | chr6.2:56317563-56317582 | None:intergenic | 45.0% | |
| GCTTCTGTCCAGAAGTTCTT+TGG | + | chr6.2:56316166-56316185 | None:intergenic | 45.0% | |
| GGAAAGAGAATATGGTGTGC+AGG | - | chr6.2:56317136-56317155 | MS.gene38639:CDS | 45.0% | |
| GGAATCCTTTGACCACTAGT+CGG | + | chr6.2:56316924-56316943 | None:intergenic | 45.0% | |
| GGTACTCTTTACAAGACAGC+TGG | - | chr6.2:56315598-56315617 | MS.gene38639:intron | 45.0% | |
| GGTCCAACAACAGTCTAAGA+AGG | - | chr6.2:56315865-56315884 | MS.gene38639:intron | 45.0% | |
| GGTCCGGCAAAGAAAATTCT+TGG | - | chr6.2:56317405-56317424 | MS.gene38639:CDS | 45.0% | |
| TACATACTCAGCCTCTGTAG+TGG | + | chr6.2:56317946-56317965 | None:intergenic | 45.0% | |
| TACGTAGATGCAGACTTTGC+TGG | - | chr6.2:56317822-56317841 | MS.gene38639:CDS | 45.0% | |
| TAGTCAGAGTGCGATACATC+TGG | - | chr6.2:56318058-56318077 | MS.gene38639:CDS | 45.0% | |
| TCAGCTACACCATTGTGTTG+GGG | + | chr6.2:56316085-56316104 | None:intergenic | 45.0% | |
| TCAGCTTACTTAATCAGCCG+AGG | - | chr6.2:56316196-56316215 | MS.gene38639:intron | 45.0% | |
| TCATGTAAGGTTGTGGGCAA+AGG | - | chr6.2:56315391-56315410 | MS.gene38639:intron | 45.0% | |
| TCGCCTCTTGATTCTTTGCT+GGG | + | chr6.2:56315189-56315208 | None:intergenic | 45.0% | |
| TGAGGCGGTTGTTTACACTT+CGG | - | chr6.2:56314735-56314754 | MS.gene38639:intron | 45.0% | |
| TGATGAAGCATGTCAGACCA+CGG | - | chr6.2:56316738-56316757 | MS.gene38639:intron | 45.0% | |
| TGTCTTCCCTACCAGATAGT+TGG | - | chr6.2:56314870-56314889 | MS.gene38639:intron | 45.0% | |
| TTCGCCTCTTGATTCTTTGC+TGG | + | chr6.2:56315190-56315209 | None:intergenic | 45.0% | |
| TTCTGCCAATTCCTCTGACT+GGG | + | chr6.2:56316578-56316597 | None:intergenic | 45.0% | |
| TTTACCACGTCCATTTCCTC+TGG | + | chr6.2:56315056-56315075 | None:intergenic | 45.0% | |
| ! | AGAAGTTTTGCTACGAGCAC+GGG | - | chr6.2:56316029-56316048 | MS.gene38639:CDS | 45.0% |
| ! | CGTCTGAGGTGATTGTTCTT+GGG | + | chr6.2:56317568-56317587 | None:intergenic | 45.0% |
| ! | GATCACCGAAGAAGTACAAC+TGG | - | chr6.2:56317852-56317871 | MS.gene38639:CDS | 45.0% |
| ! | GTGAAGTGCCTTCTTTCCTA+TGG | + | chr6.2:56316845-56316864 | None:intergenic | 45.0% |
| ! | TCTTTTTCTTCCTCCGTCTG+AGG | + | chr6.2:56317582-56317601 | None:intergenic | 45.0% |
| ! | TGTTTTCATCATCCCAGAGG+CGG | + | chr6.2:56316408-56316427 | None:intergenic | 45.0% |
| ! | TTGGTACTGGAGCAGTTAGT+TGG | - | chr6.2:56317889-56317908 | MS.gene38639:CDS | 45.0% |
| !! | TCAGCCTCTGTAGTGGATAA+AGG | + | chr6.2:56317939-56317958 | None:intergenic | 45.0% |
| AAAGCCCGACTAGTGGTCAA+AGG | - | chr6.2:56316916-56316935 | MS.gene38639:CDS | 50.0% | |
| AAGTTCGATGGTGCGGACTT+TGG | - | chr6.2:56314461-56314480 | MS.gene38639:CDS | 50.0% | |
| ACAGTAGCGCTCCAACTATC+TGG | + | chr6.2:56314884-56314903 | None:intergenic | 50.0% | |
| AGAACAATCACCTCAGACGG+AGG | - | chr6.2:56317569-56317588 | MS.gene38639:CDS | 50.0% | |
| AGACCACGGATGCTAGTAAG+TGG | - | chr6.2:56316752-56316771 | MS.gene38639:intron | 50.0% | |
| AGAGATCCGACGAAGAGAGT+TGG | - | chr6.2:56314976-56314995 | MS.gene38639:intron | 50.0% | |
| AGAGTGCGATACATCTGGCA+AGG | - | chr6.2:56318063-56318082 | MS.gene38639:CDS | 50.0% | |
| AGCGCTCCAACTATCTGGTA+GGG | + | chr6.2:56314879-56314898 | None:intergenic | 50.0% | |
| ATAGCTCGCGGTAGAAAGAG+TGG | - | chr6.2:56315577-56315596 | MS.gene38639:intron | 50.0% | |
| ATGCAGTGGGAGTTGTTAGC+AGG | - | chr6.2:56317682-56317701 | MS.gene38639:CDS | 50.0% | |
| ATGGCCTGAAACAAGCTCCA+AGG | - | chr6.2:56317175-56317194 | MS.gene38639:CDS | 50.0% | |
| CAAGAGATGGAAAGCCATGG+TGG | - | chr6.2:56315934-56315953 | MS.gene38639:intron | 50.0% | |
| CAAGTGCTTGTCTGTCGAGA+AGG | + | chr6.2:56314586-56314605 | None:intergenic | 50.0% | |
| CGAATGGAAAGAACTGTGCC+AGG | - | chr6.2:56316055-56316074 | MS.gene38639:CDS | 50.0% | |
| CGAGTAAAGGAGGACCATGA+TGG | - | chr6.2:56316880-56316899 | MS.gene38639:CDS | 50.0% | |
| CTCCTGTTCCCGAACTAAGA+AGG | - | chr6.2:56316638-56316657 | MS.gene38639:intron | 50.0% | |
| CTCGCTCAATCTTGAGTCGT+TGG | + | chr6.2:56316503-56316522 | None:intergenic | 50.0% | |
| CTCTCATCTGTGGTACTTCC+TGG | + | chr6.2:56316553-56316572 | None:intergenic | 50.0% | |
| CTTAATCAGCCGAGGTCCAT+CGG | - | chr6.2:56316204-56316223 | MS.gene38639:intron | 50.0% | |
| CTTAGTTCGGGAACAGGAGT+AGG | + | chr6.2:56316637-56316656 | None:intergenic | 50.0% | |
| CTTCTCGACAGACAAGCACT+TGG | - | chr6.2:56314584-56314603 | MS.gene38639:intron | 50.0% | |
| GACCACGGATGCTAGTAAGT+GGG | - | chr6.2:56316753-56316772 | MS.gene38639:intron | 50.0% | |
| GACCTTCTTAGTTCGGGAAC+AGG | + | chr6.2:56316643-56316662 | None:intergenic | 50.0% | |
| GAGATACAAAGCCCGACTAG+TGG | - | chr6.2:56316909-56316928 | MS.gene38639:CDS | 50.0% | |
| GAGATCCGACGAAGAGAGTT+GGG | - | chr6.2:56314977-56314996 | MS.gene38639:intron | 50.0% | |
| GAGCTAGCTGAGTTACCCAT+AGG | - | chr6.2:56316826-56316845 | MS.gene38639:intron | 50.0% | |
| GAGTCTTGGGTGTTAGACTC+TGG | - | chr6.2:56315280-56315299 | MS.gene38639:intron | 50.0% | |
| GCAAAAGAGAAAACCACCGC+TGG | - | chr6.2:56314650-56314669 | MS.gene38639:intron | 50.0% | |
| GCTCAATCTTGAGTCGTTGG+TGG | + | chr6.2:56316500-56316519 | None:intergenic | 50.0% | |
| GCTCAGCTACACCATTGTGT+TGG | + | chr6.2:56316087-56316106 | None:intergenic | 50.0% | |
| GCTCCCAGCAAAGAATCAAG+AGG | - | chr6.2:56315183-56315202 | MS.gene38639:intron | 50.0% | |
| GCTTCCCAATGAGCTTTACC+TGG | + | chr6.2:56317720-56317739 | None:intergenic | 50.0% | |
| GGAGAGCAAGGAAGAGTCTT+GGG | - | chr6.2:56315267-56315286 | MS.gene38639:intron | 50.0% | |
| GGCTACACAACAGTCTTCCA+CGG | - | chr6.2:56315520-56315539 | MS.gene38639:intron | 50.0% | |
| GGTCAAAGGATTCCAGCAGA+AGG | - | chr6.2:56316930-56316949 | MS.gene38639:CDS | 50.0% | |
| TAGCGCTCCAACTATCTGGT+AGG | + | chr6.2:56314880-56314899 | None:intergenic | 50.0% | |
| TCAACCAGAGGAAATGGACG+TGG | - | chr6.2:56315049-56315068 | MS.gene38639:intron | 50.0% | |
| TCTGCCAATTCCTCTGACTG+GGG | + | chr6.2:56316577-56316596 | None:intergenic | 50.0% | |
| TGAAACAAGCTCCAAGGCAG+TGG | - | chr6.2:56317181-56317200 | MS.gene38639:CDS | 50.0% | |
| TGCTAACAACTCCCACTGCA+TGG | + | chr6.2:56317683-56317702 | None:intergenic | 50.0% | |
| TGGAGAGCAAGGAAGAGTCT+TGG | - | chr6.2:56315266-56315285 | MS.gene38639:intron | 50.0% | |
| TGTACGCAATGGTCTGTACG+AGG | - | chr6.2:56317646-56317665 | MS.gene38639:CDS | 50.0% | |
| ! | AATGTTGCTTCCACCTCAGG+AGG | - | chr6.2:56315220-56315239 | MS.gene38639:intron | 50.0% |
| ! | ACTGCCTTGGAGCTTGTTTC+AGG | + | chr6.2:56317182-56317201 | None:intergenic | 50.0% |
| ! | CACCGAGATTTTTGCTCCAG+TGG | - | chr6.2:56316966-56316985 | MS.gene38639:CDS | 50.0% |
| ! | CCGTCTGAGGTGATTGTTCT+TGG | + | chr6.2:56317569-56317588 | None:intergenic | 50.0% |
| ! | GCAAATGTTGCTTCCACCTC+AGG | - | chr6.2:56315217-56315236 | MS.gene38639:intron | 50.0% |
| ! | TTATGCTCCAATGGCACCGA+TGG | + | chr6.2:56316223-56316242 | None:intergenic | 50.0% |
| !! | AACCACCGCTGGTCTTATGA+AGG | - | chr6.2:56314661-56314680 | MS.gene38639:intron | 50.0% |
| !!! | ATGGTGCGGACTTTGGCTTT+TGG | - | chr6.2:56314468-56314487 | MS.gene38639:CDS | 50.0% |
| ACAGCTGTGAGTAGCTCCTC+GGG | - | chr6.2:56314905-56314924 | MS.gene38639:intron | 55.0% | |
| AGAAGCTTGCGTGTGCAGTC+AGG | - | chr6.2:56316136-56316155 | MS.gene38639:CDS | 55.0% | |
| AGATGAGAGTCCCCAGTCAG+AGG | - | chr6.2:56316564-56316583 | MS.gene38639:intron | 55.0% | |
| AGCCTTCATAAGACCAGCGG+TGG | + | chr6.2:56314666-56314685 | None:intergenic | 55.0% | |
| AGGCTCAGAACCGACAATGG+TGG | - | chr6.2:56315983-56316002 | MS.gene38639:CDS | 55.0% | |
| ATGAGTTTGGCTACCGCCTC+TGG | - | chr6.2:56316392-56316411 | MS.gene38639:intron | 55.0% | |
| CAACATGGGCGATGCCAAAC+CGG | - | chr6.2:56317509-56317528 | MS.gene38639:CDS | 55.0% | |
| CACAGCTGTGAGTAGCTCCT+CGG | - | chr6.2:56314904-56314923 | MS.gene38639:intron | 55.0% | |
| CAGACAACCGTCTGACACAC+CGG | - | chr6.2:56316606-56316625 | MS.gene38639:intron | 55.0% | |
| CCAGACATTGGCCATGCAGT+GGG | - | chr6.2:56317669-56317688 | MS.gene38639:CDS | 55.0% | |
| CCAGGTACTCCCCAACACAA+TGG | - | chr6.2:56316073-56316092 | MS.gene38639:CDS | 55.0% | |
| CTCCCACTTACTAGCATCCG+TGG | + | chr6.2:56316758-56316777 | None:intergenic | 55.0% | |
| CTTAATCTCCGTCGGCCAGT+TGG | - | chr6.2:56315489-56315508 | MS.gene38639:intron | 55.0% | |
| GAGTCCCCAGTCAGAGGAAT+TGG | - | chr6.2:56316570-56316589 | MS.gene38639:intron | 55.0% | |
| GGAACAGGAGTAGGATGCAC+CGG | + | chr6.2:56316628-56316647 | None:intergenic | 55.0% | |
| GGTGCAATGACGATAGCTCG+CGG | - | chr6.2:56315565-56315584 | MS.gene38639:intron | 55.0% | |
| GTCTGTACGAGGCCAGACAT+TGG | - | chr6.2:56317657-56317676 | MS.gene38639:CDS | 55.0% | |
| TGACTGCACACGCAAGCTTC+TGG | + | chr6.2:56316137-56316156 | None:intergenic | 55.0% | |
| TGACTGGGGACTCTCATCTG+TGG | + | chr6.2:56316563-56316582 | None:intergenic | 55.0% | |
| TGAGTTTGGCTACCGCCTCT+GGG | - | chr6.2:56316393-56316412 | MS.gene38639:intron | 55.0% | |
| TGTAGCCTTCGTCAGCCAAC+TGG | + | chr6.2:56315507-56315526 | None:intergenic | 55.0% | |
| ! | GATGACAGAAGGCGCATCAG+TGG | - | chr6.2:56314757-56314776 | MS.gene38639:intron | 55.0% |
| !! | CCATTGTGTTGGGGAGTACC+TGG | + | chr6.2:56316076-56316095 | None:intergenic | 55.0% |
| CCCACTGCATGGCCAATGTC+TGG | + | chr6.2:56317672-56317691 | None:intergenic | 60.0% | |
| CTACGAGCACGGGATCCGAA+TGG | - | chr6.2:56316039-56316058 | MS.gene38639:CDS | 60.0% | |
| GCCAGACATTGGCCATGCAG+TGG | - | chr6.2:56317668-56317687 | MS.gene38639:CDS | 60.0% | |
| GTTGCTTCCACCTCAGGAGG+AGG | - | chr6.2:56315223-56315242 | MS.gene38639:intron | 60.0% | |
| TTCGTCAGCCAACTGGCCGA+CGG | + | chr6.2:56315500-56315519 | None:intergenic | 60.0% | |
| ! | GGATGCACCGGTGTGTCAGA+CGG | + | chr6.2:56316616-56316635 | None:intergenic | 60.0% |
| !! | CCAATGGCACCGATGGACCT+CGG | + | chr6.2:56316216-56316235 | None:intergenic | 60.0% |
| CAACGCGTCACCTCCTCCTG+AGG | + | chr6.2:56315236-56315255 | None:intergenic | 65.0% | |
| GTCGGCCAGTTGGCTGACGA+AGG | - | chr6.2:56315499-56315518 | MS.gene38639:intron | 65.0% | |
| !! | CCGAGGTCCATCGGTGCCAT+TGG | - | chr6.2:56316213-56316232 | MS.gene38639:intron | 65.0% |
| CGCGTCACCTCCTCCTGAGG+TGG | + | chr6.2:56315233-56315252 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 56314428 | 56318274 | 56314428 | ID=MS.gene38639 |
| chr6.2 | mRNA | 56314428 | 56318274 | 56314428 | ID=MS.gene38639.t1;Parent=MS.gene38639 |
| chr6.2 | exon | 56316837 | 56318274 | 56316837 | ID=MS.gene38639.t1.exon1;Parent=MS.gene38639.t1 |
| chr6.2 | CDS | 56316837 | 56318274 | 56316837 | ID=cds.MS.gene38639.t1;Parent=MS.gene38639.t1 |
| chr6.2 | exon | 56315936 | 56316166 | 56315936 | ID=MS.gene38639.t1.exon2;Parent=MS.gene38639.t1 |
| chr6.2 | CDS | 56315936 | 56316166 | 56315936 | ID=cds.MS.gene38639.t1;Parent=MS.gene38639.t1 |
| chr6.2 | exon | 56314428 | 56314516 | 56314428 | ID=MS.gene38639.t1.exon3;Parent=MS.gene38639.t1 |
| chr6.2 | CDS | 56314428 | 56314516 | 56314428 | ID=cds.MS.gene38639.t1;Parent=MS.gene38639.t1 |
| Gene Sequence |
| Protein sequence |
