Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38770.t1 | XP_003625020.2 | 95.6 | 617 | 25 | 1 | 1 | 617 | 10 | 624 | 0.00E+00 | 1199.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38770.t1 | F4HVY0 | 57.9 | 620 | 252 | 3 | 1 | 611 | 1 | 620 | 1.9e-216 | 753.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38770.t1 | G7KRL9 | 95.6 | 617 | 25 | 1 | 1 | 617 | 1 | 615 | 0.0e+00 | 1199.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052698 | MS.gene38770 | 0.800902 | 1.16E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38770.t1 | MTR_7g090100 | 95.624 | 617 | 25 | 1 | 1 | 617 | 1 | 615 | 0.0 | 1209 |
| MS.gene38770.t1 | MTR_7g090120 | 88.979 | 617 | 68 | 0 | 1 | 617 | 1 | 617 | 0.0 | 1127 |
| MS.gene38770.t1 | MTR_7g090140 | 88.169 | 617 | 71 | 2 | 1 | 617 | 1 | 615 | 0.0 | 1113 |
| MS.gene38770.t1 | MTR_4g054290 | 82.516 | 612 | 107 | 0 | 1 | 612 | 1 | 612 | 0.0 | 1039 |
| MS.gene38770.t1 | MTR_4g054150 | 79.248 | 612 | 106 | 1 | 1 | 612 | 1 | 591 | 0.0 | 990 |
| MS.gene38770.t1 | MTR_7g090140 | 88.697 | 522 | 57 | 2 | 96 | 617 | 1 | 520 | 0.0 | 936 |
| MS.gene38770.t1 | MTR_8g009560 | 66.234 | 616 | 204 | 2 | 1 | 612 | 1 | 616 | 0.0 | 825 |
| MS.gene38770.t1 | MTR_8g009590 | 62.825 | 616 | 224 | 3 | 1 | 611 | 37 | 652 | 0.0 | 810 |
| MS.gene38770.t1 | MTR_4g129630 | 31.891 | 624 | 405 | 6 | 8 | 613 | 5 | 626 | 5.81e-116 | 359 |
| MS.gene38770.t1 | MTR_4g054320 | 84.615 | 52 | 8 | 0 | 561 | 612 | 43 | 94 | 1.05e-25 | 101 |
| MS.gene38770.t1 | MTR_8g009550 | 62.162 | 74 | 25 | 1 | 170 | 243 | 17 | 87 | 8.57e-24 | 95.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38770.t1 | AT1G02205 | 58.548 | 620 | 248 | 3 | 1 | 611 | 1 | 620 | 0.0 | 749 |
| MS.gene38770.t1 | AT1G02205 | 58.240 | 625 | 247 | 3 | 1 | 611 | 1 | 625 | 0.0 | 746 |
| MS.gene38770.t1 | AT1G02205 | 57.737 | 601 | 245 | 3 | 20 | 611 | 21 | 621 | 0.0 | 712 |
| MS.gene38770.t1 | AT1G02190 | 56.891 | 624 | 254 | 7 | 1 | 611 | 1 | 622 | 0.0 | 704 |
| MS.gene38770.t1 | AT2G37700 | 56.494 | 616 | 262 | 4 | 1 | 611 | 1 | 615 | 0.0 | 696 |
| MS.gene38770.t1 | AT1G02190 | 56.571 | 624 | 252 | 8 | 1 | 611 | 1 | 618 | 0.0 | 696 |
| MS.gene38770.t1 | AT2G37700 | 56.169 | 616 | 255 | 5 | 1 | 611 | 1 | 606 | 0.0 | 687 |
| MS.gene38770.t1 | AT2G37700 | 52.760 | 616 | 248 | 5 | 1 | 611 | 1 | 578 | 0.0 | 630 |
| MS.gene38770.t1 | AT2G37700 | 57.082 | 473 | 201 | 2 | 1 | 472 | 1 | 472 | 0.0 | 541 |
| MS.gene38770.t1 | AT1G02205 | 54.788 | 449 | 197 | 2 | 169 | 611 | 8 | 456 | 8.01e-179 | 514 |
| MS.gene38770.t1 | AT1G02205 | 52.674 | 374 | 171 | 2 | 244 | 611 | 8 | 381 | 1.46e-142 | 419 |
| MS.gene38770.t1 | AT5G57800 | 33.863 | 629 | 396 | 10 | 8 | 617 | 5 | 632 | 2.52e-114 | 355 |
Find 121 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAATGTATGACTACATTTA+TGG | 0.163251 | 7.1:-17244382 | MS.gene38770:CDS |
| TGCTTAGCACTGAGAAAGTA+TGG | 0.261801 | 7.1:-17241061 | MS.gene38770:CDS |
| GCCTAAACGTAATTGATAAA+TGG | 0.272397 | 7.1:+17244258 | None:intergenic |
| TTTGTGAGAATATTCTTTAA+AGG | 0.280734 | 7.1:+17241011 | None:intergenic |
| AAGTAAGAGAGGAGTTTCTT+AGG | 0.281109 | 7.1:+17244709 | None:intergenic |
| CATGCACTCATTACTCTTCT+TGG | 0.283707 | 7.1:+17241146 | None:intergenic |
| CTTGATTGAAGAAACAATTA+TGG | 0.293400 | 7.1:-17243818 | MS.gene38770:CDS |
| CACTGCATCACACCAAATTC+AGG | 0.293513 | 7.1:-17244426 | MS.gene38770:CDS |
| TTTGGAGGGAAATGAGAAAA+TGG | 0.296760 | 7.1:+17241363 | None:intergenic |
| CCAACCCTCAAACATCTAAA+TGG | 0.304289 | 7.1:-17244219 | MS.gene38770:CDS |
| GAATGCTACACAACCAGATT+TGG | 0.313054 | 7.1:-17245872 | MS.gene38770:CDS |
| ATGAACATTCCATCCTTCTA+AGG | 0.317589 | 7.1:+17241100 | None:intergenic |
| TCTTCAGTGGCTGCACTATA+TGG | 0.317805 | 7.1:-17244790 | MS.gene38770:CDS |
| TGAGTAATTAGCCCTGAATT+TGG | 0.335495 | 7.1:+17244414 | None:intergenic |
| AGCACTTGATTTGTCTCTTT+AGG | 0.336516 | 7.1:+17242619 | None:intergenic |
| TGCTTATGACTTGGATTTGT+GGG | 0.344010 | 7.1:-17244159 | MS.gene38770:CDS |
| GGAGCAAAGGTGATAAGTTT+AGG | 0.355246 | 7.1:-17243781 | MS.gene38770:CDS |
| TATCGACTTGTTCGAATTCA+AGG | 0.358353 | 7.1:+17245793 | None:intergenic |
| GGAAATATAGCTTGGTAGAC+TGG | 0.360650 | 7.1:+17245909 | None:intergenic |
| AGCATTCTGATCAACATAAA+AGG | 0.365500 | 7.1:+17245888 | None:intergenic |
| GCAGGTGGCTGTATTATATA+AGG | 0.367330 | 7.1:-17241765 | MS.gene38770:intron |
| ACTGCATTACTATATTATAT+AGG | 0.367550 | 7.1:-17245619 | MS.gene38770:CDS |
| GGAATAATTCATGCCTTAGA+AGG | 0.384364 | 7.1:-17241113 | MS.gene38770:CDS |
| TCCATTTATCAATTACGTTT+AGG | 0.386289 | 7.1:-17244259 | MS.gene38770:CDS |
| ATTATGGAGGCTGAGTTAAA+TGG | 0.386727 | 7.1:-17243802 | MS.gene38770:CDS |
| TCTTCGAGGCAAGTTCAATA+AGG | 0.388690 | 7.1:-17242596 | MS.gene38770:CDS |
| GAAACCTCTGGGGAGCTTCA+AGG | 0.397370 | 7.1:-17246215 | MS.gene38770:intron |
| GTCTGTAAGGATGCCTGGTT+TGG | 0.397427 | 7.1:+17246246 | None:intergenic |
| CTCTTTCATATGGGGTGAAA+GGG | 0.398310 | 7.1:-17245934 | MS.gene38770:CDS |
| GCATCCTTACAGACTGGCCT+TGG | 0.407256 | 7.1:-17246237 | MS.gene38770:CDS |
| ATAGCATATACTCTTTCATA+TGG | 0.411100 | 7.1:-17245944 | MS.gene38770:CDS |
| AAAAGCAAGATTGTTGATAA+AGG | 0.411329 | 7.1:-17245816 | MS.gene38770:CDS |
| TTGTAGCTTAAGATCATTGA+AGG | 0.414295 | 7.1:+17244111 | None:intergenic |
| TGTGAATTCATGAATGTAGT+AGG | 0.418846 | 7.1:+17241291 | None:intergenic |
| ACCACATCTGGTGACTCCTT+TGG | 0.419685 | 7.1:+17244310 | None:intergenic |
| GTATGAGAGATACTTCAAAA+TGG | 0.422668 | 7.1:+17244684 | None:intergenic |
| GTGAAATAGAAATCCAAATC+TGG | 0.423701 | 7.1:+17245859 | None:intergenic |
| AAAGAGTTCATACAAGTGAT+AGG | 0.424171 | 7.1:+17245415 | None:intergenic |
| TCTCCACCATGGTAAGTTAG+AGG | 0.426273 | 7.1:+17245576 | None:intergenic |
| ATGAGTGCATGGCGTATTGC+TGG | 0.430094 | 7.1:-17241134 | MS.gene38770:CDS |
| AAGTTTAGGACTTCTAAATC+AGG | 0.430707 | 7.1:-17243767 | MS.gene38770:intron |
| TATGACAAATGCTCGGCAAA+TGG | 0.431071 | 7.1:+17244862 | None:intergenic |
| TTGAAGATAAAAGTTGTAGA+TGG | 0.435173 | 7.1:-17242679 | MS.gene38770:CDS |
| TCACGTTACCAAACTGCTAA+AGG | 0.436168 | 7.1:-17245840 | MS.gene38770:CDS |
| ATGATCTTAAGCTACAAAGT+TGG | 0.442074 | 7.1:-17244105 | MS.gene38770:CDS |
| TGGGAAGCAAGTATTCGTTA+TGG | 0.446913 | 7.1:-17241041 | MS.gene38770:CDS |
| AGCATAGAGAACATTGTAAA+GGG | 0.447415 | 7.1:+17244178 | None:intergenic |
| GATACCATTTAGATGTTTGA+GGG | 0.449852 | 7.1:+17244215 | None:intergenic |
| TAGCATATACTCTTTCATAT+GGG | 0.452930 | 7.1:-17245943 | MS.gene38770:CDS |
| CATAATATGGCTTCCAAACC+AGG | 0.454942 | 7.1:-17246259 | None:intergenic |
| TATGAGAGATACTTCAAAAT+GGG | 0.456294 | 7.1:+17244685 | None:intergenic |
| TATGGTTAGTTGGAGATGAA+TGG | 0.456856 | 7.1:-17241431 | MS.gene38770:CDS |
| ATGCTTATGACTTGGATTTG+TGG | 0.457920 | 7.1:-17244160 | MS.gene38770:CDS |
| TGTGTTAAGTGCACCACATC+TGG | 0.460275 | 7.1:+17244298 | None:intergenic |
| GTTTCCAAGGCCAGTCTGTA+AGG | 0.467818 | 7.1:+17246233 | None:intergenic |
| GTAGTAGGAGTAATCATTGC+TGG | 0.470094 | 7.1:+17241306 | None:intergenic |
| GGTGTTGCTTTCTAAAACAA+AGG | 0.470122 | 7.1:+17244132 | None:intergenic |
| GGCCAGTCTGTAAGGATGCC+TGG | 0.476832 | 7.1:+17246241 | None:intergenic |
| TCAACCTTTGGAGTATTGAT+TGG | 0.477115 | 7.1:+17241683 | None:intergenic |
| ATCTAAAAGATATGGTTAGT+TGG | 0.480880 | 7.1:-17241441 | MS.gene38770:intron |
| AGATACCATTTAGATGTTTG+AGG | 0.483611 | 7.1:+17244214 | None:intergenic |
| AGACTGGCCTTGGAAACCTC+TGG | 0.487844 | 7.1:-17246227 | MS.gene38770:CDS |
| GACTGGCCTTGGAAACCTCT+GGG | 0.488240 | 7.1:-17246226 | MS.gene38770:CDS |
| ACTCTTTCATATGGGGTGAA+AGG | 0.491070 | 7.1:-17245935 | MS.gene38770:CDS |
| CCATTTAGATGTTTGAGGGT+TGG | 0.492002 | 7.1:+17244219 | None:intergenic |
| ATGGGATGAATATGAGCAAA+TGG | 0.495092 | 7.1:-17241412 | MS.gene38770:CDS |
| AGGATACATGATATTTCCTA+TGG | 0.497955 | 7.1:-17245599 | MS.gene38770:CDS |
| AAGCATAGAGAACATTGTAA+AGG | 0.498475 | 7.1:+17244177 | None:intergenic |
| ATGGTTAGTTGGAGATGAAT+GGG | 0.501106 | 7.1:-17241430 | MS.gene38770:CDS |
| TGTTCTCTATGCTTATGACT+TGG | 0.508587 | 7.1:-17244168 | MS.gene38770:CDS |
| CATTGATTTCATGAACAACA+TGG | 0.515742 | 7.1:-17244755 | MS.gene38770:CDS |
| GGTATGAACAATGATCCTTT+CGG | 0.516935 | 7.1:+17241384 | None:intergenic |
| TAATCATTGCTGGTGTATAG+TGG | 0.518061 | 7.1:+17241316 | None:intergenic |
| ACGAACAATGTTGTCAACAT+TGG | 0.521449 | 7.1:+17244820 | None:intergenic |
| ACAAATCAAGTGCTTCTTCG+AGG | 0.524077 | 7.1:-17242610 | MS.gene38770:CDS |
| GCTTATAGATCTTAGACAAA+GGG | 0.537060 | 7.1:-17241738 | MS.gene38770:CDS |
| AGCTTATAGATCTTAGACAA+AGG | 0.539004 | 7.1:-17241739 | MS.gene38770:CDS |
| ACTGTGAACATTATATTCAA+AGG | 0.541828 | 7.1:-17242711 | MS.gene38770:CDS |
| AAGTCGATAGAGAAACCAAT+TGG | 0.548372 | 7.1:-17245779 | MS.gene38770:intron |
| ACATAAAAGGAAATATAGCT+TGG | 0.556750 | 7.1:+17245901 | None:intergenic |
| CATCATGTCGAAAGAAAGCT+TGG | 0.558066 | 7.1:-17241714 | MS.gene38770:CDS |
| CTATGGCCTCTAACTTACCA+TGG | 0.558995 | 7.1:-17245582 | MS.gene38770:CDS |
| TAATTCATGCCTTAGAAGGA+TGG | 0.560259 | 7.1:-17241109 | MS.gene38770:CDS |
| ACTGCATCACACCAAATTCA+GGG | 0.564863 | 7.1:-17244425 | MS.gene38770:CDS |
| CTCCTTTGGTCTAATCAATG+AGG | 0.565009 | 7.1:+17244324 | None:intergenic |
| CTTACAGCAATATTGCATGC+TGG | 0.570938 | 7.1:-17245538 | MS.gene38770:CDS |
| GCTCAGTGACAATTGAAGAA+TGG | 0.571470 | 7.1:+17245437 | None:intergenic |
| GCTTAGCACTGAGAAAGTAT+GGG | 0.577653 | 7.1:-17241060 | MS.gene38770:CDS |
| GGCTGAGTTAAATGGAGCAA+AGG | 0.578535 | 7.1:-17243794 | MS.gene38770:CDS |
| TTCACCAATCAATACTCCAA+AGG | 0.582765 | 7.1:-17241687 | MS.gene38770:intron |
| TCTGCATAAAGCATTAGCAA+TGG | 0.584639 | 7.1:+17242564 | None:intergenic |
| CCATAAATGTAGTCATACAT+TGG | 0.586111 | 7.1:+17244382 | None:intergenic |
| CATGAATTCACACTCTTGTG+AGG | 0.587054 | 7.1:-17241280 | MS.gene38770:intron |
| AAGCTCCCCAGAGGTTTCCA+AGG | 0.587944 | 7.1:+17246220 | None:intergenic |
| ACCAAAGGAGTCACCAGATG+TGG | 0.589164 | 7.1:-17244311 | MS.gene38770:CDS |
| GGCTTCATATGTAGCATCTG+TGG | 0.589327 | 7.1:+17244345 | None:intergenic |
| AGCCTCATTGATTAGACCAA+AGG | 0.589348 | 7.1:-17244326 | MS.gene38770:CDS |
| CAAGAAGAGTAATGAGTGCA+TGG | 0.592300 | 7.1:-17241145 | MS.gene38770:CDS |
| ATTGATTTCATGAACAACAT+GGG | 0.593212 | 7.1:-17244754 | MS.gene38770:CDS |
| TGTAAAATATGACAAATGCT+CGG | 0.593397 | 7.1:+17244855 | None:intergenic |
| AACCAGGCATCCTTACAGAC+TGG | 0.594883 | 7.1:-17246243 | MS.gene38770:CDS |
| ATATGCTATGAGCAATCCAC+GGG | 0.601636 | 7.1:+17245958 | None:intergenic |
| AGCATATACTCTTTCATATG+GGG | 0.606631 | 7.1:-17245942 | MS.gene38770:CDS |
| GGATGGAATGTTCATGAATG+TGG | 0.610974 | 7.1:-17241092 | MS.gene38770:CDS |
| AGTTCGTGATTCTAAGCCCG+TGG | 0.612195 | 7.1:-17245974 | MS.gene38770:CDS |
| TTTAGGAATGTTGTTCAACA+CGG | 0.612745 | 7.1:+17242636 | None:intergenic |
| AATGGTATCTACATTTAATG+TGG | 0.614475 | 7.1:-17244201 | MS.gene38770:CDS |
| TCAAAATGGGAAAGTAAGAG+AGG | 0.615999 | 7.1:+17244698 | None:intergenic |
| TTACCATGGTGGAGAACAGA+TGG | 0.618214 | 7.1:-17245568 | MS.gene38770:CDS |
| TCAACACGGTTGCAGCAGCT+AGG | 0.626529 | 7.1:+17242650 | None:intergenic |
| GATTGAAGAAACAATTATGG+AGG | 0.627286 | 7.1:-17243815 | MS.gene38770:CDS |
| CATGGTAAGTTAGAGGCCAT+AGG | 0.634259 | 7.1:+17245583 | None:intergenic |
| TATATGCTATGAGCAATCCA+CGG | 0.638673 | 7.1:+17245957 | None:intergenic |
| AATATTGCATGCTGGACCAG+TGG | 0.640771 | 7.1:-17245530 | MS.gene38770:CDS |
| GAGCAAATGGAAGCACCGAA+AGG | 0.641337 | 7.1:-17241399 | MS.gene38770:CDS |
| TATACCAAGATTTAAAACAC+AGG | 0.658845 | 7.1:-17244080 | MS.gene38770:intron |
| ACACCATCTGTTCTCCACCA+TGG | 0.679185 | 7.1:+17245565 | None:intergenic |
| ACTGGCCTTGGAAACCTCTG+GGG | 0.699980 | 7.1:-17246225 | MS.gene38770:CDS |
| TGGCCTCTAACTTACCATGG+TGG | 0.709799 | 7.1:-17245579 | MS.gene38770:CDS |
| AGAACCTTGAAGCTCCCCAG+AGG | 0.725693 | 7.1:+17246211 | None:intergenic |
| ATGGTGGAGAACAGATGGTG+TGG | 0.733193 | 7.1:-17245563 | MS.gene38770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAATTAATTAACCATT+TGG | - | chr7.1:17245020-17245039 | MS.gene38770:intron | 10.0% |
| !! | AATTAATTAATTAACCATTT+GGG | - | chr7.1:17245021-17245040 | MS.gene38770:intron | 10.0% |
| !! | ATATTTACTAAATTAATAGA+AGG | + | chr7.1:17243533-17243552 | None:intergenic | 10.0% |
| !! | TATTTACTAAATTAATAGAA+GGG | + | chr7.1:17243532-17243551 | None:intergenic | 10.0% |
| !! | TGATTTATGTATATATATAT+TGG | - | chr7.1:17241888-17241907 | MS.gene38770:intron | 10.0% |
| !!! | AAAACATACAATTTTTTTTA+AGG | - | chr7.1:17245260-17245279 | MS.gene38770:intron | 10.0% |
| !!! | AACTTTTATATATATCTTTA+TGG | - | chr7.1:17244457-17244476 | MS.gene38770:intron | 10.0% |
| !!! | TTTTCTATTGTTTTTTTAAA+GGG | - | chr7.1:17243618-17243637 | MS.gene38770:intron | 10.0% |
| !!! | TTTTTCTATTGTTTTTTTAA+AGG | - | chr7.1:17243617-17243636 | MS.gene38770:intron | 10.0% |
| !! | AGATAAAGAGAAATATTTAA+AGG | + | chr7.1:17241529-17241548 | None:intergenic | 15.0% |
| !! | ATATAAAGTGAAATATATAG+TGG | + | chr7.1:17244839-17244858 | None:intergenic | 15.0% |
| !! | ATTAATTAATTAACCATTTG+GGG | - | chr7.1:17245022-17245041 | MS.gene38770:intron | 15.0% |
| !! | ATTTACTAAATTAATAGAAG+GGG | + | chr7.1:17243531-17243550 | None:intergenic | 15.0% |
| !! | CATTAAATATGAATACTTAA+GGG | + | chr7.1:17245190-17245209 | None:intergenic | 15.0% |
| !! | GATAAAGAGAAATATTTAAA+GGG | + | chr7.1:17241528-17241547 | None:intergenic | 15.0% |
| !! | TAAATAAACATTAGTTACTA+CGG | - | chr7.1:17244877-17244896 | MS.gene38770:intron | 15.0% |
| !! | TAGGTTTAGTAAATTAAATA+AGG | - | chr7.1:17241974-17241993 | MS.gene38770:intron | 15.0% |
| !! | TTAAAAAGTTAGTAATAAGA+AGG | + | chr7.1:17245134-17245153 | None:intergenic | 15.0% |
| !! | TTAAAGGGAAATAAAATATT+TGG | + | chr7.1:17241513-17241532 | None:intergenic | 15.0% |
| !! | TTGTATACTTAAACATAATT+TGG | + | chr7.1:17242100-17242119 | None:intergenic | 15.0% |
| !!! | AAAAATGTTGTTTATAAATG+TGG | - | chr7.1:17241946-17241965 | MS.gene38770:intron | 15.0% |
| !!! | ATGTATTTTTTAATGTCTAA+AGG | + | chr7.1:17242059-17242078 | None:intergenic | 15.0% |
| !! | AAAAAATTGTAAACTTACGA+TGG | + | chr7.1:17242605-17242624 | None:intergenic | 20.0% |
| !! | AAATTAATTGAGACCAAATT+TGG | + | chr7.1:17242333-17242352 | None:intergenic | 20.0% |
| !! | AAATTTGGTCTCAATTAATT+TGG | - | chr7.1:17242332-17242351 | MS.gene38770:intron | 20.0% |
| !! | ACTGCATTACTATATTATAT+AGG | - | chr7.1:17241641-17241660 | MS.gene38770:intron | 20.0% |
| !! | ATACTTAAACATAATTTGGA+TGG | + | chr7.1:17242096-17242115 | None:intergenic | 20.0% |
| !! | ATGTATTTATGTAACAGAAT+TGG | - | chr7.1:17246088-17246107 | MS.gene38770:intron | 20.0% |
| !! | GCATTAAATATGAATACTTA+AGG | + | chr7.1:17245191-17245210 | None:intergenic | 20.0% |
| !! | GTATATTTGATCATAAATTG+TGG | + | chr7.1:17242160-17242179 | None:intergenic | 20.0% |
| !! | TAAGTTTACAATGTTACTAT+TGG | - | chr7.1:17242632-17242651 | MS.gene38770:CDS | 20.0% |
| !! | TCATGATTATATAATCTGAA+CGG | - | chr7.1:17243986-17244005 | MS.gene38770:intron | 20.0% |
| !! | TTCAGATTTATCCTATTTAT+CGG | + | chr7.1:17244436-17244455 | None:intergenic | 20.0% |
| !! | TTTATCTCATCTAAAAGATA+TGG | - | chr7.1:17245811-17245830 | MS.gene38770:CDS | 20.0% |
| !! | TTTGAGAAATACTACAAAAT+AGG | + | chr7.1:17243398-17243417 | None:intergenic | 20.0% |
| !! | TTTGTGAGAATATTCTTTAA+AGG | + | chr7.1:17246252-17246271 | None:intergenic | 20.0% |
| !!! | ATTTTGTAGTATTTCTCAAA+AGG | - | chr7.1:17243398-17243417 | MS.gene38770:intron | 20.0% |
| !!! | TTGATTTGAATAACATTGAT+GGG | - | chr7.1:17244502-17244521 | MS.gene38770:intron | 20.0% |
| !!! | TTTGATTTGAATAACATTGA+TGG | - | chr7.1:17244501-17244520 | MS.gene38770:intron | 20.0% |
| !!! | TTTTGTAGTATTTCTCAAAA+GGG | - | chr7.1:17243399-17243418 | MS.gene38770:intron | 20.0% |
| !!! | TTTTTTGTGCTAAAATCTAT+CGG | + | chr7.1:17244363-17244382 | None:intergenic | 20.0% |
| ! | AAAAAAAGCCATTTGAATGA+TGG | - | chr7.1:17244147-17244166 | MS.gene38770:CDS | 25.0% |
| ! | AAAAATACGTTCCGATAAAT+AGG | - | chr7.1:17244422-17244441 | MS.gene38770:CDS | 25.0% |
| ! | AATATGATTAACTCAAGTAG+AGG | - | chr7.1:17245223-17245242 | MS.gene38770:intron | 25.0% |
| ! | AATGGTATCTACATTTAATG+TGG | - | chr7.1:17243059-17243078 | MS.gene38770:intron | 25.0% |
| ! | ACATAAAAGGAAATATAGCT+TGG | + | chr7.1:17241362-17241381 | None:intergenic | 25.0% |
| ! | ACTGTGAACATTATATTCAA+AGG | - | chr7.1:17244549-17244568 | MS.gene38770:intron | 25.0% |
| ! | ACTTTGTCTCATAATAAATG+TGG | + | chr7.1:17244965-17244984 | None:intergenic | 25.0% |
| ! | AGGGAAAATATTAGTATTGT+TGG | - | chr7.1:17243637-17243656 | MS.gene38770:intron | 25.0% |
| ! | AGTAATCATCAAAATCTCAT+GGG | - | chr7.1:17243873-17243892 | MS.gene38770:intron | 25.0% |
| ! | ATAGCATATACTCTTTCATA+TGG | - | chr7.1:17241316-17241335 | MS.gene38770:CDS | 25.0% |
| ! | ATCTAAAAGATATGGTTAGT+TGG | - | chr7.1:17245819-17245838 | MS.gene38770:CDS | 25.0% |
| ! | ATTCGGAAGTTATAATTGAT+TGG | + | chr7.1:17243810-17243829 | None:intergenic | 25.0% |
| ! | CTTGATTGAAGAAACAATTA+TGG | - | chr7.1:17243442-17243461 | MS.gene38770:intron | 25.0% |
| ! | GATTCCATAAAATTATCAAG+AGG | + | chr7.1:17245719-17245738 | None:intergenic | 25.0% |
| ! | GTAAATCACATTCAAAATTG+TGG | + | chr7.1:17242037-17242056 | None:intergenic | 25.0% |
| ! | GTTTATAAATGTGGTTAACT+AGG | - | chr7.1:17241955-17241974 | MS.gene38770:intron | 25.0% |
| ! | TAAAAAATTTGCATTCTCTG+TGG | - | chr7.1:17243325-17243344 | MS.gene38770:intron | 25.0% |
| ! | TAGCATATACTCTTTCATAT+GGG | - | chr7.1:17241317-17241336 | MS.gene38770:CDS | 25.0% |
| ! | TATAATAGGTACTATACTGA+AGG | + | chr7.1:17246030-17246049 | None:intergenic | 25.0% |
| ! | TATGAGAGATACTTCAAAAT+GGG | + | chr7.1:17242578-17242597 | None:intergenic | 25.0% |
| ! | TATTATGAGTCTAACATAAC+AGG | - | chr7.1:17245779-17245798 | MS.gene38770:intron | 25.0% |
| ! | TCCATTTATCAATTACGTTT+AGG | - | chr7.1:17243001-17243020 | MS.gene38770:intron | 25.0% |
| ! | TGGAATTCGAAGTAAAATAA+TGG | - | chr7.1:17244477-17244496 | MS.gene38770:intron | 25.0% |
| ! | TGGTTGGAAATAAAATCATT+CGG | + | chr7.1:17243827-17243846 | None:intergenic | 25.0% |
| ! | TGTAAAATATGACAAATGCT+CGG | + | chr7.1:17242408-17242427 | None:intergenic | 25.0% |
| ! | TTGAAGATAAAAGTTGTAGA+TGG | - | chr7.1:17244581-17244600 | MS.gene38770:intron | 25.0% |
| ! | TTTATGCAGAAAAAATGTAC+AGG | - | chr7.1:17244709-17244728 | MS.gene38770:CDS | 25.0% |
| !! | AAAAGCAAGATTGTTGATAA+AGG | - | chr7.1:17241444-17241463 | MS.gene38770:intron | 25.0% |
| !! | AATATTTGGAACTAACCAAT+TGG | + | chr7.1:17241499-17241518 | None:intergenic | 25.0% |
| !! | AATTTGCTCTCTGAAAAAAT+TGG | + | chr7.1:17245410-17245429 | None:intergenic | 25.0% |
| !! | ACAACTTTTATCTTCAATTG+TGG | + | chr7.1:17244578-17244597 | None:intergenic | 25.0% |
| !! | AGTAATGATCTTATTTGCTT+AGG | - | chr7.1:17244102-17244121 | MS.gene38770:CDS | 25.0% |
| !! | ATATATTTCGAGTCGATATT+TGG | + | chr7.1:17245362-17245381 | None:intergenic | 25.0% |
| !! | ATCTAAAATCACAAATGAGA+AGG | + | chr7.1:17243219-17243238 | None:intergenic | 25.0% |
| !! | ATTGATTTCATGAACAACAT+GGG | - | chr7.1:17242506-17242525 | MS.gene38770:intron | 25.0% |
| !! | CAACTTTTATCTTCAATTGT+GGG | + | chr7.1:17244577-17244596 | None:intergenic | 25.0% |
| !! | GTAATGATCTTATTTGCTTA+GGG | - | chr7.1:17244103-17244122 | MS.gene38770:CDS | 25.0% |
| !! | TAAAAACGGTCAAAGTTTTA+TGG | - | chr7.1:17245618-17245637 | MS.gene38770:CDS | 25.0% |
| !! | TAATGATCTTATTTGCTTAG+GGG | - | chr7.1:17244104-17244123 | MS.gene38770:CDS | 25.0% |
| !! | TATACCAAGATTTAAAACAC+AGG | - | chr7.1:17243180-17243199 | MS.gene38770:intron | 25.0% |
| !!! | AATACCTGTGTTTTAAATCT+TGG | + | chr7.1:17243187-17243206 | None:intergenic | 25.0% |
| !!! | AGACATTGATTCATCATTTA+AGG | + | chr7.1:17245741-17245760 | None:intergenic | 25.0% |
| !!! | ATTCAAATGGCTTTTTTTTC+GGG | + | chr7.1:17244145-17244164 | None:intergenic | 25.0% |
| !!! | CATTCAAATGGCTTTTTTTT+CGG | + | chr7.1:17244146-17244165 | None:intergenic | 25.0% |
| !!! | GATAGATTTTAGCACAAAAA+AGG | - | chr7.1:17244362-17244381 | MS.gene38770:CDS | 25.0% |
| !!! | GATTAATTGTGTTATTTGCA+TGG | - | chr7.1:17242213-17242232 | MS.gene38770:intron | 25.0% |
| !!! | TTTTTAACTGAATCAAGAGA+AGG | + | chr7.1:17243301-17243320 | None:intergenic | 25.0% |
| !!! | TTTTTTGATAAATTGCAAGC+AGG | - | chr7.1:17245477-17245496 | MS.gene38770:CDS | 25.0% |
| AAACCAAACGAGTATTTCAT+TGG | + | chr7.1:17243375-17243394 | None:intergenic | 30.0% | |
| AAAGAAAATGGATCAACCTT+TGG | + | chr7.1:17245592-17245611 | None:intergenic | 30.0% | |
| AAAGAGTTCATACAAGTGAT+AGG | + | chr7.1:17241848-17241867 | None:intergenic | 30.0% | |
| AAGCATAGAGAACATTGTAA+AGG | + | chr7.1:17243086-17243105 | None:intergenic | 30.0% | |
| AGATACCATTTAGATGTTTG+AGG | + | chr7.1:17243049-17243068 | None:intergenic | 30.0% | |
| AGCATAGAGAACATTGTAAA+GGG | + | chr7.1:17243085-17243104 | None:intergenic | 30.0% | |
| AGCATATACTCTTTCATATG+GGG | - | chr7.1:17241318-17241337 | MS.gene38770:CDS | 30.0% | |
| AGCATTCTGATCAACATAAA+AGG | + | chr7.1:17241375-17241394 | None:intergenic | 30.0% | |
| AGCTTATAGATCTTAGACAA+AGG | - | chr7.1:17245521-17245540 | MS.gene38770:CDS | 30.0% | |
| AGGATACATGATATTTCCTA+TGG | - | chr7.1:17241661-17241680 | MS.gene38770:intron | 30.0% | |
| ATGATCTTAAGCTACAAAGT+TGG | - | chr7.1:17243155-17243174 | MS.gene38770:intron | 30.0% | |
| ATGCTAATTTATTTGCTCCT+TGG | - | chr7.1:17242794-17242813 | MS.gene38770:intron | 30.0% | |
| CAATAGTATAAAAACTCCAC+TGG | + | chr7.1:17241749-17241768 | None:intergenic | 30.0% | |
| CAGATCTTAGAATCAGAATA+GGG | - | chr7.1:17244052-17244071 | MS.gene38770:intron | 30.0% | |
| CATATACTCTTGTCCAAATT+TGG | - | chr7.1:17242317-17242336 | MS.gene38770:intron | 30.0% | |
| CCAATGTATGACTACATTTA+TGG | - | chr7.1:17242878-17242897 | MS.gene38770:intron | 30.0% | |
| CCATAAATGTAGTCATACAT+TGG | + | chr7.1:17242881-17242900 | None:intergenic | 30.0% | |
| GAGTAATCATCAAAATCTCA+TGG | - | chr7.1:17243872-17243891 | MS.gene38770:intron | 30.0% | |
| GATACCATTTAGATGTTTGA+GGG | + | chr7.1:17243048-17243067 | None:intergenic | 30.0% | |
| GATTGAAGAAACAATTATGG+AGG | - | chr7.1:17243445-17243464 | MS.gene38770:intron | 30.0% | |
| GCCTAAACGTAATTGATAAA+TGG | + | chr7.1:17243005-17243024 | None:intergenic | 30.0% | |
| GCTTATAGATCTTAGACAAA+GGG | - | chr7.1:17245522-17245541 | MS.gene38770:CDS | 30.0% | |
| GGAGCAAATAAATTAGCATA+TGG | + | chr7.1:17242793-17242812 | None:intergenic | 30.0% | |
| GTATGAGAGATACTTCAAAA+TGG | + | chr7.1:17242579-17242598 | None:intergenic | 30.0% | |
| GTGAAATAGAAATCCAAATC+TGG | + | chr7.1:17241404-17241423 | None:intergenic | 30.0% | |
| GTTAGTAATAAGAAGGTTGA+TGG | + | chr7.1:17245127-17245146 | None:intergenic | 30.0% | |
| TAAAATCTATCGGATTCCAT+CGG | + | chr7.1:17244353-17244372 | None:intergenic | 30.0% | |
| TAAAATTATCAAGAGGTGGA+TGG | + | chr7.1:17245712-17245731 | None:intergenic | 30.0% | |
| TAATCATATTGAAGCATGTC+AGG | + | chr7.1:17245213-17245232 | None:intergenic | 30.0% | |
| TATGAGTGTTAGTTCATACT+AGG | - | chr7.1:17243581-17243600 | MS.gene38770:intron | 30.0% | |
| TCAGATCTTAGAATCAGAAT+AGG | - | chr7.1:17244051-17244070 | MS.gene38770:intron | 30.0% | |
| TCCATAAAATTATCAAGAGG+TGG | + | chr7.1:17245716-17245735 | None:intergenic | 30.0% | |
| TGTGAATTCATGAATGTAGT+AGG | + | chr7.1:17245972-17245991 | None:intergenic | 30.0% | |
| TTACCAATGAAATACTCGTT+TGG | - | chr7.1:17243369-17243388 | MS.gene38770:intron | 30.0% | |
| TTGTAGCTTAAGATCATTGA+AGG | + | chr7.1:17243152-17243171 | None:intergenic | 30.0% | |
| TTTAGCACAAAAAAGGCAAT+CGG | - | chr7.1:17244369-17244388 | MS.gene38770:CDS | 30.0% | |
| TTTAGGAATGTTGTTCAACA+CGG | + | chr7.1:17244627-17244646 | None:intergenic | 30.0% | |
| ! | AAGTTTAGGACTTCTAAATC+AGG | - | chr7.1:17243493-17243512 | MS.gene38770:intron | 30.0% |
| ! | AATGATCTTATTTGCTTAGG+GGG | - | chr7.1:17244105-17244124 | MS.gene38770:CDS | 30.0% |
| ! | ATTAATTAACCATTTGGGGT+TGG | - | chr7.1:17245026-17245045 | MS.gene38770:intron | 30.0% |
| ! | CAATCTTTTCGCATTTTCTT+TGG | + | chr7.1:17245918-17245937 | None:intergenic | 30.0% |
| ! | CAGTGGAGTTTTTATACTAT+TGG | - | chr7.1:17241747-17241766 | MS.gene38770:CDS | 30.0% |
| ! | TTAATTAACCATTTGGGGTT+GGG | - | chr7.1:17245027-17245046 | MS.gene38770:intron | 30.0% |
| !! | CATTGATTTCATGAACAACA+TGG | - | chr7.1:17242505-17242524 | MS.gene38770:intron | 30.0% |
| !! | TCCACCTCTTGATAATTTTA+TGG | - | chr7.1:17245712-17245731 | MS.gene38770:intron | 30.0% |
| !!! | TATTACACGTGATTTTTTGC+AGG | - | chr7.1:17245379-17245398 | MS.gene38770:intron | 30.0% |
| !!! | TGAAATGTTTTAACGTGTGT+TGG | + | chr7.1:17244034-17244053 | None:intergenic | 30.0% |
| AAAACATAGACATGCCAACT+AGG | + | chr7.1:17243264-17243283 | None:intergenic | 35.0% | |
| AAGTAAGAGAGGAGTTTCTT+AGG | + | chr7.1:17242554-17242573 | None:intergenic | 35.0% | |
| AAGTCGATAGAGAAACCAAT+TGG | - | chr7.1:17241481-17241500 | MS.gene38770:intron | 35.0% | |
| ACAACACATACAACACATCT+GGG | - | chr7.1:17244257-17244276 | MS.gene38770:CDS | 35.0% | |
| ACAAGCTGAGATTCAAACTT+TGG | + | chr7.1:17245090-17245109 | None:intergenic | 35.0% | |
| ACACACAAAAACAGTCGATT+AGG | + | chr7.1:17243782-17243801 | None:intergenic | 35.0% | |
| ACGAACAATGTTGTCAACAT+TGG | + | chr7.1:17242443-17242462 | None:intergenic | 35.0% | |
| AGTCAACATTGTATCTGATC+AGG | - | chr7.1:17243748-17243767 | MS.gene38770:intron | 35.0% | |
| ATGAACATTCCATCCTTCTA+AGG | + | chr7.1:17246163-17246182 | None:intergenic | 35.0% | |
| ATGGGATGAATATGAGCAAA+TGG | - | chr7.1:17245848-17245867 | MS.gene38770:CDS | 35.0% | |
| ATTAAATCTGGGTCACACAA+AGG | + | chr7.1:17244298-17244317 | None:intergenic | 35.0% | |
| ATTATGGAGGCTGAGTTAAA+TGG | - | chr7.1:17243458-17243477 | MS.gene38770:intron | 35.0% | |
| GATTCCATCGGAAAATACTT+GGG | + | chr7.1:17244341-17244360 | None:intergenic | 35.0% | |
| GGAATAATTCATGCCTTAGA+AGG | - | chr7.1:17246147-17246166 | MS.gene38770:intron | 35.0% | |
| GGTATGAACAATGATCCTTT+CGG | + | chr7.1:17245879-17245898 | None:intergenic | 35.0% | |
| GTCACCATGACATTAAATCT+GGG | + | chr7.1:17244309-17244328 | None:intergenic | 35.0% | |
| GTTCGTCAAAAAATCTTCAG+TGG | - | chr7.1:17242457-17242476 | MS.gene38770:intron | 35.0% | |
| TAATCATTGCTGGTGTATAG+TGG | + | chr7.1:17245947-17245966 | None:intergenic | 35.0% | |
| TAATTCATGCCTTAGAAGGA+TGG | - | chr7.1:17246151-17246170 | MS.gene38770:intron | 35.0% | |
| TATATGCTATGAGCAATCCA+CGG | + | chr7.1:17241306-17241325 | None:intergenic | 35.0% | |
| TCAAAATGGGAAAGTAAGAG+AGG | + | chr7.1:17242565-17242584 | None:intergenic | 35.0% | |
| TCTTTGTCTTTGATGTGACT+TGG | - | chr7.1:17241246-17241265 | MS.gene38770:intron | 35.0% | |
| TGAGTAATTAGCCCTGAATT+TGG | + | chr7.1:17242849-17242868 | None:intergenic | 35.0% | |
| TGTCACCATGACATTAAATC+TGG | + | chr7.1:17244310-17244329 | None:intergenic | 35.0% | |
| TGTTCTCTATGCTTATGACT+TGG | - | chr7.1:17243092-17243111 | MS.gene38770:intron | 35.0% | |
| TTCACCAATCAATACTCCAA+AGG | - | chr7.1:17245573-17245592 | MS.gene38770:CDS | 35.0% | |
| TTGATTGTGTGACATTTGCA+GGG | - | chr7.1:17241601-17241620 | MS.gene38770:intron | 35.0% | |
| TTTGATAAATTGCAAGCAGG+TGG | - | chr7.1:17245480-17245499 | MS.gene38770:CDS | 35.0% | |
| TTTGATTGTGTGACATTTGC+AGG | - | chr7.1:17241600-17241619 | MS.gene38770:intron | 35.0% | |
| TTTGGAGGGAAATGAGAAAA+TGG | + | chr7.1:17245900-17245919 | None:intergenic | 35.0% | |
| ! | AGCCATTTGAATGATGGAAT+CGG | - | chr7.1:17244153-17244172 | MS.gene38770:CDS | 35.0% |
| ! | ATGCTTATGACTTGGATTTG+TGG | - | chr7.1:17243100-17243119 | MS.gene38770:intron | 35.0% |
| ! | ATGGTTAGTTGGAGATGAAT+GGG | - | chr7.1:17245830-17245849 | MS.gene38770:CDS | 35.0% |
| ! | ATTTTGTTGACGCAATGCAT+AGG | + | chr7.1:17244782-17244801 | None:intergenic | 35.0% |
| ! | CTTTTCGCATTTTCTTTGGA+GGG | + | chr7.1:17245914-17245933 | None:intergenic | 35.0% |
| ! | GATCAGATACAATGTTGACT+TGG | + | chr7.1:17243748-17243767 | None:intergenic | 35.0% |
| ! | TATGGTTAGTTGGAGATGAA+TGG | - | chr7.1:17245829-17245848 | MS.gene38770:CDS | 35.0% |
| ! | TCTGCATAAAGCATTAGCAA+TGG | + | chr7.1:17244699-17244718 | None:intergenic | 35.0% |
| ! | TCTTTTCGCATTTTCTTTGG+AGG | + | chr7.1:17245915-17245934 | None:intergenic | 35.0% |
| ! | TGCTTATGACTTGGATTTGT+GGG | - | chr7.1:17243101-17243120 | MS.gene38770:intron | 35.0% |
| !! | AGCACTTGATTTGTCTCTTT+AGG | + | chr7.1:17244644-17244663 | None:intergenic | 35.0% |
| !! | CGGTCAAAGTTTTATGGATT+TGG | - | chr7.1:17245624-17245643 | MS.gene38770:CDS | 35.0% |
| !! | GGTGTTGCTTTCTAAAACAA+AGG | + | chr7.1:17243131-17243150 | None:intergenic | 35.0% |
| !! | TATCGACTTGTTCGAATTCA+AGG | + | chr7.1:17241470-17241489 | None:intergenic | 35.0% |
| !! | TCAACCTTTGGAGTATTGAT+TGG | + | chr7.1:17245580-17245599 | None:intergenic | 35.0% |
| !! | TCTTTGATGTGACTTGGTTA+TGG | - | chr7.1:17241252-17241271 | MS.gene38770:intron | 35.0% |
| !!! | AATGTTTTAACGTGTGTTGG+AGG | + | chr7.1:17244031-17244050 | None:intergenic | 35.0% |
| !!! | TGCTTTTTCCTTTAGCAGTT+TGG | + | chr7.1:17241431-17241450 | None:intergenic | 35.0% |
| AAAAAACTAATAGGGCCCCA+AGG | + | chr7.1:17243909-17243928 | None:intergenic | 40.0% | |
| ACAAATCAAGTGCTTCTTCG+AGG | - | chr7.1:17244650-17244669 | MS.gene38770:intron | 40.0% | |
| ACACCTCAAAATTGCTCACT+TGG | + | chr7.1:17243847-17243866 | None:intergenic | 40.0% | |
| ACTCTTTCATATGGGGTGAA+AGG | - | chr7.1:17241325-17241344 | MS.gene38770:CDS | 40.0% | |
| ACTGCATCACACCAAATTCA+GGG | - | chr7.1:17242835-17242854 | MS.gene38770:intron | 40.0% | |
| AGTGTTAGTTCATACTAGGC+TGG | - | chr7.1:17243585-17243604 | MS.gene38770:intron | 40.0% | |
| ATATGCTATGAGCAATCCAC+GGG | + | chr7.1:17241305-17241324 | None:intergenic | 40.0% | |
| CAAGAAGAGTAATGAGTGCA+TGG | - | chr7.1:17246115-17246134 | MS.gene38770:intron | 40.0% | |
| CACAACACATACAACACATC+TGG | - | chr7.1:17244256-17244275 | MS.gene38770:CDS | 40.0% | |
| CATCATGTCGAAAGAAAGCT+TGG | - | chr7.1:17245546-17245565 | MS.gene38770:CDS | 40.0% | |
| CATGAATTCACACTCTTGTG+AGG | - | chr7.1:17245980-17245999 | MS.gene38770:intron | 40.0% | |
| CATGCACTCATTACTCTTCT+TGG | + | chr7.1:17246117-17246136 | None:intergenic | 40.0% | |
| CCAACCCTCAAACATCTAAA+TGG | - | chr7.1:17243041-17243060 | MS.gene38770:intron | 40.0% | |
| CCATTTAGATGTTTGAGGGT+TGG | + | chr7.1:17243044-17243063 | None:intergenic | 40.0% | |
| CTCAAAATTGCTCACTTGGT+TGG | + | chr7.1:17243843-17243862 | None:intergenic | 40.0% | |
| CTCCTTTGGTCTAATCAATG+AGG | + | chr7.1:17242939-17242958 | None:intergenic | 40.0% | |
| CTCTTTCATATGGGGTGAAA+GGG | - | chr7.1:17241326-17241345 | MS.gene38770:CDS | 40.0% | |
| CTTACAGCAATATTGCATGC+TGG | - | chr7.1:17241722-17241741 | MS.gene38770:CDS | 40.0% | |
| GAATGCTACACAACCAGATT+TGG | - | chr7.1:17241388-17241407 | MS.gene38770:CDS | 40.0% | |
| GATGTGTTGTATGTGTTGTG+TGG | + | chr7.1:17244256-17244275 | None:intergenic | 40.0% | |
| GCAGGTGGCTGTATTATATA+AGG | - | chr7.1:17245495-17245514 | MS.gene38770:CDS | 40.0% | |
| GCTCAGTGACAATTGAAGAA+TGG | + | chr7.1:17241826-17241845 | None:intergenic | 40.0% | |
| GGAAATATAGCTTGGTAGAC+TGG | + | chr7.1:17241354-17241373 | None:intergenic | 40.0% | |
| GGAGCAAAGGTGATAAGTTT+AGG | - | chr7.1:17243479-17243498 | MS.gene38770:intron | 40.0% | |
| GGATGGAATGTTCATGAATG+TGG | - | chr7.1:17246168-17246187 | MS.gene38770:intron | 40.0% | |
| GGATTCCATCGGAAAATACT+TGG | + | chr7.1:17244342-17244361 | None:intergenic | 40.0% | |
| GTAGTAGGAGTAATCATTGC+TGG | + | chr7.1:17245957-17245976 | None:intergenic | 40.0% | |
| GTCACCGTGACATTAAATCT+GGG | - | chr7.1:17244197-17244216 | MS.gene38770:CDS | 40.0% | |
| GTGACCCAGATTTAATGTCA+TGG | - | chr7.1:17244302-17244321 | MS.gene38770:CDS | 40.0% | |
| TATGACAAATGCTCGGCAAA+TGG | + | chr7.1:17242401-17242420 | None:intergenic | 40.0% | |
| TCACGTTACCAAACTGCTAA+AGG | - | chr7.1:17241420-17241439 | MS.gene38770:CDS | 40.0% | |
| TCCCGATTCCATCATTCAAA+TGG | + | chr7.1:17244158-17244177 | None:intergenic | 40.0% | |
| TCTTCGAGGCAAGTTCAATA+AGG | - | chr7.1:17244664-17244683 | MS.gene38770:intron | 40.0% | |
| TGGATGGTGTGTTTAATGGT+GGG | + | chr7.1:17245696-17245715 | None:intergenic | 40.0% | |
| TGGGAAGCAAGTATTCGTTA+TGG | - | chr7.1:17246219-17246238 | MS.gene38770:CDS | 40.0% | |
| TGTCACCGTGACATTAAATC+TGG | - | chr7.1:17244196-17244215 | MS.gene38770:CDS | 40.0% | |
| ! | AGCCTCATTGATTAGACCAA+AGG | - | chr7.1:17242934-17242953 | MS.gene38770:intron | 40.0% |
| ! | CAACCAAGTGAGCAATTTTG+AGG | - | chr7.1:17243841-17243860 | MS.gene38770:CDS | 40.0% |
| ! | GCCATTTGAATGATGGAATC+GGG | - | chr7.1:17244154-17244173 | MS.gene38770:CDS | 40.0% |
| ! | GCTTAGCACTGAGAAAGTAT+GGG | - | chr7.1:17246200-17246219 | MS.gene38770:intron | 40.0% |
| ! | TGCTTAGCACTGAGAAAGTA+TGG | - | chr7.1:17246199-17246218 | MS.gene38770:intron | 40.0% |
| !! | CAGATACAATGTTGACTTGG+TGG | + | chr7.1:17243745-17243764 | None:intergenic | 40.0% |
| !! | CGTTGATTTGATGGCTAGAA+TGG | + | chr7.1:17245161-17245180 | None:intergenic | 40.0% |
| !! | GGGATACAACGTTGATTTGA+TGG | + | chr7.1:17245170-17245189 | None:intergenic | 40.0% |
| !! | TGTTGACTTGGTGGTTTAGA+TGG | + | chr7.1:17243736-17243755 | None:intergenic | 40.0% |
| AAGAGAAGGACATGCATCCA+GGG | + | chr7.1:17243287-17243306 | None:intergenic | 45.0% | |
| AATATTGCATGCTGGACCAG+TGG | - | chr7.1:17241730-17241749 | MS.gene38770:CDS | 45.0% | |
| AGGGCATGCGAGAAATTCAT+AGG | - | chr7.1:17244071-17244090 | MS.gene38770:intron | 45.0% | |
| CACATTGCCACACAACATCT+AGG | - | chr7.1:17244230-17244249 | MS.gene38770:CDS | 45.0% | |
| CACTGCATCACACCAAATTC+AGG | - | chr7.1:17242834-17242853 | MS.gene38770:intron | 45.0% | |
| CATGGTAAGTTAGAGGCCAT+AGG | + | chr7.1:17241680-17241699 | None:intergenic | 45.0% | |
| CTATGGCCTCTAACTTACCA+TGG | - | chr7.1:17241678-17241697 | MS.gene38770:intron | 45.0% | |
| GAGGTGGATGGTGTGTTTAA+TGG | + | chr7.1:17245700-17245719 | None:intergenic | 45.0% | |
| GGATGGTGTGTTTAATGGTG+GGG | + | chr7.1:17245695-17245714 | None:intergenic | 45.0% | |
| GGCTGAGTTAAATGGAGCAA+AGG | - | chr7.1:17243466-17243485 | MS.gene38770:intron | 45.0% | |
| GGCTTCATATGTAGCATCTG+TGG | + | chr7.1:17242918-17242937 | None:intergenic | 45.0% | |
| GGGCATGCGAGAAATTCATA+GGG | - | chr7.1:17244072-17244091 | MS.gene38770:intron | 45.0% | |
| GTGGATGGTGTGTTTAATGG+TGG | + | chr7.1:17245697-17245716 | None:intergenic | 45.0% | |
| GTGGCCCAGATTTAATGTCA+CGG | + | chr7.1:17244204-17244223 | None:intergenic | 45.0% | |
| TCTCCACCATGGTAAGTTAG+AGG | + | chr7.1:17241687-17241706 | None:intergenic | 45.0% | |
| TCTTCAGTGGCTGCACTATA+TGG | - | chr7.1:17242470-17242489 | MS.gene38770:intron | 45.0% | |
| TGTGTTAAGTGCACCACATC+TGG | + | chr7.1:17242965-17242984 | None:intergenic | 45.0% | |
| ! | CAAAATCTCATGGGCTAAGC+TGG | - | chr7.1:17243882-17243901 | MS.gene38770:intron | 45.0% |
| ! | GTCACCCAAGTATTTTCCGA+TGG | - | chr7.1:17244334-17244353 | MS.gene38770:CDS | 45.0% |
| ! | GTGTGTTGGAGGTTTTTACG+AGG | + | chr7.1:17244020-17244039 | None:intergenic | 45.0% |
| ! | TGGCATGTCTATGTTTTCCC+TGG | - | chr7.1:17243267-17243286 | MS.gene38770:intron | 45.0% |
| ! | TTACCATGGTGGAGAACAGA+TGG | - | chr7.1:17241692-17241711 | MS.gene38770:CDS | 45.0% |
| !! | AAAAATTAAAAAAAACTAAT+AGG | + | chr7.1:17243918-17243937 | None:intergenic | 5.0% |
| !! | AAAATTAAAAAAAACTAATA+GGG | + | chr7.1:17243917-17243936 | None:intergenic | 5.0% |
| !!! | ATTTTAATTTATGTTATAAT+AGG | + | chr7.1:17246044-17246063 | None:intergenic | 5.0% |
| !!! | TTTTCTTTTATTTTTAAAAA+CGG | - | chr7.1:17245604-17245623 | MS.gene38770:CDS | 5.0% |
| !!! | TTTTTAAAAATAAAAGAAAA+TGG | + | chr7.1:17245604-17245623 | None:intergenic | 5.0% |
| AACCAGGCATCCTTACAGAC+TGG | - | chr7.1:17241017-17241036 | MS.gene38770:CDS | 50.0% | |
| ACACCATCTGTTCTCCACCA+TGG | + | chr7.1:17241698-17241717 | None:intergenic | 50.0% | |
| ACCAAAGGAGTCACCAGATG+TGG | - | chr7.1:17242949-17242968 | MS.gene38770:intron | 50.0% | |
| ACCACATCTGGTGACTCCTT+TGG | + | chr7.1:17242953-17242972 | None:intergenic | 50.0% | |
| AGTGAAACCTGTGGATGCCA+AGG | + | chr7.1:17242814-17242833 | None:intergenic | 50.0% | |
| AGTTCGTGATTCTAAGCCCG+TGG | - | chr7.1:17241286-17241305 | MS.gene38770:CDS | 50.0% | |
| ATGAGTGCATGGCGTATTGC+TGG | - | chr7.1:17246126-17246145 | MS.gene38770:intron | 50.0% | |
| ATTTGCTCCTTGGCATCCAC+AGG | - | chr7.1:17242804-17242823 | MS.gene38770:intron | 50.0% | |
| CAAGAGAAGGACATGCATCC+AGG | + | chr7.1:17243288-17243307 | None:intergenic | 50.0% | |
| CCATGAAACCCAACCCCAAA+TGG | + | chr7.1:17245038-17245057 | None:intergenic | 50.0% | |
| CGCAAAAGTGACGACCTAGT+TGG | - | chr7.1:17243247-17243266 | MS.gene38770:intron | 50.0% | |
| GATGCAGTGAGTGAAACCTG+TGG | + | chr7.1:17242823-17242842 | None:intergenic | 50.0% | |
| GTCTGTAAGGATGCCTGGTT+TGG | + | chr7.1:17241017-17241036 | None:intergenic | 50.0% | |
| GTGTGGCAATGTGTGTTGTG+TGG | + | chr7.1:17244223-17244242 | None:intergenic | 50.0% | |
| GTTTCCAAGGCCAGTCTGTA+AGG | + | chr7.1:17241030-17241049 | None:intergenic | 50.0% | |
| TGGCCTCTAACTTACCATGG+TGG | - | chr7.1:17241681-17241700 | MS.gene38770:intron | 50.0% | |
| TGTGTGGCCTAGATGTTGTG+TGG | + | chr7.1:17244240-17244259 | None:intergenic | 50.0% | |
| ! | ATGGTGGAGAACAGATGGTG+TGG | - | chr7.1:17241697-17241716 | MS.gene38770:CDS | 50.0% |
| ! | CCATTTGGGGTTGGGTTTCA+TGG | - | chr7.1:17245035-17245054 | MS.gene38770:intron | 50.0% |
| !! | GAGCAAATGGAAGCACCGAA+AGG | - | chr7.1:17245861-17245880 | MS.gene38770:CDS | 50.0% |
| !! | GATGGAATCGGGAAGCACTT+GGG | - | chr7.1:17244165-17244184 | MS.gene38770:CDS | 50.0% |
| !! | TGATGGAATCGGGAAGCACT+TGG | - | chr7.1:17244164-17244183 | MS.gene38770:CDS | 50.0% |
| AAGCTCCCCAGAGGTTTCCA+AGG | + | chr7.1:17241043-17241062 | None:intergenic | 55.0% | |
| AGAACCTTGAAGCTCCCCAG+AGG | + | chr7.1:17241052-17241071 | None:intergenic | 55.0% | |
| TCAACACGGTTGCAGCAGCT+AGG | + | chr7.1:17244613-17244632 | None:intergenic | 55.0% | |
| ! | ATGGGCTAAGCTGGACCTTG+GGG | - | chr7.1:17243891-17243910 | MS.gene38770:intron | 55.0% |
| ! | CATGGGCTAAGCTGGACCTT+GGG | - | chr7.1:17243890-17243909 | MS.gene38770:intron | 55.0% |
| ! | GAAACCTCTGGGGAGCTTCA+AGG | - | chr7.1:17241045-17241064 | MS.gene38770:CDS | 55.0% |
| ! | TCATGGGCTAAGCTGGACCT+TGG | - | chr7.1:17243889-17243908 | MS.gene38770:intron | 55.0% |
| !! | ACTGGCCTTGGAAACCTCTG+GGG | - | chr7.1:17241035-17241054 | MS.gene38770:CDS | 55.0% |
| !! | AGACTGGCCTTGGAAACCTC+TGG | - | chr7.1:17241033-17241052 | MS.gene38770:CDS | 55.0% |
| !! | GACTGGCCTTGGAAACCTCT+GGG | - | chr7.1:17241034-17241053 | MS.gene38770:CDS | 55.0% |
| !! | GCATCCTTACAGACTGGCCT+TGG | - | chr7.1:17241023-17241042 | MS.gene38770:CDS | 55.0% |
| GGCCAGTCTGTAAGGATGCC+TGG | + | chr7.1:17241022-17241041 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 17241007 | 17246275 | 17241007 | ID=MS.gene38770 |
| chr7.1 | mRNA | 17241007 | 17246275 | 17241007 | ID=MS.gene38770.t1;Parent=MS.gene38770 |
| chr7.1 | exon | 17246216 | 17246275 | 17246216 | ID=MS.gene38770.t1.exon1;Parent=MS.gene38770.t1 |
| chr7.1 | CDS | 17246216 | 17246275 | 17246216 | ID=cds.MS.gene38770.t1;Parent=MS.gene38770.t1 |
| chr7.1 | exon | 17245780 | 17245994 | 17245780 | ID=MS.gene38770.t1.exon2;Parent=MS.gene38770.t1 |
| chr7.1 | CDS | 17245780 | 17245994 | 17245780 | ID=cds.MS.gene38770.t1;Parent=MS.gene38770.t1 |
| chr7.1 | exon | 17245428 | 17245660 | 17245428 | ID=MS.gene38770.t1.exon3;Parent=MS.gene38770.t1 |
| chr7.1 | CDS | 17245428 | 17245660 | 17245428 | ID=cds.MS.gene38770.t1;Parent=MS.gene38770.t1 |
| chr7.1 | exon | 17244676 | 17244895 | 17244676 | ID=MS.gene38770.t1.exon4;Parent=MS.gene38770.t1 |
| chr7.1 | CDS | 17244676 | 17244895 | 17244676 | ID=cds.MS.gene38770.t1;Parent=MS.gene38770.t1 |
| chr7.1 | exon | 17244081 | 17244456 | 17244081 | ID=MS.gene38770.t1.exon5;Parent=MS.gene38770.t1 |
| chr7.1 | CDS | 17244081 | 17244456 | 17244081 | ID=cds.MS.gene38770.t1;Parent=MS.gene38770.t1 |
| chr7.1 | exon | 17243768 | 17243875 | 17243768 | ID=MS.gene38770.t1.exon6;Parent=MS.gene38770.t1 |
| chr7.1 | CDS | 17243768 | 17243875 | 17243768 | ID=cds.MS.gene38770.t1;Parent=MS.gene38770.t1 |
| chr7.1 | exon | 17242552 | 17242752 | 17242552 | ID=MS.gene38770.t1.exon7;Parent=MS.gene38770.t1 |
| chr7.1 | CDS | 17242552 | 17242752 | 17242552 | ID=cds.MS.gene38770.t1;Parent=MS.gene38770.t1 |
| chr7.1 | exon | 17241688 | 17241783 | 17241688 | ID=MS.gene38770.t1.exon8;Parent=MS.gene38770.t1 |
| chr7.1 | CDS | 17241688 | 17241783 | 17241688 | ID=cds.MS.gene38770.t1;Parent=MS.gene38770.t1 |
| chr7.1 | exon | 17241281 | 17241454 | 17241281 | ID=MS.gene38770.t1.exon9;Parent=MS.gene38770.t1 |
| chr7.1 | CDS | 17241281 | 17241454 | 17241281 | ID=cds.MS.gene38770.t1;Parent=MS.gene38770.t1 |
| chr7.1 | exon | 17241007 | 17241177 | 17241007 | ID=MS.gene38770.t1.exon10;Parent=MS.gene38770.t1 |
| chr7.1 | CDS | 17241007 | 17241177 | 17241007 | ID=cds.MS.gene38770.t1;Parent=MS.gene38770.t1 |
| Gene Sequence |
| Protein sequence |
