Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38804.t1 | RHN47770.1 | 92.4 | 394 | 29 | 1 | 1 | 393 | 31 | 424 | 1.80E-214 | 755 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38804.t1 | Q9SLG8 | 53.8 | 338 | 137 | 9 | 55 | 384 | 48 | 374 | 8.0e-99 | 362.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38804.t1 | G7KRP1 | 92.4 | 394 | 29 | 1 | 1 | 393 | 1 | 394 | 1.3e-214 | 755.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058700 | MS.gene38804 | 0.821483 | 3.94E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38804.t1 | MTR_7g090320 | 93.909 | 394 | 23 | 1 | 1 | 393 | 1 | 394 | 0.0 | 768 |
| MS.gene38804.t1 | MTR_7g090310 | 91.371 | 394 | 32 | 2 | 1 | 393 | 1 | 393 | 0.0 | 746 |
| MS.gene38804.t1 | MTR_7g490350 | 47.432 | 331 | 162 | 4 | 55 | 385 | 50 | 368 | 1.36e-107 | 321 |
| MS.gene38804.t1 | MTR_7g090300 | 42.857 | 385 | 203 | 7 | 1 | 385 | 1 | 368 | 2.01e-103 | 310 |
| MS.gene38804.t1 | MTR_7g490330 | 45.455 | 330 | 130 | 4 | 56 | 385 | 45 | 324 | 1.36e-98 | 296 |
| MS.gene38804.t1 | MTR_2g087780 | 46.201 | 329 | 169 | 7 | 58 | 385 | 73 | 394 | 6.33e-94 | 287 |
| MS.gene38804.t1 | MTR_4g050190 | 45.427 | 328 | 170 | 8 | 58 | 384 | 70 | 389 | 3.49e-92 | 282 |
| MS.gene38804.t1 | MTR_5g091980 | 42.075 | 347 | 147 | 7 | 39 | 385 | 30 | 322 | 8.40e-86 | 264 |
| MS.gene38804.t1 | MTR_2g099030 | 37.190 | 363 | 200 | 7 | 26 | 376 | 50 | 396 | 4.27e-82 | 257 |
| MS.gene38804.t1 | MTR_4g112670 | 37.647 | 340 | 181 | 7 | 41 | 380 | 22 | 330 | 7.43e-67 | 215 |
| MS.gene38804.t1 | MTR_4g112630 | 37.764 | 331 | 160 | 7 | 57 | 384 | 37 | 324 | 2.72e-66 | 214 |
| MS.gene38804.t1 | MTR_2g058450 | 36.562 | 320 | 171 | 4 | 57 | 376 | 39 | 326 | 9.03e-65 | 210 |
| MS.gene38804.t1 | MTR_4g112650 | 37.690 | 329 | 170 | 8 | 58 | 384 | 38 | 333 | 4.74e-62 | 203 |
| MS.gene38804.t1 | MTR_4g112620 | 31.003 | 329 | 154 | 6 | 58 | 384 | 42 | 299 | 1.59e-43 | 154 |
| MS.gene38804.t1 | MTR_2g058410 | 36.078 | 255 | 135 | 4 | 128 | 381 | 1 | 228 | 4.73e-40 | 142 |
| MS.gene38804.t1 | MTR_8g074170 | 29.268 | 328 | 192 | 6 | 58 | 385 | 78 | 365 | 3.30e-36 | 136 |
| MS.gene38804.t1 | MTR_8g074270 | 29.268 | 328 | 192 | 6 | 58 | 385 | 78 | 365 | 1.06e-35 | 134 |
| MS.gene38804.t1 | MTR_0003s0530 | 36.275 | 204 | 106 | 2 | 173 | 376 | 2 | 181 | 4.18e-35 | 128 |
| MS.gene38804.t1 | MTR_8g074210 | 27.463 | 335 | 193 | 7 | 56 | 385 | 76 | 365 | 1.00e-33 | 129 |
| MS.gene38804.t1 | MTR_2g042420 | 27.062 | 388 | 234 | 12 | 5 | 384 | 1 | 347 | 1.90e-31 | 122 |
| MS.gene38804.t1 | MTR_2g042370 | 27.826 | 345 | 205 | 10 | 45 | 384 | 50 | 355 | 4.87e-31 | 121 |
| MS.gene38804.t1 | MTR_2g042430 | 27.666 | 347 | 200 | 11 | 45 | 383 | 62 | 365 | 3.35e-29 | 117 |
| MS.gene38804.t1 | MTR_4g112840 | 42.268 | 97 | 56 | 0 | 199 | 295 | 56 | 152 | 2.75e-22 | 93.2 |
| MS.gene38804.t1 | MTR_1g075865 | 37.755 | 98 | 61 | 0 | 184 | 281 | 13 | 110 | 6.77e-20 | 85.5 |
| MS.gene38804.t1 | MTR_8g074320 | 36.641 | 131 | 79 | 3 | 122 | 250 | 92 | 220 | 6.19e-18 | 82.4 |
| MS.gene38804.t1 | MTR_2g058430 | 38.372 | 86 | 52 | 1 | 113 | 198 | 46 | 130 | 3.39e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38804.t1 | AT2G41290 | 53.488 | 344 | 140 | 10 | 49 | 384 | 43 | 374 | 2.64e-122 | 359 |
| MS.gene38804.t1 | AT3G57030 | 44.675 | 385 | 195 | 6 | 7 | 385 | 1 | 373 | 1.97e-111 | 331 |
| MS.gene38804.t1 | AT1G08470 | 45.897 | 329 | 168 | 7 | 58 | 385 | 69 | 388 | 3.08e-93 | 285 |
| MS.gene38804.t1 | AT5G22020 | 45.593 | 329 | 169 | 7 | 58 | 385 | 75 | 394 | 3.63e-92 | 283 |
| MS.gene38804.t1 | AT5G22020 | 45.593 | 329 | 169 | 7 | 58 | 385 | 75 | 394 | 3.63e-92 | 283 |
| MS.gene38804.t1 | AT5G22020 | 45.593 | 329 | 169 | 7 | 58 | 385 | 75 | 394 | 3.63e-92 | 283 |
| MS.gene38804.t1 | AT3G59530 | 40.000 | 325 | 168 | 7 | 58 | 376 | 84 | 387 | 3.85e-79 | 249 |
| MS.gene38804.t1 | AT3G59530 | 40.000 | 325 | 168 | 7 | 58 | 376 | 84 | 387 | 3.85e-79 | 249 |
| MS.gene38804.t1 | AT3G59530 | 40.000 | 325 | 168 | 7 | 58 | 376 | 84 | 387 | 3.85e-79 | 249 |
| MS.gene38804.t1 | AT3G57010 | 37.371 | 388 | 219 | 8 | 7 | 392 | 11 | 376 | 3.96e-79 | 248 |
| MS.gene38804.t1 | AT3G57020 | 37.666 | 377 | 206 | 10 | 10 | 381 | 12 | 364 | 7.52e-79 | 248 |
| MS.gene38804.t1 | AT2G41300 | 40.312 | 320 | 176 | 6 | 63 | 381 | 83 | 388 | 3.45e-77 | 244 |
| MS.gene38804.t1 | AT3G57020 | 36.340 | 377 | 197 | 10 | 10 | 381 | 12 | 350 | 1.13e-73 | 234 |
| MS.gene38804.t1 | AT1G74010 | 37.237 | 333 | 165 | 10 | 50 | 380 | 29 | 319 | 1.39e-57 | 191 |
| MS.gene38804.t1 | AT1G74000 | 35.629 | 334 | 170 | 8 | 50 | 380 | 32 | 323 | 1.77e-55 | 186 |
| MS.gene38804.t1 | AT1G74020 | 34.639 | 332 | 176 | 7 | 50 | 380 | 30 | 321 | 4.45e-55 | 185 |
| MS.gene38804.t1 | AT3G51430 | 34.392 | 189 | 117 | 5 | 125 | 312 | 113 | 295 | 1.26e-25 | 107 |
| MS.gene38804.t1 | AT3G51420 | 29.565 | 230 | 150 | 7 | 125 | 353 | 113 | 331 | 1.92e-25 | 106 |
| MS.gene38804.t1 | AT3G51440 | 33.161 | 193 | 122 | 5 | 125 | 316 | 113 | 299 | 4.15e-25 | 105 |
| MS.gene38804.t1 | AT3G51430 | 33.862 | 189 | 116 | 6 | 125 | 312 | 113 | 293 | 2.99e-24 | 103 |
| MS.gene38804.t1 | AT3G51450 | 27.157 | 313 | 191 | 11 | 11 | 317 | 19 | 300 | 6.19e-24 | 102 |
Find 104 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGAAAGAGATGGAGTATTA+TGG | 0.214695 | 7.1:-16902060 | MS.gene38804:CDS |
| CCACATATGTGTTCTTTCTT+TGG | 0.231810 | 7.1:+16903544 | None:intergenic |
| ACTTCCAATGTTCCAGCTTT+AGG | 0.237744 | 7.1:+16902367 | None:intergenic |
| CCTTCGGAGTTTCCGATGTT+TGG | 0.289970 | 7.1:-16906048 | MS.gene38804:CDS |
| GGAGTCCAAGAGGAGGGTTT+TGG | 0.319896 | 7.1:-16902306 | MS.gene38804:CDS |
| TTCTTTGGATGCTCCTTGTA+TGG | 0.320582 | 7.1:+16903559 | None:intergenic |
| CTACAAAATGTAGAATATTA+AGG | 0.335376 | 7.1:-16902405 | MS.gene38804:CDS |
| GGAAAGAGATGGAGTATTAT+GGG | 0.336513 | 7.1:-16902059 | MS.gene38804:CDS |
| GGAGTACTGGATTGGCAATT+AGG | 0.337863 | 7.1:-16902159 | MS.gene38804:CDS |
| AATGTAGAATATTAAGGTAT+TGG | 0.356659 | 7.1:-16902399 | MS.gene38804:CDS |
| TTTGGCTTTCACAAACAGTT+TGG | 0.368869 | 7.1:-16903386 | MS.gene38804:CDS |
| CACATATGTGGGCGCCCACT+TGG | 0.369191 | 7.1:-16903532 | MS.gene38804:CDS |
| CACGGTGAAGGACCTTATAC+TGG | 0.415839 | 7.1:-16905959 | MS.gene38804:CDS |
| CCATCGGAAACTCCAGTATA+AGG | 0.420556 | 7.1:+16905947 | None:intergenic |
| AAATATCCTTGGATAGGAAA+AGG | 0.423941 | 7.1:-16902238 | MS.gene38804:CDS |
| TTGGATATTGATCAACGAAC+TGG | 0.446101 | 7.1:-16903367 | MS.gene38804:CDS |
| TCTCTCATATTTAGAACTGC+TGG | 0.447647 | 7.1:+16903327 | None:intergenic |
| TGATGTTTCTGTGACATCCT+TGG | 0.456615 | 7.1:+16906072 | None:intergenic |
| AACAATCTCACATTTGCAAA+TGG | 0.458350 | 7.1:-16902472 | MS.gene38804:CDS |
| TGCAGCAGAAGAACAACCTT+TGG | 0.462301 | 7.1:-16903404 | MS.gene38804:CDS |
| TTGTGCTTCAACGTAGCATC+TGG | 0.463806 | 7.1:-16903508 | MS.gene38804:CDS |
| CATATTTGGCTAAGGTGAAA+GGG | 0.464547 | 7.1:-16902180 | MS.gene38804:CDS |
| AACACCTAAAGCTGGAACAT+TGG | 0.466304 | 7.1:-16902371 | MS.gene38804:CDS |
| ATCATAGAAGTGGTAATAGA+AGG | 0.466599 | 7.1:-16902099 | MS.gene38804:CDS |
| AATGGATGCTAAAATATCCT+TGG | 0.469758 | 7.1:-16902249 | MS.gene38804:CDS |
| AACTTATTCATATTTGGCTA+AGG | 0.473266 | 7.1:-16902188 | MS.gene38804:CDS |
| TGAATACGGCGCCGTTGGAC+CGG | 0.480181 | 7.1:-16906002 | MS.gene38804:CDS |
| TACTTGTCTTTGATCCTAAG+TGG | 0.481110 | 7.1:-16902556 | MS.gene38804:CDS |
| TTATGTTGCTGACGCATACA+TGG | 0.486166 | 7.1:-16903479 | MS.gene38804:CDS |
| TCATATTTGGCTAAGGTGAA+AGG | 0.488191 | 7.1:-16902181 | MS.gene38804:CDS |
| TTGTTATACTTAATAACAAA+AGG | 0.490638 | 7.1:+16902019 | None:intergenic |
| AGTGAGGTTGAGGAAAGAGA+TGG | 0.492716 | 7.1:-16902070 | MS.gene38804:CDS |
| CCAACCCAAAACCCTCCTCT+TGG | 0.502263 | 7.1:+16902301 | None:intergenic |
| TCCTTCACCGTGAGGGTCGA+AGG | 0.502621 | 7.1:+16905970 | None:intergenic |
| AATATCCTTGGATAGGAAAA+GGG | 0.503384 | 7.1:-16902237 | MS.gene38804:CDS |
| GCTAAGGTGAAAGGGAGTAC+TGG | 0.506609 | 7.1:-16902172 | MS.gene38804:CDS |
| CCGATTGAATACGGCGCCGT+TGG | 0.512132 | 7.1:-16906007 | MS.gene38804:CDS |
| GCACCTTACGGCGGCTGTCG+TGG | 0.513010 | 7.1:-16906143 | MS.gene38804:CDS |
| AATATGATTCCGATTGAATA+CGG | 0.514073 | 7.1:-16906016 | MS.gene38804:CDS |
| CCGATGGACATATCATCAAA+TGG | 0.514459 | 7.1:-16905931 | MS.gene38804:CDS |
| GCCTTCGACCCTCACGGTGA+AGG | 0.515139 | 7.1:-16905971 | MS.gene38804:CDS |
| GGGTCGAAGGCAAAACTCTC+CGG | 0.516696 | 7.1:+16905983 | None:intergenic |
| CTAGTTGTTATTGAGCCCAC+TGG | 0.517702 | 7.1:-16903454 | MS.gene38804:CDS |
| GGCACCGTCATCAGAACCGT+TGG | 0.520639 | 7.1:-16905910 | MS.gene38804:CDS |
| CCAACGGCGCCGTATTCAAT+CGG | 0.522160 | 7.1:+16906007 | None:intergenic |
| AAGGTCTATTAGTGAGGTTG+AGG | 0.522210 | 7.1:-16902080 | MS.gene38804:CDS |
| AGAGATGGAGTATTATGGGT+TGG | 0.527512 | 7.1:-16902055 | MS.gene38804:CDS |
| CTGCCACGACAGCCGCCGTA+AGG | 0.527552 | 7.1:+16906140 | None:intergenic |
| GAAGTCTTTGCTAATCTACC+AGG | 0.529415 | 7.1:-16902349 | MS.gene38804:CDS |
| ATGCTAAAATATCCTTGGAT+AGG | 0.532866 | 7.1:-16902244 | MS.gene38804:CDS |
| ACATATGTGGGCGCCCACTT+GGG | 0.533191 | 7.1:-16903531 | MS.gene38804:CDS |
| GTCACAGAAACATCAACCTT+CGG | 0.533655 | 7.1:-16906064 | MS.gene38804:CDS |
| ATCCTAAGTGGTGACAACTC+AGG | 0.535623 | 7.1:-16902544 | MS.gene38804:CDS |
| TTTATGTTGTCGGGAAAACC+TGG | 0.539609 | 7.1:+16902331 | None:intergenic |
| CCAAAGAAAGAACACATATG+TGG | 0.541865 | 7.1:-16903544 | MS.gene38804:CDS |
| GGCAAAACTCTCCGGTCCAA+CGG | 0.542787 | 7.1:+16905991 | None:intergenic |
| TCCTAAGTGGTGACAACTCA+GGG | 0.544685 | 7.1:-16902543 | MS.gene38804:CDS |
| GGCAATTAGGCTAAGTGAGG+AGG | 0.546325 | 7.1:-16902146 | MS.gene38804:CDS |
| GGTGAAAGGGAGTACTGGAT+TGG | 0.549277 | 7.1:-16902167 | MS.gene38804:CDS |
| AAGTGAGGAGGGTGATGTGT+TGG | 0.550992 | 7.1:-16902134 | MS.gene38804:CDS |
| TGGTTAGAAACACCTAAAGC+TGG | 0.557207 | 7.1:-16902379 | MS.gene38804:CDS |
| GAGGCCACAACTGCACCTTA+CGG | 0.558237 | 7.1:-16906155 | MS.gene38804:CDS |
| GCACCGTCATCAGAACCGTT+GGG | 0.561995 | 7.1:-16905909 | MS.gene38804:CDS |
| AGAGTGTGGAGGACCATACA+AGG | 0.571122 | 7.1:-16903572 | MS.gene38804:CDS |
| ATGCGTCAGCAACATAAAGT+TGG | 0.571537 | 7.1:+16903485 | None:intergenic |
| GTTTCTGTGACATCCTTGGA+TGG | 0.573578 | 7.1:+16906076 | None:intergenic |
| CCTCCCAACGGTTCTGATGA+CGG | 0.575799 | 7.1:+16905906 | None:intergenic |
| CCTTATACTGGAGTTTCCGA+TGG | 0.576811 | 7.1:-16905947 | MS.gene38804:CDS |
| TCCTTGGATAGGAAAAGGGT+TGG | 0.581523 | 7.1:-16902233 | MS.gene38804:CDS |
| ATTAAGTATAACAACTCTTG+TGG | 0.583196 | 7.1:-16902010 | MS.gene38804:CDS |
| AAACTGTTTGTGAAAGCCAA+AGG | 0.587101 | 7.1:+16903388 | None:intergenic |
| GCAGTTCTAAATATGAGAGA+AGG | 0.590598 | 7.1:-16903324 | MS.gene38804:intron |
| TTTCTAGCAATGCCACCAGT+GGG | 0.590642 | 7.1:+16903439 | None:intergenic |
| CCATTTGATGATATGTCCAT+CGG | 0.596449 | 7.1:+16905931 | None:intergenic |
| GCCGCCGTAAGGTGCAGTTG+TGG | 0.597374 | 7.1:+16906151 | None:intergenic |
| TATGTTGCTGACGCATACAT+GGG | 0.600191 | 7.1:-16903478 | MS.gene38804:CDS |
| GATGATGATGATGAAGAGTG+TGG | 0.601295 | 7.1:-16903586 | MS.gene38804:CDS |
| CAAAGAAAGAACACATATGT+GGG | 0.603235 | 7.1:-16903543 | MS.gene38804:CDS |
| TCCCTGAGTTGTCACCACTT+AGG | 0.607006 | 7.1:+16902542 | None:intergenic |
| CCGTGGAGTTACACCATCCA+AGG | 0.614288 | 7.1:-16906089 | MS.gene38804:CDS |
| GCAATTAGGCTAAGTGAGGA+GGG | 0.616806 | 7.1:-16902145 | MS.gene38804:CDS |
| CTCATATTTAGAACTGCTGG+AGG | 0.621135 | 7.1:+16903330 | None:intergenic |
| CCAAACATCGGAAACTCCGA+AGG | 0.621719 | 7.1:+16906048 | None:intergenic |
| TATAAGGTCCTTCACCGTGA+GGG | 0.624280 | 7.1:+16905963 | None:intergenic |
| AACATAAAACGGAGTCCAAG+AGG | 0.625086 | 7.1:-16902316 | MS.gene38804:CDS |
| CCTTGGATGGTGTAACTCCA+CGG | 0.625278 | 7.1:+16906089 | None:intergenic |
| CCGTCACTTCTTCTCCACAC+AGG | 0.627944 | 7.1:-16905877 | MS.gene38804:intron |
| TAATAGAAGGTCTATTAGTG+AGG | 0.628030 | 7.1:-16902086 | MS.gene38804:CDS |
| CGTTGAAGCACAACCCAAGT+GGG | 0.630882 | 7.1:+16903518 | None:intergenic |
| GTTGTTATTGAGCCCACTGG+TGG | 0.642085 | 7.1:-16903451 | MS.gene38804:CDS |
| TAAAACGGAGTCCAAGAGGA+GGG | 0.660053 | 7.1:-16902312 | MS.gene38804:CDS |
| ACGTTGAAGCACAACCCAAG+TGG | 0.670983 | 7.1:+16903517 | None:intergenic |
| CCGTCATCAGAACCGTTGGG+AGG | 0.672156 | 7.1:-16905906 | MS.gene38804:CDS |
| GCCACAACTGCACCTTACGG+CGG | 0.672386 | 7.1:-16906152 | MS.gene38804:CDS |
| ATAAAACGGAGTCCAAGAGG+AGG | 0.675619 | 7.1:-16902313 | MS.gene38804:CDS |
| CCTGTGTGGAGAAGAAGTGA+CGG | 0.679020 | 7.1:+16905877 | None:intergenic |
| ATTGGCAATTAGGCTAAGTG+AGG | 0.684553 | 7.1:-16902149 | MS.gene38804:CDS |
| GTATAAGGTCCTTCACCGTG+AGG | 0.685002 | 7.1:+16905962 | None:intergenic |
| ATTCTCGTATTGCCAAACAT+CGG | 0.691641 | 7.1:+16906036 | None:intergenic |
| GCATGGTTAGCATACAGCCG+TGG | 0.695844 | 7.1:-16906106 | MS.gene38804:CDS |
| GCTGAGAGTGTTAACCTGTG+TGG | 0.698613 | 7.1:+16905863 | None:intergenic |
| TGACGGCAAAGTCCTCCCAA+CGG | 0.704429 | 7.1:+16905894 | None:intergenic |
| GATGATGATGAAGAGTGTGG+AGG | 0.746405 | 7.1:-16903583 | MS.gene38804:CDS |
| TAAGTGGTGACAACTCAGGG+AGG | 0.758730 | 7.1:-16902540 | MS.gene38804:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTAAAAAGGTAATT+TGG | + | chr7.1:16905380-16905399 | None:intergenic | 10.0% |
| !! | AAAATATTAAAATTGGAAAA+TGG | + | chr7.1:16904200-16904219 | None:intergenic | 10.0% |
| !! | AATATGCAAAAAAATTAAAA+AGG | + | chr7.1:16905388-16905407 | None:intergenic | 10.0% |
| !! | ATGTAAAAATAAAGAAAAAG+AGG | + | chr7.1:16905443-16905462 | None:intergenic | 15.0% |
| !! | CTTTATATAAAAATACTACA+TGG | + | chr7.1:16904367-16904386 | None:intergenic | 15.0% |
| !! | GCGATTAAAAATATTAAAAT+TGG | + | chr7.1:16904207-16904226 | None:intergenic | 15.0% |
| !! | TTGTTATACTTAATAACAAA+AGG | + | chr7.1:16906135-16906154 | None:intergenic | 15.0% |
| !!! | AGTATTTTTAAAAACATGAA+TGG | - | chr7.1:16904109-16904128 | MS.gene38804:intron | 15.0% |
| !!! | GAATTATACGTATATTATTT+TGG | + | chr7.1:16903592-16903611 | None:intergenic | 15.0% |
| !!! | TTAATATTTTTAATCGCAAT+TGG | - | chr7.1:16904210-16904229 | MS.gene38804:intron | 15.0% |
| !!! | TTGATCTAAAATTAGAAAAT+TGG | + | chr7.1:16903567-16903586 | None:intergenic | 15.0% |
| !! | AATGTAGAATATTAAGGTAT+TGG | - | chr7.1:16905752-16905771 | MS.gene38804:intron | 20.0% |
| !! | ATACATATATATAATGGTGT+AGG | - | chr7.1:16903480-16903499 | MS.gene38804:CDS | 20.0% |
| !! | ATGGAGAATAGTTATTATTA+TGG | - | chr7.1:16903368-16903387 | MS.gene38804:CDS | 20.0% |
| !! | CACAAAAACTTATTCATATT+TGG | - | chr7.1:16905957-16905976 | MS.gene38804:CDS | 20.0% |
| !! | CTACAAAATGTAGAATATTA+AGG | - | chr7.1:16905746-16905765 | MS.gene38804:intron | 20.0% |
| !! | TAAAGCTTCATATAACTTTA+AGG | + | chr7.1:16905514-16905533 | None:intergenic | 20.0% |
| !! | TAAATATGCATACCAATATA+TGG | - | chr7.1:16905160-16905179 | MS.gene38804:intron | 20.0% |
| !! | TACTACTATATATTAGTGTA+GGG | - | chr7.1:16903441-16903460 | MS.gene38804:CDS | 20.0% |
| !! | TCTTCATTAAAATGTATTCA+AGG | - | chr7.1:16902479-16902498 | MS.gene38804:CDS | 20.0% |
| !! | TGTACTACATTAATTCTTAT+AGG | - | chr7.1:16902392-16902411 | MS.gene38804:CDS | 20.0% |
| !! | TTACTACTATATATTAGTGT+AGG | - | chr7.1:16903440-16903459 | MS.gene38804:CDS | 20.0% |
| !! | TTGACTTTAAATTTGAATGT+AGG | + | chr7.1:16905090-16905109 | None:intergenic | 20.0% |
| !!! | ATCATTTTATTCCATAGTAA+AGG | - | chr7.1:16905417-16905436 | MS.gene38804:intron | 20.0% |
| !!! | CTTTTGGATAAATTAAAAGA+TGG | - | chr7.1:16903349-16903368 | MS.gene38804:CDS | 20.0% |
| !!! | GTTTTATATTTTAATGAACC+AGG | - | chr7.1:16904066-16904085 | MS.gene38804:intron | 20.0% |
| !!! | TAGTATATATTAATGGATGA+TGG | - | chr7.1:16902421-16902440 | MS.gene38804:CDS | 20.0% |
| !!! | TTTTGTATGTATCTTATTCA+TGG | - | chr7.1:16903213-16903232 | MS.gene38804:intron | 20.0% |
| ! | AAAATAGTACCGTTGTTTAA+CGG | + | chr7.1:16905299-16905318 | None:intergenic | 25.0% |
| ! | AACTTATTCATATTTGGCTA+AGG | - | chr7.1:16905963-16905982 | MS.gene38804:CDS | 25.0% |
| ! | AATAAGATGAGATGAACAAT+TGG | + | chr7.1:16904503-16904522 | None:intergenic | 25.0% |
| ! | AATATGATTCCGATTGAATA+CGG | - | chr7.1:16902135-16902154 | MS.gene38804:CDS | 25.0% |
| ! | AATGCTTATAAGTTACATAC+GGG | + | chr7.1:16903300-16903319 | None:intergenic | 25.0% |
| ! | ATGAATGTATCAAATCACTT+TGG | - | chr7.1:16902585-16902604 | MS.gene38804:intron | 25.0% |
| ! | ATGTTGTTCATCTATTAACA+AGG | + | chr7.1:16904280-16904299 | None:intergenic | 25.0% |
| ! | ATTAAGTATAACAACTCTTG+TGG | - | chr7.1:16906141-16906160 | MS.gene38804:CDS | 25.0% |
| ! | CATTAAAATGTATTCAAGGA+GGG | - | chr7.1:16902483-16902502 | MS.gene38804:CDS | 25.0% |
| ! | CTACATTAATTCTTATAGGA+TGG | - | chr7.1:16902396-16902415 | MS.gene38804:CDS | 25.0% |
| ! | GAAGAGAAAAATTTATCCAA+TGG | - | chr7.1:16905884-16905903 | MS.gene38804:CDS | 25.0% |
| ! | GAATGCTTATAAGTTACATA+CGG | + | chr7.1:16903301-16903320 | None:intergenic | 25.0% |
| ! | GATTAATAACCGTTAAACAA+CGG | - | chr7.1:16905287-16905306 | MS.gene38804:intron | 25.0% |
| ! | GTTTATCAAACTTGTAACTT+TGG | + | chr7.1:16902747-16902766 | None:intergenic | 25.0% |
| ! | TCATTAAAATGTATTCAAGG+AGG | - | chr7.1:16902482-16902501 | MS.gene38804:CDS | 25.0% |
| ! | TGCAAAGTGCAATAAATATA+AGG | + | chr7.1:16902991-16903010 | None:intergenic | 25.0% |
| ! | TGTATATTCATATTAGTCGT+GGG | + | chr7.1:16902769-16902788 | None:intergenic | 25.0% |
| ! | TGTTGTTCATCTATTAACAA+GGG | + | chr7.1:16904279-16904298 | None:intergenic | 25.0% |
| !! | ATTTGACAAAAGTTCTCTTT+TGG | - | chr7.1:16903333-16903352 | MS.gene38804:CDS | 25.0% |
| !! | GAATAAGTTTTTGTGTCTAA+AGG | + | chr7.1:16905952-16905971 | None:intergenic | 25.0% |
| !! | GTAACTTATAAGCATTCTTT+TGG | - | chr7.1:16903304-16903323 | MS.gene38804:intron | 25.0% |
| !! | TGTAAAAGTGGTTTATGTTT+TGG | - | chr7.1:16904990-16905009 | MS.gene38804:intron | 25.0% |
| !!! | AATTGAGTTGAATGTAAAAG+TGG | - | chr7.1:16904978-16904997 | MS.gene38804:intron | 25.0% |
| !!! | ATTTTTGAAGATCATAGAAG+TGG | - | chr7.1:16906042-16906061 | MS.gene38804:CDS | 25.0% |
| !!! | GATGGACTAGTATATATTAA+TGG | - | chr7.1:16902414-16902433 | MS.gene38804:CDS | 25.0% |
| !!! | GTGCAAATTTTGAAATTTCA+GGG | + | chr7.1:16902962-16902981 | None:intergenic | 25.0% |
| !!! | GTTGTGAAATAAAGTTGATA+TGG | - | chr7.1:16904523-16904542 | MS.gene38804:intron | 25.0% |
| !!! | TAAAGTTGATATGGTTGATT+TGG | - | chr7.1:16904532-16904551 | MS.gene38804:intron | 25.0% |
| !!! | TGTGCAAATTTTGAAATTTC+AGG | + | chr7.1:16902963-16902982 | None:intergenic | 25.0% |
| AAAACTGAAGTAAGAAGTGA+AGG | - | chr7.1:16903067-16903086 | MS.gene38804:intron | 30.0% | |
| AAAGACCTAACACTTATCTT+GGG | - | chr7.1:16903814-16903833 | MS.gene38804:intron | 30.0% | |
| AAATATCCTTGGATAGGAAA+AGG | - | chr7.1:16905913-16905932 | MS.gene38804:CDS | 30.0% | |
| AACAATCTCACATTTGCAAA+TGG | - | chr7.1:16905679-16905698 | MS.gene38804:intron | 30.0% | |
| AATATCCTTGGATAGGAAAA+GGG | - | chr7.1:16905914-16905933 | MS.gene38804:CDS | 30.0% | |
| AATGGATGCTAAAATATCCT+TGG | - | chr7.1:16905902-16905921 | MS.gene38804:CDS | 30.0% | |
| ACAAAACCCTAGTTAATTGT+TGG | + | chr7.1:16903199-16903218 | None:intergenic | 30.0% | |
| ACACAAACACCTTAAATAAG+GGG | - | chr7.1:16905202-16905221 | MS.gene38804:intron | 30.0% | |
| ACTCAAGATCAACATTTGTA+GGG | - | chr7.1:16904036-16904055 | MS.gene38804:intron | 30.0% | |
| AGACACAAACACCTTAAATA+AGG | - | chr7.1:16905200-16905219 | MS.gene38804:intron | 30.0% | |
| AGTGTTTAGCTATAAGTTTG+AGG | - | chr7.1:16902810-16902829 | MS.gene38804:intron | 30.0% | |
| ATCATAGAAGTGGTAATAGA+AGG | - | chr7.1:16906052-16906071 | MS.gene38804:CDS | 30.0% | |
| ATGCTAAAATATCCTTGGAT+AGG | - | chr7.1:16905907-16905926 | MS.gene38804:CDS | 30.0% | |
| ATGCTTATAAGTTACATACG+GGG | + | chr7.1:16903299-16903318 | None:intergenic | 30.0% | |
| ATGTATCTTATTCATGGACT+TGG | - | chr7.1:16903219-16903238 | MS.gene38804:intron | 30.0% | |
| CAAAATACTCCTTTAGCTAT+TGG | + | chr7.1:16902862-16902881 | None:intergenic | 30.0% | |
| CAAAGAAAGAACACATATGT+GGG | - | chr7.1:16904608-16904627 | MS.gene38804:intron | 30.0% | |
| GACACAAACACCTTAAATAA+GGG | - | chr7.1:16905201-16905220 | MS.gene38804:intron | 30.0% | |
| GATAATAGGTTCTTTCACTA+TGG | - | chr7.1:16904136-16904155 | MS.gene38804:intron | 30.0% | |
| GCAAGATGTTCAATAAAAGA+CGG | - | chr7.1:16904232-16904251 | MS.gene38804:intron | 30.0% | |
| GTGTATATTCATATTAGTCG+TGG | + | chr7.1:16902770-16902789 | None:intergenic | 30.0% | |
| TAAAGACCTAACACTTATCT+TGG | - | chr7.1:16903813-16903832 | MS.gene38804:intron | 30.0% | |
| TAATAGAAGGTCTATTAGTG+AGG | - | chr7.1:16906065-16906084 | MS.gene38804:CDS | 30.0% | |
| TACTCAAGATCAACATTTGT+AGG | - | chr7.1:16904035-16904054 | MS.gene38804:intron | 30.0% | |
| TGTATCTTATTCATGGACTT+GGG | - | chr7.1:16903220-16903239 | MS.gene38804:intron | 30.0% | |
| TTTAATGAAGAGAAGCTTTC+TGG | + | chr7.1:16902470-16902489 | None:intergenic | 30.0% | |
| ! | AACACATTTTGCATGAACAA+AGG | + | chr7.1:16902354-16902373 | None:intergenic | 30.0% |
| ! | ATGAAGTGTCCTATCAAATT+AGG | - | chr7.1:16904171-16904190 | MS.gene38804:intron | 30.0% |
| ! | GATTAGCCAACAATTAACTA+GGG | - | chr7.1:16903190-16903209 | MS.gene38804:intron | 30.0% |
| ! | TGATTAGCCAACAATTAACT+AGG | - | chr7.1:16903189-16903208 | MS.gene38804:intron | 30.0% |
| ! | TGCATATTTAACTTCACTCT+TGG | + | chr7.1:16905150-16905169 | None:intergenic | 30.0% |
| !! | ATTTTAATGAACCAGGTAGT+TGG | - | chr7.1:16904073-16904092 | MS.gene38804:intron | 30.0% |
| !!! | AAGGATATTTTAGCATCCAT+TGG | + | chr7.1:16905903-16905922 | None:intergenic | 30.0% |
| !!! | ACATTGACTTGTTCACTTTT+TGG | + | chr7.1:16905652-16905671 | None:intergenic | 30.0% |
| AAACTGTTTGTGAAAGCCAA+AGG | + | chr7.1:16904766-16904785 | None:intergenic | 35.0% | |
| AAATGGTCGCCTAATTTGAT+AGG | + | chr7.1:16904183-16904202 | None:intergenic | 35.0% | |
| AACACCTTAAATAAGGGGTT+AGG | - | chr7.1:16905207-16905226 | MS.gene38804:intron | 35.0% | |
| AACTTCGTCACTAACACTAA+TGG | - | chr7.1:16903788-16903807 | MS.gene38804:intron | 35.0% | |
| ACATGAATGGAGCTGATAAT+AGG | - | chr7.1:16904122-16904141 | MS.gene38804:intron | 35.0% | |
| AGAAAAAGAGGCCTTTACTA+TGG | + | chr7.1:16905431-16905450 | None:intergenic | 35.0% | |
| AGATAGTGTGTCAAAGAAAG+AGG | + | chr7.1:16902313-16902332 | None:intergenic | 35.0% | |
| AGGACACTTCATTGTTAGTA+AGG | + | chr7.1:16904163-16904182 | None:intergenic | 35.0% | |
| ATTCTCGTATTGCCAAACAT+CGG | + | chr7.1:16902118-16902137 | None:intergenic | 35.0% | |
| CAACTGAATTTGAATTCCGT+TGG | - | chr7.1:16902666-16902685 | MS.gene38804:intron | 35.0% | |
| CACTGGAATCAACCATATAT+TGG | + | chr7.1:16905175-16905194 | None:intergenic | 35.0% | |
| CCAAAGAAAGAACACATATG+TGG | - | chr7.1:16904607-16904626 | MS.gene38804:intron | 35.0% | |
| CCACATATGTGTTCTTTCTT+TGG | + | chr7.1:16904610-16904629 | None:intergenic | 35.0% | |
| TAAAAATACTAGTAGCCGCA+AGG | + | chr7.1:16904099-16904118 | None:intergenic | 35.0% | |
| TACTTGTCTTTGATCCTAAG+TGG | - | chr7.1:16905595-16905614 | MS.gene38804:intron | 35.0% | |
| TCAAATCACTTTGGTAAACG+AGG | - | chr7.1:16902594-16902613 | MS.gene38804:intron | 35.0% | |
| TCATATTTGGCTAAGGTGAA+AGG | - | chr7.1:16905970-16905989 | MS.gene38804:CDS | 35.0% | |
| TGTAACAGAATAGTGAACCA+CGG | + | chr7.1:16903038-16903057 | None:intergenic | 35.0% | |
| TTGGATATTGATCAACGAAC+TGG | - | chr7.1:16904784-16904803 | MS.gene38804:intron | 35.0% | |
| ! | AACTCCTAACCCCTTATTTA+AGG | + | chr7.1:16905214-16905233 | None:intergenic | 35.0% |
| ! | ACTTGGGTCAAATGTTACTT+TGG | - | chr7.1:16903236-16903255 | MS.gene38804:intron | 35.0% |
| ! | AGGAAAGAGATGGAGTATTA+TGG | - | chr7.1:16906091-16906110 | MS.gene38804:CDS | 35.0% |
| ! | CAATATATGGTTGATTCCAG+TGG | - | chr7.1:16905173-16905192 | MS.gene38804:intron | 35.0% |
| ! | CCATTTGATGATATGTCCAT+CGG | + | chr7.1:16902223-16902242 | None:intergenic | 35.0% |
| ! | GGAAAGAGATGGAGTATTAT+GGG | - | chr7.1:16906092-16906111 | MS.gene38804:CDS | 35.0% |
| ! | GGTGCAAAGAGAAATTTTCA+GGG | + | chr7.1:16903016-16903035 | None:intergenic | 35.0% |
| ! | GTTTTCCCGACAACATAAAA+CGG | - | chr7.1:16905824-16905843 | MS.gene38804:intron | 35.0% |
| ! | TCAACACAAGTTGAGTTTGT+TGG | + | chr7.1:16902889-16902908 | None:intergenic | 35.0% |
| ! | TCTCTCATATTTAGAACTGC+TGG | + | chr7.1:16904827-16904846 | None:intergenic | 35.0% |
| !! | CTTGGGTCAAATGTTACTTT+GGG | - | chr7.1:16903237-16903256 | MS.gene38804:intron | 35.0% |
| !! | GCAGTTCTAAATATGAGAGA+AGG | - | chr7.1:16904827-16904846 | MS.gene38804:intron | 35.0% |
| !! | TTTGGCTTTCACAAACAGTT+TGG | - | chr7.1:16904765-16904784 | MS.gene38804:intron | 35.0% |
| AAAATTTCTCTTTGCACCCG+TGG | - | chr7.1:16903018-16903037 | MS.gene38804:intron | 40.0% | |
| AAATGTATTCAAGGAGGGTC+AGG | - | chr7.1:16902488-16902507 | MS.gene38804:CDS | 40.0% | |
| AACACCTAAAGCTGGAACAT+TGG | - | chr7.1:16905780-16905799 | MS.gene38804:intron | 40.0% | |
| AACATAAAACGGAGTCCAAG+AGG | - | chr7.1:16905835-16905854 | MS.gene38804:intron | 40.0% | |
| AAGGTCTATTAGTGAGGTTG+AGG | - | chr7.1:16906071-16906090 | MS.gene38804:CDS | 40.0% | |
| AATGTATTCAAGGAGGGTCA+GGG | - | chr7.1:16902489-16902508 | MS.gene38804:CDS | 40.0% | |
| ACCTAACACTTATCTTGGGA+CGG | - | chr7.1:16903818-16903837 | MS.gene38804:intron | 40.0% | |
| ACTTCCAATGTTCCAGCTTT+AGG | + | chr7.1:16905787-16905806 | None:intergenic | 40.0% | |
| ATGAACCAGAGAAGAAGATG+AGG | - | chr7.1:16903144-16903163 | MS.gene38804:intron | 40.0% | |
| ATGCGTCAGCAACATAAAGT+TGG | + | chr7.1:16904669-16904688 | None:intergenic | 40.0% | |
| ATTGGCAATTAGGCTAAGTG+AGG | - | chr7.1:16906002-16906021 | MS.gene38804:CDS | 40.0% | |
| CATCTCTTAAAGTCCACTCT+TGG | + | chr7.1:16903263-16903282 | None:intergenic | 40.0% | |
| CATGAACAAAGGAATACACG+TGG | + | chr7.1:16902343-16902362 | None:intergenic | 40.0% | |
| CCAAGGAATGTTGAGAAAGA+GGG | - | chr7.1:16903953-16903972 | MS.gene38804:intron | 40.0% | |
| CCGATGGACATATCATCAAA+TGG | - | chr7.1:16902220-16902239 | MS.gene38804:CDS | 40.0% | |
| CCTCTTTCTCAACATTCCTT+GGG | + | chr7.1:16903955-16903974 | None:intergenic | 40.0% | |
| CTCTTTCTCAACATTCCTTG+GGG | + | chr7.1:16903954-16903973 | None:intergenic | 40.0% | |
| GAAGTCTTTGCTAATCTACC+AGG | - | chr7.1:16905802-16905821 | MS.gene38804:intron | 40.0% | |
| GAATGTTGAGAAAGAGGGAT+CGG | - | chr7.1:16903958-16903977 | MS.gene38804:intron | 40.0% | |
| GACAATCCAAACATGACCAA+CGG | + | chr7.1:16902685-16902704 | None:intergenic | 40.0% | |
| GGAGTAGCACTTAGCAAAAA+TGG | - | chr7.1:16905700-16905719 | MS.gene38804:intron | 40.0% | |
| GGTAAACGAGGTAAGAAAGA+GGG | - | chr7.1:16902606-16902625 | MS.gene38804:intron | 40.0% | |
| GTAACAGAATAGTGAACCAC+GGG | + | chr7.1:16903037-16903056 | None:intergenic | 40.0% | |
| GTCACAGAAACATCAACCTT+CGG | - | chr7.1:16902087-16902106 | MS.gene38804:CDS | 40.0% | |
| GTGTGTCTCGTGAAAAATAC+AGG | - | chr7.1:16905569-16905588 | MS.gene38804:intron | 40.0% | |
| TATGTTGCTGACGCATACAT+GGG | - | chr7.1:16904673-16904692 | MS.gene38804:intron | 40.0% | |
| TGAACCAGAGAAGAAGATGA+GGG | - | chr7.1:16903145-16903164 | MS.gene38804:intron | 40.0% | |
| TGAATTCCGTTGGTCATGTT+TGG | - | chr7.1:16902676-16902695 | MS.gene38804:intron | 40.0% | |
| TGGTAAACGAGGTAAGAAAG+AGG | - | chr7.1:16902605-16902624 | MS.gene38804:intron | 40.0% | |
| TGGTTAGAAACACCTAAAGC+TGG | - | chr7.1:16905772-16905791 | MS.gene38804:intron | 40.0% | |
| TTATGTTGCTGACGCATACA+TGG | - | chr7.1:16904672-16904691 | MS.gene38804:intron | 40.0% | |
| TTCTTTGGATGCTCCTTGTA+TGG | + | chr7.1:16904595-16904614 | None:intergenic | 40.0% | |
| TTTATGTTGTCGGGAAAACC+TGG | + | chr7.1:16905823-16905842 | None:intergenic | 40.0% | |
| ! | ACTTGTGTTGACATAGAGTC+AGG | - | chr7.1:16902898-16902917 | MS.gene38804:intron | 40.0% |
| ! | AGAGATGGAGTATTATGGGT+TGG | - | chr7.1:16906096-16906115 | MS.gene38804:CDS | 40.0% |
| ! | CTCATATTTAGAACTGCTGG+AGG | + | chr7.1:16904824-16904843 | None:intergenic | 40.0% |
| ! | CTTGTGTTGACATAGAGTCA+GGG | - | chr7.1:16902899-16902918 | MS.gene38804:intron | 40.0% |
| ! | GATGATGATGATGAAGAGTG+TGG | - | chr7.1:16904565-16904584 | MS.gene38804:intron | 40.0% |
| ! | GCCAATAGCTAAAGGAGTAT+CGG | - | chr7.1:16902836-16902855 | MS.gene38804:intron | 40.0% |
| ! | GGGTGCAAAGAGAAATTTTC+AGG | + | chr7.1:16903017-16903036 | None:intergenic | 40.0% |
| ! | TGATGTTTCTGTGACATCCT+TGG | + | chr7.1:16902082-16902101 | None:intergenic | 40.0% |
| ! | TGGACTCCGTTTTATGTTGT+CGG | + | chr7.1:16905833-16905852 | None:intergenic | 40.0% |
| ! | TTGTGTTGACATAGAGTCAG+GGG | - | chr7.1:16902900-16902919 | MS.gene38804:intron | 40.0% |
| ! | TTTGAAATTTCAGGGTGTGC+AGG | + | chr7.1:16902954-16902973 | None:intergenic | 40.0% |
| !! | TGATATGGTTGATTTGGCAG+AGG | - | chr7.1:16904538-16904557 | MS.gene38804:intron | 40.0% |
| !!! | CAGGTTTTAACTCTATGCAG+TGG | + | chr7.1:16903746-16903765 | None:intergenic | 40.0% |
| !!! | GAATTTTTTTTGCACCCCCT+GGG | - | chr7.1:16903703-16903722 | MS.gene38804:intron | 40.0% |
| !!! | TGAATTTTTTTTGCACCCCC+TGG | - | chr7.1:16903702-16903721 | MS.gene38804:intron | 40.0% |
| ACGGCTACCGAGATTATTGA+TGG | - | chr7.1:16904003-16904022 | MS.gene38804:intron | 45.0% | |
| ACTTCTCCTTCCAGTATGCT+GGG | + | chr7.1:16903103-16903122 | None:intergenic | 45.0% | |
| AGTGAGGTTGAGGAAAGAGA+TGG | - | chr7.1:16906081-16906100 | MS.gene38804:CDS | 45.0% | |
| ATAAAACGGAGTCCAAGAGG+AGG | - | chr7.1:16905838-16905857 | MS.gene38804:intron | 45.0% | |
| ATACTGGAAGGAGAAGTGGA+AGG | - | chr7.1:16903106-16903125 | MS.gene38804:intron | 45.0% | |
| ATCCTAAGTGGTGACAACTC+AGG | - | chr7.1:16905607-16905626 | MS.gene38804:intron | 45.0% | |
| ATCGGTAACCGAGGTAGATT+CGG | - | chr7.1:16903976-16903995 | MS.gene38804:intron | 45.0% | |
| CCATCGGAAACTCCAGTATA+AGG | + | chr7.1:16902207-16902226 | None:intergenic | 45.0% | |
| CCCAAGGAATGTTGAGAAAG+AGG | - | chr7.1:16903952-16903971 | MS.gene38804:intron | 45.0% | |
| CCCTCTTTCTCAACATTCCT+TGG | + | chr7.1:16903956-16903975 | None:intergenic | 45.0% | |
| CCTTATACTGGAGTTTCCGA+TGG | - | chr7.1:16902204-16902223 | MS.gene38804:CDS | 45.0% | |
| CGAGGTAAGAAAGAGGGTAA+TGG | - | chr7.1:16902612-16902631 | MS.gene38804:intron | 45.0% | |
| CTCGTCGCCATCAATAATCT+CGG | + | chr7.1:16904013-16904032 | None:intergenic | 45.0% | |
| GCAATTAGGCTAAGTGAGGA+GGG | - | chr7.1:16906006-16906025 | MS.gene38804:CDS | 45.0% | |
| GCCGATACTCCTTTAGCTAT+TGG | + | chr7.1:16902840-16902859 | None:intergenic | 45.0% | |
| GCGGATCTATATAGAGGTGA+GGG | - | chr7.1:16902922-16902941 | MS.gene38804:intron | 45.0% | |
| GTACTAAGTTTCCCGTCTGA+AGG | + | chr7.1:16903917-16903936 | None:intergenic | 45.0% | |
| GTGTTTGTGTCTGATACCAC+TGG | + | chr7.1:16905192-16905211 | None:intergenic | 45.0% | |
| GTTTCTGTGACATCCTTGGA+TGG | + | chr7.1:16902078-16902097 | None:intergenic | 45.0% | |
| TAAAACGGAGTCCAAGAGGA+GGG | - | chr7.1:16905839-16905858 | MS.gene38804:intron | 45.0% | |
| TATAAGGTCCTTCACCGTGA+GGG | + | chr7.1:16902191-16902210 | None:intergenic | 45.0% | |
| TCCTAAGTGGTGACAACTCA+GGG | - | chr7.1:16905608-16905627 | MS.gene38804:intron | 45.0% | |
| TCCTTGGATAGGAAAAGGGT+TGG | - | chr7.1:16905918-16905937 | MS.gene38804:CDS | 45.0% | |
| TGAATCGTAACCCAGCATAC+TGG | - | chr7.1:16903090-16903109 | MS.gene38804:intron | 45.0% | |
| TGAGGTCAGCCAATAGCTAA+AGG | - | chr7.1:16902828-16902847 | MS.gene38804:intron | 45.0% | |
| TGCAGCAGAAGAACAACCTT+TGG | - | chr7.1:16904747-16904766 | MS.gene38804:intron | 45.0% | |
| TTGTGCTTCAACGTAGCATC+TGG | - | chr7.1:16904643-16904662 | MS.gene38804:intron | 45.0% | |
| ! | ACCAACCCTTTTCCTATCCA+AGG | + | chr7.1:16905922-16905941 | None:intergenic | 45.0% |
| ! | CTAGTTGTTATTGAGCCCAC+TGG | - | chr7.1:16904697-16904716 | MS.gene38804:intron | 45.0% |
| ! | GATGATGATGAAGAGTGTGG+AGG | - | chr7.1:16904568-16904587 | MS.gene38804:intron | 45.0% |
| ! | GGACTCCGTTTTATGTTGTC+GGG | + | chr7.1:16905832-16905851 | None:intergenic | 45.0% |
| ! | TGGCAGTTTTCATGACTGCA+TGG | - | chr7.1:16902028-16902047 | MS.gene38804:CDS | 45.0% |
| ! | TTTCTAGCAATGCCACCAGT+GGG | + | chr7.1:16904715-16904734 | None:intergenic | 45.0% |
| !! | ATGTTACTTTGGGCCAAGAG+TGG | - | chr7.1:16903247-16903266 | MS.gene38804:intron | 45.0% |
| !! | GAGTATCGGCCAATAGCTAA+AGG | - | chr7.1:16902850-16902869 | MS.gene38804:intron | 45.0% |
| !! | TTTTCTAGCAATGCCACCAG+TGG | + | chr7.1:16904716-16904735 | None:intergenic | 45.0% |
| !! | AATAAATAAAAAATAAACAA+AGG | + | chr7.1:16903525-16903544 | None:intergenic | 5.0% |
| !! | ATATATATACATATATATAA+TGG | - | chr7.1:16903474-16903493 | MS.gene38804:CDS | 5.0% |
| AAGTGAGGAGGGTGATGTGT+TGG | - | chr7.1:16906017-16906036 | MS.gene38804:CDS | 50.0% | |
| ACCAGAGAAGAAGATGAGGG+AGG | - | chr7.1:16903148-16903167 | MS.gene38804:intron | 50.0% | |
| ACGTTGAAGCACAACCCAAG+TGG | + | chr7.1:16904637-16904656 | None:intergenic | 50.0% | |
| AGAGAAGAAGATGAGGGAGG+CGG | - | chr7.1:16903151-16903170 | MS.gene38804:intron | 50.0% | |
| AGAGTGTGGAGGACCATACA+AGG | - | chr7.1:16904579-16904598 | MS.gene38804:intron | 50.0% | |
| CACGGTGAAGGACCTTATAC+TGG | - | chr7.1:16902192-16902211 | MS.gene38804:CDS | 50.0% | |
| CACTTCTCCTTCCAGTATGC+TGG | + | chr7.1:16903104-16903123 | None:intergenic | 50.0% | |
| CAGCATACTGGAAGGAGAAG+TGG | - | chr7.1:16903102-16903121 | MS.gene38804:intron | 50.0% | |
| CCAAACATCGGAAACTCCGA+AGG | + | chr7.1:16902106-16902125 | None:intergenic | 50.0% | |
| CCACAACACGAGGAGTTGTT+GGG | + | chr7.1:16903880-16903899 | None:intergenic | 50.0% | |
| CCGAGGTAGATTCGGCTAAA+CGG | - | chr7.1:16903984-16904003 | MS.gene38804:intron | 50.0% | |
| CCGTTTAGCCGAATCTACCT+CGG | + | chr7.1:16903987-16904006 | None:intergenic | 50.0% | |
| CCTGTGTGGAGAAGAAGTGA+CGG | + | chr7.1:16902277-16902296 | None:intergenic | 50.0% | |
| CCTTCGGAGTTTCCGATGTT+TGG | - | chr7.1:16902103-16902122 | MS.gene38804:CDS | 50.0% | |
| CCTTGGATGGTGTAACTCCA+CGG | + | chr7.1:16902065-16902084 | None:intergenic | 50.0% | |
| CGTTGAAGCACAACCCAAGT+GGG | + | chr7.1:16904636-16904655 | None:intergenic | 50.0% | |
| GACGAAGTTCATTTCCTCGC+AGG | + | chr7.1:16903777-16903796 | None:intergenic | 50.0% | |
| GCCGTCCCAAGATAAGTGTT+AGG | + | chr7.1:16903822-16903841 | None:intergenic | 50.0% | |
| GGCAATTAGGCTAAGTGAGG+AGG | - | chr7.1:16906005-16906024 | MS.gene38804:CDS | 50.0% | |
| GGCGGATCTATATAGAGGTG+AGG | - | chr7.1:16902921-16902940 | MS.gene38804:intron | 50.0% | |
| GTATAAGGTCCTTCACCGTG+AGG | + | chr7.1:16902192-16902211 | None:intergenic | 50.0% | |
| TAAGTGGTGACAACTCAGGG+AGG | - | chr7.1:16905611-16905630 | MS.gene38804:intron | 50.0% | |
| TCAGGGGCGGATCTATATAG+AGG | - | chr7.1:16902916-16902935 | MS.gene38804:intron | 50.0% | |
| TCCACAACACGAGGAGTTGT+TGG | + | chr7.1:16903881-16903900 | None:intergenic | 50.0% | |
| TCCCTGAGTTGTCACCACTT+AGG | + | chr7.1:16905612-16905631 | None:intergenic | 50.0% | |
| TCGTAACCCAGCATACTGGA+AGG | - | chr7.1:16903094-16903113 | MS.gene38804:intron | 50.0% | |
| TCGTGTTGTGGAACCAGAGT+TGG | - | chr7.1:16903889-16903908 | MS.gene38804:intron | 50.0% | |
| TGTTGACATAGAGTCAGGGG+CGG | - | chr7.1:16902903-16902922 | MS.gene38804:intron | 50.0% | |
| ! | AACTCTGGTTCCACAACACG+AGG | + | chr7.1:16903890-16903909 | None:intergenic | 50.0% |
| ! | AGTTTTGCCTTCGACCCTCA+CGG | - | chr7.1:16902174-16902193 | MS.gene38804:CDS | 50.0% |
| ! | GAGTCCAAGAGGAGGGTTTT+GGG | - | chr7.1:16905846-16905865 | MS.gene38804:intron | 50.0% |
| ! | GTTGTTATTGAGCCCACTGG+TGG | - | chr7.1:16904700-16904719 | MS.gene38804:intron | 50.0% |
| !! | CTTCTAAAGTTGACGCCCCA+AGG | - | chr7.1:16903936-16903955 | MS.gene38804:intron | 50.0% |
| !! | GCTGAGAGTGTTAACCTGTG+TGG | + | chr7.1:16902291-16902310 | None:intergenic | 50.0% |
| AACCTGTCAGAAAGCCTGCG+AGG | - | chr7.1:16903760-16903779 | MS.gene38804:intron | 55.0% | |
| ACATATGTGGGCGCCCACTT+GGG | - | chr7.1:16904620-16904639 | MS.gene38804:intron | 55.0% | |
| CCAACCCAAAACCCTCCTCT+TGG | + | chr7.1:16905853-16905872 | None:intergenic | 55.0% | |
| CCAACGGCGCCGTATTCAAT+CGG | + | chr7.1:16902147-16902166 | None:intergenic | 55.0% | |
| CCCAACAACTCCTCGTGTTG+TGG | - | chr7.1:16903877-16903896 | MS.gene38804:intron | 55.0% | |
| CCGTCACTTCTTCTCCACAC+AGG | - | chr7.1:16902274-16902293 | MS.gene38804:CDS | 55.0% | |
| CCGTGGAGTTACACCATCCA+AGG | - | chr7.1:16902062-16902081 | MS.gene38804:CDS | 55.0% | |
| GAAAGAGGGATCGGTAACCG+AGG | - | chr7.1:16903967-16903986 | MS.gene38804:intron | 55.0% | |
| GAGGCCACAACTGCACCTTA+CGG | - | chr7.1:16901996-16902015 | MS.gene38804:CDS | 55.0% | |
| GCACCGTCATCAGAACCGTT+GGG | - | chr7.1:16902242-16902261 | MS.gene38804:CDS | 55.0% | |
| GCATGGTTAGCATACAGCCG+TGG | - | chr7.1:16902045-16902064 | MS.gene38804:CDS | 55.0% | |
| GCCTCCCTCATCTTCTTCTC+TGG | + | chr7.1:16903152-16903171 | None:intergenic | 55.0% | |
| GGCAAAACTCTCCGGTCCAA+CGG | + | chr7.1:16902163-16902182 | None:intergenic | 55.0% | |
| GGGTCGAAGGCAAAACTCTC+CGG | + | chr7.1:16902171-16902190 | None:intergenic | 55.0% | |
| GTTGGGCTCGTCAAAGCAGA+GGG | + | chr7.1:16903863-16903882 | None:intergenic | 55.0% | |
| TGACGGCAAAGTCCTCCCAA+CGG | + | chr7.1:16902260-16902279 | None:intergenic | 55.0% | |
| TGTTGGGCTCGTCAAAGCAG+AGG | + | chr7.1:16903864-16903883 | None:intergenic | 55.0% | |
| TTCCTCGCAGGCTTTCTGAC+AGG | + | chr7.1:16903765-16903784 | None:intergenic | 55.0% | |
| ! | CAGAGTTGGCTCCTTCAGAC+GGG | - | chr7.1:16903903-16903922 | MS.gene38804:intron | 55.0% |
| ! | CCAGAGTTGGCTCCTTCAGA+CGG | - | chr7.1:16903902-16903921 | MS.gene38804:intron | 55.0% |
| ! | CCTCCCAACGGTTCTGATGA+CGG | + | chr7.1:16902248-16902267 | None:intergenic | 55.0% |
| ! | GGAGTCCAAGAGGAGGGTTT+TGG | - | chr7.1:16905845-16905864 | MS.gene38804:intron | 55.0% |
| !! | GAACCAGGTAGTTGGCCTTG+CGG | - | chr7.1:16904081-16904100 | MS.gene38804:intron | 55.0% |
| !!! | CCAAGAGGAGGGTTTTGGGT+TGG | - | chr7.1:16905850-16905869 | MS.gene38804:intron | 55.0% |
| CACATATGTGGGCGCCCACT+TGG | - | chr7.1:16904619-16904638 | MS.gene38804:intron | 60.0% | |
| CCGATTGAATACGGCGCCGT+TGG | - | chr7.1:16902144-16902163 | MS.gene38804:CDS | 60.0% | |
| CCGTCATCAGAACCGTTGGG+AGG | - | chr7.1:16902245-16902264 | MS.gene38804:CDS | 60.0% | |
| CCGTCTGAAGGAGCCAACTC+TGG | + | chr7.1:16903905-16903924 | None:intergenic | 60.0% | |
| CTCTATGCAGTGGCGTGTCC+AGG | + | chr7.1:16903736-16903755 | None:intergenic | 60.0% | |
| GCCACAACTGCACCTTACGG+CGG | - | chr7.1:16901999-16902018 | MS.gene38804:CDS | 60.0% | |
| GGCACCGTCATCAGAACCGT+TGG | - | chr7.1:16902241-16902260 | MS.gene38804:CDS | 60.0% | |
| TAGCCGCAAGGCCAACTACC+TGG | + | chr7.1:16904087-16904106 | None:intergenic | 60.0% | |
| TCCTTCACCGTGAGGGTCGA+AGG | + | chr7.1:16902184-16902203 | None:intergenic | 60.0% | |
| TGAATACGGCGCCGTTGGAC+CGG | - | chr7.1:16902149-16902168 | MS.gene38804:CDS | 60.0% | |
| ! | TTTTTGCACCCCCTGGGCCA+GGG | - | chr7.1:16903709-16903728 | MS.gene38804:intron | 60.0% |
| !!! | TTTTTTGCACCCCCTGGGCC+AGG | - | chr7.1:16903708-16903727 | MS.gene38804:intron | 60.0% |
| GCCGCCGTAAGGTGCAGTTG+TGG | + | chr7.1:16902003-16902022 | None:intergenic | 65.0% | |
| GCCTTCGACCCTCACGGTGA+AGG | - | chr7.1:16902180-16902199 | MS.gene38804:CDS | 65.0% | |
| CAGTGGCGTGTCCAGGACCC+TGG | + | chr7.1:16903729-16903748 | None:intergenic | 70.0% | |
| CTGCCACGACAGCCGCCGTA+AGG | + | chr7.1:16902014-16902033 | None:intergenic | 70.0% | |
| GCACCTTACGGCGGCTGTCG+TGG | - | chr7.1:16902008-16902027 | MS.gene38804:CDS | 70.0% | |
| GTGTCCAGGACCCTGGCCCA+GGG | + | chr7.1:16903722-16903741 | None:intergenic | 70.0% | |
| TGTCCAGGACCCTGGCCCAG+GGG | + | chr7.1:16903721-16903740 | None:intergenic | 70.0% | |
| CGTGTCCAGGACCCTGGCCC+AGG | + | chr7.1:16903723-16903742 | None:intergenic | 75.0% | |
| GTCCAGGACCCTGGCCCAGG+GGG | + | chr7.1:16903720-16903739 | None:intergenic | 75.0% | |
| ! | CACCCCCTGGGCCAGGGTCC+TGG | - | chr7.1:16903715-16903734 | MS.gene38804:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 16901994 | 16906179 | 16901994 | ID=MS.gene38804 |
| chr7.1 | mRNA | 16901994 | 16906179 | 16901994 | ID=MS.gene38804.t1;Parent=MS.gene38804 |
| chr7.1 | exon | 16905878 | 16906179 | 16905878 | ID=MS.gene38804.t1.exon1;Parent=MS.gene38804.t1 |
| chr7.1 | CDS | 16905878 | 16906179 | 16905878 | ID=cds.MS.gene38804.t1;Parent=MS.gene38804.t1 |
| chr7.1 | exon | 16903325 | 16903615 | 16903325 | ID=MS.gene38804.t1.exon2;Parent=MS.gene38804.t1 |
| chr7.1 | CDS | 16903325 | 16903615 | 16903325 | ID=cds.MS.gene38804.t1;Parent=MS.gene38804.t1 |
| chr7.1 | exon | 16901994 | 16902582 | 16901994 | ID=MS.gene38804.t1.exon3;Parent=MS.gene38804.t1 |
| chr7.1 | CDS | 16901994 | 16902582 | 16901994 | ID=cds.MS.gene38804.t1;Parent=MS.gene38804.t1 |
| Gene Sequence |
| Protein sequence |
