Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38951.t1 | RHN51920.1 | 69.8 | 321 | 56 | 1 | 42 | 362 | 1 | 280 | 6.30E-117 | 431.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38951.t1 | O65278 | 25.1 | 223 | 139 | 7 | 477 | 693 | 141 | 341 | 2.8e-12 | 75.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38951.t1 | A0A396HF22 | 69.8 | 321 | 56 | 1 | 42 | 362 | 1 | 280 | 4.5e-117 | 431.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054359 | MS.gene38951 | 0.831658 | 1.47E-55 | -1.69E-46 |
| MS.gene058870 | MS.gene38951 | 0.875166 | 3.82E-68 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38951.t1 | MTR_8g009990 | 63.500 | 400 | 44 | 4 | 1 | 399 | 1 | 299 | 1.27e-160 | 466 |
| MS.gene38951.t1 | MTR_0008s0230 | 81.622 | 185 | 27 | 2 | 495 | 679 | 17 | 194 | 1.12e-99 | 309 |
| MS.gene38951.t1 | MTR_0008s0230 | 93.750 | 32 | 2 | 0 | 653 | 684 | 276 | 307 | 1.03e-13 | 73.2 |
| MS.gene38951.t1 | MTR_0186s0120 | 88.525 | 122 | 14 | 0 | 20 | 141 | 1 | 122 | 1.65e-69 | 223 |
| MS.gene38951.t1 | MTR_4g131870 | 94.505 | 91 | 5 | 0 | 1 | 91 | 1 | 91 | 3.49e-53 | 178 |
| MS.gene38951.t1 | MTR_1g054565 | 94.505 | 91 | 5 | 0 | 1 | 91 | 1 | 91 | 3.49e-53 | 178 |
| MS.gene38951.t1 | MTR_1g050130 | 93.407 | 91 | 6 | 0 | 1 | 91 | 1 | 91 | 1.02e-52 | 177 |
| MS.gene38951.t1 | MTR_3g014770 | 93.407 | 91 | 6 | 0 | 1 | 91 | 1 | 91 | 2.14e-52 | 176 |
| MS.gene38951.t1 | MTR_3g014760 | 32.812 | 192 | 117 | 3 | 22 | 213 | 9 | 188 | 8.08e-29 | 117 |
| MS.gene38951.t1 | MTR_7g102530 | 33.854 | 192 | 121 | 3 | 22 | 213 | 9 | 194 | 1.01e-28 | 117 |
| MS.gene38951.t1 | MTR_4g131860 | 33.854 | 192 | 121 | 3 | 22 | 213 | 9 | 194 | 1.01e-28 | 117 |
| MS.gene38951.t1 | MTR_1g050140 | 33.854 | 192 | 121 | 3 | 22 | 213 | 9 | 194 | 1.78e-28 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38951.t1 | AT4G00690 | 25.112 | 223 | 139 | 8 | 477 | 693 | 141 | 341 | 5.52e-13 | 71.2 |
| MS.gene38951.t1 | AT4G15880 | 26.335 | 281 | 164 | 14 | 419 | 693 | 246 | 489 | 4.30e-11 | 66.2 |
Find 173 sgRNAs with CRISPR-Local
Find 393 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGCTCTTAGTACCTATAAT+TGG | 0.159588 | 8.4:+49475852 | MS.gene38951:CDS |
| CTAGATCTTTGTTTGGCTTT+AGG | 0.193581 | 8.4:+49475584 | MS.gene38951:CDS |
| GATACAGTTATACACATTTC+TGG | 0.200591 | 8.4:+49475947 | MS.gene38951:CDS |
| ACAAAGATCTAGATGTTTAA+AGG | 0.263714 | 8.4:-49475573 | None:intergenic |
| ATGCGTGGAAAACGCTTAAT+TGG | 0.267383 | 8.4:-49476116 | None:intergenic |
| TGAGGTAGTTGATGATTTAA+AGG | 0.268632 | 8.4:+49477372 | MS.gene38951:CDS |
| TGAGGGAAAACAAACGAAAA+AGG | 0.283246 | 8.4:+49475231 | MS.gene38951:CDS |
| AGATATGTTGGAATCTTCTT+TGG | 0.284687 | 8.4:+49478341 | MS.gene38951:CDS |
| TTAATATAACTGTGTGATTT+CGG | 0.290724 | 8.4:-49475797 | None:intergenic |
| GAGGATATTAAAAGCAAATA+AGG | 0.296971 | 8.4:+49476498 | MS.gene38951:CDS |
| TGTGGGATGGTGAAGCAAAA+TGG | 0.309075 | 8.4:+49478531 | MS.gene38951:CDS |
| CGCTCTTAGTACCTATAATT+GGG | 0.312086 | 8.4:+49475853 | MS.gene38951:CDS |
| ATTTACCAAAGCAACAAAAT+TGG | 0.312599 | 8.4:+49478379 | MS.gene38951:CDS |
| GCTTTAGGTTTGCCTATTGT+AGG | 0.336005 | 8.4:+49475599 | MS.gene38951:CDS |
| GCTTAATTGGACCACTGGTT+AGG | 0.336914 | 8.4:-49476103 | None:intergenic |
| CATTGGAGTTTACGTCCTTC+AGG | 0.346042 | 8.4:-49477400 | None:intergenic |
| TGATTAGTTGGTTGAGGACT+TGG | 0.348837 | 8.4:+49476294 | MS.gene38951:intron |
| CCTTAGGTTATTAATATTGC+TGG | 0.350091 | 8.4:+49477185 | MS.gene38951:intron |
| AATAAAGGAGCGAACAATAA+TGG | 0.351397 | 8.4:+49478318 | MS.gene38951:CDS |
| AACAGCAACACCCCAATTAT+AGG | 0.367016 | 8.4:-49475864 | None:intergenic |
| ATGTCCAGTGGTCTTCGAAC+TGG | 0.369613 | 8.4:-49478079 | None:intergenic |
| AACCATTCTCAAGTTGGTAT+TGG | 0.370824 | 8.4:+49476364 | MS.gene38951:CDS |
| AACACAAAGATTTGCTTTCC+CGG | 0.375365 | 8.4:+49476452 | MS.gene38951:CDS |
| GTAGATGAGTTGCGTGTTGC+CGG | 0.380253 | 8.4:+49477029 | MS.gene38951:CDS |
| TGGTTGCCCAGCCGTATTGC+AGG | 0.381669 | 8.4:+49475967 | MS.gene38951:CDS |
| GTTTACCGGAAACTAGTGAT+AGG | 0.386283 | 8.4:+49475627 | MS.gene38951:CDS |
| CTACGTTGTCCCCTTCTTGA+AGG | 0.389579 | 8.4:-49475724 | None:intergenic |
| TGCAGTATCTAATACAAATC+TGG | 0.391438 | 8.4:-49480102 | None:intergenic |
| CTTCCTACTTCCATGCTACT+TGG | 0.397148 | 8.4:-49476547 | None:intergenic |
| GTGGGATGGTGAAGCAAAAT+GGG | 0.404332 | 8.4:+49478532 | MS.gene38951:CDS |
| GTGGATATGAAGACCTATAT+AGG | 0.406234 | 8.4:+49475467 | MS.gene38951:CDS |
| AAATGCCTCAAGGCAGCGTT+TGG | 0.407622 | 8.4:+49478163 | MS.gene38951:CDS |
| GTAGTGGAATTGATGAATAA+AGG | 0.409455 | 8.4:+49478303 | MS.gene38951:CDS |
| TAAACATCTAGATCTTTGTT+TGG | 0.414217 | 8.4:+49475577 | MS.gene38951:CDS |
| CTAACCCTATCACTAGTTTC+CGG | 0.415358 | 8.4:-49475632 | None:intergenic |
| CAGTGAAATTGTTTGTCGTC+TGG | 0.416799 | 8.4:+49480055 | MS.gene38951:CDS |
| AGTACCATTCATTCCTATAT+AGG | 0.420459 | 8.4:-49475480 | None:intergenic |
| ACTTCCTCGCCTTCATGCAT+TGG | 0.432506 | 8.4:-49477061 | None:intergenic |
| GGAGTTGGATGATGATGATA+TGG | 0.432653 | 8.4:+49476798 | MS.gene38951:CDS |
| TGATGATGATATGGCTGAAA+AGG | 0.433309 | 8.4:+49476807 | MS.gene38951:CDS |
| TTTATTCTGCACACATGAAA+AGG | 0.433361 | 8.4:+49476876 | MS.gene38951:CDS |
| CTTAATTGGACCACTGGTTA+GGG | 0.433873 | 8.4:-49476102 | None:intergenic |
| AATGAATGGTACTTTATTGA+AGG | 0.438781 | 8.4:+49475490 | MS.gene38951:CDS |
| GGTATATGTTCTTAAGTACT+TGG | 0.444660 | 8.4:+49478505 | MS.gene38951:CDS |
| TATGTTGGAATCTTCTTTGG+AGG | 0.445095 | 8.4:+49478344 | MS.gene38951:CDS |
| TTCAATACCTGCAATACGGC+TGG | 0.445664 | 8.4:-49475974 | None:intergenic |
| TCTTCATATCCACAAGATAT+CGG | 0.446334 | 8.4:-49475457 | None:intergenic |
| AGCAAATAAGGTTGACGGTA+GGG | 0.449525 | 8.4:+49476510 | MS.gene38951:CDS |
| TTGGAAGAAGAAAATGATGA+TGG | 0.450909 | 8.4:+49476706 | MS.gene38951:CDS |
| TTAATATGATTAGTTGGTTG+AGG | 0.451553 | 8.4:+49476288 | MS.gene38951:intron |
| TTCTTTGGAGGTTGTAGTGG+TGG | 0.452564 | 8.4:+49478356 | MS.gene38951:CDS |
| TTTGCGCATCAGACAATGTT+CGG | 0.454164 | 8.4:-49475409 | None:intergenic |
| GGTAAACACTCTCCTACAAT+AGG | 0.455224 | 8.4:-49475611 | None:intergenic |
| TGAATTTCCGCTCAGTCCAT+TGG | 0.455335 | 8.4:-49477417 | None:intergenic |
| TTCTTAAGTACTTGGAGTTG+TGG | 0.459941 | 8.4:+49478513 | MS.gene38951:CDS |
| AAGATTGATGCGGATAATGA+TGG | 0.460099 | 8.4:+49476601 | MS.gene38951:CDS |
| TAGATGAGTTGCGTGTTGCC+GGG | 0.464352 | 8.4:+49477030 | MS.gene38951:CDS |
| TATCTACCAACTTATTAGTA+CGG | 0.467587 | 8.4:-49475382 | None:intergenic |
| ATCTACCAACTTATTAGTAC+GGG | 0.467987 | 8.4:-49475381 | None:intergenic |
| AGGTGGGATGCAAGTAGCTT+GGG | 0.470670 | 8.4:+49475524 | MS.gene38951:CDS |
| TGGGATTTAGAGTAGGCGTT+AGG | 0.472541 | 8.4:+49475543 | MS.gene38951:CDS |
| TCTTAAGTACTTGGAGTTGT+GGG | 0.482984 | 8.4:+49478514 | MS.gene38951:CDS |
| CATGTTACGTGTTGGACCAT+AGG | 0.488808 | 8.4:+49478099 | MS.gene38951:CDS |
| AATATTCAATACCTGCAATA+CGG | 0.491166 | 8.4:-49475978 | None:intergenic |
| TATTGTAGGAGAGTGTTTAC+CGG | 0.495009 | 8.4:+49475613 | MS.gene38951:CDS |
| AGAAAATGATGGGATGAAGT+TGG | 0.497063 | 8.4:+49476651 | MS.gene38951:CDS |
| TGAAGGAATTATTGCATAGG+TGG | 0.500937 | 8.4:+49475507 | MS.gene38951:CDS |
| ACCAACTTGAGAATGGTTAA+CGG | 0.500987 | 8.4:-49476359 | None:intergenic |
| AACATGACCTCCATCCACTT+TGG | 0.501951 | 8.4:-49476150 | None:intergenic |
| AAGCTGAAGGTCCTTCAAGA+AGG | 0.502318 | 8.4:+49475713 | MS.gene38951:CDS |
| ATCCTCAAGGATTGAAACCC+GGG | 0.502408 | 8.4:-49476470 | None:intergenic |
| TAAAGACAATGGGATGGAGT+TGG | 0.505100 | 8.4:+49476783 | MS.gene38951:CDS |
| CTCCAATACCAACTTGAGAA+TGG | 0.505693 | 8.4:-49476366 | None:intergenic |
| CATACATTGTCCTCTTCCTA+TGG | 0.507544 | 8.4:-49478115 | None:intergenic |
| AGCATTACCAATGAATAGTC+GGG | 0.509033 | 8.4:-49478569 | None:intergenic |
| ATGGAAGAAGATAAAGACAA+TGG | 0.509362 | 8.4:+49476772 | MS.gene38951:CDS |
| TAGGTGGGATGCAAGTAGCT+TGG | 0.510938 | 8.4:+49475523 | MS.gene38951:CDS |
| AAGCATTACCAATGAATAGT+CGG | 0.511109 | 8.4:-49478570 | None:intergenic |
| AAGACCTATATAGGAATGAA+TGG | 0.515117 | 8.4:+49475476 | MS.gene38951:CDS |
| ATCTTCTTTGGAGGTTGTAG+TGG | 0.519883 | 8.4:+49478353 | MS.gene38951:CDS |
| TGGAAGAAGATAAAGACAAT+GGG | 0.520727 | 8.4:+49476773 | MS.gene38951:CDS |
| GCCGTTAACCATTCTCAAGT+TGG | 0.520859 | 8.4:+49476358 | MS.gene38951:CDS |
| GAAGAGGACAATGTATGTGC+TGG | 0.521423 | 8.4:+49478121 | MS.gene38951:CDS |
| AGGTTATTAATATTGCTGGC+AGG | 0.523648 | 8.4:+49477189 | MS.gene38951:intron |
| ACTTACAGGAGGATATCCTT+CGG | 0.524242 | 8.4:+49480027 | MS.gene38951:intron |
| TTAAAAGCAAATAAGGTTGA+CGG | 0.525394 | 8.4:+49476505 | MS.gene38951:CDS |
| AACTCCGTTCCGATATCTTG+TGG | 0.528157 | 8.4:+49475448 | MS.gene38951:CDS |
| GGAAAAGCAGAAGAAAATGA+TGG | 0.528960 | 8.4:+49476640 | MS.gene38951:CDS |
| TGTCTAGAATGTTGATGAGT+GGG | 0.529221 | 8.4:+49477568 | MS.gene38951:intron |
| AATGCCCCGTACTAATAAGT+TGG | 0.529713 | 8.4:+49475376 | MS.gene38951:CDS |
| GATGGGTTGAAAAGTGAGGC+GGG | 0.530008 | 8.4:+49476619 | MS.gene38951:CDS |
| CCGCAACGCCTCAAGTGTCT+TGG | 0.532629 | 8.4:-49477461 | None:intergenic |
| AATGCATGAAGGCGAGGAAG+TGG | 0.532769 | 8.4:+49477063 | MS.gene38951:CDS |
| ATACCCGCGGATTTATTGAT+CGG | 0.534688 | 8.4:+49480128 | MS.gene38951:CDS |
| AAAACGCTTAATTGGACCAC+TGG | 0.534869 | 8.4:-49476108 | None:intergenic |
| GAGTATGCCCGACTATTCAT+TGG | 0.535075 | 8.4:+49478562 | MS.gene38951:CDS |
| GAACAATAATGGAGATATGT+TGG | 0.538044 | 8.4:+49478329 | MS.gene38951:CDS |
| AGCTGAAGGTCCTTCAAGAA+GGG | 0.538805 | 8.4:+49475714 | MS.gene38951:CDS |
| CAATCCTTGAGGATGATATG+AGG | 0.550170 | 8.4:+49476479 | MS.gene38951:CDS |
| CTTATATGGCTGAACATCAA+AGG | 0.550916 | 8.4:+49476419 | MS.gene38951:CDS |
| TGTCCAGTGGTCTTCGAACT+GGG | 0.551007 | 8.4:-49478078 | None:intergenic |
| GGCATTTGAGTCTTTATCTG+TGG | 0.552622 | 8.4:-49475359 | None:intergenic |
| AGTAGCATGGAAGTAGGAAG+TGG | 0.553313 | 8.4:+49476550 | MS.gene38951:CDS |
| ACACAAAGATTTGCTTTCCC+GGG | 0.556553 | 8.4:+49476453 | MS.gene38951:CDS |
| TTTACCGGAAACTAGTGATA+GGG | 0.559975 | 8.4:+49475628 | MS.gene38951:CDS |
| GAAGGAATTATTGCATAGGT+GGG | 0.560436 | 8.4:+49475508 | MS.gene38951:CDS |
| TCAAGATATATATGCCTCGT+TGG | 0.560933 | 8.4:+49477437 | MS.gene38951:CDS |
| TATTCCGATGCCAAGTAGCA+TGG | 0.561626 | 8.4:+49476537 | MS.gene38951:CDS |
| TTCCCGGGTTTCAATCCTTG+AGG | 0.561883 | 8.4:+49476468 | MS.gene38951:CDS |
| CATCCTCAAGGATTGAAACC+CGG | 0.563868 | 8.4:-49476471 | None:intergenic |
| AAGCAAATAAGGTTGACGGT+AGG | 0.567979 | 8.4:+49476509 | MS.gene38951:CDS |
| AGAAAATGATGATGGGATGA+AGG | 0.570797 | 8.4:+49476714 | MS.gene38951:CDS |
| ATTCCACTACCCCTTCAAAA+CGG | 0.572945 | 8.4:-49478290 | None:intergenic |
| CAACCCAGTTCGAAGACCAC+TGG | 0.574509 | 8.4:+49478075 | MS.gene38951:CDS |
| CATGATGAAGTTCGAAAACA+TGG | 0.575114 | 8.4:+49477221 | MS.gene38951:CDS |
| ATATCCTCATATCATCCTCA+AGG | 0.575345 | 8.4:-49476483 | None:intergenic |
| TATGGCTGAACATCAAAGGT+TGG | 0.580692 | 8.4:+49476423 | MS.gene38951:CDS |
| AGATGAGTTGCGTGTTGCCG+GGG | 0.584197 | 8.4:+49477031 | MS.gene38951:CDS |
| AGTAGCTTGGGATTTAGAGT+AGG | 0.584499 | 8.4:+49475536 | MS.gene38951:CDS |
| TTGGTCCAATTGTTAATGCG+TGG | 0.585880 | 8.4:-49476131 | None:intergenic |
| ACTTCCATGCTACTTGGCAT+CGG | 0.586687 | 8.4:-49476541 | None:intergenic |
| AGAAGATAAAGACAATGGGA+TGG | 0.587623 | 8.4:+49476777 | MS.gene38951:CDS |
| TATTGAAGGAATTATTGCAT+AGG | 0.587809 | 8.4:+49475504 | MS.gene38951:CDS |
| CTGAAGGACGTAAACTCCAA+TGG | 0.587862 | 8.4:+49477401 | MS.gene38951:CDS |
| AATTGAAAATCTTAGTAGTG+CGG | 0.588744 | 8.4:+49475898 | MS.gene38951:CDS |
| GAAGGTTGATGATGAAGATG+TGG | 0.591676 | 8.4:+49476732 | MS.gene38951:CDS |
| TAGTGTACATTCTAAGCTGA+AGG | 0.592478 | 8.4:+49475700 | MS.gene38951:CDS |
| AACAATTGGACCAAAGTGGA+TGG | 0.592872 | 8.4:+49476140 | MS.gene38951:CDS |
| GAAAAGCAGAAGAAAATGAT+GGG | 0.594943 | 8.4:+49476641 | MS.gene38951:CDS |
| CAGTGGTCTTCGAACTGGGT+TGG | 0.595890 | 8.4:-49478074 | None:intergenic |
| ATGCATGAAGGCGAGGAAGT+GGG | 0.596800 | 8.4:+49477064 | MS.gene38951:CDS |
| TAACCGATCAATAAATCCGC+GGG | 0.596912 | 8.4:-49480131 | None:intergenic |
| GATTTAAAGGCACATCCTGA+AGG | 0.597377 | 8.4:+49477385 | MS.gene38951:CDS |
| CATTAACAATTGGACCAAAG+TGG | 0.599981 | 8.4:+49476136 | MS.gene38951:CDS |
| TCAATACCTGCAATACGGCT+GGG | 0.600754 | 8.4:-49475973 | None:intergenic |
| TGATGAAGATGTTGGTGAAG+AGG | 0.600999 | 8.4:+49476675 | MS.gene38951:CDS |
| CCACTGGACATGTTACGTGT+TGG | 0.601741 | 8.4:+49478091 | MS.gene38951:CDS |
| ACGTGTTGGACCATAGGAAG+AGG | 0.602868 | 8.4:+49478105 | MS.gene38951:CDS |
| TAGAGTAGGCGTTAGGACTG+TGG | 0.605350 | 8.4:+49475550 | MS.gene38951:CDS |
| ATGCCAAGTAGCATGGAAGT+AGG | 0.607349 | 8.4:+49476544 | MS.gene38951:CDS |
| TTGTCTAGAATGTTGATGAG+TGG | 0.608942 | 8.4:+49477567 | MS.gene38951:intron |
| GGAAGTGGGTCAAAACATGT+AGG | 0.610645 | 8.4:+49476565 | MS.gene38951:CDS |
| TGGAAGAAGAAAATGATGAT+GGG | 0.616216 | 8.4:+49476707 | MS.gene38951:CDS |
| CCAAGACACTTGAGGCGTTG+CGG | 0.618422 | 8.4:+49477461 | MS.gene38951:CDS |
| GGTTCCAACACAACAAGACA+TGG | 0.619501 | 8.4:+49476315 | MS.gene38951:CDS |
| TGGGATGGTGAAGCAAAATG+GGG | 0.623459 | 8.4:+49478533 | MS.gene38951:CDS |
| TGATGGGTTGAAAAGTGAGG+CGG | 0.624829 | 8.4:+49476618 | MS.gene38951:CDS |
| GCAGCGTTTGGATAATGCAA+TGG | 0.628794 | 8.4:+49478175 | MS.gene38951:CDS |
| GTCATTTGATTAGATATGGG+CGG | 0.632926 | 8.4:+49476067 | MS.gene38951:intron |
| CAATTTCACTGCGAATCCGA+AGG | 0.633824 | 8.4:-49480043 | None:intergenic |
| GCTGAAGGTCCTTCAAGAAG+GGG | 0.635073 | 8.4:+49475715 | MS.gene38951:CDS |
| AAGTACTTGGAGTTGTGGGA+TGG | 0.635913 | 8.4:+49478518 | MS.gene38951:CDS |
| AAGGTTGATGATGAAGATGT+GGG | 0.641554 | 8.4:+49476733 | MS.gene38951:CDS |
| AAGTTGGATGATGAAGATGT+TGG | 0.645218 | 8.4:+49476667 | MS.gene38951:CDS |
| ATTATCCAAACGCTGCCTTG+AGG | 0.647660 | 8.4:-49478168 | None:intergenic |
| CGGAAAATATAACACACACA+AGG | 0.655010 | 8.4:-49475777 | None:intergenic |
| ACAGTGAAAGAAATGCCTCA+AGG | 0.655287 | 8.4:+49478153 | MS.gene38951:CDS |
| AGATTGATGCGGATAATGAT+GGG | 0.662184 | 8.4:+49476602 | MS.gene38951:CDS |
| TAATGATGGGTTGAAAAGTG+AGG | 0.663934 | 8.4:+49476615 | MS.gene38951:CDS |
| AATTGGACCAAAGTGGATGG+AGG | 0.668982 | 8.4:+49476143 | MS.gene38951:CDS |
| GTAGCATGGAAGTAGGAAGT+GGG | 0.674257 | 8.4:+49476551 | MS.gene38951:CDS |
| TCGTTGGACCAAGACACTTG+AGG | 0.677045 | 8.4:+49477453 | MS.gene38951:CDS |
| GAACATTTATCCCTAACCAG+TGG | 0.678694 | 8.4:+49476092 | MS.gene38951:CDS |
| GCTCTTAGTACCTATAATTG+GGG | 0.679670 | 8.4:+49475854 | MS.gene38951:CDS |
| TTAACCGATCAATAAATCCG+CGG | 0.698985 | 8.4:-49480132 | None:intergenic |
| ATATCCACAAGATATCGGAA+CGG | 0.702922 | 8.4:-49475452 | None:intergenic |
| CCAACACGTAACATGTCCAG+TGG | 0.705795 | 8.4:-49478091 | None:intergenic |
| GTAAACTCCAATGGACTGAG+CGG | 0.711805 | 8.4:+49477410 | MS.gene38951:CDS |
| TCAAGTGTCTTGGTCCAACG+AGG | 0.711931 | 8.4:-49477451 | None:intergenic |
| AGATACTGCAAAGATACCCG+CGG | 0.714457 | 8.4:+49480115 | MS.gene38951:CDS |
| GGGATGGTGAAGCAAAATGG+GGG | 0.720669 | 8.4:+49478534 | MS.gene38951:CDS |
| AAAGTGTAGTAAGATTGATG+CGG | 0.726301 | 8.4:+49476591 | MS.gene38951:CDS |
| TCTACCAACTTATTAGTACG+GGG | 0.745691 | 8.4:-49475380 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCTAAATTAAAACAAAAA+AGG | - | chr8.4:49477119-49477138 | None:intergenic | 10.0% |
| !! | ACTAAATACTAATATATTAT+GGG | + | chr8.4:49479967-49479986 | MS.gene38951:intron | 10.0% |
| !! | TACTAAATACTAATATATTA+TGG | + | chr8.4:49479966-49479985 | MS.gene38951:intron | 10.0% |
| !! | TATTTAATCGTAAAATAAAT+TGG | - | chr8.4:49478829-49478848 | None:intergenic | 10.0% |
| !!! | TTTTATTTTTTTAAAGTGTT+TGG | + | chr8.4:49479750-49479769 | MS.gene38951:intron | 10.0% |
| !!! | TTTTCATTTAAAAAAAATTG+AGG | - | chr8.4:49479267-49479286 | None:intergenic | 10.0% |
| !! | ACATAAATAAAAGTAAGTAA+TGG | - | chr8.4:49477161-49477180 | None:intergenic | 15.0% |
| !! | ATTAAAACAAAAAAGGTTAA+CGG | - | chr8.4:49477112-49477131 | None:intergenic | 15.0% |
| !! | CTAAATACTAATATATTATG+GGG | + | chr8.4:49479968-49479987 | MS.gene38951:intron | 15.0% |
| !!! | AACTCTTAAATAAATTGTTT+TGG | + | chr8.4:49478205-49478224 | MS.gene38951:intron | 15.0% |
| !!! | AATTTTGTCAGATTATTTTT+CGG | + | chr8.4:49477259-49477278 | MS.gene38951:CDS | 15.0% |
| !! | ACCAACTAATCATATTAAAT+AGG | - | chr8.4:49476286-49476305 | None:intergenic | 20.0% |
| !! | ACCTATTTAATATGATTAGT+TGG | + | chr8.4:49476282-49476301 | MS.gene38951:intron | 20.0% |
| !! | ATATTTGAATTGACAGAATA+AGG | + | chr8.4:49477686-49477705 | MS.gene38951:intron | 20.0% |
| !! | ATTATAATTAATGTTAGGCA+TGG | - | chr8.4:49477345-49477364 | None:intergenic | 20.0% |
| !! | CTGCAATTATAATTAATGTT+AGG | - | chr8.4:49477350-49477369 | None:intergenic | 20.0% |
| !! | TATTTGACAGGAATAAAAAT+GGG | - | chr8.4:49479096-49479115 | None:intergenic | 20.0% |
| !! | TCATTGACATCAAATTTATT+AGG | - | chr8.4:49477973-49477992 | None:intergenic | 20.0% |
| !! | TCGTTTGAAAATAAAATCAT+GGG | + | chr8.4:49479876-49479895 | MS.gene38951:intron | 20.0% |
| !! | TGATATATTACTTGTGTATA+GGG | + | chr8.4:49478434-49478453 | MS.gene38951:intron | 20.0% |
| !! | TTAATATAACTGTGTGATTT+CGG | - | chr8.4:49475800-49475819 | None:intergenic | 20.0% |
| !! | TTAATTATAATTGCAGTTTG+AGG | + | chr8.4:49477354-49477373 | MS.gene38951:intron | 20.0% |
| !! | TTATAATTAATGTTAGGCAT+GGG | - | chr8.4:49477344-49477363 | None:intergenic | 20.0% |
| !! | TTCAACAATCAATTTCATAT+AGG | - | chr8.4:49479192-49479211 | None:intergenic | 20.0% |
| !! | TTGATATATTACTTGTGTAT+AGG | + | chr8.4:49478433-49478452 | MS.gene38951:intron | 20.0% |
| !!! | ATGATTTTATTTTCAAACGA+GGG | - | chr8.4:49479876-49479895 | None:intergenic | 20.0% |
| !!! | ATTTGTCATTTGATTAGATA+TGG | + | chr8.4:49476063-49476082 | MS.gene38951:intron | 20.0% |
| !!! | CAAGAATTATTTTCTTTTGT+CGG | + | chr8.4:49479307-49479326 | MS.gene38951:intron | 20.0% |
| !!! | TTTGTCATTTGATTAGATAT+GGG | + | chr8.4:49476064-49476083 | MS.gene38951:intron | 20.0% |
| !!! | TTTTATTTATGTATTGCCTT+AGG | + | chr8.4:49477169-49477188 | MS.gene38951:intron | 20.0% |
| ! | AAAACAAAACTCGCAAAATT+AGG | - | chr8.4:49477932-49477951 | None:intergenic | 25.0% |
| ! | AAACAAAACTCGCAAAATTA+GGG | - | chr8.4:49477931-49477950 | None:intergenic | 25.0% |
| ! | AACAATCAATTTCATATAGG+AGG | - | chr8.4:49479189-49479208 | None:intergenic | 25.0% |
| ! | AATATTCAATACCTGCAATA+CGG | - | chr8.4:49475981-49476000 | None:intergenic | 25.0% |
| ! | AATGAATGGTACTTTATTGA+AGG | + | chr8.4:49475490-49475509 | MS.gene38951:CDS | 25.0% |
| ! | AATTAGAATTGTTAAGACTC+AGG | + | chr8.4:49478780-49478799 | MS.gene38951:intron | 25.0% |
| ! | AATTGAAAATCTTAGTAGTG+CGG | + | chr8.4:49475898-49475917 | MS.gene38951:CDS | 25.0% |
| ! | ACAAAGATCTAGATGTTTAA+AGG | - | chr8.4:49475576-49475595 | None:intergenic | 25.0% |
| ! | AGTATATTAACTCGGTAAAT+GGG | + | chr8.4:49476219-49476238 | MS.gene38951:intron | 25.0% |
| ! | ATACTCTAATGAAAGAAAAC+AGG | - | chr8.4:49477642-49477661 | None:intergenic | 25.0% |
| ! | ATTCCAACATTTATATTCCT+GGG | + | chr8.4:49479647-49479666 | MS.gene38951:intron | 25.0% |
| ! | ATTTACCAAAGCAACAAAAT+TGG | + | chr8.4:49478379-49478398 | MS.gene38951:CDS | 25.0% |
| ! | CAACAGTATTCATTCATTAA+TGG | - | chr8.4:49475330-49475349 | None:intergenic | 25.0% |
| ! | CCCTTATAATTCCAAAAATA+CGG | - | chr8.4:49478914-49478933 | None:intergenic | 25.0% |
| ! | CTATTTGACAGGAATAAAAA+TGG | - | chr8.4:49479097-49479116 | None:intergenic | 25.0% |
| ! | CTCGTTTGAAAATAAAATCA+TGG | + | chr8.4:49479875-49479894 | MS.gene38951:intron | 25.0% |
| ! | GAATGTTGTATCTATTGTTT+GGG | + | chr8.4:49478868-49478887 | MS.gene38951:intron | 25.0% |
| ! | GAGGATATTAAAAGCAAATA+AGG | + | chr8.4:49476498-49476517 | MS.gene38951:CDS | 25.0% |
| ! | TAAAATTGAAACCCAAGAAT+AGG | - | chr8.4:49479735-49479754 | None:intergenic | 25.0% |
| ! | TAAACATCTAGATCTTTGTT+TGG | + | chr8.4:49475577-49475596 | MS.gene38951:CDS | 25.0% |
| ! | TAGTATATTAACTCGGTAAA+TGG | + | chr8.4:49476218-49476237 | MS.gene38951:intron | 25.0% |
| ! | TATCTACCAACTTATTAGTA+CGG | - | chr8.4:49475385-49475404 | None:intergenic | 25.0% |
| ! | TATTGAAGGAATTATTGCAT+AGG | + | chr8.4:49475504-49475523 | MS.gene38951:CDS | 25.0% |
| ! | TCAAATATAGAGAATAATGC+TGG | + | chr8.4:49477761-49477780 | MS.gene38951:intron | 25.0% |
| ! | TGAATGTTGTATCTATTGTT+TGG | + | chr8.4:49478867-49478886 | MS.gene38951:intron | 25.0% |
| ! | TGTTCAATAGTATAATTCCT+GGG | - | chr8.4:49479595-49479614 | None:intergenic | 25.0% |
| ! | TTAAAAGCAAATAAGGTTGA+CGG | + | chr8.4:49476505-49476524 | MS.gene38951:CDS | 25.0% |
| ! | TTACCGAGTTAATATACTAA+AGG | - | chr8.4:49476217-49476236 | None:intergenic | 25.0% |
| ! | TTGCCTTTAGTATATTAACT+CGG | + | chr8.4:49476211-49476230 | MS.gene38951:intron | 25.0% |
| ! | TTGTTCAATAGTATAATTCC+TGG | - | chr8.4:49479596-49479615 | None:intergenic | 25.0% |
| !! | ATTTTCACAGAAATTTACCT+GGG | - | chr8.4:49479137-49479156 | None:intergenic | 25.0% |
| !! | CATTTTTATTCCTGTCAAAT+AGG | + | chr8.4:49479095-49479114 | MS.gene38951:intron | 25.0% |
| !! | GATAATTTTCTTTGTTCCAT+TGG | + | chr8.4:49479331-49479350 | MS.gene38951:intron | 25.0% |
| !! | GCTTTCAGTTTTCAATATAT+TGG | - | chr8.4:49478760-49478779 | None:intergenic | 25.0% |
| !! | TTAATATGATTAGTTGGTTG+AGG | + | chr8.4:49476288-49476307 | MS.gene38951:intron | 25.0% |
| !!! | AACTGTCATTATTTTTTTCC+TGG | - | chr8.4:49479048-49479067 | None:intergenic | 25.0% |
| !!! | ACTGTCATTATTTTTTTCCT+GGG | - | chr8.4:49479047-49479066 | None:intergenic | 25.0% |
| !!! | CATGATTTTATTTTCAAACG+AGG | - | chr8.4:49479877-49479896 | None:intergenic | 25.0% |
| !!! | CCGTATTTTTGGAATTATAA+GGG | + | chr8.4:49478911-49478930 | MS.gene38951:intron | 25.0% |
| !!! | CGTATTTTTGGAATTATAAG+GGG | + | chr8.4:49478912-49478931 | MS.gene38951:intron | 25.0% |
| !!! | GCAGGTATTGAATATTAAAT+GGG | + | chr8.4:49475985-49476004 | MS.gene38951:intron | 25.0% |
| !!! | TAATTCCTGGGAATTTTTTA+TGG | - | chr8.4:49479583-49479602 | None:intergenic | 25.0% |
| !!! | TGCAGGTATTGAATATTAAA+TGG | + | chr8.4:49475984-49476003 | MS.gene38951:intron | 25.0% |
| !!! | TTTTTTTAGTGTGTTATGTG+AGG | + | chr8.4:49477007-49477026 | MS.gene38951:intron | 25.0% |
| AAAGTGTAGTAAGATTGATG+CGG | + | chr8.4:49476591-49476610 | MS.gene38951:CDS | 30.0% | |
| AACAAAACTCGCAAAATTAG+GGG | - | chr8.4:49477930-49477949 | None:intergenic | 30.0% | |
| AACTAACTGCATTTACTTAC+AGG | + | chr8.4:49480013-49480032 | MS.gene38951:intron | 30.0% | |
| AAGACCTATATAGGAATGAA+TGG | + | chr8.4:49475476-49475495 | MS.gene38951:CDS | 30.0% | |
| AAGCATTACCAATGAATAGT+CGG | - | chr8.4:49478573-49478592 | None:intergenic | 30.0% | |
| AAGCTTGCACATCAAAAAAA+GGG | - | chr8.4:49476402-49476421 | None:intergenic | 30.0% | |
| AATAAAAATGGGCAAAACGT+GGG | - | chr8.4:49479085-49479104 | None:intergenic | 30.0% | |
| AATAAAGGAGCGAACAATAA+TGG | + | chr8.4:49478318-49478337 | MS.gene38951:CDS | 30.0% | |
| AATAGGATTCCCAACATTTA+GGG | - | chr8.4:49479718-49479737 | None:intergenic | 30.0% | |
| ACTGTGTATAAAACATTTCC+TGG | - | chr8.4:49479921-49479940 | None:intergenic | 30.0% | |
| AGATATGTTGGAATCTTCTT+TGG | + | chr8.4:49478341-49478360 | MS.gene38951:CDS | 30.0% | |
| AGGGTTACAAAATTAATACC+TGG | - | chr8.4:49479683-49479702 | None:intergenic | 30.0% | |
| AGTACCATTCATTCCTATAT+AGG | - | chr8.4:49475483-49475502 | None:intergenic | 30.0% | |
| AGTCATCATTATGATGTTGT+AGG | + | chr8.4:49477518-49477537 | MS.gene38951:intron | 30.0% | |
| ATAGAAGTCCAAACTCAATT+GGG | - | chr8.4:49479364-49479383 | None:intergenic | 30.0% | |
| ATCTACCAACTTATTAGTAC+GGG | - | chr8.4:49475384-49475403 | None:intergenic | 30.0% | |
| ATGGAAGAAGATAAAGACAA+TGG | + | chr8.4:49476772-49476791 | MS.gene38951:CDS | 30.0% | |
| CAATTAATCATCATTGACAG+CGG | + | chr8.4:49478674-49478693 | MS.gene38951:intron | 30.0% | |
| CCAGCAATATTAATAACCTA+AGG | - | chr8.4:49477188-49477207 | None:intergenic | 30.0% | |
| CCTTAGGTTATTAATATTGC+TGG | + | chr8.4:49477185-49477204 | MS.gene38951:intron | 30.0% | |
| GAAAAGCAGAAGAAAATGAT+GGG | + | chr8.4:49476641-49476660 | MS.gene38951:CDS | 30.0% | |
| GAATTACATATGCCATTGTT+TGG | + | chr8.4:49478981-49479000 | MS.gene38951:intron | 30.0% | |
| GATACAGTTATACACATTTC+TGG | + | chr8.4:49475947-49475966 | MS.gene38951:CDS | 30.0% | |
| GATTCCAACATTTATATTCC+TGG | + | chr8.4:49479646-49479665 | MS.gene38951:intron | 30.0% | |
| GCAATTAGGCTGTATATTTA+GGG | - | chr8.4:49478728-49478747 | None:intergenic | 30.0% | |
| GGAACAAAAAAAATATGCCT+AGG | + | chr8.4:49479010-49479029 | MS.gene38951:intron | 30.0% | |
| GGGTGAAGAAGAAAAAAAAA+TGG | + | chr8.4:49476753-49476772 | MS.gene38951:CDS | 30.0% | |
| GGGTTACAAAATTAATACCT+GGG | - | chr8.4:49479682-49479701 | None:intergenic | 30.0% | |
| GGTATATGTTCTTAAGTACT+TGG | + | chr8.4:49478505-49478524 | MS.gene38951:CDS | 30.0% | |
| TAAAGGTTGAATACACATCA+CGG | - | chr8.4:49477317-49477336 | None:intergenic | 30.0% | |
| TAACCTTCGCATTTGAAAAA+AGG | - | chr8.4:49476187-49476206 | None:intergenic | 30.0% | |
| TAAGCTTGCACATCAAAAAA+AGG | - | chr8.4:49476403-49476422 | None:intergenic | 30.0% | |
| TATATTTCATTCCGATCTCA+CGG | + | chr8.4:49479835-49479854 | MS.gene38951:intron | 30.0% | |
| TCTTCATATCCACAAGATAT+CGG | - | chr8.4:49475460-49475479 | None:intergenic | 30.0% | |
| TGCAATTAGGCTGTATATTT+AGG | - | chr8.4:49478729-49478748 | None:intergenic | 30.0% | |
| TGCAGTATCTAATACAAATC+TGG | - | chr8.4:49480105-49480124 | None:intergenic | 30.0% | |
| TGGAAGAAGAAAATGATGAT+GGG | + | chr8.4:49476707-49476726 | MS.gene38951:CDS | 30.0% | |
| TGGAAGAAGATAAAGACAAT+GGG | + | chr8.4:49476773-49476792 | MS.gene38951:CDS | 30.0% | |
| TGGCTGAAAAGGAAAAAAAA+AGG | + | chr8.4:49476818-49476837 | MS.gene38951:CDS | 30.0% | |
| TGGTGAAGAGGAAAAAAAAT+TGG | + | chr8.4:49476687-49476706 | MS.gene38951:CDS | 30.0% | |
| TGTAAGTAAATGCAGTTAGT+TGG | - | chr8.4:49480014-49480033 | None:intergenic | 30.0% | |
| TGTGTAAGTTATTTGTTTCC+AGG | + | chr8.4:49479900-49479919 | MS.gene38951:intron | 30.0% | |
| TTATACACAGTAACACACAT+TGG | + | chr8.4:49479930-49479949 | MS.gene38951:intron | 30.0% | |
| TTATTCCTGTCAAATAGGAT+GGG | + | chr8.4:49479100-49479119 | MS.gene38951:intron | 30.0% | |
| TTGGAAGAAGAAAATGATGA+TGG | + | chr8.4:49476706-49476725 | MS.gene38951:CDS | 30.0% | |
| TTTATTCCTGTCAAATAGGA+TGG | + | chr8.4:49479099-49479118 | MS.gene38951:intron | 30.0% | |
| TTTATTCTGCACACATGAAA+AGG | + | chr8.4:49476876-49476895 | MS.gene38951:CDS | 30.0% | |
| TTTCCCAGGAATATAAATGT+TGG | - | chr8.4:49479653-49479672 | None:intergenic | 30.0% | |
| ! | AAATTTTGCAGTCATGATTG+TGG | + | chr8.4:49478482-49478501 | MS.gene38951:intron | 30.0% |
| ! | AATGTTGGAATCTTATTTCC+AGG | - | chr8.4:49479638-49479657 | None:intergenic | 30.0% |
| ! | AATTTTGCAGTCATGATTGT+GGG | + | chr8.4:49478483-49478502 | MS.gene38951:intron | 30.0% |
| ! | CTGTATCATTCTTTTGTTGA+TGG | - | chr8.4:49475934-49475953 | None:intergenic | 30.0% |
| ! | GAACAATAATGGAGATATGT+TGG | + | chr8.4:49478329-49478348 | MS.gene38951:CDS | 30.0% |
| ! | GATTTTCACAGAAATTTACC+TGG | - | chr8.4:49479138-49479157 | None:intergenic | 30.0% |
| ! | GTAGTGGAATTGATGAATAA+AGG | + | chr8.4:49478303-49478322 | MS.gene38951:CDS | 30.0% |
| ! | TTTTGATGTGCAAGCTTATA+TGG | + | chr8.4:49476405-49476424 | MS.gene38951:CDS | 30.0% |
| !! | ACTAACCAATTTTGTTGCTT+TGG | - | chr8.4:49478387-49478406 | None:intergenic | 30.0% |
| !! | CTATTGTTTGGGTTTTTAAC+TGG | + | chr8.4:49478879-49478898 | MS.gene38951:intron | 30.0% |
| !! | TGAGGTAGTTGATGATTTAA+AGG | + | chr8.4:49477372-49477391 | MS.gene38951:CDS | 30.0% |
| !! | TGTCAGATTATTTTTCGGTA+CGG | + | chr8.4:49477264-49477283 | MS.gene38951:intron | 30.0% |
| !! | TGTTATGTTAATTTGTTCCC+AGG | + | chr8.4:49478946-49478965 | MS.gene38951:intron | 30.0% |
| !! | TTTATTTTCAAACGAGGGTT+GGG | - | chr8.4:49479871-49479890 | None:intergenic | 30.0% |
| !!! | AAACCTTTTTTCAAATGCGA+AGG | + | chr8.4:49476181-49476200 | MS.gene38951:CDS | 30.0% |
| !!! | AACTACATTTTTTCATGTCG+CGG | + | chr8.4:49476938-49476957 | MS.gene38951:intron | 30.0% |
| !!! | AGGAGTTTGCTGATTTATTT+TGG | + | chr8.4:49477706-49477725 | MS.gene38951:intron | 30.0% |
| !!! | CACTTTTTTCTACAATTTCC+TGG | + | chr8.4:49479617-49479636 | MS.gene38951:intron | 30.0% |
| !!! | CATTGTGGTTTTGTCTATAT+GGG | + | chr8.4:49477820-49477839 | MS.gene38951:intron | 30.0% |
| !!! | GACTTCTATGCATTGATTTT+GGG | + | chr8.4:49479375-49479394 | MS.gene38951:intron | 30.0% |
| !!! | GCCGTATTTTTGGAATTATA+AGG | + | chr8.4:49478910-49478929 | MS.gene38951:intron | 30.0% |
| !!! | TTTTATTTTCAAACGAGGGT+TGG | - | chr8.4:49479872-49479891 | None:intergenic | 30.0% |
| AAGATTGATGCGGATAATGA+TGG | + | chr8.4:49476601-49476620 | MS.gene38951:CDS | 35.0% | |
| AAGTTGGATGATGAAGATGT+TGG | + | chr8.4:49476667-49476686 | MS.gene38951:CDS | 35.0% | |
| AATGTTGGGAATCCTATTCT+TGG | + | chr8.4:49479720-49479739 | MS.gene38951:intron | 35.0% | |
| AATTCCAACCTTAGATTCCT+GGG | - | chr8.4:49478966-49478985 | None:intergenic | 35.0% | |
| ACAGGATTTAGAAATGTCGA+TGG | + | chr8.4:49479520-49479539 | MS.gene38951:intron | 35.0% | |
| ACCAACTTGAGAATGGTTAA+CGG | - | chr8.4:49476362-49476381 | None:intergenic | 35.0% | |
| ACGCTCTTAGTACCTATAAT+TGG | + | chr8.4:49475852-49475871 | MS.gene38951:CDS | 35.0% | |
| AGAAGATAAAGACAATGGGA+TGG | + | chr8.4:49476777-49476796 | MS.gene38951:CDS | 35.0% | |
| AGATTGATGCGGATAATGAT+GGG | + | chr8.4:49476602-49476621 | MS.gene38951:CDS | 35.0% | |
| AGCATTACCAATGAATAGTC+GGG | - | chr8.4:49478572-49478591 | None:intergenic | 35.0% | |
| AGGTGTAGATGATTTCTGAT+TGG | + | chr8.4:49477538-49477557 | MS.gene38951:intron | 35.0% | |
| AGGTTATTAATATTGCTGGC+AGG | + | chr8.4:49477189-49477208 | MS.gene38951:intron | 35.0% | |
| ATATAGGAGGTGATAAGCAT+TGG | - | chr8.4:49479176-49479195 | None:intergenic | 35.0% | |
| ATATCCACAAGATATCGGAA+CGG | - | chr8.4:49475455-49475474 | None:intergenic | 35.0% | |
| ATATCCTCATATCATCCTCA+AGG | - | chr8.4:49476486-49476505 | None:intergenic | 35.0% | |
| ATATGCCATTGTTTGGTAGA+TGG | + | chr8.4:49478988-49479007 | MS.gene38951:intron | 35.0% | |
| ATATTTCATTCCGATCTCAC+GGG | + | chr8.4:49479836-49479855 | MS.gene38951:intron | 35.0% | |
| ATGTTGGGAATCCTATTCTT+GGG | + | chr8.4:49479721-49479740 | MS.gene38951:intron | 35.0% | |
| ATTGGATGTCTACTGCAATT+AGG | - | chr8.4:49478742-49478761 | None:intergenic | 35.0% | |
| CATAGAAGTCCAAACTCAAT+TGG | - | chr8.4:49479365-49479384 | None:intergenic | 35.0% | |
| CATGATGAAGTTCGAAAACA+TGG | + | chr8.4:49477221-49477240 | MS.gene38951:CDS | 35.0% | |
| CATTAACAATTGGACCAAAG+TGG | + | chr8.4:49476136-49476155 | MS.gene38951:CDS | 35.0% | |
| CCTAGGAATAAATTATACCC+AGG | + | chr8.4:49479027-49479046 | MS.gene38951:intron | 35.0% | |
| CCTGGGTATAATTTATTCCT+AGG | - | chr8.4:49479030-49479049 | None:intergenic | 35.0% | |
| CGCTCTTAGTACCTATAATT+GGG | + | chr8.4:49475853-49475872 | MS.gene38951:CDS | 35.0% | |
| CGGAAAATATAACACACACA+AGG | - | chr8.4:49475780-49475799 | None:intergenic | 35.0% | |
| CTCTACCTAAAATTCCCTTT+AGG | + | chr8.4:49477785-49477804 | MS.gene38951:intron | 35.0% | |
| CTTATATGGCTGAACATCAA+AGG | + | chr8.4:49476419-49476438 | MS.gene38951:CDS | 35.0% | |
| GAAGGAATTATTGCATAGGT+GGG | + | chr8.4:49475508-49475527 | MS.gene38951:CDS | 35.0% | |
| GAATAAAAATGGGCAAAACG+TGG | - | chr8.4:49479086-49479105 | None:intergenic | 35.0% | |
| GAATAGGATTCCCAACATTT+AGG | - | chr8.4:49479719-49479738 | None:intergenic | 35.0% | |
| GAGGGAAAACAAACGAAAAA+GGG | + | chr8.4:49475232-49475251 | MS.gene38951:CDS | 35.0% | |
| GCAAAATTAGGGGTTACAAT+AGG | - | chr8.4:49477920-49477939 | None:intergenic | 35.0% | |
| GCTCTTAGTACCTATAATTG+GGG | + | chr8.4:49475854-49475873 | MS.gene38951:CDS | 35.0% | |
| GGAAAAGCAGAAGAAAATGA+TGG | + | chr8.4:49476640-49476659 | MS.gene38951:CDS | 35.0% | |
| GGGTTTGTGTTGTATTAGTT+CGG | + | chr8.4:49477840-49477859 | MS.gene38951:intron | 35.0% | |
| GTAATACAAGAAAGAGAACC+TGG | + | chr8.4:49479424-49479443 | MS.gene38951:intron | 35.0% | |
| GTCATTTGATTAGATATGGG+CGG | + | chr8.4:49476067-49476086 | MS.gene38951:intron | 35.0% | |
| GTGGATATGAAGACCTATAT+AGG | + | chr8.4:49475467-49475486 | MS.gene38951:CDS | 35.0% | |
| GTTAACATGTGTAACATTCC+CGG | + | chr8.4:49479772-49479791 | MS.gene38951:intron | 35.0% | |
| TAACTGCATTTACTTACAGG+AGG | + | chr8.4:49480016-49480035 | MS.gene38951:intron | 35.0% | |
| TAATTCCAACCTTAGATTCC+TGG | - | chr8.4:49478967-49478986 | None:intergenic | 35.0% | |
| TAGAAGTCCAAACTCAATTG+GGG | - | chr8.4:49479363-49479382 | None:intergenic | 35.0% | |
| TAGAATTGTTAAGACTCAGG+TGG | + | chr8.4:49478783-49478802 | MS.gene38951:intron | 35.0% | |
| TAGTGTACATTCTAAGCTGA+AGG | + | chr8.4:49475700-49475719 | MS.gene38951:CDS | 35.0% | |
| TATGCCATTGTTTGGTAGAT+GGG | + | chr8.4:49478989-49479008 | MS.gene38951:intron | 35.0% | |
| TATGTTGGAATCTTCTTTGG+AGG | + | chr8.4:49478344-49478363 | MS.gene38951:CDS | 35.0% | |
| TCAAGATATATATGCCTCGT+TGG | + | chr8.4:49477437-49477456 | MS.gene38951:CDS | 35.0% | |
| TCAATTGGGGAAAATTCCAA+TGG | - | chr8.4:49479350-49479369 | None:intergenic | 35.0% | |
| TCATGCCATAAAAAATTCCC+AGG | + | chr8.4:49479575-49479594 | MS.gene38951:intron | 35.0% | |
| TCTACCAACTTATTAGTACG+GGG | - | chr8.4:49475383-49475402 | None:intergenic | 35.0% | |
| TCTTAAGTACTTGGAGTTGT+GGG | + | chr8.4:49478514-49478533 | MS.gene38951:CDS | 35.0% | |
| TGAAGGAATTATTGCATAGG+TGG | + | chr8.4:49475507-49475526 | MS.gene38951:CDS | 35.0% | |
| TGAGGGAAAACAAACGAAAA+AGG | + | chr8.4:49475231-49475250 | MS.gene38951:CDS | 35.0% | |
| TGTTAGGCATGGGATAATAA+AGG | - | chr8.4:49477334-49477353 | None:intergenic | 35.0% | |
| TTAACATGTGTAACATTCCC+GGG | + | chr8.4:49479773-49479792 | MS.gene38951:intron | 35.0% | |
| TTAACCGATCAATAAATCCG+CGG | - | chr8.4:49480135-49480154 | None:intergenic | 35.0% | |
| TTACACATCCCTTTCCATAT+TGG | - | chr8.4:49479408-49479427 | None:intergenic | 35.0% | |
| TTCTTAAGTACTTGGAGTTG+TGG | + | chr8.4:49478513-49478532 | MS.gene38951:CDS | 35.0% | |
| TTGTGTTGTATTAGTTCGGT+GGG | + | chr8.4:49477844-49477863 | MS.gene38951:intron | 35.0% | |
| TTTACCGGAAACTAGTGATA+GGG | + | chr8.4:49475628-49475647 | MS.gene38951:CDS | 35.0% | |
| TTTGTGTTGTATTAGTTCGG+TGG | + | chr8.4:49477843-49477862 | MS.gene38951:intron | 35.0% | |
| ! | AAATGTCGATGGTATTGAGA+GGG | + | chr8.4:49479531-49479550 | MS.gene38951:intron | 35.0% |
| ! | AACACAAAGATTTGCTTTCC+CGG | + | chr8.4:49476452-49476471 | MS.gene38951:CDS | 35.0% |
| ! | AATTTGTTCCCAGGAATCTA+AGG | + | chr8.4:49478955-49478974 | MS.gene38951:intron | 35.0% |
| ! | AGAAAATGATGGGATGAAGT+TGG | + | chr8.4:49476651-49476670 | MS.gene38951:CDS | 35.0% |
| ! | ATTTTGCAGTCATGATTGTG+GGG | + | chr8.4:49478484-49478503 | MS.gene38951:intron | 35.0% |
| ! | GAATTTTCCCCAATTGAGTT+TGG | + | chr8.4:49479353-49479372 | MS.gene38951:intron | 35.0% |
| ! | GTTTTCCACGCATTAACAAT+TGG | + | chr8.4:49476126-49476145 | MS.gene38951:CDS | 35.0% |
| ! | GTTTTGTGTGGTTTTTTGTG+CGG | + | chr8.4:49477873-49477892 | MS.gene38951:intron | 35.0% |
| ! | TGATGATGATATGGCTGAAA+AGG | + | chr8.4:49476807-49476826 | MS.gene38951:CDS | 35.0% |
| ! | TGTCTAGAATGTTGATGAGT+GGG | + | chr8.4:49477568-49477587 | MS.gene38951:intron | 35.0% |
| ! | TTACAGAAAGTCCGTTTTGA+AGG | + | chr8.4:49478279-49478298 | MS.gene38951:intron | 35.0% |
| ! | TTATTTTCAAACGAGGGTTG+GGG | - | chr8.4:49479870-49479889 | None:intergenic | 35.0% |
| ! | TTGTCTAGAATGTTGATGAG+TGG | + | chr8.4:49477567-49477586 | MS.gene38951:intron | 35.0% |
| ! | TTTTGTGTGGTTTTTTGTGC+GGG | + | chr8.4:49477874-49477893 | MS.gene38951:intron | 35.0% |
| !! | AACCATTCTCAAGTTGGTAT+TGG | + | chr8.4:49476364-49476383 | MS.gene38951:CDS | 35.0% |
| !! | AAGGTTGATGATGAAGATGT+GGG | + | chr8.4:49476733-49476752 | MS.gene38951:CDS | 35.0% |
| !! | AGAAAATGATGATGGGATGA+AGG | + | chr8.4:49476714-49476733 | MS.gene38951:CDS | 35.0% |
| !! | AGGTGATAAGCATTGGTTAA+GGG | - | chr8.4:49479169-49479188 | None:intergenic | 35.0% |
| !! | CTAGATCTTTGTTTGGCTTT+AGG | + | chr8.4:49475584-49475603 | MS.gene38951:CDS | 35.0% |
| !! | TAATGATGGGTTGAAAAGTG+AGG | + | chr8.4:49476615-49476634 | MS.gene38951:CDS | 35.0% |
| !! | TACAGAAAGTCCGTTTTGAA+GGG | + | chr8.4:49478280-49478299 | MS.gene38951:intron | 35.0% |
| !! | TATTGTAGGAGAGTGTTTAC+CGG | + | chr8.4:49475613-49475632 | MS.gene38951:CDS | 35.0% |
| !! | TTGTTTGGGTTTTTAACTGG+AGG | + | chr8.4:49478882-49478901 | MS.gene38951:intron | 35.0% |
| !! | TTTTCCATGTCTTGTTGTGT+TGG | - | chr8.4:49476322-49476341 | None:intergenic | 35.0% |
| !!! | ACTACATTTTTTCATGTCGC+GGG | + | chr8.4:49476939-49476958 | MS.gene38951:intron | 35.0% |
| !!! | ATGCATTGATTTTGGGATGA+TGG | + | chr8.4:49479382-49479401 | MS.gene38951:intron | 35.0% |
| !!! | CGAATTTGTTTTATGCAACG+TGG | + | chr8.4:49478015-49478034 | MS.gene38951:intron | 35.0% |
| !!! | GCATTGTGGTTTTGTCTATA+TGG | + | chr8.4:49477819-49477838 | MS.gene38951:intron | 35.0% |
| !!! | GGACTTCTATGCATTGATTT+TGG | + | chr8.4:49479374-49479393 | MS.gene38951:intron | 35.0% |
| AAAACGCTTAATTGGACCAC+TGG | - | chr8.4:49476111-49476130 | None:intergenic | 40.0% | |
| AACAAACGCACCCTAAATGT+TGG | + | chr8.4:49479705-49479724 | MS.gene38951:intron | 40.0% | |
| AACAATTGGACCAAAGTGGA+TGG | + | chr8.4:49476140-49476159 | MS.gene38951:CDS | 40.0% | |
| AACAGCAACACCCCAATTAT+AGG | - | chr8.4:49475867-49475886 | None:intergenic | 40.0% | |
| AAGAAAACAGGCAGTGATGA+AGG | - | chr8.4:49477630-49477649 | None:intergenic | 40.0% | |
| AAGCAAATAAGGTTGACGGT+AGG | + | chr8.4:49476509-49476528 | MS.gene38951:CDS | 40.0% | |
| AATGCCCCGTACTAATAAGT+TGG | + | chr8.4:49475376-49475395 | MS.gene38951:CDS | 40.0% | |
| ACAAACGCACCCTAAATGTT+GGG | + | chr8.4:49479706-49479725 | MS.gene38951:intron | 40.0% | |
| ACAGTGAAAGAAATGCCTCA+AGG | + | chr8.4:49478153-49478172 | MS.gene38951:CDS | 40.0% | |
| ACTTACAGGAGGATATCCTT+CGG | + | chr8.4:49480027-49480046 | MS.gene38951:intron | 40.0% | |
| ACTTTCCCATCCTATTTGAC+AGG | - | chr8.4:49479108-49479127 | None:intergenic | 40.0% | |
| AGCAAATAAGGTTGACGGTA+GGG | + | chr8.4:49476510-49476529 | MS.gene38951:CDS | 40.0% | |
| AGTTTAGGCTCTTCATCAAC+AGG | + | chr8.4:49479502-49479521 | MS.gene38951:intron | 40.0% | |
| ATACCCGCGGATTTATTGAT+CGG | + | chr8.4:49480128-49480147 | MS.gene38951:CDS | 40.0% | |
| ATGCGTGGAAAACGCTTAAT+TGG | - | chr8.4:49476119-49476138 | None:intergenic | 40.0% | |
| ATTCCACTACCCCTTCAAAA+CGG | - | chr8.4:49478293-49478312 | None:intergenic | 40.0% | |
| CAATCCTTGAGGATGATATG+AGG | + | chr8.4:49476479-49476498 | MS.gene38951:CDS | 40.0% | |
| CAGTGAAATTGTTTGTCGTC+TGG | + | chr8.4:49480055-49480074 | MS.gene38951:CDS | 40.0% | |
| CATACATTGTCCTCTTCCTA+TGG | - | chr8.4:49478118-49478137 | None:intergenic | 40.0% | |
| CGAAAAAGGGATTGTGTTGT+TGG | + | chr8.4:49475245-49475264 | MS.gene38951:CDS | 40.0% | |
| CTAAAATTCCCTTTAGGCAG+TGG | + | chr8.4:49477791-49477810 | MS.gene38951:intron | 40.0% | |
| CTCAGGAAGGATTAGAGTTT+AGG | + | chr8.4:49479487-49479506 | MS.gene38951:intron | 40.0% | |
| CTCCAATACCAACTTGAGAA+TGG | - | chr8.4:49476369-49476388 | None:intergenic | 40.0% | |
| GAACATTTATCCCTAACCAG+TGG | + | chr8.4:49476092-49476111 | MS.gene38951:CDS | 40.0% | |
| GCTGTATATTTAGGGAATGC+GGG | - | chr8.4:49478720-49478739 | None:intergenic | 40.0% | |
| GGAAAAAATTCCCGTGAGAT+CGG | - | chr8.4:49479849-49479868 | None:intergenic | 40.0% | |
| GGCATTTGAGTCTTTATCTG+TGG | - | chr8.4:49475362-49475381 | None:intergenic | 40.0% | |
| GGCTGTATATTTAGGGAATG+CGG | - | chr8.4:49478721-49478740 | None:intergenic | 40.0% | |
| GGTAAACACTCTCCTACAAT+AGG | - | chr8.4:49475614-49475633 | None:intergenic | 40.0% | |
| GTTTACCGGAAACTAGTGAT+AGG | + | chr8.4:49475627-49475646 | MS.gene38951:CDS | 40.0% | |
| TAAAGACAATGGGATGGAGT+TGG | + | chr8.4:49476783-49476802 | MS.gene38951:CDS | 40.0% | |
| TAACCGATCAATAAATCCGC+GGG | - | chr8.4:49480134-49480153 | None:intergenic | 40.0% | |
| TATGGCTGAACATCAAAGGT+TGG | + | chr8.4:49476423-49476442 | MS.gene38951:CDS | 40.0% | |
| TGTTCCCATCTACCAAACAA+TGG | - | chr8.4:49478996-49479015 | None:intergenic | 40.0% | |
| TTGGTCCAATTGTTAATGCG+TGG | - | chr8.4:49476134-49476153 | None:intergenic | 40.0% | |
| TTTGCGCATCAGACAATGTT+CGG | - | chr8.4:49475412-49475431 | None:intergenic | 40.0% | |
| ! | AATCCTTCCTGAGTTCTAGT+CGG | - | chr8.4:49479480-49479499 | None:intergenic | 40.0% |
| ! | AATGTCGATGGTATTGAGAG+GGG | + | chr8.4:49479532-49479551 | MS.gene38951:intron | 40.0% |
| ! | ACACAAAGATTTGCTTTCCC+GGG | + | chr8.4:49476453-49476472 | MS.gene38951:CDS | 40.0% |
| ! | AGTAGCTTGGGATTTAGAGT+AGG | + | chr8.4:49475536-49475555 | MS.gene38951:CDS | 40.0% |
| ! | ATCTTCTTTGGAGGTTGTAG+TGG | + | chr8.4:49478353-49478372 | MS.gene38951:CDS | 40.0% |
| ! | ATTTAGGGTGCGTTTGTTTG+AGG | - | chr8.4:49479703-49479722 | None:intergenic | 40.0% |
| ! | CACTGCCTAAAGGGAATTTT+AGG | - | chr8.4:49477793-49477812 | None:intergenic | 40.0% |
| ! | CTAACCCTATCACTAGTTTC+CGG | - | chr8.4:49475635-49475654 | None:intergenic | 40.0% |
| ! | CTTAATTGGACCACTGGTTA+GGG | - | chr8.4:49476105-49476124 | None:intergenic | 40.0% |
| ! | GAAATGTCGATGGTATTGAG+AGG | + | chr8.4:49479530-49479549 | MS.gene38951:intron | 40.0% |
| ! | GATGATGGCCAATATGGAAA+GGG | + | chr8.4:49479397-49479416 | MS.gene38951:intron | 40.0% |
| ! | GATTTAAAGGCACATCCTGA+AGG | + | chr8.4:49477385-49477404 | MS.gene38951:CDS | 40.0% |
| ! | GCTTTAGGTTTGCCTATTGT+AGG | + | chr8.4:49475599-49475618 | MS.gene38951:CDS | 40.0% |
| ! | GGAGTTGGATGATGATGATA+TGG | + | chr8.4:49476798-49476817 | MS.gene38951:CDS | 40.0% |
| ! | GGAGTTTTTCCAATGCATGA+AGG | + | chr8.4:49477052-49477071 | MS.gene38951:CDS | 40.0% |
| ! | TGATGAAGATGTTGGTGAAG+AGG | + | chr8.4:49476675-49476694 | MS.gene38951:CDS | 40.0% |
| ! | TGATTAGTTGGTTGAGGACT+TGG | + | chr8.4:49476294-49476313 | MS.gene38951:intron | 40.0% |
| ! | TGTGTTGTATTAGTTCGGTG+GGG | + | chr8.4:49477845-49477864 | MS.gene38951:intron | 40.0% |
| ! | TTTAGGGTGCGTTTGTTTGA+GGG | - | chr8.4:49479702-49479721 | None:intergenic | 40.0% |
| !! | GAAGGTTGATGATGAAGATG+TGG | + | chr8.4:49476732-49476751 | MS.gene38951:CDS | 40.0% |
| !! | GAGGTGATAAGCATTGGTTA+AGG | - | chr8.4:49479170-49479189 | None:intergenic | 40.0% |
| !!! | ACAGAAAGTCCGTTTTGAAG+GGG | + | chr8.4:49478281-49478300 | MS.gene38951:intron | 40.0% |
| !!! | GATGGGAAAGTTTTATTCCC+AGG | + | chr8.4:49479117-49479136 | MS.gene38951:intron | 40.0% |
| !!! | TTTGTGTGGTTTTTTGTGCG+GGG | + | chr8.4:49477875-49477894 | MS.gene38951:intron | 40.0% |
| !!! | TTTTGGGATGATGGCCAATA+TGG | + | chr8.4:49479391-49479410 | MS.gene38951:intron | 40.0% |
| AACATGACCTCCATCCACTT+TGG | - | chr8.4:49476153-49476172 | None:intergenic | 45.0% | |
| AACTCCGTTCCGATATCTTG+TGG | + | chr8.4:49475448-49475467 | MS.gene38951:CDS | 45.0% | |
| AAGCTGAAGGTCCTTCAAGA+AGG | + | chr8.4:49475713-49475732 | MS.gene38951:CDS | 45.0% | |
| AAGTACTTGGAGTTGTGGGA+TGG | + | chr8.4:49478518-49478537 | MS.gene38951:CDS | 45.0% | |
| AATTGGACCAAAGTGGATGG+AGG | + | chr8.4:49476143-49476162 | MS.gene38951:CDS | 45.0% | |
| ACACTCCTACAACTAAGTCC+CGG | - | chr8.4:49479794-49479813 | None:intergenic | 45.0% | |
| AGATACTGCAAAGATACCCG+CGG | + | chr8.4:49480115-49480134 | MS.gene38951:CDS | 45.0% | |
| AGCTGAAGGTCCTTCAAGAA+GGG | + | chr8.4:49475714-49475733 | MS.gene38951:CDS | 45.0% | |
| AGTAGCATGGAAGTAGGAAG+TGG | + | chr8.4:49476550-49476569 | MS.gene38951:CDS | 45.0% | |
| ATCCTCAAGGATTGAAACCC+GGG | - | chr8.4:49476473-49476492 | None:intergenic | 45.0% | |
| ATGCCAAATCCACTGCCTAA+AGG | - | chr8.4:49477803-49477822 | None:intergenic | 45.0% | |
| ATGCCAAGTAGCATGGAAGT+AGG | + | chr8.4:49476544-49476563 | MS.gene38951:CDS | 45.0% | |
| ATTATCCAAACGCTGCCTTG+AGG | - | chr8.4:49478171-49478190 | None:intergenic | 45.0% | |
| CAATTTCACTGCGAATCCGA+AGG | - | chr8.4:49480046-49480065 | None:intergenic | 45.0% | |
| CATCCTCAAGGATTGAAACC+CGG | - | chr8.4:49476474-49476493 | None:intergenic | 45.0% | |
| CATGCATTGGAAAAACTCCC+CGG | - | chr8.4:49477051-49477070 | None:intergenic | 45.0% | |
| CATGTTACGTGTTGGACCAT+AGG | + | chr8.4:49478099-49478118 | MS.gene38951:CDS | 45.0% | |
| CATTGGAGTTTACGTCCTTC+AGG | - | chr8.4:49477403-49477422 | None:intergenic | 45.0% | |
| CTGAAGGACGTAAACTCCAA+TGG | + | chr8.4:49477401-49477420 | MS.gene38951:CDS | 45.0% | |
| CTTCCTACTTCCATGCTACT+TGG | - | chr8.4:49476550-49476569 | None:intergenic | 45.0% | |
| GAAGAGGACAATGTATGTGC+TGG | + | chr8.4:49478121-49478140 | MS.gene38951:CDS | 45.0% | |
| GAGTATGCCCGACTATTCAT+TGG | + | chr8.4:49478562-49478581 | MS.gene38951:CDS | 45.0% | |
| GCAGCGTTTGGATAATGCAA+TGG | + | chr8.4:49478175-49478194 | MS.gene38951:CDS | 45.0% | |
| GCCGTTAACCATTCTCAAGT+TGG | + | chr8.4:49476358-49476377 | MS.gene38951:CDS | 45.0% | |
| GGAAGTGGGTCAAAACATGT+AGG | + | chr8.4:49476565-49476584 | MS.gene38951:CDS | 45.0% | |
| GGTTCCAACACAACAAGACA+TGG | + | chr8.4:49476315-49476334 | MS.gene38951:CDS | 45.0% | |
| GTAGCATGGAAGTAGGAAGT+GGG | + | chr8.4:49476551-49476570 | MS.gene38951:CDS | 45.0% | |
| GTATATTTAGGGAATGCGGG+AGG | - | chr8.4:49478717-49478736 | None:intergenic | 45.0% | |
| GTGGGATGGTGAAGCAAAAT+GGG | + | chr8.4:49478532-49478551 | MS.gene38951:CDS | 45.0% | |
| TAATCCCTGCTAGACAAACC+AGG | - | chr8.4:49479445-49479464 | None:intergenic | 45.0% | |
| TATTCCGATGCCAAGTAGCA+TGG | + | chr8.4:49476537-49476556 | MS.gene38951:CDS | 45.0% | |
| TCAATACCTGCAATACGGCT+GGG | - | chr8.4:49475976-49475995 | None:intergenic | 45.0% | |
| TGAATTTCCGCTCAGTCCAT+TGG | - | chr8.4:49477420-49477439 | None:intergenic | 45.0% | |
| TGCCAAATCCACTGCCTAAA+GGG | - | chr8.4:49477802-49477821 | None:intergenic | 45.0% | |
| TGGGATGGTGAAGCAAAATG+GGG | + | chr8.4:49478533-49478552 | MS.gene38951:CDS | 45.0% | |
| TGTGGGATGGTGAAGCAAAA+TGG | + | chr8.4:49478531-49478550 | MS.gene38951:CDS | 45.0% | |
| TTCAATACCTGCAATACGGC+TGG | - | chr8.4:49475977-49475996 | None:intergenic | 45.0% | |
| ! | ACTTCCATGCTACTTGGCAT+CGG | - | chr8.4:49476544-49476563 | None:intergenic | 45.0% |
| ! | AGAACCTGGTTTGTCTAGCA+GGG | + | chr8.4:49479438-49479457 | MS.gene38951:intron | 45.0% |
| ! | GCTTAATTGGACCACTGGTT+AGG | - | chr8.4:49476106-49476125 | None:intergenic | 45.0% |
| ! | GGATGATGGCCAATATGGAA+AGG | + | chr8.4:49479396-49479415 | MS.gene38951:intron | 45.0% |
| ! | GTGTTGTATTAGTTCGGTGG+GGG | + | chr8.4:49477846-49477865 | MS.gene38951:intron | 45.0% |
| ! | TGGGATTTAGAGTAGGCGTT+AGG | + | chr8.4:49475543-49475562 | MS.gene38951:CDS | 45.0% |
| ! | TGTTCCCAGGAATCTAAGGT+TGG | + | chr8.4:49478959-49478978 | MS.gene38951:intron | 45.0% |
| ! | TGTTGTATTAGTTCGGTGGG+GGG | + | chr8.4:49477847-49477866 | MS.gene38951:intron | 45.0% |
| ! | TTCCCTTTAGGCAGTGGATT+TGG | + | chr8.4:49477797-49477816 | MS.gene38951:intron | 45.0% |
| ! | TTCTTTGGAGGTTGTAGTGG+TGG | + | chr8.4:49478356-49478375 | MS.gene38951:CDS | 45.0% |
| ! | TTTTCCAATGCATGAAGGCG+AGG | + | chr8.4:49477057-49477076 | MS.gene38951:CDS | 45.0% |
| !! | GCATTGGTTAAGGGCAGAAT+TGG | - | chr8.4:49479160-49479179 | None:intergenic | 45.0% |
| !! | GTAAACTCCAATGGACTGAG+CGG | + | chr8.4:49477410-49477429 | MS.gene38951:CDS | 45.0% |
| !! | TGATGGGTTGAAAAGTGAGG+CGG | + | chr8.4:49476618-49476637 | MS.gene38951:CDS | 45.0% |
| !! | AAATTTAAAAATTTCAAATT+AGG | - | chr8.4:49478468-49478487 | None:intergenic | 5.0% |
| !!! | TAAATTTTATCATTAAAATT+AGG | + | chr8.4:49478043-49478062 | MS.gene38951:intron | 5.0% |
| AAATGCCTCAAGGCAGCGTT+TGG | + | chr8.4:49478163-49478182 | MS.gene38951:CDS | 50.0% | |
| AATGCATGAAGGCGAGGAAG+TGG | + | chr8.4:49477063-49477082 | MS.gene38951:CDS | 50.0% | |
| ACGTGTTGGACCATAGGAAG+AGG | + | chr8.4:49478105-49478124 | MS.gene38951:CDS | 50.0% | |
| ACTTCCTCGCCTTCATGCAT+TGG | - | chr8.4:49477064-49477083 | None:intergenic | 50.0% | |
| AGGTGGGATGCAAGTAGCTT+GGG | + | chr8.4:49475524-49475543 | MS.gene38951:CDS | 50.0% | |
| ATGCATGAAGGCGAGGAAGT+GGG | + | chr8.4:49477064-49477083 | MS.gene38951:CDS | 50.0% | |
| ATGTCCAGTGGTCTTCGAAC+TGG | - | chr8.4:49478082-49478101 | None:intergenic | 50.0% | |
| CACTCCTACAACTAAGTCCC+GGG | - | chr8.4:49479793-49479812 | None:intergenic | 50.0% | |
| CATTCCCGGGACTTAGTTGT+AGG | + | chr8.4:49479786-49479805 | MS.gene38951:intron | 50.0% | |
| CCAACACGTAACATGTCCAG+TGG | - | chr8.4:49478094-49478113 | None:intergenic | 50.0% | |
| CCACTGGACATGTTACGTGT+TGG | + | chr8.4:49478091-49478110 | MS.gene38951:CDS | 50.0% | |
| CTACGTTGTCCCCTTCTTGA+AGG | - | chr8.4:49475727-49475746 | None:intergenic | 50.0% | |
| GCAAAACGTGGGTCAAACGT+CGG | - | chr8.4:49479074-49479093 | None:intergenic | 50.0% | |
| GCGGGGTTTACGCTTATGTT+TGG | + | chr8.4:49477892-49477911 | MS.gene38951:intron | 50.0% | |
| GCTGAAGGTCCTTCAAGAAG+GGG | + | chr8.4:49475715-49475734 | MS.gene38951:CDS | 50.0% | |
| GGGACTTAGTTGTAGGAGTG+TGG | + | chr8.4:49479793-49479812 | MS.gene38951:intron | 50.0% | |
| GGGATGGTGAAGCAAAATGG+GGG | + | chr8.4:49478534-49478553 | MS.gene38951:CDS | 50.0% | |
| GTAGATGAGTTGCGTGTTGC+CGG | + | chr8.4:49477029-49477048 | MS.gene38951:CDS | 50.0% | |
| TAGAGTAGGCGTTAGGACTG+TGG | + | chr8.4:49475550-49475569 | MS.gene38951:CDS | 50.0% | |
| TAGATGAGTTGCGTGTTGCC+GGG | + | chr8.4:49477030-49477049 | MS.gene38951:CDS | 50.0% | |
| TAGGTGGGATGCAAGTAGCT+TGG | + | chr8.4:49475523-49475542 | MS.gene38951:CDS | 50.0% | |
| TATTAGGCAGAGTCGTCGCA+AGG | - | chr8.4:49477957-49477976 | None:intergenic | 50.0% | |
| TCAAGTGTCTTGGTCCAACG+AGG | - | chr8.4:49477454-49477473 | None:intergenic | 50.0% | |
| TCGTTGGACCAAGACACTTG+AGG | + | chr8.4:49477453-49477472 | MS.gene38951:CDS | 50.0% | |
| TGTCCAGTGGTCTTCGAACT+GGG | - | chr8.4:49478081-49478100 | None:intergenic | 50.0% | |
| TTCCCGGGTTTCAATCCTTG+AGG | + | chr8.4:49476468-49476487 | MS.gene38951:CDS | 50.0% | |
| TTCCTGGGAAAGCTAATCCC+AGG | + | chr8.4:49479662-49479681 | MS.gene38951:intron | 50.0% | |
| ! | ACACCGACTAGAACTCAGGA+AGG | + | chr8.4:49479474-49479493 | MS.gene38951:intron | 50.0% |
| ! | AGGCAGTGGATTTGGCATTG+TGG | + | chr8.4:49477805-49477824 | MS.gene38951:intron | 50.0% |
| ! | ATCCACACCGACTAGAACTC+AGG | + | chr8.4:49479470-49479489 | MS.gene38951:intron | 50.0% |
| ! | GAGAACCTGGTTTGTCTAGC+AGG | + | chr8.4:49479437-49479456 | MS.gene38951:intron | 50.0% |
| ! | TTCCTGAGTTCTAGTCGGTG+TGG | - | chr8.4:49479475-49479494 | None:intergenic | 50.0% |
| !! | GATGGGTTGAAAAGTGAGGC+GGG | + | chr8.4:49476619-49476638 | MS.gene38951:CDS | 50.0% |
| !! | GGAGGAGTGTGCCGTATTTT+TGG | + | chr8.4:49478900-49478919 | MS.gene38951:intron | 50.0% |
| !! | TACCTGGGATTAGCTTTCCC+AGG | - | chr8.4:49479667-49479686 | None:intergenic | 50.0% |
| !!! | AGTCCGTTTTGAAGGGGTAG+TGG | + | chr8.4:49478287-49478306 | MS.gene38951:CDS | 50.0% |
| AGATGAGTTGCGTGTTGCCG+GGG | + | chr8.4:49477031-49477050 | MS.gene38951:CDS | 55.0% | |
| CAACCCAGTTCGAAGACCAC+TGG | + | chr8.4:49478075-49478094 | MS.gene38951:CDS | 55.0% | |
| CAGTGGTCTTCGAACTGGGT+TGG | - | chr8.4:49478077-49478096 | None:intergenic | 55.0% | |
| ! | GTATTAGTTCGGTGGGGGGT+TGG | + | chr8.4:49477851-49477870 | MS.gene38951:intron | 55.0% |
| !! | CCAAGACACTTGAGGCGTTG+CGG | + | chr8.4:49477461-49477480 | MS.gene38951:CDS | 55.0% |
| CCGCAACGCCTCAAGTGTCT+TGG | - | chr8.4:49477464-49477483 | None:intergenic | 60.0% | |
| TGGTTGCCCAGCCGTATTGC+AGG | + | chr8.4:49475967-49475986 | MS.gene38951:CDS | 60.0% | |
| !!! | GGTGGGGGGTTGGTTTTGTG+TGG | + | chr8.4:49477861-49477880 | MS.gene38951:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 49475230 | 49480154 | 49475230 | ID=MS.gene38951 |
| chr8.4 | mRNA | 49475230 | 49480154 | 49475230 | ID=MS.gene38951.t1;Parent=MS.gene38951 |
| chr8.4 | exon | 49475230 | 49475268 | 49475230 | ID=MS.gene38951.t1.exon1;Parent=MS.gene38951.t1 |
| chr8.4 | CDS | 49475230 | 49475268 | 49475230 | ID=cds.MS.gene38951.t1;Parent=MS.gene38951.t1 |
| chr8.4 | exon | 49475359 | 49475988 | 49475359 | ID=MS.gene38951.t1.exon2;Parent=MS.gene38951.t1 |
| chr8.4 | CDS | 49475359 | 49475988 | 49475359 | ID=cds.MS.gene38951.t1;Parent=MS.gene38951.t1 |
| chr8.4 | exon | 49476080 | 49476202 | 49476080 | ID=MS.gene38951.t1.exon3;Parent=MS.gene38951.t1 |
| chr8.4 | CDS | 49476080 | 49476202 | 49476080 | ID=cds.MS.gene38951.t1;Parent=MS.gene38951.t1 |
| chr8.4 | exon | 49476301 | 49476908 | 49476301 | ID=MS.gene38951.t1.exon4;Parent=MS.gene38951.t1 |
| chr8.4 | CDS | 49476301 | 49476908 | 49476301 | ID=cds.MS.gene38951.t1;Parent=MS.gene38951.t1 |
| chr8.4 | exon | 49477016 | 49477097 | 49477016 | ID=MS.gene38951.t1.exon5;Parent=MS.gene38951.t1 |
| chr8.4 | CDS | 49477016 | 49477097 | 49477016 | ID=cds.MS.gene38951.t1;Parent=MS.gene38951.t1 |
| chr8.4 | exon | 49477191 | 49477280 | 49477191 | ID=MS.gene38951.t1.exon6;Parent=MS.gene38951.t1 |
| chr8.4 | CDS | 49477191 | 49477280 | 49477191 | ID=cds.MS.gene38951.t1;Parent=MS.gene38951.t1 |
| chr8.4 | exon | 49477370 | 49477495 | 49477370 | ID=MS.gene38951.t1.exon7;Parent=MS.gene38951.t1 |
| chr8.4 | CDS | 49477370 | 49477495 | 49477370 | ID=cds.MS.gene38951.t1;Parent=MS.gene38951.t1 |
| chr8.4 | exon | 49477575 | 49477589 | 49477575 | ID=MS.gene38951.t1.exon8;Parent=MS.gene38951.t1 |
| chr8.4 | CDS | 49477575 | 49477589 | 49477575 | ID=cds.MS.gene38951.t1;Parent=MS.gene38951.t1 |
| chr8.4 | exon | 49478065 | 49478196 | 49478065 | ID=MS.gene38951.t1.exon9;Parent=MS.gene38951.t1 |
| chr8.4 | CDS | 49478065 | 49478196 | 49478065 | ID=cds.MS.gene38951.t1;Parent=MS.gene38951.t1 |
| chr8.4 | exon | 49478285 | 49478400 | 49478285 | ID=MS.gene38951.t1.exon10;Parent=MS.gene38951.t1 |
| chr8.4 | CDS | 49478285 | 49478400 | 49478285 | ID=cds.MS.gene38951.t1;Parent=MS.gene38951.t1 |
| chr8.4 | exon | 49478493 | 49478583 | 49478493 | ID=MS.gene38951.t1.exon11;Parent=MS.gene38951.t1 |
| chr8.4 | CDS | 49478493 | 49478583 | 49478493 | ID=cds.MS.gene38951.t1;Parent=MS.gene38951.t1 |
| chr8.4 | exon | 49480035 | 49480154 | 49480035 | ID=MS.gene38951.t1.exon12;Parent=MS.gene38951.t1 |
| chr8.4 | CDS | 49480035 | 49480154 | 49480035 | ID=cds.MS.gene38951.t1;Parent=MS.gene38951.t1 |
| Gene Sequence |
| Protein sequence |
