Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39422.t1 | XP_013457082.1 | 98.2 | 655 | 12 | 0 | 1 | 655 | 1 | 655 | 0.00E+00 | 1077.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39422.t1 | Q9C950 | 62.2 | 666 | 218 | 12 | 1 | 655 | 1 | 643 | 9.7e-182 | 638.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39422.t1 | A0A072UPW1 | 98.2 | 655 | 12 | 0 | 1 | 655 | 1 | 655 | 0.0e+00 | 1077.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene64820 | MS.gene39422 | PPI |
| MS.gene67685 | MS.gene39422 | PPI |
| MS.gene063673 | MS.gene39422 | PPI |
| MS.gene67503 | MS.gene39422 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39422.t1 | MTR_4g089070 | 98.931 | 655 | 7 | 0 | 1 | 655 | 1 | 655 | 0.0 | 1309 |
| MS.gene39422.t1 | MTR_7g099060 | 69.681 | 564 | 158 | 5 | 94 | 655 | 72 | 624 | 0.0 | 728 |
| MS.gene39422.t1 | MTR_4g032885 | 49.852 | 676 | 289 | 15 | 1 | 655 | 1 | 647 | 0.0 | 569 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39422.t1 | AT1G61040 | 64.394 | 660 | 213 | 10 | 1 | 655 | 1 | 643 | 0.0 | 725 |
| MS.gene39422.t1 | AT1G61040 | 64.394 | 660 | 213 | 10 | 1 | 655 | 1 | 643 | 0.0 | 725 |
| MS.gene39422.t1 | AT1G61040 | 64.394 | 660 | 213 | 10 | 1 | 655 | 1 | 643 | 0.0 | 725 |
Find 180 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGAGGGGCTATCCTTTC+AGG | 0.171046 | 4.2:-21898534 | MS.gene39422:CDS |
| GAAACTTGCTAAATGGTTTA+TGG | 0.190102 | 4.2:-21898483 | MS.gene39422:CDS |
| TTCATTTAATGCTTCATTCT+TGG | 0.222704 | 4.2:+21898790 | None:intergenic |
| CTTGTCCACCTTCTTGAAAA+TGG | 0.242437 | 4.2:+21897801 | None:intergenic |
| AGGAGCTCAGGCAGGATTTA+TGG | 0.245228 | 4.2:-21897499 | MS.gene39422:CDS |
| GTCCAACACATCCTGCTTGC+TGG | 0.246370 | 4.2:+21898172 | None:intergenic |
| CTCAATCTACGGCGAGCTTC+TGG | 0.252204 | 4.2:+21898737 | None:intergenic |
| CTAGACCACTATGGCAGATT+TGG | 0.280131 | 4.2:-21899338 | None:intergenic |
| GCAGGTCGAAACTTGCTAAA+TGG | 0.281288 | 4.2:-21898490 | MS.gene39422:CDS |
| GTCCTTCACCTTTGCATGTC+TGG | 0.302374 | 4.2:+21897938 | None:intergenic |
| ACAAGTATTTGAATGTTGTT+TGG | 0.305232 | 4.2:-21898310 | MS.gene39422:CDS |
| CGGATGGTGGGAGTGATTCT+AGG | 0.310126 | 4.2:-21899219 | MS.gene39422:CDS |
| TTAGCATTACTTCATAAGTA+TGG | 0.312059 | 4.2:-21897531 | MS.gene39422:CDS |
| GATGATGATAGGGCGTTATC+TGG | 0.323109 | 4.2:-21898557 | MS.gene39422:CDS |
| CAAGTATTTGAATGTTGTTT+GGG | 0.325352 | 4.2:-21898309 | MS.gene39422:CDS |
| GCTTTGGTGGGGAAAAGTTC+CGG | 0.327559 | 4.2:+21898690 | None:intergenic |
| AAAGGACGATAAAAGTTTAC+TGG | 0.334647 | 4.2:-21898924 | MS.gene39422:CDS |
| TTCAGCCAGCTTCAGAGCTT+TGG | 0.335439 | 4.2:+21897914 | None:intergenic |
| GGAATATAAGCAGTGGGTTA+AGG | 0.335444 | 4.2:-21898222 | MS.gene39422:CDS |
| GGCCGACAGAGATGATGATT+TGG | 0.344579 | 4.2:-21899113 | MS.gene39422:CDS |
| TGAAGTAATGCTAATGAAAC+TGG | 0.345518 | 4.2:+21897540 | None:intergenic |
| GGATCGATTAAGGAGCGATT+TGG | 0.360135 | 4.2:-21898033 | MS.gene39422:CDS |
| TTCCGGGACCCTGAGCTTCT+AGG | 0.361307 | 4.2:+21898707 | None:intergenic |
| GCAGGAAGAACTGGTGCAGC+TGG | 0.367596 | 4.2:-21899295 | MS.gene39422:CDS |
| GCTATCCTTTCAGGATATAA+AGG | 0.369861 | 4.2:-21898525 | MS.gene39422:CDS |
| TAAATCCTGCCTGAGCTCCT+TGG | 0.376568 | 4.2:+21897502 | None:intergenic |
| TTGGAAGCTGCTGCTGATGC+TGG | 0.377240 | 4.2:-21897633 | MS.gene39422:CDS |
| AGTGATGATGAAGGGTCAAC+TGG | 0.380812 | 4.2:-21898602 | MS.gene39422:CDS |
| AAATCCTGCCTGAGCTCCTT+GGG | 0.381424 | 4.2:+21897503 | None:intergenic |
| TCTAGTTTATACTGTCGATC+AGG | 0.382459 | 4.2:+21898347 | None:intergenic |
| AGATTTGGAAAATTTGCTTT+TGG | 0.383099 | 4.2:-21899323 | MS.gene39422:CDS |
| TCCAACACATCCTGCTTGCT+GGG | 0.387672 | 4.2:+21898173 | None:intergenic |
| GATGCAGGCGCCAACGGAAC+TGG | 0.389784 | 4.2:-21897702 | MS.gene39422:CDS |
| CTGCTGAGAAGGATCGATTA+AGG | 0.390215 | 4.2:-21898043 | MS.gene39422:CDS |
| AGAGAGGCTCCTAGAAGCTC+AGG | 0.394299 | 4.2:-21898716 | MS.gene39422:CDS |
| GGCAAGACTGCTAGAATTAG+AGG | 0.395661 | 4.2:-21897964 | MS.gene39422:CDS |
| CTTTGGTGGGGAAAAGTTCC+GGG | 0.401876 | 4.2:+21898691 | None:intergenic |
| TTCTTCGAGGAGTTGATTGT+TGG | 0.402446 | 4.2:-21898455 | MS.gene39422:CDS |
| TTGGAGGCTGCAGGAAGAAC+TGG | 0.405599 | 4.2:-21899304 | MS.gene39422:CDS |
| CTGGTGCAGCTGGGAGAAAT+CGG | 0.410742 | 4.2:-21899285 | MS.gene39422:CDS |
| ACCCACTTTCACTATCACTA+TGG | 0.416871 | 4.2:+21898630 | None:intergenic |
| GGCTGACCTATCGGCAGATC+TGG | 0.420016 | 4.2:+21898811 | None:intergenic |
| AGATGATGATTTGGGTAGTC+AGG | 0.424756 | 4.2:-21899104 | MS.gene39422:CDS |
| CATCCTGCTTGCTGGGCATC+CGG | 0.425090 | 4.2:+21898180 | None:intergenic |
| GCGCCAGACTCTGCAGTTAC+CGG | 0.428066 | 4.2:+21897675 | None:intergenic |
| ACGACGTGATGGCTCCTATT+CGG | 0.435749 | 4.2:-21899239 | MS.gene39422:CDS |
| TGGTGGAGCCCAAGGAGCTC+AGG | 0.441296 | 4.2:-21897511 | MS.gene39422:CDS |
| TGATTCTAGGGACGATGATT+CGG | 0.441920 | 4.2:-21899206 | MS.gene39422:CDS |
| TTGCTGACAGTGATGATGAT+AGG | 0.449554 | 4.2:-21898568 | MS.gene39422:CDS |
| CAAGAAGGTGGACAAGATCA+AGG | 0.452160 | 4.2:-21897794 | MS.gene39422:CDS |
| GTACCGGTAACTGCAGAGTC+TGG | 0.458427 | 4.2:-21897678 | MS.gene39422:CDS |
| TCAAGAATGCTTCTGAATTG+AGG | 0.460579 | 4.2:-21897863 | MS.gene39422:CDS |
| GCCGACAGAGATGATGATTT+GGG | 0.461153 | 4.2:-21899112 | MS.gene39422:CDS |
| GATGAAGGGTCAACTGGGGA+TGG | 0.465099 | 4.2:-21898596 | MS.gene39422:CDS |
| GGAATCGGTAGATCTAAAAC+TGG | 0.468450 | 4.2:-21898416 | MS.gene39422:CDS |
| GTTGGCTTAGTTTCTGATGC+AGG | 0.468889 | 4.2:-21897717 | MS.gene39422:CDS |
| TTCTGCTGCGAGGTGGCAAA+TGG | 0.472146 | 4.2:-21898276 | MS.gene39422:CDS |
| TTCATTCTTGGCTGACCTAT+CGG | 0.475537 | 4.2:+21898802 | None:intergenic |
| GCTTTAAATAATAATACAGT+TGG | 0.476435 | 4.2:-21897735 | MS.gene39422:CDS |
| CCATTAACCGGTTTAAAAGA+AGG | 0.478030 | 4.2:-21897840 | MS.gene39422:CDS |
| TCTGAATTGAGGCCATTAAC+CGG | 0.478837 | 4.2:-21897852 | MS.gene39422:CDS |
| TTCTCAGCAGCAATATTTAG+CGG | 0.479881 | 4.2:+21898056 | None:intergenic |
| AAGTGGAACGCAGTGGTGGC+CGG | 0.485301 | 4.2:-21898199 | MS.gene39422:CDS |
| CTCCTAGAAGCTCAGGGTCC+CGG | 0.486604 | 4.2:-21898709 | MS.gene39422:CDS |
| ATCACTCCCACCATCCGAAT+AGG | 0.488688 | 4.2:+21899225 | None:intergenic |
| ACGAGTGCTCCGGTGGATCA+AGG | 0.488751 | 4.2:-21897597 | MS.gene39422:CDS |
| TCTAAAGAAAAGATTAGATC+CGG | 0.489106 | 4.2:-21899134 | MS.gene39422:CDS |
| GGTTTAAAAGAAGGGGATGC+AGG | 0.489652 | 4.2:-21897831 | MS.gene39422:CDS |
| GGTGGCTACTGCCATTGCCT+TGG | 0.489865 | 4.2:-21897652 | MS.gene39422:CDS |
| TATGCAAGCAGAAAGCCATC+TGG | 0.492063 | 4.2:-21899169 | MS.gene39422:CDS |
| AACTACTATGTTGCAACACC+TGG | 0.492628 | 4.2:-21897771 | MS.gene39422:CDS |
| TGCTGCTGATGCTGGAAAGT+TGG | 0.493452 | 4.2:-21897625 | MS.gene39422:CDS |
| GGCACTCTCTCCCACCTTCG+AGG | 0.493621 | 4.2:-21899264 | MS.gene39422:CDS |
| TAAGCAGTGGGTTAAGGAAG+TGG | 0.495237 | 4.2:-21898216 | MS.gene39422:CDS |
| ACAATCAACTCCTCGAAGAA+AGG | 0.497411 | 4.2:+21898458 | None:intergenic |
| GATGTGAAAGACCTGCGCTT+TGG | 0.500166 | 4.2:+21898674 | None:intergenic |
| CAGGAAGAAGCAGATGATGA+TGG | 0.500980 | 4.2:-21899085 | MS.gene39422:CDS |
| ATTGCATCAAAGCGTGAGAA+AGG | 0.501489 | 4.2:-21898896 | MS.gene39422:CDS |
| GTTTATGGAGCCTTTCTTCG+AGG | 0.503115 | 4.2:-21898468 | MS.gene39422:CDS |
| TGGCCGGATGCCCAGCAAGC+AGG | 0.503690 | 4.2:-21898183 | MS.gene39422:CDS |
| TGTTGCAACACCTGGTGAAA+AGG | 0.503949 | 4.2:-21897763 | MS.gene39422:CDS |
| GCCCAGCAAGCAGGATGTGT+TGG | 0.504729 | 4.2:-21898174 | MS.gene39422:CDS |
| AAAGGAAAGGCAATACTGAC+TGG | 0.506497 | 4.2:-21898878 | MS.gene39422:CDS |
| CATTAACCGGTTTAAAAGAA+GGG | 0.511793 | 4.2:-21897839 | MS.gene39422:CDS |
| TAAGAACGATGATGCGGAAG+TGG | 0.511893 | 4.2:-21897997 | MS.gene39422:CDS |
| GCTAAATATTGCTGCTGAGA+AGG | 0.511981 | 4.2:-21898054 | MS.gene39422:CDS |
| AGCCATAGTGATAGTGAAAG+TGG | 0.512878 | 4.2:-21898632 | MS.gene39422:CDS |
| GTTGGTTGCTTTGTAAGAGT+TGG | 0.516766 | 4.2:-21898437 | MS.gene39422:CDS |
| AGGGCGTTATCTGGATCTGA+GGG | 0.521599 | 4.2:-21898548 | MS.gene39422:CDS |
| GCCGATGTTTGATTCATCAC+TGG | 0.521821 | 4.2:+21899039 | None:intergenic |
| TTTAAACTCTCGGAAAATGA+TGG | 0.524376 | 4.2:-21897444 | MS.gene39422:CDS |
| TGCTTATATTCCTCTTCAAG+TGG | 0.530910 | 4.2:+21898233 | None:intergenic |
| CGACTCTCCTCCACTTGAAG+AGG | 0.532180 | 4.2:-21898243 | MS.gene39422:CDS |
| GGACGCCAAAGCTCTGAAGC+TGG | 0.533086 | 4.2:-21897919 | MS.gene39422:CDS |
| AACAGTTGGATTTAAACTCT+CGG | 0.535156 | 4.2:-21897454 | MS.gene39422:CDS |
| TCACGTCGTCTCCTCGAAGG+TGG | 0.535504 | 4.2:+21899253 | None:intergenic |
| ACCATGCAGAGCCGATAGAT+AGG | 0.535837 | 4.2:+21898392 | None:intergenic |
| AACTCTCGGAAAATGATGGC+AGG | 0.539618 | 4.2:-21897440 | MS.gene39422:CDS |
| GGAGCCCAAGGAGCTCAGGC+AGG | 0.540666 | 4.2:-21897507 | MS.gene39422:CDS |
| TGCTTTGTAAGAGTTGGAAT+CGG | 0.542888 | 4.2:-21898431 | MS.gene39422:CDS |
| GTTTCTGATGCAGGCGCCAA+CGG | 0.547991 | 4.2:-21897708 | MS.gene39422:CDS |
| GAAGGGTCAACTGGGGATGG+AGG | 0.548587 | 4.2:-21898593 | MS.gene39422:CDS |
| TATTTCCTTTATATCCTGAA+AGG | 0.548926 | 4.2:+21898520 | None:intergenic |
| GTGAAAGACCTGCGCTTTGG+TGG | 0.549040 | 4.2:+21898677 | None:intergenic |
| CTAGTTTATACTGTCGATCA+GGG | 0.549414 | 4.2:+21898348 | None:intergenic |
| AAATCATCATCTCTGTCGGC+CGG | 0.550882 | 4.2:+21899115 | None:intergenic |
| TTGAAGAGGAATATAAGCAG+TGG | 0.551720 | 4.2:-21898229 | MS.gene39422:CDS |
| TAGGAGCCTCTCTCAATCTA+CGG | 0.552930 | 4.2:+21898726 | None:intergenic |
| AGGAAGAAGCAGATGATGAT+GGG | 0.553651 | 4.2:-21899084 | MS.gene39422:CDS |
| CAGGAAGAACTGGTGCAGCT+GGG | 0.554030 | 4.2:-21899294 | MS.gene39422:CDS |
| GGGTCTCACAGTGATGATGA+AGG | 0.555265 | 4.2:-21898611 | MS.gene39422:CDS |
| GATTCCGTCCCTTGATCCAC+CGG | 0.555339 | 4.2:+21897588 | None:intergenic |
| TAAAGGAAATAACTATTCGC+AGG | 0.556325 | 4.2:-21898508 | MS.gene39422:CDS |
| GATGGCTCCTATTCGGATGG+TGG | 0.558557 | 4.2:-21899232 | MS.gene39422:CDS |
| AGAGGAACTTGTGATCCAGA+TGG | 0.558880 | 4.2:+21899154 | None:intergenic |
| CGCCAACGGAACTGGAGTAC+CGG | 0.559046 | 4.2:-21897694 | MS.gene39422:CDS |
| GTGATGATGAAGGGTCAACT+GGG | 0.560268 | 4.2:-21898601 | MS.gene39422:CDS |
| TACCGGTACTCCAGTTCCGT+TGG | 0.560498 | 4.2:+21897692 | None:intergenic |
| AGCATCAGCAGCAGCTTCCA+AGG | 0.560846 | 4.2:+21897635 | None:intergenic |
| CGAGTGCTCCGGTGGATCAA+GGG | 0.561052 | 4.2:-21897596 | MS.gene39422:CDS |
| CATAAGTATGGTGGAGCCCA+AGG | 0.561256 | 4.2:-21897519 | MS.gene39422:CDS |
| ATGGCTCCTATTCGGATGGT+GGG | 0.564678 | 4.2:-21899231 | MS.gene39422:CDS |
| AGCAGCAGCTTCCAAGGCAA+TGG | 0.566339 | 4.2:+21897641 | None:intergenic |
| GGATGGTGGGAGTGATTCTA+GGG | 0.568352 | 4.2:-21899218 | MS.gene39422:CDS |
| ACCTATCTATCGGCTCTGCA+TGG | 0.568699 | 4.2:-21898393 | MS.gene39422:CDS |
| GTTGGTGGATACGAGTGCTC+CGG | 0.569612 | 4.2:-21897607 | MS.gene39422:CDS |
| CTAAAACTGGACCTATCTAT+CGG | 0.572540 | 4.2:-21898403 | MS.gene39422:CDS |
| GGTGATTACAAAAGAAGAAG+AGG | 0.573086 | 4.2:-21897393 | MS.gene39422:CDS |
| CAAAGAATAGAATCAACAGT+TGG | 0.573933 | 4.2:-21897468 | MS.gene39422:CDS |
| TGCTGATGCTGGAAAGTTGG+TGG | 0.573970 | 4.2:-21897622 | MS.gene39422:CDS |
| TGCTGACAGTGATGATGATA+GGG | 0.578323 | 4.2:-21898567 | MS.gene39422:CDS |
| TCTACAAAGACGAAGATGAC+AGG | 0.581505 | 4.2:-21899009 | MS.gene39422:CDS |
| GCATTACTTCATAAGTATGG+TGG | 0.585022 | 4.2:-21897528 | MS.gene39422:CDS |
| AAGGACGATAAAAGTTTACT+GGG | 0.586185 | 4.2:-21898923 | MS.gene39422:CDS |
| TGCGGAAGTGGAGAGGATCA+AGG | 0.587922 | 4.2:-21897985 | MS.gene39422:CDS |
| GGTGGATACGAGTGCTCCGG+TGG | 0.588884 | 4.2:-21897604 | MS.gene39422:CDS |
| TAGGGCGTTATCTGGATCTG+AGG | 0.590534 | 4.2:-21898549 | MS.gene39422:CDS |
| TGAAAGACCTGCGCTTTGGT+GGG | 0.591840 | 4.2:+21898678 | None:intergenic |
| AACTGCAGAGTCTGGCGCGG+TGG | 0.592507 | 4.2:-21897670 | MS.gene39422:CDS |
| CCATCACGTCGTCTCCTCGA+AGG | 0.594280 | 4.2:+21899250 | None:intergenic |
| ACCCAAATCATCATCTCTGT+CGG | 0.596745 | 4.2:+21899111 | None:intergenic |
| ATTAACCGGTTTAAAAGAAG+GGG | 0.598511 | 4.2:-21897838 | MS.gene39422:CDS |
| AATATTTAGCGGCCTTGACG+AGG | 0.600006 | 4.2:+21898067 | None:intergenic |
| GCATGCGAGATGATGAAAGT+GGG | 0.602189 | 4.2:+21898843 | None:intergenic |
| GTCCAGACATGCAAAGGTGA+AGG | 0.602214 | 4.2:-21897940 | MS.gene39422:CDS |
| AAGTATTTGAATGTTGTTTG+GGG | 0.602265 | 4.2:-21898308 | MS.gene39422:CDS |
| TTATATTCCTCTTCAAGTGG+AGG | 0.604750 | 4.2:+21898236 | None:intergenic |
| CGTGATGGCTCCTATTCGGA+TGG | 0.608607 | 4.2:-21899235 | MS.gene39422:CDS |
| GCCATAGTGATAGTGAAAGT+GGG | 0.610393 | 4.2:-21898631 | MS.gene39422:CDS |
| ACGATGATGCGGAAGTGGAG+AGG | 0.611559 | 4.2:-21897992 | MS.gene39422:CDS |
| AGAGGCGTCCAGACATGCAA+AGG | 0.613612 | 4.2:-21897946 | MS.gene39422:CDS |
| CACGTCGTCTCCTCGAAGGT+GGG | 0.620597 | 4.2:+21899254 | None:intergenic |
| CGCATGCGAGATGATGAAAG+TGG | 0.622352 | 4.2:+21898842 | None:intergenic |
| TGAAGAGGAATATAAGCAGT+GGG | 0.622796 | 4.2:-21898228 | MS.gene39422:CDS |
| AAGGAAGTGGAACGCAGTGG+TGG | 0.623967 | 4.2:-21898203 | MS.gene39422:CDS |
| TGCTCCGGTGGATCAAGGGA+CGG | 0.626963 | 4.2:-21897592 | MS.gene39422:CDS |
| ATACTGTCGATCAGGGTCTG+AGG | 0.628006 | 4.2:+21898355 | None:intergenic |
| AGCTCGCCGTAGATTGAGAG+AGG | 0.631416 | 4.2:-21898732 | MS.gene39422:CDS |
| GAAAGACCTGCGCTTTGGTG+GGG | 0.632380 | 4.2:+21898679 | None:intergenic |
| GGTCTCACAGTGATGATGAA+GGG | 0.633397 | 4.2:-21898610 | MS.gene39422:CDS |
| ATGCGAGATGATGAAAGTGG+GGG | 0.633726 | 4.2:+21898845 | None:intergenic |
| TGCGAGATGATGAAAGTGGG+GGG | 0.635142 | 4.2:+21898846 | None:intergenic |
| GAGAGGCTCCTAGAAGCTCA+GGG | 0.641941 | 4.2:-21898715 | MS.gene39422:CDS |
| GATGGGCGAAGCGATCGTGA+AGG | 0.642869 | 4.2:-21899067 | MS.gene39422:CDS |
| CATCTGCCAGATCTGCCGAT+AGG | 0.645205 | 4.2:-21898817 | MS.gene39422:CDS |
| CATGCGAGATGATGAAAGTG+GGG | 0.650744 | 4.2:+21898844 | None:intergenic |
| ATCAAAGCGTGAGAAAGGAA+AGG | 0.653833 | 4.2:-21898891 | MS.gene39422:CDS |
| AGCGATTTGGAAAGAGCACA+AGG | 0.666283 | 4.2:-21898020 | MS.gene39422:CDS |
| ATGAAAGTTCTGCTGCGAGG+TGG | 0.674381 | 4.2:-21898283 | MS.gene39422:CDS |
| CCTTCGAGGAGACGACGTGA+TGG | 0.676596 | 4.2:-21899250 | MS.gene39422:CDS |
| TAAATGAACTGCGTGCAAAG+CGG | 0.683722 | 4.2:-21898775 | MS.gene39422:CDS |
| ACAAGGTAAGAACGATGATG+CGG | 0.686761 | 4.2:-21898003 | MS.gene39422:CDS |
| ACCAGTGATGAATCAAACAT+CGG | 0.693097 | 4.2:-21899040 | MS.gene39422:CDS |
| GGTAACTGCAGAGTCTGGCG+CGG | 0.695507 | 4.2:-21897673 | MS.gene39422:CDS |
| GCGAGATGATGAAAGTGGGG+GGG | 0.695667 | 4.2:+21898847 | None:intergenic |
| GTTAAGGAAGTGGAACGCAG+TGG | 0.709935 | 4.2:-21898206 | MS.gene39422:CDS |
| ACAAAGACGAAGATGACAGG+CGG | 0.721953 | 4.2:-21899006 | MS.gene39422:CDS |
| GGGCGTTATCTGGATCTGAG+GGG | 0.757957 | 4.2:-21898547 | MS.gene39422:CDS |
| TGATGATGAAGGGTCAACTG+GGG | 0.771361 | 4.2:-21898600 | MS.gene39422:CDS |
| GAAATGAAAGTTCTGCTGCG+AGG | 0.789150 | 4.2:-21898286 | MS.gene39422:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GCTTTAAATAATAATACAGT+TGG | - | chr4.2:21898976-21898995 | MS.gene39422:CDS | 20.0% |
| ! | ACAAGTATTTGAATGTTGTT+TGG | - | chr4.2:21898401-21898420 | MS.gene39422:CDS | 25.0% |
| ! | TATTTCCTTTATATCCTGAA+AGG | + | chr4.2:21898194-21898213 | None:intergenic | 25.0% |
| ! | TCTAAAGAAAAGATTAGATC+CGG | - | chr4.2:21897577-21897596 | MS.gene39422:CDS | 25.0% |
| ! | TGAAATGAACAGAAAAAACA+GGG | - | chr4.2:21898816-21898835 | MS.gene39422:CDS | 25.0% |
| ! | TTAGCATTACTTCATAAGTA+TGG | - | chr4.2:21899180-21899199 | MS.gene39422:CDS | 25.0% |
| ! | TTCATTTAATGCTTCATTCT+TGG | + | chr4.2:21897924-21897943 | None:intergenic | 25.0% |
| !! | AAGTATTTGAATGTTGTTTG+GGG | - | chr4.2:21898403-21898422 | MS.gene39422:CDS | 25.0% |
| !! | CAAGTATTTGAATGTTGTTT+GGG | - | chr4.2:21898402-21898421 | MS.gene39422:CDS | 25.0% |
| !!! | AGATTTGGAAAATTTGCTTT+TGG | - | chr4.2:21897388-21897407 | MS.gene39422:CDS | 25.0% |
| AAAGGACGATAAAAGTTTAC+TGG | - | chr4.2:21897787-21897806 | MS.gene39422:CDS | 30.0% | |
| AACAGTTGGATTTAAACTCT+CGG | - | chr4.2:21899257-21899276 | MS.gene39422:CDS | 30.0% | |
| AAGGACGATAAAAGTTTACT+GGG | - | chr4.2:21897788-21897807 | MS.gene39422:CDS | 30.0% | |
| CAAAGAATAGAATCAACAGT+TGG | - | chr4.2:21899243-21899262 | MS.gene39422:CDS | 30.0% | |
| CTGAAATGAACAGAAAAAAC+AGG | - | chr4.2:21898815-21898834 | MS.gene39422:CDS | 30.0% | |
| TAAAGGAAATAACTATTCGC+AGG | - | chr4.2:21898203-21898222 | MS.gene39422:CDS | 30.0% | |
| TGAAGTAATGCTAATGAAAC+TGG | + | chr4.2:21899174-21899193 | None:intergenic | 30.0% | |
| TTTAAACTCTCGGAAAATGA+TGG | - | chr4.2:21899267-21899286 | MS.gene39422:CDS | 30.0% | |
| ! | ATTAACCGGTTTAAAAGAAG+GGG | - | chr4.2:21898873-21898892 | MS.gene39422:CDS | 30.0% |
| ! | CATTAACCGGTTTAAAAGAA+GGG | - | chr4.2:21898872-21898891 | MS.gene39422:CDS | 30.0% |
| ! | GGATCTAATCTTTTCTTTAG+AGG | + | chr4.2:21897578-21897597 | None:intergenic | 30.0% |
| ! | TCAAAGAGAGATGATTTTGT+CGG | - | chr4.2:21897751-21897770 | MS.gene39422:CDS | 30.0% |
| !! | GAAACTTGCTAAATGGTTTA+TGG | - | chr4.2:21898228-21898247 | MS.gene39422:CDS | 30.0% |
| !! | GTTATGATCCATTTTCAAGA+AGG | - | chr4.2:21898902-21898921 | MS.gene39422:CDS | 30.0% |
| !! | TTTGGAAAATTTGCTTTTGG+AGG | - | chr4.2:21897391-21897410 | MS.gene39422:CDS | 30.0% |
| ACCAGTGATGAATCAAACAT+CGG | - | chr4.2:21897671-21897690 | MS.gene39422:CDS | 35.0% | |
| CTAAAACTGGACCTATCTAT+CGG | - | chr4.2:21898308-21898327 | MS.gene39422:CDS | 35.0% | |
| CTAGTTTATACTGTCGATCA+GGG | + | chr4.2:21898366-21898385 | None:intergenic | 35.0% | |
| GCATTACTTCATAAGTATGG+TGG | - | chr4.2:21899183-21899202 | MS.gene39422:CDS | 35.0% | |
| GCTATCCTTTCAGGATATAA+AGG | - | chr4.2:21898186-21898205 | MS.gene39422:CDS | 35.0% | |
| GGTGATTACAAAAGAAGAAG+AGG | - | chr4.2:21899318-21899337 | MS.gene39422:CDS | 35.0% | |
| TCAAGAATGCTTCTGAATTG+AGG | - | chr4.2:21898848-21898867 | MS.gene39422:CDS | 35.0% | |
| TGAAGAGGAATATAAGCAGT+GGG | - | chr4.2:21898483-21898502 | MS.gene39422:CDS | 35.0% | |
| TGCTTATATTCCTCTTCAAG+TGG | + | chr4.2:21898481-21898500 | None:intergenic | 35.0% | |
| TGCTTTGTAAGAGTTGGAAT+CGG | - | chr4.2:21898280-21898299 | MS.gene39422:CDS | 35.0% | |
| TTATATTCCTCTTCAAGTGG+AGG | + | chr4.2:21898478-21898497 | None:intergenic | 35.0% | |
| TTCTCAGCAGCAATATTTAG+CGG | + | chr4.2:21898658-21898677 | None:intergenic | 35.0% | |
| TTGAAGAGGAATATAAGCAG+TGG | - | chr4.2:21898482-21898501 | MS.gene39422:CDS | 35.0% | |
| ! | AGAGATGATTTTGTCGGATA+GGG | - | chr4.2:21897757-21897776 | MS.gene39422:CDS | 35.0% |
| ! | CCATTAACCGGTTTAAAAGA+AGG | - | chr4.2:21898871-21898890 | MS.gene39422:CDS | 35.0% |
| ! | CCTTCTTTTAAACCGGTTAA+TGG | + | chr4.2:21898874-21898893 | None:intergenic | 35.0% |
| ! | TCTAGTTTATACTGTCGATC+AGG | + | chr4.2:21898367-21898386 | None:intergenic | 35.0% |
| !! | ATGATCCATTTTCAAGAAGG+TGG | - | chr4.2:21898905-21898924 | MS.gene39422:CDS | 35.0% |
| AAAGGAAAGGCAATACTGAC+TGG | - | chr4.2:21897833-21897852 | MS.gene39422:CDS | 40.0% | |
| AACTACTATGTTGCAACACC+TGG | - | chr4.2:21898940-21898959 | MS.gene39422:CDS | 40.0% | |
| ACAAGGTAAGAACGATGATG+CGG | - | chr4.2:21898708-21898727 | MS.gene39422:CDS | 40.0% | |
| ACAATCAACTCCTCGAAGAA+AGG | + | chr4.2:21898256-21898275 | None:intergenic | 40.0% | |
| ACCCAAATCATCATCTCTGT+CGG | + | chr4.2:21897603-21897622 | None:intergenic | 40.0% | |
| ACCCACTTTCACTATCACTA+TGG | + | chr4.2:21898084-21898103 | None:intergenic | 40.0% | |
| AGGAAGAAGCAGATGATGAT+GGG | - | chr4.2:21897627-21897646 | MS.gene39422:CDS | 40.0% | |
| ATCAAAGCGTGAGAAAGGAA+AGG | - | chr4.2:21897820-21897839 | MS.gene39422:CDS | 40.0% | |
| ATTGCATCAAAGCGTGAGAA+AGG | - | chr4.2:21897815-21897834 | MS.gene39422:CDS | 40.0% | |
| CTTGTCCACCTTCTTGAAAA+TGG | + | chr4.2:21898913-21898932 | None:intergenic | 40.0% | |
| GCTAAATATTGCTGCTGAGA+AGG | - | chr4.2:21898657-21898676 | MS.gene39422:CDS | 40.0% | |
| TAAATGAACTGCGTGCAAAG+CGG | - | chr4.2:21897936-21897955 | MS.gene39422:CDS | 40.0% | |
| TCTACAAAGACGAAGATGAC+AGG | - | chr4.2:21897702-21897721 | MS.gene39422:CDS | 40.0% | |
| TCTGAATTGAGGCCATTAAC+CGG | - | chr4.2:21898859-21898878 | MS.gene39422:CDS | 40.0% | |
| TTCATTCTTGGCTGACCTAT+CGG | + | chr4.2:21897912-21897931 | None:intergenic | 40.0% | |
| ! | AGATGATGATTTGGGTAGTC+AGG | - | chr4.2:21897607-21897626 | MS.gene39422:CDS | 40.0% |
| ! | AGCCATAGTGATAGTGAAAG+TGG | - | chr4.2:21898079-21898098 | MS.gene39422:CDS | 40.0% |
| ! | GAGAGATGATTTTGTCGGAT+AGG | - | chr4.2:21897756-21897775 | MS.gene39422:CDS | 40.0% |
| ! | GCCATAGTGATAGTGAAAGT+GGG | - | chr4.2:21898080-21898099 | MS.gene39422:CDS | 40.0% |
| ! | GGAATCGGTAGATCTAAAAC+TGG | - | chr4.2:21898295-21898314 | MS.gene39422:CDS | 40.0% |
| ! | GTTGGTTGCTTTGTAAGAGT+TGG | - | chr4.2:21898274-21898293 | MS.gene39422:CDS | 40.0% |
| ! | TGATTCTAGGGACGATGATT+CGG | - | chr4.2:21897505-21897524 | MS.gene39422:CDS | 40.0% |
| ! | TGCATCCCCTTCTTTTAAAC+CGG | + | chr4.2:21898881-21898900 | None:intergenic | 40.0% |
| ! | TGCTGACAGTGATGATGATA+GGG | - | chr4.2:21898144-21898163 | MS.gene39422:CDS | 40.0% |
| ! | TTCTTCGAGGAGTTGATTGT+TGG | - | chr4.2:21898256-21898275 | MS.gene39422:CDS | 40.0% |
| ! | TTGCTGACAGTGATGATGAT+AGG | - | chr4.2:21898143-21898162 | MS.gene39422:CDS | 40.0% |
| !! | GGAATATAAGCAGTGGGTTA+AGG | - | chr4.2:21898489-21898508 | MS.gene39422:CDS | 40.0% |
| !!! | CATGTTTTGACTCTGTCAGT+TGG | - | chr4.2:21899297-21899316 | MS.gene39422:CDS | 40.0% |
| AAATCATCATCTCTGTCGGC+CGG | + | chr4.2:21897599-21897618 | None:intergenic | 45.0% | |
| AACTCTCGGAAAATGATGGC+AGG | - | chr4.2:21899271-21899290 | MS.gene39422:CDS | 45.0% | |
| AATATTTAGCGGCCTTGACG+AGG | + | chr4.2:21898647-21898666 | None:intergenic | 45.0% | |
| ACAAAGACGAAGATGACAGG+CGG | - | chr4.2:21897705-21897724 | MS.gene39422:CDS | 45.0% | |
| AGAAAAAGTCTGCCTCGTCA+AGG | - | chr4.2:21898632-21898651 | MS.gene39422:CDS | 45.0% | |
| AGAGGAACTTGTGATCCAGA+TGG | + | chr4.2:21897560-21897579 | None:intergenic | 45.0% | |
| ATGCGAGATGATGAAAGTGG+GGG | + | chr4.2:21897869-21897888 | None:intergenic | 45.0% | |
| CAAGAAGGTGGACAAGATCA+AGG | - | chr4.2:21898917-21898936 | MS.gene39422:CDS | 45.0% | |
| CAGGAAGAAGCAGATGATGA+TGG | - | chr4.2:21897626-21897645 | MS.gene39422:CDS | 45.0% | |
| CATGCGAGATGATGAAAGTG+GGG | + | chr4.2:21897870-21897889 | None:intergenic | 45.0% | |
| CTGCTGAGAAGGATCGATTA+AGG | - | chr4.2:21898668-21898687 | MS.gene39422:CDS | 45.0% | |
| GAAATGAAAGTTCTGCTGCG+AGG | - | chr4.2:21898425-21898444 | MS.gene39422:CDS | 45.0% | |
| GCATGCGAGATGATGAAAGT+GGG | + | chr4.2:21897871-21897890 | None:intergenic | 45.0% | |
| GCCGACAGAGATGATGATTT+GGG | - | chr4.2:21897599-21897618 | MS.gene39422:CDS | 45.0% | |
| GCCGATGTTTGATTCATCAC+TGG | + | chr4.2:21897675-21897694 | None:intergenic | 45.0% | |
| GGATCGATTAAGGAGCGATT+TGG | - | chr4.2:21898678-21898697 | MS.gene39422:CDS | 45.0% | |
| GGCAAGACTGCTAGAATTAG+AGG | - | chr4.2:21898747-21898766 | MS.gene39422:CDS | 45.0% | |
| GGTTTAAAAGAAGGGGATGC+AGG | - | chr4.2:21898880-21898899 | MS.gene39422:CDS | 45.0% | |
| GTCGGATAGGGCTTCAAAAA+AGG | - | chr4.2:21897769-21897788 | MS.gene39422:CDS | 45.0% | |
| GTTTATGGAGCCTTTCTTCG+AGG | - | chr4.2:21898243-21898262 | MS.gene39422:CDS | 45.0% | |
| TAAGAACGATGATGCGGAAG+TGG | - | chr4.2:21898714-21898733 | MS.gene39422:CDS | 45.0% | |
| TAGGAGCCTCTCTCAATCTA+CGG | + | chr4.2:21897988-21898007 | None:intergenic | 45.0% | |
| TATGCAAGCAGAAAGCCATC+TGG | - | chr4.2:21897542-21897561 | MS.gene39422:CDS | 45.0% | |
| TGTTGCAACACCTGGTGAAA+AGG | - | chr4.2:21898948-21898967 | MS.gene39422:CDS | 45.0% | |
| ! | AGCGATTTGGAAAGAGCACA+AGG | - | chr4.2:21898691-21898710 | MS.gene39422:CDS | 45.0% |
| ! | AGTGATGATGAAGGGTCAAC+TGG | - | chr4.2:21898109-21898128 | MS.gene39422:CDS | 45.0% |
| ! | GATGATGATAGGGCGTTATC+TGG | - | chr4.2:21898154-21898173 | MS.gene39422:CDS | 45.0% |
| ! | GGTCTCACAGTGATGATGAA+GGG | - | chr4.2:21898101-21898120 | MS.gene39422:CDS | 45.0% |
| ! | GTGATGATGAAGGGTCAACT+GGG | - | chr4.2:21898110-21898129 | MS.gene39422:CDS | 45.0% |
| ! | GTTGGCTTAGTTTCTGATGC+AGG | - | chr4.2:21898994-21899013 | MS.gene39422:CDS | 45.0% |
| ! | TGATGATGAAGGGTCAACTG+GGG | - | chr4.2:21898111-21898130 | MS.gene39422:CDS | 45.0% |
| !! | AATTTGCTTTTGGAGGCTGC+AGG | - | chr4.2:21897398-21897417 | MS.gene39422:CDS | 45.0% |
| !! | GCAGGTCGAAACTTGCTAAA+TGG | - | chr4.2:21898221-21898240 | MS.gene39422:CDS | 45.0% |
| !! | TAAGCAGTGGGTTAAGGAAG+TGG | - | chr4.2:21898495-21898514 | MS.gene39422:CDS | 45.0% |
| AAATCCTGCCTGAGCTCCTT+GGG | + | chr4.2:21899211-21899230 | None:intergenic | 50.0% | |
| ACCATGCAGAGCCGATAGAT+AGG | + | chr4.2:21898322-21898341 | None:intergenic | 50.0% | |
| ACGACGTGATGGCTCCTATT+CGG | - | chr4.2:21897472-21897491 | MS.gene39422:CDS | 50.0% | |
| AGGAGCTCAGGCAGGATTTA+TGG | - | chr4.2:21899212-21899231 | MS.gene39422:CDS | 50.0% | |
| ATACTGTCGATCAGGGTCTG+AGG | + | chr4.2:21898359-21898378 | None:intergenic | 50.0% | |
| ATCACTCCCACCATCCGAAT+AGG | + | chr4.2:21897489-21897508 | None:intergenic | 50.0% | |
| ATCTGAGGGGCTATCCTTTC+AGG | - | chr4.2:21898177-21898196 | MS.gene39422:CDS | 50.0% | |
| ATGAAAGTTCTGCTGCGAGG+TGG | - | chr4.2:21898428-21898447 | MS.gene39422:CDS | 50.0% | |
| ATGGCTCCTATTCGGATGGT+GGG | - | chr4.2:21897480-21897499 | MS.gene39422:CDS | 50.0% | |
| CGCATGCGAGATGATGAAAG+TGG | + | chr4.2:21897872-21897891 | None:intergenic | 50.0% | |
| CTTTGGTGGGGAAAAGTTCC+GGG | + | chr4.2:21898023-21898042 | None:intergenic | 50.0% | |
| GATGTGAAAGACCTGCGCTT+TGG | + | chr4.2:21898040-21898059 | None:intergenic | 50.0% | |
| GCTTTGGTGGGGAAAAGTTC+CGG | + | chr4.2:21898024-21898043 | None:intergenic | 50.0% | |
| GGCCGACAGAGATGATGATT+TGG | - | chr4.2:21897598-21897617 | MS.gene39422:CDS | 50.0% | |
| GTCCAGACATGCAAAGGTGA+AGG | - | chr4.2:21898771-21898790 | MS.gene39422:CDS | 50.0% | |
| GTCCTTCACCTTTGCATGTC+TGG | + | chr4.2:21898776-21898795 | None:intergenic | 50.0% | |
| GTTAAGGAAGTGGAACGCAG+TGG | - | chr4.2:21898505-21898524 | MS.gene39422:CDS | 50.0% | |
| TAAATCCTGCCTGAGCTCCT+TGG | + | chr4.2:21899212-21899231 | None:intergenic | 50.0% | |
| TCCAACACATCCTGCTTGCT+GGG | + | chr4.2:21898541-21898560 | None:intergenic | 50.0% | |
| TGAAAGACCTGCGCTTTGGT+GGG | + | chr4.2:21898036-21898055 | None:intergenic | 50.0% | |
| TGCGAGATGATGAAAGTGGG+GGG | + | chr4.2:21897868-21897887 | None:intergenic | 50.0% | |
| TGCTGATGCTGGAAAGTTGG+TGG | - | chr4.2:21899089-21899108 | MS.gene39422:CDS | 50.0% | |
| TGCTGCTGATGCTGGAAAGT+TGG | - | chr4.2:21899086-21899105 | MS.gene39422:CDS | 50.0% | |
| TTCAGCCAGCTTCAGAGCTT+TGG | + | chr4.2:21898800-21898819 | None:intergenic | 50.0% | |
| ! | AAAGCAGCAGCCTTTTCACC+AGG | + | chr4.2:21898961-21898980 | None:intergenic | 50.0% |
| ! | AGGGCGTTATCTGGATCTGA+GGG | - | chr4.2:21898163-21898182 | MS.gene39422:CDS | 50.0% |
| ! | CATAAGTATGGTGGAGCCCA+AGG | - | chr4.2:21899192-21899211 | MS.gene39422:CDS | 50.0% |
| ! | GGGTCTCACAGTGATGATGA+AGG | - | chr4.2:21898100-21898119 | MS.gene39422:CDS | 50.0% |
| ! | TAGGGCGTTATCTGGATCTG+AGG | - | chr4.2:21898162-21898181 | MS.gene39422:CDS | 50.0% |
| !! | ACCTATCTATCGGCTCTGCA+TGG | - | chr4.2:21898318-21898337 | MS.gene39422:CDS | 50.0% |
| !! | GGATGGTGGGAGTGATTCTA+GGG | - | chr4.2:21897493-21897512 | MS.gene39422:CDS | 50.0% |
| AAGGAAGTGGAACGCAGTGG+TGG | - | chr4.2:21898508-21898527 | MS.gene39422:CDS | 55.0% | |
| ACGATGATGCGGAAGTGGAG+AGG | - | chr4.2:21898719-21898738 | MS.gene39422:CDS | 55.0% | |
| AGAGAGGCTCCTAGAAGCTC+AGG | - | chr4.2:21897995-21898014 | MS.gene39422:CDS | 55.0% | |
| AGCAGCAGCTTCCAAGGCAA+TGG | + | chr4.2:21899073-21899092 | None:intergenic | 55.0% | |
| AGCATCAGCAGCAGCTTCCA+AGG | + | chr4.2:21899079-21899098 | None:intergenic | 55.0% | |
| AGCTCGCCGTAGATTGAGAG+AGG | - | chr4.2:21897979-21897998 | MS.gene39422:CDS | 55.0% | |
| CAGGAAGAACTGGTGCAGCT+GGG | - | chr4.2:21897417-21897436 | MS.gene39422:CDS | 55.0% | |
| CATCTGCCAGATCTGCCGAT+AGG | - | chr4.2:21897894-21897913 | MS.gene39422:CDS | 55.0% | |
| CGACTCTCCTCCACTTGAAG+AGG | - | chr4.2:21898468-21898487 | MS.gene39422:CDS | 55.0% | |
| CGTGATGGCTCCTATTCGGA+TGG | - | chr4.2:21897476-21897495 | MS.gene39422:CDS | 55.0% | |
| CTCAATCTACGGCGAGCTTC+TGG | + | chr4.2:21897977-21897996 | None:intergenic | 55.0% | |
| CTGGTGCAGCTGGGAGAAAT+CGG | - | chr4.2:21897426-21897445 | MS.gene39422:CDS | 55.0% | |
| GAAAGACCTGCGCTTTGGTG+GGG | + | chr4.2:21898035-21898054 | None:intergenic | 55.0% | |
| GAGAGGCTCCTAGAAGCTCA+GGG | - | chr4.2:21897996-21898015 | MS.gene39422:CDS | 55.0% | |
| GATGAAGGGTCAACTGGGGA+TGG | - | chr4.2:21898115-21898134 | MS.gene39422:CDS | 55.0% | |
| GATGGCTCCTATTCGGATGG+TGG | - | chr4.2:21897479-21897498 | MS.gene39422:CDS | 55.0% | |
| GATTCCGTCCCTTGATCCAC+CGG | + | chr4.2:21899126-21899145 | None:intergenic | 55.0% | |
| GCGAGATGATGAAAGTGGGG+GGG | + | chr4.2:21897867-21897886 | None:intergenic | 55.0% | |
| GGGCGTTATCTGGATCTGAG+GGG | - | chr4.2:21898164-21898183 | MS.gene39422:CDS | 55.0% | |
| GTCCAACACATCCTGCTTGC+TGG | + | chr4.2:21898542-21898561 | None:intergenic | 55.0% | |
| GTGAAAGACCTGCGCTTTGG+TGG | + | chr4.2:21898037-21898056 | None:intergenic | 55.0% | |
| GTTTCTGATGCAGGCGCCAA+CGG | - | chr4.2:21899003-21899022 | MS.gene39422:CDS | 55.0% | |
| TACCGGTACTCCAGTTCCGT+TGG | + | chr4.2:21899022-21899041 | None:intergenic | 55.0% | |
| TGCGGAAGTGGAGAGGATCA+AGG | - | chr4.2:21898726-21898745 | MS.gene39422:CDS | 55.0% | |
| TTCTGCTGCGAGGTGGCAAA+TGG | - | chr4.2:21898435-21898454 | MS.gene39422:CDS | 55.0% | |
| TTGGAAGCTGCTGCTGATGC+TGG | - | chr4.2:21899078-21899097 | MS.gene39422:CDS | 55.0% | |
| TTGGAGGCTGCAGGAAGAAC+TGG | - | chr4.2:21897407-21897426 | MS.gene39422:CDS | 55.0% | |
| ! | ACTTTTCCCCACCAAAGCGC+AGG | - | chr4.2:21898026-21898045 | MS.gene39422:CDS | 55.0% |
| ! | GTACCGGTAACTGCAGAGTC+TGG | - | chr4.2:21899033-21899052 | MS.gene39422:CDS | 55.0% |
| ! | GTTGGTGGATACGAGTGCTC+CGG | - | chr4.2:21899104-21899123 | MS.gene39422:CDS | 55.0% |
| !! | AGAGGCGTCCAGACATGCAA+AGG | - | chr4.2:21898765-21898784 | MS.gene39422:CDS | 55.0% |
| !! | CGGATGGTGGGAGTGATTCT+AGG | - | chr4.2:21897492-21897511 | MS.gene39422:CDS | 55.0% |
| AAGTGGAACGCAGTGGTGGC+CGG | - | chr4.2:21898512-21898531 | MS.gene39422:CDS | 60.0% | |
| ACGAGTGCTCCGGTGGATCA+AGG | - | chr4.2:21899114-21899133 | MS.gene39422:CDS | 60.0% | |
| CACGTCGTCTCCTCGAAGGT+GGG | + | chr4.2:21897460-21897479 | None:intergenic | 60.0% | |
| CCATCACGTCGTCTCCTCGA+AGG | + | chr4.2:21897464-21897483 | None:intergenic | 60.0% | |
| CCTTCGAGGAGACGACGTGA+TGG | - | chr4.2:21897461-21897480 | MS.gene39422:CDS | 60.0% | |
| CGAGTGCTCCGGTGGATCAA+GGG | - | chr4.2:21899115-21899134 | MS.gene39422:CDS | 60.0% | |
| CGCCAACGGAACTGGAGTAC+CGG | - | chr4.2:21899017-21899036 | MS.gene39422:CDS | 60.0% | |
| CTCCTAGAAGCTCAGGGTCC+CGG | - | chr4.2:21898002-21898021 | MS.gene39422:CDS | 60.0% | |
| GAAGGGTCAACTGGGGATGG+AGG | - | chr4.2:21898118-21898137 | MS.gene39422:CDS | 60.0% | |
| GATGGGCGAAGCGATCGTGA+AGG | - | chr4.2:21897644-21897663 | MS.gene39422:CDS | 60.0% | |
| GCAGGAAGAACTGGTGCAGC+TGG | - | chr4.2:21897416-21897435 | MS.gene39422:CDS | 60.0% | |
| GCCCAGCAAGCAGGATGTGT+TGG | - | chr4.2:21898537-21898556 | MS.gene39422:CDS | 60.0% | |
| GCGCCAGACTCTGCAGTTAC+CGG | + | chr4.2:21899039-21899058 | None:intergenic | 60.0% | |
| GGCTGACCTATCGGCAGATC+TGG | + | chr4.2:21897903-21897922 | None:intergenic | 60.0% | |
| GGTAACTGCAGAGTCTGGCG+CGG | - | chr4.2:21899038-21899057 | MS.gene39422:CDS | 60.0% | |
| GGTGGCTACTGCCATTGCCT+TGG | - | chr4.2:21899059-21899078 | MS.gene39422:CDS | 60.0% | |
| TCACGTCGTCTCCTCGAAGG+TGG | + | chr4.2:21897461-21897480 | None:intergenic | 60.0% | |
| TGCTCCGGTGGATCAAGGGA+CGG | - | chr4.2:21899119-21899138 | MS.gene39422:CDS | 60.0% | |
| TTCCGGGACCCTGAGCTTCT+AGG | + | chr4.2:21898007-21898026 | None:intergenic | 60.0% | |
| ! | CATCCTGCTTGCTGGGCATC+CGG | + | chr4.2:21898534-21898553 | None:intergenic | 60.0% |
| !! | GGACGCCAAAGCTCTGAAGC+TGG | - | chr4.2:21898792-21898811 | MS.gene39422:CDS | 60.0% |
| AACTGCAGAGTCTGGCGCGG+TGG | - | chr4.2:21899041-21899060 | MS.gene39422:CDS | 65.0% | |
| GATGCAGGCGCCAACGGAAC+TGG | - | chr4.2:21899009-21899028 | MS.gene39422:CDS | 65.0% | |
| GGCACTCTCTCCCACCTTCG+AGG | - | chr4.2:21897447-21897466 | MS.gene39422:CDS | 65.0% | |
| GGTGGATACGAGTGCTCCGG+TGG | - | chr4.2:21899107-21899126 | MS.gene39422:CDS | 65.0% | |
| TGGTGGAGCCCAAGGAGCTC+AGG | - | chr4.2:21899200-21899219 | MS.gene39422:CDS | 65.0% | |
| GGAGCCCAAGGAGCTCAGGC+AGG | - | chr4.2:21899204-21899223 | MS.gene39422:CDS | 70.0% | |
| TGGCCGGATGCCCAGCAAGC+AGG | - | chr4.2:21898528-21898547 | MS.gene39422:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 21897383 | 21899350 | 21897383 | ID=MS.gene39422 |
| chr4.2 | mRNA | 21897383 | 21899350 | 21897383 | ID=MS.gene39422.t1;Parent=MS.gene39422 |
| chr4.2 | exon | 21897383 | 21899350 | 21897383 | ID=MS.gene39422.t1.exon1;Parent=MS.gene39422.t1 |
| chr4.2 | CDS | 21897383 | 21899350 | 21897383 | ID=cds.MS.gene39422.t1;Parent=MS.gene39422.t1 |
| Gene Sequence |
| Protein sequence |
