Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39652.t1 | AAL99371.1 | 91 | 512 | 20 | 5 | 1 | 493 | 1 | 505 | 1.20E-257 | 898.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39652.t1 | Q9LJK1 | 65.3 | 473 | 150 | 3 | 27 | 493 | 37 | 501 | 1.6e-176 | 620.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39652.t1 | Q5DTC8 | 91.0 | 512 | 20 | 5 | 1 | 493 | 1 | 505 | 8.9e-258 | 898.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056059 | MS.gene39652 | 0.809163 | 2.17E-50 | -1.69E-46 |
| MS.gene05884 | MS.gene39652 | 0.822118 | 2.81E-53 | -1.69E-46 |
| MS.gene060602 | MS.gene39652 | 0.813525 | 2.45E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39652.t1 | MTR_4g086010 | 91.287 | 505 | 31 | 2 | 1 | 493 | 1 | 504 | 0.0 | 922 |
| MS.gene39652.t1 | MTR_1g096880 | 30.000 | 150 | 100 | 3 | 220 | 365 | 257 | 405 | 4.63e-15 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39652.t1 | AT3G19280 | 62.919 | 507 | 168 | 5 | 1 | 493 | 1 | 501 | 0.0 | 642 |
| MS.gene39652.t1 | AT1G49710 | 64.182 | 483 | 151 | 3 | 27 | 493 | 37 | 513 | 0.0 | 639 |
| MS.gene39652.t1 | AT1G71990 | 33.333 | 108 | 71 | 1 | 252 | 359 | 282 | 388 | 1.05e-12 | 70.1 |
Find 110 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAGAATTTGAGGTCTTTC+AGG | 0.176747 | 4.2:+24777096 | None:intergenic |
| GGAGCAAAATCTTGAATATT+TGG | 0.188827 | 4.2:+24778523 | None:intergenic |
| TGTTCAGTGGGATGTAAATT+TGG | 0.189104 | 4.2:-24781323 | MS.gene39652:CDS |
| GGATGTAAATTTGGGTTTAA+TGG | 0.196217 | 4.2:-24781314 | MS.gene39652:CDS |
| GATGTAAATTTGGGTTTAAT+GGG | 0.244101 | 4.2:-24781313 | MS.gene39652:CDS |
| CAAGGTCGCTTCTTGAAGTC+TGG | 0.249475 | 4.2:+24778020 | None:intergenic |
| TTTCAAAGCCCTTGTGGATA+TGG | 0.260182 | 4.2:-24778114 | MS.gene39652:CDS |
| CTGAAACTGGTAAACCTTCT+TGG | 0.261326 | 4.2:+24782217 | None:intergenic |
| CAAATGCAGCCTCAGGTTTC+CGG | 0.264039 | 4.2:+24781288 | None:intergenic |
| ATTCACAAGCTAGATGATTA+TGG | 0.286226 | 4.2:-24781673 | MS.gene39652:intron |
| ATAAGTATACCTCAAGTAAA+TGG | 0.291681 | 4.2:+24777926 | None:intergenic |
| GTGGTTGAAGGTGATGATTT+TGG | 0.305457 | 4.2:-24782045 | MS.gene39652:CDS |
| TTCCTTCTCTCTACTCTTTG+TGG | 0.307095 | 4.2:+24778052 | None:intergenic |
| AGCTAAATTTGTAGCGCGTC+AGG | 0.312319 | 4.2:+24779415 | None:intergenic |
| GAAAGACCTCAAATTCTAAA+AGG | 0.322355 | 4.2:-24777093 | MS.gene39652:CDS |
| TCCATACAGGAACATGATTC+AGG | 0.327965 | 4.2:+24777121 | None:intergenic |
| AATGAATGATTATATGCTTC+AGG | 0.344669 | 4.2:+24778418 | None:intergenic |
| CGGAAACCTGAGGCTGCATT+TGG | 0.349184 | 4.2:-24781287 | MS.gene39652:CDS |
| GTTCAGTGGGATGTAAATTT+GGG | 0.358728 | 4.2:-24781322 | MS.gene39652:CDS |
| ACCACAAGTGCTACAAATAA+AGG | 0.376044 | 4.2:+24782153 | None:intergenic |
| TGAAACTGGTAAACCTTCTT+GGG | 0.382153 | 4.2:+24782218 | None:intergenic |
| AAATTCGACCATTTCTTCTT+CGG | 0.400382 | 4.2:+24782180 | None:intergenic |
| AACATCTCGATCGACTCTTA+TGG | 0.406384 | 4.2:-24780441 | MS.gene39652:CDS |
| GAAATTTCGAGCACCACAAT+TGG | 0.407353 | 4.2:+24780497 | None:intergenic |
| AATCAACATCCCCGTTGAAC+TGG | 0.408380 | 4.2:+24777001 | None:intergenic |
| GGTCTTTCAGGCTTCCATAC+AGG | 0.423025 | 4.2:+24777108 | None:intergenic |
| CGTAAGAACAGCAGTCTTGA+AGG | 0.425255 | 4.2:+24777155 | None:intergenic |
| TTTATACCTTCCAGTTCAAC+GGG | 0.427236 | 4.2:-24777011 | MS.gene39652:CDS |
| ACTCTTATGGTAGTTGTCAT+AGG | 0.429860 | 4.2:-24780428 | MS.gene39652:CDS |
| ATGAATGATTATATGCTTCA+GGG | 0.430093 | 4.2:+24778419 | None:intergenic |
| TGCCTCTGTGTCAAGCCCGC+AGG | 0.433454 | 4.2:+24777039 | None:intergenic |
| ACCGTTGTTGAAACTGAAAC+TGG | 0.434800 | 4.2:+24782204 | None:intergenic |
| CAACGGTTCCGAAGAAGAAA+TGG | 0.436167 | 4.2:-24782188 | MS.gene39652:CDS |
| CGGTCACGTGCGGTGGTTGA+AGG | 0.440213 | 4.2:-24782057 | MS.gene39652:CDS |
| CCCTGAATCATGTTCCTGTA+TGG | 0.440726 | 4.2:-24777122 | MS.gene39652:CDS |
| ATCATATCTATGTGAGAGAA+AGG | 0.446491 | 4.2:-24777968 | MS.gene39652:CDS |
| GGAACTATCCCTGTGGTTGT+TGG | 0.468275 | 4.2:-24778550 | MS.gene39652:CDS |
| GCCTTTATTTGTAGCACTTG+TGG | 0.470674 | 4.2:-24782154 | MS.gene39652:CDS |
| TTGCCGCCTTTGCATTCACT+TGG | 0.471450 | 4.2:-24778075 | MS.gene39652:CDS |
| AAAAGGTGGCGATAAATTGA+AGG | 0.471707 | 4.2:-24777076 | MS.gene39652:CDS |
| TCATATCTATGTGAGAGAAA+GGG | 0.471718 | 4.2:-24777967 | MS.gene39652:CDS |
| TGCTAGGTATCTCATGGACT+TGG | 0.478874 | 4.2:+24778447 | None:intergenic |
| CTTAATAGGTGGAAGTATGA+AGG | 0.479545 | 4.2:-24778149 | MS.gene39652:intron |
| AATTTGGGTTTAATGGGGAC+CGG | 0.493352 | 4.2:-24781307 | MS.gene39652:CDS |
| AAGGTCGCTTCTTGAAGTCT+GGG | 0.499184 | 4.2:+24778021 | None:intergenic |
| TGTTGATTTCAGAAGTCACT+TGG | 0.501731 | 4.2:-24776986 | MS.gene39652:CDS |
| CTTTATACCTTCCAGTTCAA+CGG | 0.510464 | 4.2:-24777012 | MS.gene39652:CDS |
| GGGTTAGAGACAGTTGGTGG+TGG | 0.519319 | 4.2:-24782024 | MS.gene39652:intron |
| TTTGGCTTACCTCAGCAAGC+TGG | 0.521291 | 4.2:-24781269 | MS.gene39652:CDS |
| GCCTCTGTGTCAAGCCCGCA+GGG | 0.522965 | 4.2:+24777040 | None:intergenic |
| CCATACCAGCAACAAGCGAC+TGG | 0.524286 | 4.2:+24779343 | None:intergenic |
| TTTATATATCAAAGAACTAG+AGG | 0.526597 | 4.2:-24778485 | MS.gene39652:CDS |
| GGGCTTCGAGAGCTTGCAAT+CGG | 0.529518 | 4.2:+24780475 | None:intergenic |
| CAGATCTAGCAATTTAACTC+TGG | 0.532467 | 4.2:-24777181 | MS.gene39652:CDS |
| CGACCTTGCAAGTGCACTCG+AGG | 0.534412 | 4.2:-24778005 | MS.gene39652:CDS |
| CTATCATCTGACGTCCCTGT+TGG | 0.535464 | 4.2:-24780600 | MS.gene39652:CDS |
| AGAAAGGGGAACATTTGAGA+TGG | 0.538112 | 4.2:-24777952 | MS.gene39652:CDS |
| GACCCTCGAGTGCACTTGCA+AGG | 0.544331 | 4.2:+24778002 | None:intergenic |
| AGATGGAGTCCATTTACTTG+AGG | 0.544735 | 4.2:-24777935 | MS.gene39652:intron |
| GCAAAATCTTGAATATTTGG+AGG | 0.547789 | 4.2:+24778526 | None:intergenic |
| TTTGGGTTAGAGACAGTTGG+TGG | 0.548513 | 4.2:-24782027 | MS.gene39652:CDS |
| GCTAAATTTGTAGCGCGTCA+GGG | 0.548640 | 4.2:+24779416 | None:intergenic |
| CATAGGAATCGTGATGGAAG+AGG | 0.549344 | 4.2:-24780411 | MS.gene39652:intron |
| GGTAAGCCAAATGCAGCCTC+AGG | 0.550885 | 4.2:+24781281 | None:intergenic |
| TGCAAGTGTTCTGAGATCAA+TGG | 0.553518 | 4.2:-24781243 | MS.gene39652:CDS |
| CCATACAGGAACATGATTCA+GGG | 0.555223 | 4.2:+24777122 | None:intergenic |
| CTTCAACCACCGCACGTGAC+CGG | 0.560057 | 4.2:+24782058 | None:intergenic |
| GCTTACCCACCGTCGTGCCA+TGG | 0.563480 | 4.2:+24781187 | None:intergenic |
| TGATTCTTTCAAAGCCCTTG+TGG | 0.563594 | 4.2:-24778120 | MS.gene39652:CDS |
| TTAATAGGTGGAAGTATGAA+GGG | 0.568822 | 4.2:-24778148 | MS.gene39652:intron |
| ATGTAAATTTGGGTTTAATG+GGG | 0.569442 | 4.2:-24781312 | MS.gene39652:CDS |
| CATATCTATGTGAGAGAAAG+GGG | 0.571252 | 4.2:-24777966 | MS.gene39652:CDS |
| TGGTTGCTGACTTGTTCTAC+CGG | 0.572262 | 4.2:-24782077 | MS.gene39652:CDS |
| TTTGGAGGACCAACAACCAC+AGG | 0.573436 | 4.2:+24778541 | None:intergenic |
| TGTAGCACTTGTGGTTATTG+CGG | 0.574927 | 4.2:-24782145 | MS.gene39652:CDS |
| ATGGGCTGAGTATGACATCA+TGG | 0.579350 | 4.2:-24780568 | MS.gene39652:CDS |
| GAATGGAAGTCATGTTCAGT+GGG | 0.580562 | 4.2:-24781335 | MS.gene39652:CDS |
| ACAACAACAACAACCCAAGA+AGG | 0.582368 | 4.2:-24782231 | MS.gene39652:CDS |
| TATGGCTAAGAACGCAGCTA+TGG | 0.583698 | 4.2:-24782097 | MS.gene39652:CDS |
| AGATTAAGAACAGCTTAACC+TGG | 0.594085 | 4.2:+24781626 | None:intergenic |
| GTTTACAAAATATACCCTGC+GGG | 0.597021 | 4.2:-24777054 | MS.gene39652:CDS |
| GTTCTACCGGTCACGTGCGG+TGG | 0.597759 | 4.2:-24782064 | MS.gene39652:CDS |
| AGGGACGTCAGATGATAGAC+TGG | 0.597764 | 4.2:+24780605 | None:intergenic |
| ATTACTTCAAACTTGGCACA+AGG | 0.599899 | 4.2:+24776955 | None:intergenic |
| CTTGCAGTTCCAGCTTGCTG+AGG | 0.609503 | 4.2:+24781260 | None:intergenic |
| AACATCCCCGTTGAACTGGA+AGG | 0.611381 | 4.2:+24777005 | None:intergenic |
| ATTTGAAAATTCTAACGAGG+AGG | 0.613665 | 4.2:-24779388 | MS.gene39652:CDS |
| GGCCACAAAGAGTAGAGAGA+AGG | 0.614704 | 4.2:-24778054 | MS.gene39652:CDS |
| GGAATGGAAGTCATGTTCAG+TGG | 0.622651 | 4.2:-24781336 | MS.gene39652:CDS |
| AGTTGTCATAGGAATCGTGA+TGG | 0.623002 | 4.2:-24780417 | MS.gene39652:CDS |
| AGACCTCAAATTCTAAAAGG+TGG | 0.623532 | 4.2:-24777090 | MS.gene39652:CDS |
| ACCAGTTTCAGTTTCAACAA+CGG | 0.629696 | 4.2:-24782205 | MS.gene39652:CDS |
| AAGCATATTCAAAATCAACC+AGG | 0.632488 | 4.2:-24781644 | MS.gene39652:CDS |
| TGCAGAGAACAATCTTGCCA+TGG | 0.638573 | 4.2:-24781204 | MS.gene39652:CDS |
| GTACAGCTGCCATATCCACA+AGG | 0.639994 | 4.2:+24778105 | None:intergenic |
| AAGCATATAATCATTCATTG+AGG | 0.644737 | 4.2:-24778414 | MS.gene39652:intron |
| TTGTGGCCAAGTGAATGCAA+AGG | 0.647931 | 4.2:+24778069 | None:intergenic |
| TGGCCAAGTGAATGCAAAGG+CGG | 0.648142 | 4.2:+24778072 | None:intergenic |
| GACCTTGCAAGTGCACTCGA+GGG | 0.651570 | 4.2:-24778004 | MS.gene39652:CDS |
| AGGGCTTTGAAAGAATCAGA+TGG | 0.653261 | 4.2:+24778125 | None:intergenic |
| TAATGGGGACCGGAAACCTG+AGG | 0.665866 | 4.2:-24781297 | MS.gene39652:CDS |
| CTTGTTCTACCGGTCACGTG+CGG | 0.672406 | 4.2:-24782067 | MS.gene39652:CDS |
| AGCATTTGAAAATTCTAACG+AGG | 0.673819 | 4.2:-24779391 | MS.gene39652:CDS |
| ACCCTGCGGGCTTGACACAG+AGG | 0.679828 | 4.2:-24777041 | MS.gene39652:CDS |
| TTGGAGGACCAACAACCACA+GGG | 0.701308 | 4.2:+24778542 | None:intergenic |
| TACAGCTGCCATATCCACAA+GGG | 0.711712 | 4.2:+24778106 | None:intergenic |
| ACAATCTTGCCATGGCACGA+CGG | 0.711769 | 4.2:-24781196 | MS.gene39652:intron |
| TGTTGTAGGAACTATCCCTG+TGG | 0.713149 | 4.2:-24778557 | MS.gene39652:intron |
| GGTTTACAAAATATACCCTG+CGG | 0.717875 | 4.2:-24777055 | MS.gene39652:CDS |
| TTATACCTTCCAGTTCAACG+GGG | 0.752006 | 4.2:-24777010 | MS.gene39652:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAACAAATTAAAAGTTATTT+TGG | - | chr4.2:24779987-24780006 | MS.gene39652:intron | 10.0% |
| !!! | AATAACTTTTAATTTGTTTT+TGG | + | chr4.2:24779986-24780005 | None:intergenic | 10.0% |
| !!! | TTTCTAAAAAAAATTGAAAT+AGG | + | chr4.2:24778503-24778522 | None:intergenic | 10.0% |
| !! | TTGATATATAAAAATGAATC+AGG | + | chr4.2:24780707-24780726 | None:intergenic | 15.0% |
| !!! | AAATCAAAATATCCATATTT+TGG | + | chr4.2:24777721-24777740 | None:intergenic | 15.0% |
| !!! | AACTTTATTTAAAAGAATGA+AGG | - | chr4.2:24779374-24779393 | MS.gene39652:CDS | 15.0% |
| !!! | TATGATACTATTTATTTCTT+AGG | + | chr4.2:24781453-24781472 | None:intergenic | 15.0% |
| !!! | TATTTGATCGTAATTTATTT+TGG | + | chr4.2:24781364-24781383 | None:intergenic | 15.0% |
| !! | AAACAAAAATTATGGTACAT+TGG | - | chr4.2:24780330-24780349 | MS.gene39652:intron | 20.0% |
| !! | AACAAAAATTATGGTACATT+GGG | - | chr4.2:24780331-24780350 | MS.gene39652:intron | 20.0% |
| !! | AATTGTCATACATAAACAAT+GGG | + | chr4.2:24779668-24779687 | None:intergenic | 20.0% |
| !! | ACTTATTTGAATTTATCTAC+TGG | + | chr4.2:24781885-24781904 | None:intergenic | 20.0% |
| !! | ATATTCAAGGAACTTTAATA+AGG | - | chr4.2:24777262-24777281 | MS.gene39652:intron | 20.0% |
| !! | GTGAATAAATTTCATCAAAA+AGG | + | chr4.2:24777513-24777532 | None:intergenic | 20.0% |
| !! | TAATTGTCATACATAAACAA+TGG | + | chr4.2:24779669-24779688 | None:intergenic | 20.0% |
| !! | TTGATGAAAACTAAAAACAA+AGG | + | chr4.2:24778442-24778461 | None:intergenic | 20.0% |
| !! | TTTATATATCAAAGAACTAG+AGG | - | chr4.2:24780715-24780734 | MS.gene39652:intron | 20.0% |
| !!! | AATGTACCATAATTTTTGTT+TGG | + | chr4.2:24780331-24780350 | None:intergenic | 20.0% |
| !!! | AGAAGTTATTTTCAAAAACT+AGG | + | chr4.2:24778974-24778993 | None:intergenic | 20.0% |
| !!! | ATAATGCTTTTTGAAAGAAT+TGG | - | chr4.2:24779444-24779463 | MS.gene39652:intron | 20.0% |
| !!! | ATTTGGTTTTAAAATGTGAA+TGG | - | chr4.2:24780973-24780992 | MS.gene39652:intron | 20.0% |
| !!! | TATCTGAAAAATGTTGTTTT+TGG | - | chr4.2:24777692-24777711 | MS.gene39652:intron | 20.0% |
| !!! | TCAGATGAAGAATTTTAAAA+GGG | - | chr4.2:24779179-24779198 | MS.gene39652:intron | 20.0% |
| !!! | TTTTTGTATTTTGTGATTTG+TGG | - | chr4.2:24781009-24781028 | MS.gene39652:intron | 20.0% |
| ! | AAAACATCATAATCAGACAT+TGG | + | chr4.2:24778847-24778866 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | - | chr4.2:24778132-24778151 | MS.gene39652:CDS | 25.0% |
| ! | AAGCATATAATCATTCATTG+AGG | - | chr4.2:24780786-24780805 | MS.gene39652:intron | 25.0% |
| ! | AAGTGAATTTCCATGTATAA+TGG | - | chr4.2:24780516-24780535 | MS.gene39652:CDS | 25.0% |
| ! | AATAACCAGAAAAGAACTTA+TGG | - | chr4.2:24781804-24781823 | MS.gene39652:intron | 25.0% |
| ! | AATGAATGATTATATGCTTC+AGG | + | chr4.2:24780785-24780804 | None:intergenic | 25.0% |
| ! | ACAAAAATTCATTGGAAGTT+TGG | + | chr4.2:24779696-24779715 | None:intergenic | 25.0% |
| ! | ATAAGTATACCTCAAGTAAA+TGG | + | chr4.2:24781277-24781296 | None:intergenic | 25.0% |
| ! | ATGAATGATTATATGCTTCA+GGG | + | chr4.2:24780784-24780803 | None:intergenic | 25.0% |
| ! | ATGGAATAAGCTAAAATGAT+AGG | + | chr4.2:24781940-24781959 | None:intergenic | 25.0% |
| ! | ATGTGTTGAATTTGAATAAC+TGG | + | chr4.2:24779917-24779936 | None:intergenic | 25.0% |
| ! | ATTTAAAAGAATGAAGGAGT+TGG | - | chr4.2:24779380-24779399 | MS.gene39652:CDS | 25.0% |
| ! | CACAAAAATTACTTCAAACT+TGG | + | chr4.2:24782255-24782274 | None:intergenic | 25.0% |
| ! | CATCAAGATTTATAAATGAG+AGG | - | chr4.2:24779102-24779121 | MS.gene39652:intron | 25.0% |
| ! | CATGACATTCTTAATAAAGA+TGG | + | chr4.2:24781959-24781978 | None:intergenic | 25.0% |
| ! | CATGTGAATTATTTGTATCA+AGG | - | chr4.2:24777467-24777486 | MS.gene39652:intron | 25.0% |
| ! | CTTCAACTCTAAATAAACTT+TGG | + | chr4.2:24780078-24780097 | None:intergenic | 25.0% |
| ! | CTTGATACAAATAATTCACA+TGG | + | chr4.2:24777469-24777488 | None:intergenic | 25.0% |
| ! | GAAAGGAAGAAACAAAAAAT+GGG | + | chr4.2:24779280-24779299 | None:intergenic | 25.0% |
| ! | GAATATCATATGATTGTGTT+TGG | - | chr4.2:24781543-24781562 | MS.gene39652:intron | 25.0% |
| ! | GATGAACCAAACAAAAATTA+TGG | - | chr4.2:24780322-24780341 | MS.gene39652:intron | 25.0% |
| ! | GTTCTATCAAAAACCATATT+TGG | + | chr4.2:24778172-24778191 | None:intergenic | 25.0% |
| ! | TAAAATGATAGGTACCATAA+TGG | + | chr4.2:24781929-24781948 | None:intergenic | 25.0% |
| ! | TAAACTTTAACTCAGTGATT+TGG | - | chr4.2:24779210-24779229 | MS.gene39652:intron | 25.0% |
| ! | TACGAACAACAAAAATTCAT+TGG | + | chr4.2:24779704-24779723 | None:intergenic | 25.0% |
| ! | TAGAGAAAAAATTGTCTTTC+AGG | + | chr4.2:24780427-24780446 | None:intergenic | 25.0% |
| ! | TAGTATCATATGATTGTGTT+TGG | - | chr4.2:24781463-24781482 | MS.gene39652:intron | 25.0% |
| ! | TATAAAAATGAATCAGGAGA+AGG | + | chr4.2:24780701-24780720 | None:intergenic | 25.0% |
| ! | TGAAAACAAACAAGTTTCTT+CGG | - | chr4.2:24780822-24780841 | MS.gene39652:intron | 25.0% |
| ! | TTATCCTTGAAGATCTATAT+TGG | - | chr4.2:24779497-24779516 | MS.gene39652:intron | 25.0% |
| ! | TTATTCAAATTCAACACATG+TGG | - | chr4.2:24779918-24779937 | MS.gene39652:intron | 25.0% |
| !! | AAATTTTCCACCATTATACA+TGG | + | chr4.2:24780529-24780548 | None:intergenic | 25.0% |
| !! | ATGTAAATTTGGGTTTAATG+GGG | - | chr4.2:24777888-24777907 | MS.gene39652:intron | 25.0% |
| !! | CAATTTTATTGCAAATGAAG+TGG | - | chr4.2:24780385-24780404 | MS.gene39652:intron | 25.0% |
| !! | CATAAAATTTTCACAACTGA+TGG | + | chr4.2:24780038-24780057 | None:intergenic | 25.0% |
| !! | GATGTAAATTTGGGTTTAAT+GGG | - | chr4.2:24777887-24777906 | MS.gene39652:intron | 25.0% |
| !! | GTCAGATGAAGAATTTTAAA+AGG | - | chr4.2:24779178-24779197 | MS.gene39652:intron | 25.0% |
| !! | GTTGATTCATTACATTTGAT+TGG | - | chr4.2:24778049-24778068 | MS.gene39652:CDS | 25.0% |
| !! | TTTAAAATTCTTCATCTGAC+AGG | + | chr4.2:24779178-24779197 | None:intergenic | 25.0% |
| !! | TTTTCTAATGGTTTCTCTAA+TGG | + | chr4.2:24778125-24778144 | None:intergenic | 25.0% |
| !!! | AATATTCTAGGATCCAATTA+TGG | + | chr4.2:24780924-24780943 | None:intergenic | 25.0% |
| !!! | AATGGTGGAAAATTTTATAG+CGG | - | chr4.2:24780534-24780553 | MS.gene39652:CDS | 25.0% |
| !!! | ACACATTATTTTGACACAAA+TGG | - | chr4.2:24781995-24782014 | MS.gene39652:intron | 25.0% |
| !!! | ATCAGAAAGCATTTTATACA+TGG | + | chr4.2:24779001-24779020 | None:intergenic | 25.0% |
| !!! | CACATTATTTTGACACAAAT+GGG | - | chr4.2:24781996-24782015 | MS.gene39652:intron | 25.0% |
| !!! | GTTGTTGTAGTATTTTTGTA+TGG | - | chr4.2:24778252-24778271 | MS.gene39652:intron | 25.0% |
| !!! | TGTTTTAATATAAGCTATCC+TGG | - | chr4.2:24781769-24781788 | MS.gene39652:intron | 25.0% |
| !!! | TTAGTCGTTTTTATAATTGC+AGG | - | chr4.2:24780156-24780175 | MS.gene39652:intron | 25.0% |
| !!! | TTCGTTTTTCTTGTTTTCTA+AGG | - | chr4.2:24778468-24778487 | MS.gene39652:CDS | 25.0% |
| !!! | TTTTCAGTTTTTGGCTTTAT+CGG | + | chr4.2:24778660-24778679 | None:intergenic | 25.0% |
| AAATTCGACCATTTCTTCTT+CGG | + | chr4.2:24777023-24777042 | None:intergenic | 30.0% | |
| AACACCAATATAGATCTTCA+AGG | + | chr4.2:24779504-24779523 | None:intergenic | 30.0% | |
| AACATTTGATCCATAGATCT+TGG | - | chr4.2:24779079-24779098 | MS.gene39652:intron | 30.0% | |
| AAGCATATTCAAAATCAACC+AGG | - | chr4.2:24777556-24777575 | MS.gene39652:intron | 30.0% | |
| AATATGACGCAATGGTATAT+TGG | + | chr4.2:24780480-24780499 | None:intergenic | 30.0% | |
| AATCTTCAAGGATGATTGTT+TGG | + | chr4.2:24779531-24779550 | None:intergenic | 30.0% | |
| ACATAATGACTTAATACGAG+AGG | + | chr4.2:24780869-24780888 | None:intergenic | 30.0% | |
| ACTTCATAAGAACAATAACC+AGG | + | chr4.2:24777806-24777825 | None:intergenic | 30.0% | |
| AGCATTTGAAAATTCTAACG+AGG | - | chr4.2:24779809-24779828 | MS.gene39652:intron | 30.0% | |
| AGTACTTGTGTTAAACTTGA+TGG | - | chr4.2:24781398-24781417 | MS.gene39652:intron | 30.0% | |
| AGTTGTAGCAAATTTGTGTT+TGG | - | chr4.2:24777396-24777415 | MS.gene39652:intron | 30.0% | |
| ATACTAGATCAGATTCAGAT+GGG | + | chr4.2:24780243-24780262 | None:intergenic | 30.0% | |
| ATCAAGTTTAACACAAGTAC+TGG | + | chr4.2:24781399-24781418 | None:intergenic | 30.0% | |
| ATCATATCTATGTGAGAGAA+AGG | - | chr4.2:24781232-24781251 | MS.gene39652:CDS | 30.0% | |
| ATCTTCAAGGATGATTGTTT+GGG | + | chr4.2:24779530-24779549 | None:intergenic | 30.0% | |
| ATTCACAAGCTAGATGATTA+TGG | - | chr4.2:24777527-24777546 | MS.gene39652:intron | 30.0% | |
| ATTTATTTACATTGCACCGA+AGG | - | chr4.2:24780890-24780909 | MS.gene39652:intron | 30.0% | |
| ATTTGAAAATTCTAACGAGG+AGG | - | chr4.2:24779812-24779831 | MS.gene39652:intron | 30.0% | |
| CATAATGACTTAATACGAGA+GGG | + | chr4.2:24780868-24780887 | None:intergenic | 30.0% | |
| GAAACAAAAGTTCAAGAAAG+TGG | + | chr4.2:24779422-24779441 | None:intergenic | 30.0% | |
| GAAAGACCTCAAATTCTAAA+AGG | - | chr4.2:24782107-24782126 | MS.gene39652:CDS | 30.0% | |
| GCAAAATCTTGAATATTTGG+AGG | + | chr4.2:24780677-24780696 | None:intergenic | 30.0% | |
| GGAAAGGAAGAAACAAAAAA+TGG | + | chr4.2:24779281-24779300 | None:intergenic | 30.0% | |
| GGAGCAAAATCTTGAATATT+TGG | + | chr4.2:24780680-24780699 | None:intergenic | 30.0% | |
| GGGAAAATAGAGAAATCAAA+GGG | + | chr4.2:24779260-24779279 | None:intergenic | 30.0% | |
| GTTATTAGTTCATTCAATGC+AGG | - | chr4.2:24777843-24777862 | MS.gene39652:intron | 30.0% | |
| TAAATGTGCAAAATCCAGTA+TGG | - | chr4.2:24779629-24779648 | MS.gene39652:intron | 30.0% | |
| TATAGTAGAATATGACGCAA+TGG | + | chr4.2:24780488-24780507 | None:intergenic | 30.0% | |
| TCATATCTATGTGAGAGAAA+GGG | - | chr4.2:24781233-24781252 | MS.gene39652:CDS | 30.0% | |
| TCATCCTTGAAGATTTATAC+TGG | - | chr4.2:24779536-24779555 | MS.gene39652:intron | 30.0% | |
| TGAATTTCCATGTATAATGG+TGG | - | chr4.2:24780519-24780538 | MS.gene39652:CDS | 30.0% | |
| TGAGTTATCTTCTTAATAGG+TGG | - | chr4.2:24781040-24781059 | MS.gene39652:intron | 30.0% | |
| TGCTGAGTTATCTTCTTAAT+AGG | - | chr4.2:24781037-24781056 | MS.gene39652:intron | 30.0% | |
| TGGGAAAATAGAGAAATCAA+AGG | + | chr4.2:24779261-24779280 | None:intergenic | 30.0% | |
| TTCAGTGACAAGTTTAATCA+TGG | - | chr4.2:24777740-24777759 | MS.gene39652:intron | 30.0% | |
| TTTCTTTGTCATTGTCTACT+AGG | - | chr4.2:24778547-24778566 | MS.gene39652:CDS | 30.0% | |
| ! | AAGCTCAATTTTGGATAACT+TGG | - | chr4.2:24780095-24780114 | MS.gene39652:intron | 30.0% |
| ! | AATTATGGTGTTAAGTCCTT+CGG | + | chr4.2:24780909-24780928 | None:intergenic | 30.0% |
| ! | AGAATGCAAAGTATTAATGC+AGG | + | chr4.2:24780284-24780303 | None:intergenic | 30.0% |
| ! | ATTATTCTATTTTGTCGCAG+TGG | - | chr4.2:24779749-24779768 | MS.gene39652:intron | 30.0% |
| ! | GAAACTTTTGTGGTTTAATG+TGG | - | chr4.2:24778310-24778329 | MS.gene39652:intron | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | + | chr4.2:24778137-24778156 | None:intergenic | 30.0% |
| ! | GACTTTTCATATCGAATTGT+TGG | + | chr4.2:24779590-24779609 | None:intergenic | 30.0% |
| ! | GCATTATCTTGTTTGGAATA+CGG | - | chr4.2:24778900-24778919 | MS.gene39652:intron | 30.0% |
| ! | GGATGTAAATTTGGGTTTAA+TGG | - | chr4.2:24777886-24777905 | MS.gene39652:intron | 30.0% |
| ! | TGGTTTTTGATAGAACGTTA+TGG | - | chr4.2:24778176-24778195 | MS.gene39652:intron | 30.0% |
| ! | TTAATAGGTGGAAGTATGAA+GGG | - | chr4.2:24781052-24781071 | MS.gene39652:intron | 30.0% |
| ! | TTAGAGTTGAAGCTCAATTT+TGG | - | chr4.2:24780086-24780105 | MS.gene39652:intron | 30.0% |
| ! | TTTAGAATTTGAGGTCTTTC+AGG | + | chr4.2:24782107-24782126 | None:intergenic | 30.0% |
| ! | TTTTGCTGCATTATCTTGTT+TGG | - | chr4.2:24778893-24778912 | MS.gene39652:intron | 30.0% |
| ! | TTTTGTGGTTTATTTCCTGA+TGG | - | chr4.2:24777598-24777617 | MS.gene39652:intron | 30.0% |
| !! | ATAGGTACCATAATGGATTT+AGG | + | chr4.2:24781922-24781941 | None:intergenic | 30.0% |
| !! | ATGCTTTTTGAAAGAATTGG+TGG | - | chr4.2:24779447-24779466 | MS.gene39652:intron | 30.0% |
| !! | ATGGTGGAAAATTTTATAGC+GGG | - | chr4.2:24780535-24780554 | MS.gene39652:CDS | 30.0% |
| !! | TAGGTACCATAATGGATTTA+GGG | + | chr4.2:24781921-24781940 | None:intergenic | 30.0% |
| !! | TATCTTCTCTCATTTTTGAC+TGG | - | chr4.2:24778362-24778381 | MS.gene39652:intron | 30.0% |
| !! | TGCTTTTTGAAAGAATTGGT+GGG | - | chr4.2:24779448-24779467 | MS.gene39652:intron | 30.0% |
| !! | TTTTGACTGGATTTAAAACC+AGG | - | chr4.2:24778375-24778394 | MS.gene39652:intron | 30.0% |
| !!! | AAACACTTTTGAGACTGTTA+GGG | + | chr4.2:24781859-24781878 | None:intergenic | 30.0% |
| !!! | CGAGATGTTTGTTTTTTCTA+GGG | + | chr4.2:24778748-24778767 | None:intergenic | 30.0% |
| !!! | TAAACACTTTTGAGACTGTT+AGG | + | chr4.2:24781860-24781879 | None:intergenic | 30.0% |
| !!! | TCGAGATGTTTGTTTTTTCT+AGG | + | chr4.2:24778749-24778768 | None:intergenic | 30.0% |
| AAAAGGTGGCGATAAATTGA+AGG | - | chr4.2:24782124-24782143 | MS.gene39652:CDS | 35.0% | |
| AAACTTTGGCAATTGCATTG+CGG | + | chr4.2:24780064-24780083 | None:intergenic | 35.0% | |
| AACAGACCCTAAATCCATTA+TGG | - | chr4.2:24781912-24781931 | MS.gene39652:intron | 35.0% | |
| AACGCCAGTATAAATCTTCA+AGG | + | chr4.2:24779543-24779562 | None:intergenic | 35.0% | |
| AAGATAATGCAGCAAAAGTG+GGG | + | chr4.2:24778890-24778909 | None:intergenic | 35.0% | |
| AATCTTGATGCCAAGATCTA+TGG | + | chr4.2:24779092-24779111 | None:intergenic | 35.0% | |
| ACAAGATAATGCAGCAAAAG+TGG | + | chr4.2:24778892-24778911 | None:intergenic | 35.0% | |
| ACATGTGGAATAGTTGTTCA+AGG | - | chr4.2:24779933-24779952 | MS.gene39652:intron | 35.0% | |
| ACCACAAGTGCTACAAATAA+AGG | + | chr4.2:24777050-24777069 | None:intergenic | 35.0% | |
| ACCAGTTTCAGTTTCAACAA+CGG | - | chr4.2:24776995-24777014 | MS.gene39652:CDS | 35.0% | |
| ACTCTTATGGTAGTTGTCAT+AGG | - | chr4.2:24778772-24778791 | MS.gene39652:intron | 35.0% | |
| AGATTAAGAACAGCTTAACC+TGG | + | chr4.2:24777577-24777596 | None:intergenic | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | - | chr4.2:24778144-24778163 | MS.gene39652:CDS | 35.0% | |
| AGGATGCTGTTACATATTCA+AGG | - | chr4.2:24777249-24777268 | MS.gene39652:intron | 35.0% | |
| ATAGTTCCATGGAAATGTGT+GGG | - | chr4.2:24778279-24778298 | MS.gene39652:intron | 35.0% | |
| ATGGTACATTGGGTAGTAAA+TGG | - | chr4.2:24780341-24780360 | MS.gene39652:intron | 35.0% | |
| ATTAAGCTGTTTACCCAAAC+AGG | + | chr4.2:24781669-24781688 | None:intergenic | 35.0% | |
| ATTACTTCAAACTTGGCACA+AGG | + | chr4.2:24782248-24782267 | None:intergenic | 35.0% | |
| ATTAGAGAGAGAAACTTGTG+AGG | - | chr4.2:24777211-24777230 | MS.gene39652:intron | 35.0% | |
| ATTCTTCATCTGACAGGATT+AGG | + | chr4.2:24779172-24779191 | None:intergenic | 35.0% | |
| CAAAAGTTCAAGAAAGTGGA+AGG | + | chr4.2:24779418-24779437 | None:intergenic | 35.0% | |
| CAAGATAATGCAGCAAAAGT+GGG | + | chr4.2:24778891-24778910 | None:intergenic | 35.0% | |
| CAGATCTAGCAATTTAACTC+TGG | - | chr4.2:24782019-24782038 | MS.gene39652:intron | 35.0% | |
| CATATCTATGTGAGAGAAAG+GGG | - | chr4.2:24781234-24781253 | MS.gene39652:CDS | 35.0% | |
| CATGTGGAATAGTTGTTCAA+GGG | - | chr4.2:24779934-24779953 | MS.gene39652:intron | 35.0% | |
| CCCATGAAAAATATCCAACA+GGG | + | chr4.2:24778617-24778636 | None:intergenic | 35.0% | |
| CTGATGGAGAAAAAACCAAA+TGG | + | chr4.2:24780022-24780041 | None:intergenic | 35.0% | |
| CTGGTAAATGAAAGTAAGAG+AGG | + | chr4.2:24779898-24779917 | None:intergenic | 35.0% | |
| CTTTATACCTTCCAGTTCAA+CGG | - | chr4.2:24782188-24782207 | MS.gene39652:CDS | 35.0% | |
| GAAGGACTTAACACCATAAT+TGG | - | chr4.2:24780908-24780927 | MS.gene39652:intron | 35.0% | |
| GATACTAGATCAGATTCAGA+TGG | + | chr4.2:24780244-24780263 | None:intergenic | 35.0% | |
| GATCTAGTATCAGTGTCTAT+TGG | - | chr4.2:24780253-24780272 | MS.gene39652:intron | 35.0% | |
| GGATTAGGCATTAAGTTTAC+AGG | + | chr4.2:24779157-24779176 | None:intergenic | 35.0% | |
| GGTTTACAAAATATACCCTG+CGG | - | chr4.2:24782145-24782164 | MS.gene39652:CDS | 35.0% | |
| GTTCAGTGGGATGTAAATTT+GGG | - | chr4.2:24777878-24777897 | MS.gene39652:intron | 35.0% | |
| GTTTACAAAATATACCCTGC+GGG | - | chr4.2:24782146-24782165 | MS.gene39652:CDS | 35.0% | |
| TAAAGCAGCATTGTCTAAGA+TGG | + | chr4.2:24780212-24780231 | None:intergenic | 35.0% | |
| TAGTTCATTCAATGCAGGAA+TGG | - | chr4.2:24777848-24777867 | MS.gene39652:intron | 35.0% | |
| TATAGTTCCATGGAAATGTG+TGG | - | chr4.2:24778278-24778297 | MS.gene39652:intron | 35.0% | |
| TATTCACATATGTTACCTCC+TGG | - | chr4.2:24777785-24777804 | MS.gene39652:intron | 35.0% | |
| TCATAAGAACAATAACCAGG+AGG | + | chr4.2:24777803-24777822 | None:intergenic | 35.0% | |
| TGAAACTGGTAAACCTTCTT+GGG | + | chr4.2:24776985-24777004 | None:intergenic | 35.0% | |
| TGTTCAGTGGGATGTAAATT+TGG | - | chr4.2:24777877-24777896 | MS.gene39652:intron | 35.0% | |
| TGTTTCTTCCTTTCCTTCTT+GGG | - | chr4.2:24779286-24779305 | MS.gene39652:intron | 35.0% | |
| TTAAGCTGTTTACCCAAACA+GGG | + | chr4.2:24781668-24781687 | None:intergenic | 35.0% | |
| TTTATACCTTCCAGTTCAAC+GGG | - | chr4.2:24782189-24782208 | MS.gene39652:CDS | 35.0% | |
| TTTGTCATTGTCTACTAGGA+GGG | - | chr4.2:24778551-24778570 | MS.gene39652:CDS | 35.0% | |
| ! | AGACCTCAAATTCTAAAAGG+TGG | - | chr4.2:24782110-24782129 | MS.gene39652:CDS | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr4.2:24778156-24778175 | MS.gene39652:intron | 35.0% |
| ! | CCCTGTTGGATATTTTTCAT+GGG | - | chr4.2:24778614-24778633 | MS.gene39652:intron | 35.0% |
| ! | CTTAATAGGTGGAAGTATGA+AGG | - | chr4.2:24781051-24781070 | MS.gene39652:intron | 35.0% |
| ! | GAACAATTTCAAGTCCATAC+TGG | + | chr4.2:24779646-24779665 | None:intergenic | 35.0% |
| ! | GCAAATCAATCTCTTGTTGT+AGG | - | chr4.2:24780629-24780648 | MS.gene39652:CDS | 35.0% |
| ! | GCTGTTCTTAATCTGTTTTG+TGG | - | chr4.2:24777583-24777602 | MS.gene39652:intron | 35.0% |
| ! | TCCCTGTTGGATATTTTTCA+TGG | - | chr4.2:24778613-24778632 | MS.gene39652:intron | 35.0% |
| ! | TGGTGGAAAATTTTATAGCG+GGG | - | chr4.2:24780536-24780555 | MS.gene39652:CDS | 35.0% |
| ! | TGGTTGAAGGTGATGATTTT+GGG | - | chr4.2:24777156-24777175 | MS.gene39652:CDS | 35.0% |
| ! | TGTATGGTTCTATAGTTCCA+TGG | - | chr4.2:24778268-24778287 | MS.gene39652:intron | 35.0% |
| ! | TTAAACTTGATGGCATCTCT+TGG | - | chr4.2:24781408-24781427 | MS.gene39652:intron | 35.0% |
| ! | TTATCTTGTTTGGAATACGG+AGG | - | chr4.2:24778903-24778922 | MS.gene39652:intron | 35.0% |
| ! | TTGTTTCTTCCTTTCCTTCT+TGG | - | chr4.2:24779285-24779304 | MS.gene39652:intron | 35.0% |
| !! | GCTTTTTGAAAGAATTGGTG+GGG | - | chr4.2:24779449-24779468 | MS.gene39652:intron | 35.0% |
| !! | TGCAGAAGAAGTTTTGTAAG+AGG | + | chr4.2:24780612-24780631 | None:intergenic | 35.0% |
| !! | TGTTGATTTCAGAAGTCACT+TGG | - | chr4.2:24782214-24782233 | MS.gene39652:CDS | 35.0% |
| !!! | AAGGAACCTGTTTTTGTTTC+TGG | - | chr4.2:24777281-24777300 | MS.gene39652:intron | 35.0% |
| !!! | GCAAGAGCTTTTTCAGTTTT+TGG | + | chr4.2:24778669-24778688 | None:intergenic | 35.0% |
| !!! | GCTGCTTTTATTTCCAATTG+TGG | - | chr4.2:24778690-24778709 | MS.gene39652:intron | 35.0% |
| !!! | TGTTTTTGGCAGCCAAAATA+TGG | - | chr4.2:24777706-24777725 | MS.gene39652:intron | 35.0% |
| !!! | TTTTGGTTCTTGCTTCCATT+TGG | - | chr4.2:24780004-24780023 | MS.gene39652:intron | 35.0% |
| AAAGTCTATAGCTCACCATC+AGG | + | chr4.2:24777616-24777635 | None:intergenic | 40.0% | |
| ACAACAACAACAACCCAAGA+AGG | - | chr4.2:24776969-24776988 | MS.gene39652:CDS | 40.0% | |
| ACCGTTGTTGAAACTGAAAC+TGG | + | chr4.2:24776999-24777018 | None:intergenic | 40.0% | |
| AGAAAGGGGAACATTTGAGA+TGG | - | chr4.2:24781248-24781267 | MS.gene39652:CDS | 40.0% | |
| AGATGGAGTCCATTTACTTG+AGG | - | chr4.2:24781265-24781284 | MS.gene39652:CDS | 40.0% | |
| AGTTGTCATAGGAATCGTGA+TGG | - | chr4.2:24778783-24778802 | MS.gene39652:intron | 40.0% | |
| ATGGCATCTCTTGGTTTCTT+TGG | - | chr4.2:24781417-24781436 | MS.gene39652:intron | 40.0% | |
| CATTCTGTGAATGAGCTTTG+AGG | - | chr4.2:24780298-24780317 | MS.gene39652:intron | 40.0% | |
| CCATACAGGAACATGATTCA+GGG | + | chr4.2:24782081-24782100 | None:intergenic | 40.0% | |
| CTGAAACTGGTAAACCTTCT+TGG | + | chr4.2:24776986-24777005 | None:intergenic | 40.0% | |
| CTTTGTCATTGTCTACTAGG+AGG | - | chr4.2:24778550-24778569 | MS.gene39652:CDS | 40.0% | |
| GAAATTTCGAGCACCACAAT+TGG | + | chr4.2:24778706-24778725 | None:intergenic | 40.0% | |
| GAATGGAAGTCATGTTCAGT+GGG | - | chr4.2:24777865-24777884 | MS.gene39652:intron | 40.0% | |
| GCCCATGAAAAATATCCAAC+AGG | + | chr4.2:24778618-24778637 | None:intergenic | 40.0% | |
| TAGTTCCATGGAAATGTGTG+GGG | - | chr4.2:24778280-24778299 | MS.gene39652:intron | 40.0% | |
| TCAGCTCCAGAAACAAAAAC+AGG | + | chr4.2:24777290-24777309 | None:intergenic | 40.0% | |
| TCCATACAGGAACATGATTC+AGG | + | chr4.2:24782082-24782101 | None:intergenic | 40.0% | |
| TGATTAGCACTCGCAATGAA+AGG | + | chr4.2:24778405-24778424 | None:intergenic | 40.0% | |
| TGATTCTTTCAAAGCCCTTG+TGG | - | chr4.2:24781080-24781099 | MS.gene39652:intron | 40.0% | |
| TGTAGCACTTGTGGTTATTG+CGG | - | chr4.2:24777055-24777074 | MS.gene39652:CDS | 40.0% | |
| TTATACCTTCCAGTTCAACG+GGG | - | chr4.2:24782190-24782209 | MS.gene39652:CDS | 40.0% | |
| TTCCTTCTCTCTACTCTTTG+TGG | + | chr4.2:24781151-24781170 | None:intergenic | 40.0% | |
| TTGTCATTGTCTACTAGGAG+GGG | - | chr4.2:24778552-24778571 | MS.gene39652:CDS | 40.0% | |
| TTTCAAAGCCCTTGTGGATA+TGG | - | chr4.2:24781086-24781105 | MS.gene39652:intron | 40.0% | |
| TTTGAAAGAATTGGTGGGGT+TGG | - | chr4.2:24779453-24779472 | MS.gene39652:intron | 40.0% | |
| ! | AACATCTCGATCGACTCTTA+TGG | - | chr4.2:24778759-24778778 | MS.gene39652:intron | 40.0% |
| ! | AATTTGGGTTTAATGGGGAC+CGG | - | chr4.2:24777893-24777912 | MS.gene39652:intron | 40.0% |
| ! | CGTGTCCATAAGTTCTTTTC+TGG | + | chr4.2:24781812-24781831 | None:intergenic | 40.0% |
| ! | GCCTTTATTTGTAGCACTTG+TGG | - | chr4.2:24777046-24777065 | MS.gene39652:CDS | 40.0% |
| ! | GGGTAATGCAGAAACTTTTG+TGG | - | chr4.2:24778300-24778319 | MS.gene39652:intron | 40.0% |
| ! | GGTGGAAAATTTTATAGCGG+GGG | - | chr4.2:24780537-24780556 | MS.gene39652:CDS | 40.0% |
| ! | GTGGTTGAAGGTGATGATTT+TGG | - | chr4.2:24777155-24777174 | MS.gene39652:CDS | 40.0% |
| ! | GTTTTCTGCTAGGTATCTCA+TGG | + | chr4.2:24780762-24780781 | None:intergenic | 40.0% |
| !! | AGGGCTTTGAAAGAATCAGA+TGG | + | chr4.2:24781078-24781097 | None:intergenic | 40.0% |
| !! | AGTTGGTGGTGGTAAGAATT+TGG | - | chr4.2:24777187-24777206 | MS.gene39652:intron | 40.0% |
| !! | GAAAATTTTATAGCGGGGGT+TGG | - | chr4.2:24780541-24780560 | MS.gene39652:CDS | 40.0% |
| !! | GCAAATTTGTGTTTGGTGTC+TGG | - | chr4.2:24777403-24777422 | MS.gene39652:intron | 40.0% |
| !! | TGCAAGTGTTCTGAGATCAA+TGG | - | chr4.2:24777957-24777976 | MS.gene39652:CDS | 40.0% |
| !!! | ATCACGCGTTTTTTATCTGC+AGG | - | chr4.2:24777639-24777658 | MS.gene39652:intron | 40.0% |
| !!! | GATTTTGGGTTAGAGACAGT+TGG | - | chr4.2:24777170-24777189 | MS.gene39652:CDS | 40.0% |
| !!! | GTTTTTGGGTAGGTTGGATA+TGG | - | chr4.2:24777085-24777104 | MS.gene39652:CDS | 40.0% |
| !!! | TCGCCACCTTTTAGAATTTG+AGG | + | chr4.2:24782116-24782135 | None:intergenic | 40.0% |
| !!! | TTTTGTTTCTGGAGCTGAAC+AGG | - | chr4.2:24777292-24777311 | MS.gene39652:intron | 40.0% |
| AAAGTCTGGACTACTGATGC+AGG | + | chr4.2:24779314-24779333 | None:intergenic | 45.0% | |
| AAGGTCGCTTCTTGAAGTCT+GGG | + | chr4.2:24781182-24781201 | None:intergenic | 45.0% | |
| AATCAACATCCCCGTTGAAC+TGG | + | chr4.2:24782202-24782221 | None:intergenic | 45.0% | |
| AGAAACTTGTGAGGAGTGGT+TGG | - | chr4.2:24777220-24777239 | MS.gene39652:intron | 45.0% | |
| AGAGAGAAACTTGTGAGGAG+TGG | - | chr4.2:24777216-24777235 | MS.gene39652:intron | 45.0% | |
| AGAGTCAGATGACCCTGTTT+GGG | - | chr4.2:24781653-24781672 | MS.gene39652:CDS | 45.0% | |
| AGCTAAATTTGTAGCGCGTC+AGG | + | chr4.2:24779788-24779807 | None:intergenic | 45.0% | |
| ATACGAGAGGGATGCAGAAA+AGG | + | chr4.2:24780856-24780875 | None:intergenic | 45.0% | |
| ATACGGAGGAACAAAGTCAC+TGG | - | chr4.2:24778917-24778936 | MS.gene39652:intron | 45.0% | |
| CAACGGTTCCGAAGAAGAAA+TGG | - | chr4.2:24777012-24777031 | MS.gene39652:CDS | 45.0% | |
| CAGAGTCAGATGACTCTGTT+TGG | - | chr4.2:24781494-24781513 | MS.gene39652:intron | 45.0% | |
| CAGTAGTCCAGACTTTCTGT+TGG | - | chr4.2:24779318-24779337 | MS.gene39652:intron | 45.0% | |
| CATTACCCCACACATTTCCA+TGG | + | chr4.2:24778288-24778307 | None:intergenic | 45.0% | |
| CCCTGAATCATGTTCCTGTA+TGG | - | chr4.2:24782078-24782097 | MS.gene39652:CDS | 45.0% | |
| CGTAAGAACAGCAGTCTTGA+AGG | + | chr4.2:24782048-24782067 | None:intergenic | 45.0% | |
| CTGGGCATCTTGAGCTTATT+TGG | - | chr4.2:24780956-24780975 | MS.gene39652:intron | 45.0% | |
| CTGGGTTGTAGATCGTAACA+TGG | - | chr4.2:24778936-24778955 | MS.gene39652:intron | 45.0% | |
| GCTAAATTTGTAGCGCGTCA+GGG | + | chr4.2:24779787-24779806 | None:intergenic | 45.0% | |
| GGAATGGAAGTCATGTTCAG+TGG | - | chr4.2:24777864-24777883 | MS.gene39652:intron | 45.0% | |
| TACAGCTGCCATATCCACAA+GGG | + | chr4.2:24781097-24781116 | None:intergenic | 45.0% | |
| TACGGAGGAACAAAGTCACT+GGG | - | chr4.2:24778918-24778937 | MS.gene39652:intron | 45.0% | |
| TATGGCTAAGAACGCAGCTA+TGG | - | chr4.2:24777103-24777122 | MS.gene39652:CDS | 45.0% | |
| TGCAGAGAACAATCTTGCCA+TGG | - | chr4.2:24777996-24778015 | MS.gene39652:CDS | 45.0% | |
| TGCTAGGTATCTCATGGACT+TGG | + | chr4.2:24780756-24780775 | None:intergenic | 45.0% | |
| TGTTGTAGGAACTATCCCTG+TGG | - | chr4.2:24780643-24780662 | MS.gene39652:intron | 45.0% | |
| TTCTGCACCAACAGAAAGTC+TGG | + | chr4.2:24779328-24779347 | None:intergenic | 45.0% | |
| TTGTGGCCAAGTGAATGCAA+AGG | + | chr4.2:24781134-24781153 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr4.2:24778225-24778244 | None:intergenic | 45.0% |
| ! | AGAGCATCTCTTGGTTTCTC+TGG | - | chr4.2:24781575-24781594 | MS.gene39652:intron | 45.0% |
| ! | ATGCTTCAGGGTTTTCTGCT+AGG | + | chr4.2:24780772-24780791 | None:intergenic | 45.0% |
| ! | ATGGGCTGAGTATGACATCA+TGG | - | chr4.2:24778632-24778651 | MS.gene39652:intron | 45.0% |
| ! | ATTGCGGAGATCGCGTTTTT+GGG | - | chr4.2:24777071-24777090 | MS.gene39652:CDS | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr4.2:24778226-24778245 | None:intergenic | 45.0% |
| ! | CATAGGAATCGTGATGGAAG+AGG | - | chr4.2:24778789-24778808 | MS.gene39652:intron | 45.0% |
| ! | GTTATTTCCACAAGCTCTCC+AGG | + | chr4.2:24781790-24781809 | None:intergenic | 45.0% |
| ! | TATTGCGGAGATCGCGTTTT+TGG | - | chr4.2:24777070-24777089 | MS.gene39652:CDS | 45.0% |
| ! | TCAGACTTCAGAGCATCTCT+TGG | - | chr4.2:24781566-24781585 | MS.gene39652:intron | 45.0% |
| ! | TTTGGGTTAGAGACAGTTGG+TGG | - | chr4.2:24777173-24777192 | MS.gene39652:CDS | 45.0% |
| ! | TTTTGTCGCAGTGGACAAAC+TGG | - | chr4.2:24779758-24779777 | MS.gene39652:intron | 45.0% |
| !! | TGGTTGCTGACTTGTTCTAC+CGG | - | chr4.2:24777123-24777142 | MS.gene39652:CDS | 45.0% |
| !! | TTTTTCCAGTCGCTTGTTGC+TGG | - | chr4.2:24779852-24779871 | MS.gene39652:intron | 45.0% |
| AACATCCCCGTTGAACTGGA+AGG | + | chr4.2:24782198-24782217 | None:intergenic | 50.0% | |
| AAGCTATCCTGGAGAGCTTG+TGG | - | chr4.2:24781780-24781799 | MS.gene39652:intron | 50.0% | |
| ACAATCTTGCCATGGCACGA+CGG | - | chr4.2:24778004-24778023 | MS.gene39652:CDS | 50.0% | |
| ACTGATGCAGGAACCCAAGA+AGG | + | chr4.2:24779302-24779321 | None:intergenic | 50.0% | |
| AGGGACGTCAGATGATAGAC+TGG | + | chr4.2:24778598-24778617 | None:intergenic | 50.0% | |
| CAAATGCAGCCTCAGGTTTC+CGG | + | chr4.2:24777915-24777934 | None:intergenic | 50.0% | |
| CAAGGTCGCTTCTTGAAGTC+TGG | + | chr4.2:24781183-24781202 | None:intergenic | 50.0% | |
| CACTGGACCTAAAGCATGGT+AGG | - | chr4.2:24779027-24779046 | MS.gene39652:intron | 50.0% | |
| CAGAGTCAGATGACCCTGTT+TGG | - | chr4.2:24781652-24781671 | MS.gene39652:CDS | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr4.2:24778224-24778243 | MS.gene39652:intron | 50.0% | |
| CTATCATCTGACGTCCCTGT+TGG | - | chr4.2:24778600-24778619 | MS.gene39652:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr4.2:24778221-24778240 | None:intergenic | 50.0% | |
| GGAACTATCCCTGTGGTTGT+TGG | - | chr4.2:24780650-24780669 | MS.gene39652:intron | 50.0% | |
| GGCCACAAAGAGTAGAGAGA+AGG | - | chr4.2:24781146-24781165 | MS.gene39652:intron | 50.0% | |
| GGTCTTTCAGGCTTCCATAC+AGG | + | chr4.2:24782095-24782114 | None:intergenic | 50.0% | |
| GTACAGCTGCCATATCCACA+AGG | + | chr4.2:24781098-24781117 | None:intergenic | 50.0% | |
| GTGTGCTCCTACCATGCTTT+AGG | + | chr4.2:24779037-24779056 | None:intergenic | 50.0% | |
| TGCAGGAACCCAAGAAGGAA+AGG | + | chr4.2:24779297-24779316 | None:intergenic | 50.0% | |
| TGCTTTCTGATGAGTGCCAC+TGG | - | chr4.2:24779010-24779029 | MS.gene39652:intron | 50.0% | |
| TGGCCAAGTGAATGCAAAGG+CGG | + | chr4.2:24781131-24781150 | None:intergenic | 50.0% | |
| TTGCCGCCTTTGCATTCACT+TGG | - | chr4.2:24781125-24781144 | MS.gene39652:intron | 50.0% | |
| TTGGAGGACCAACAACCACA+GGG | + | chr4.2:24780661-24780680 | None:intergenic | 50.0% | |
| TTTGGAGGACCAACAACCAC+AGG | + | chr4.2:24780662-24780681 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr4.2:24778227-24778246 | None:intergenic | 50.0% |
| ! | CTACCATGCTTTAGGTCCAG+TGG | + | chr4.2:24779029-24779048 | None:intergenic | 50.0% |
| ! | CTCGCAATGAAAGGTACACC+TGG | + | chr4.2:24778396-24778415 | None:intergenic | 50.0% |
| ! | TTTGGCTTACCTCAGCAAGC+TGG | - | chr4.2:24777931-24777950 | MS.gene39652:intron | 50.0% |
| !!! | GATCGCGTTTTTGGGTAGGT+TGG | - | chr4.2:24777079-24777098 | MS.gene39652:CDS | 50.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr4.2:24778213-24778232 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr4.2:24778212-24778231 | MS.gene39652:intron | 55.0% | |
| CCATACCAGCAACAAGCGAC+TGG | + | chr4.2:24779860-24779879 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr4.2:24778219-24778238 | MS.gene39652:intron | 55.0% | |
| CGGAAACCTGAGGCTGCATT+TGG | - | chr4.2:24777913-24777932 | MS.gene39652:intron | 55.0% | |
| CTTGTTCTACCGGTCACGTG+CGG | - | chr4.2:24777133-24777152 | MS.gene39652:CDS | 55.0% | |
| GACCTTGCAAGTGCACTCGA+GGG | - | chr4.2:24781196-24781215 | MS.gene39652:intron | 55.0% | |
| GGGCTTCGAGAGCTTGCAAT+CGG | + | chr4.2:24778728-24778747 | None:intergenic | 55.0% | |
| GGTAAGCCAAATGCAGCCTC+AGG | + | chr4.2:24777922-24777941 | None:intergenic | 55.0% | |
| TAATGGGGACCGGAAACCTG+AGG | - | chr4.2:24777903-24777922 | MS.gene39652:intron | 55.0% | |
| TGAGGAGTGGTTGGAGAGAG+AGG | - | chr4.2:24777229-24777248 | MS.gene39652:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr4.2:24778213-24778232 | MS.gene39652:intron | 55.0% | |
| ! | CCAGTCGCTTGTTGCTGGTA+TGG | - | chr4.2:24779857-24779876 | MS.gene39652:intron | 55.0% |
| ! | GTGCCACTGGACCTAAAGCA+TGG | - | chr4.2:24779023-24779042 | MS.gene39652:intron | 55.0% |
| !! | CTTGCAGTTCCAGCTTGCTG+AGG | + | chr4.2:24777943-24777962 | None:intergenic | 55.0% |
| !! | GGGTTAGAGACAGTTGGTGG+TGG | - | chr4.2:24777176-24777195 | MS.gene39652:CDS | 55.0% |
| !!! | CGGAGATCGCGTTTTTGGGT+AGG | - | chr4.2:24777075-24777094 | MS.gene39652:CDS | 55.0% |
| ATCTTGCCATGGCACGACGG+TGG | - | chr4.2:24778007-24778026 | MS.gene39652:CDS | 60.0% | |
| CGACCTTGCAAGTGCACTCG+AGG | - | chr4.2:24781195-24781214 | MS.gene39652:intron | 60.0% | |
| CTTCAACCACCGCACGTGAC+CGG | + | chr4.2:24777145-24777164 | None:intergenic | 60.0% | |
| GACCCTCGAGTGCACTTGCA+AGG | + | chr4.2:24781201-24781220 | None:intergenic | 60.0% | |
| TCTTGCCATGGCACGACGGT+GGG | - | chr4.2:24778008-24778027 | MS.gene39652:CDS | 60.0% | |
| ACCCTGCGGGCTTGACACAG+AGG | - | chr4.2:24782159-24782178 | MS.gene39652:CDS | 65.0% | |
| CGGTCACGTGCGGTGGTTGA+AGG | - | chr4.2:24777143-24777162 | MS.gene39652:CDS | 65.0% | |
| GCCTCTGTGTCAAGCCCGCA+GGG | + | chr4.2:24782163-24782182 | None:intergenic | 65.0% | |
| GCTTACCCACCGTCGTGCCA+TGG | + | chr4.2:24778016-24778035 | None:intergenic | 65.0% | |
| GTTCTACCGGTCACGTGCGG+TGG | - | chr4.2:24777136-24777155 | MS.gene39652:CDS | 65.0% | |
| TGCCTCTGTGTCAAGCCCGC+AGG | + | chr4.2:24782164-24782183 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 24776945 | 24782277 | 24776945 | ID=MS.gene39652 |
| chr4.2 | mRNA | 24776945 | 24782277 | 24776945 | ID=MS.gene39652.t1;Parent=MS.gene39652 |
| chr4.2 | exon | 24782025 | 24782277 | 24782025 | ID=MS.gene39652.t1.exon1;Parent=MS.gene39652.t1 |
| chr4.2 | CDS | 24782025 | 24782277 | 24782025 | ID=cds.MS.gene39652.t1;Parent=MS.gene39652.t1 |
| chr4.2 | exon | 24781603 | 24781682 | 24781603 | ID=MS.gene39652.t1.exon2;Parent=MS.gene39652.t1 |
| chr4.2 | CDS | 24781603 | 24781682 | 24781603 | ID=cds.MS.gene39652.t1;Parent=MS.gene39652.t1 |
| chr4.2 | exon | 24781197 | 24781357 | 24781197 | ID=MS.gene39652.t1.exon3;Parent=MS.gene39652.t1 |
| chr4.2 | CDS | 24781197 | 24781357 | 24781197 | ID=cds.MS.gene39652.t1;Parent=MS.gene39652.t1 |
| chr4.2 | exon | 24780412 | 24780653 | 24780412 | ID=MS.gene39652.t1.exon4;Parent=MS.gene39652.t1 |
| chr4.2 | CDS | 24780412 | 24780653 | 24780412 | ID=cds.MS.gene39652.t1;Parent=MS.gene39652.t1 |
| chr4.2 | exon | 24779349 | 24779453 | 24779349 | ID=MS.gene39652.t1.exon5;Parent=MS.gene39652.t1 |
| chr4.2 | CDS | 24779349 | 24779453 | 24779349 | ID=cds.MS.gene39652.t1;Parent=MS.gene39652.t1 |
| chr4.2 | exon | 24778415 | 24778571 | 24778415 | ID=MS.gene39652.t1.exon6;Parent=MS.gene39652.t1 |
| chr4.2 | CDS | 24778415 | 24778571 | 24778415 | ID=cds.MS.gene39652.t1;Parent=MS.gene39652.t1 |
| chr4.2 | exon | 24777936 | 24778163 | 24777936 | ID=MS.gene39652.t1.exon7;Parent=MS.gene39652.t1 |
| chr4.2 | CDS | 24777936 | 24778163 | 24777936 | ID=cds.MS.gene39652.t1;Parent=MS.gene39652.t1 |
| chr4.2 | exon | 24776945 | 24777200 | 24776945 | ID=MS.gene39652.t1.exon8;Parent=MS.gene39652.t1 |
| chr4.2 | CDS | 24776945 | 24777200 | 24776945 | ID=cds.MS.gene39652.t1;Parent=MS.gene39652.t1 |
| Gene Sequence |
| Protein sequence |
