AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene39787

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene39787.t1 MTR_5g088320 100.000 149 0 0 1 149 1 149 2.32e-106 300
MS.gene39787.t1 MTR_6g025320 99.329 149 1 0 1 149 1 149 8.38e-106 298
MS.gene39787.t1 MTR_7g087610 97.987 149 3 0 1 149 1 149 8.99e-104 293
MS.gene39787.t1 MTR_1g076650 78.378 148 32 0 1 148 1 148 1.28e-83 242
MS.gene39787.t1 MTR_1g076650 45.070 71 36 1 82 149 6 76 2.66e-11 58.2
MS.gene39787.t1 MTR_1g041285 77.703 148 33 0 1 148 1 148 1.79e-82 239
MS.gene39787.t1 MTR_1g041285 47.692 65 34 0 85 149 12 76 5.34e-12 60.1
MS.gene39787.t1 MTR_0168s0120 100.000 113 0 0 37 149 1 113 9.30e-79 228
MS.gene39787.t1 MTR_0168s0120 47.692 65 34 0 12 76 49 113 1.58e-13 63.2
MS.gene39787.t1 MTR_6g025320 100.000 113 0 0 37 149 1 113 9.30e-79 228
MS.gene39787.t1 MTR_6g025320 47.692 65 34 0 12 76 49 113 1.58e-13 63.2
MS.gene39787.t1 MTR_7g115040 63.514 148 54 0 1 148 1 148 5.71e-58 177
MS.gene39787.t1 MTR_1g071150 57.823 147 61 1 1 147 1 146 2.44e-56 173
MS.gene39787.t1 MTR_1g071150 40.260 77 45 1 73 149 1 76 6.14e-12 60.1
MS.gene39787.t1 MTR_5g011850 50.336 149 72 1 1 149 1 147 1.89e-48 153
MS.gene39787.t1 MTR_3g055570 53.425 146 53 1 1 146 41 171 9.78e-44 142
MS.gene39787.t1 MTR_8g066630 46.622 148 76 1 4 148 9 156 1.09e-43 142
MS.gene39787.t1 MTR_7g074020 45.455 143 78 0 4 146 22 164 2.00e-39 131
MS.gene39787.t1 MTR_7g074020 46.970 66 35 0 84 149 29 94 2.98e-12 61.2
MS.gene39787.t1 MTR_6g007613 44.056 143 80 0 4 146 21 163 1.89e-37 126
MS.gene39787.t1 MTR_6g007613 43.421 76 43 0 74 149 18 93 1.93e-12 61.6
MS.gene39787.t1 MTR_1g032070 48.551 138 71 0 12 149 46 183 3.88e-37 126
MS.gene39787.t1 MTR_1g032070 51.613 62 30 0 84 145 45 106 6.81e-15 68.9
MS.gene39787.t1 MTR_1g032070 49.254 67 34 0 7 73 114 180 2.01e-12 62.0
MS.gene39787.t1 MTR_3g055520 46.897 145 62 1 1 145 41 170 5.84e-37 125
MS.gene39787.t1 MTR_4g112460 42.553 141 79 1 8 146 7 147 8.91e-36 122
MS.gene39787.t1 MTR_4g112460 46.875 64 34 0 16 79 90 153 1.35e-12 62.0
MS.gene39787.t1 MTR_7g074020 47.244 127 67 0 4 130 22 148 1.05e-35 121
MS.gene39787.t1 MTR_7g074020 46.970 66 35 0 84 149 29 94 1.86e-12 61.6
MS.gene39787.t1 MTR_3g055585 46.207 145 63 1 1 145 41 170 7.82e-35 119
MS.gene39787.t1 MTR_8g105230 48.855 131 67 0 12 142 36 166 8.51e-34 117
MS.gene39787.t1 MTR_8g105230 56.250 64 28 0 6 69 103 166 1.19e-16 73.2
MS.gene39787.t1 MTR_6g007613 45.669 127 69 0 4 130 21 147 9.27e-34 116
MS.gene39787.t1 MTR_6g007613 43.421 76 43 0 74 149 18 93 9.86e-13 62.4
MS.gene39787.t1 MTR_8g069915 41.958 143 81 1 6 146 6 148 2.08e-33 115
MS.gene39787.t1 MTR_4g067270 44.928 138 74 1 11 146 4 141 6.29e-33 114
MS.gene39787.t1 MTR_8g107110 44.444 135 74 1 12 146 24 157 8.20e-32 111
MS.gene39787.t1 MTR_8g107110 43.284 67 38 0 7 73 91 157 2.77e-12 61.2
MS.gene39787.t1 MTR_3g055490 68.000 75 24 0 1 75 41 115 2.01e-31 108
MS.gene39787.t1 MTR_5g079340 42.963 135 76 1 12 146 4 137 1.02e-30 108
MS.gene39787.t1 MTR_3g067610 42.963 135 73 1 12 146 5 135 1.80e-28 102
MS.gene39787.t1 MTR_3g067610 43.750 64 36 0 12 75 74 137 6.75e-13 62.4
MS.gene39787.t1 MTR_1g046950 39.416 137 81 1 12 146 4 140 4.31e-28 101
MS.gene39787.t1 MTR_1g046950 43.750 64 36 0 12 75 79 142 3.32e-12 60.5
MS.gene39787.t1 MTR_7g106710 41.781 146 82 2 1 146 429 571 2.47e-27 106
MS.gene39787.t1 MTR_5g092810 40.940 149 84 3 1 148 386 531 2.84e-27 106
MS.gene39787.t1 MTR_6g079570 40.288 139 81 2 12 149 26 163 3.34e-27 100
MS.gene39787.t1 MTR_6g079570 43.836 73 41 0 6 78 93 165 6.81e-13 63.2
MS.gene39787.t1 MTR_4g132070 40.136 147 84 3 1 146 385 528 1.13e-26 104
MS.gene39787.t1 MTR_1g047100 37.681 138 85 1 12 148 4 141 1.16e-26 97.8
MS.gene39787.t1 MTR_7g089760 44.286 140 76 1 11 148 4 143 1.28e-26 98.2
MS.gene39787.t1 MTR_7g075040 39.865 148 80 3 8 146 43 190 1.38e-26 99.0
MS.gene39787.t1 MTR_8g036075 39.865 148 81 3 7 146 44 191 3.81e-26 98.2
MS.gene39787.t1 MTR_8g095440 39.041 146 86 2 1 146 324 466 5.91e-26 102
MS.gene39787.t1 MTR_1g026190 37.838 148 86 3 1 146 376 519 6.40e-26 102
MS.gene39787.t1 MTR_1g096490 40.541 148 81 3 1 146 324 466 6.68e-26 102
MS.gene39787.t1 MTR_7g090450 41.135 141 78 3 11 146 72 212 9.52e-26 97.4
MS.gene39787.t1 MTR_4g107490 38.514 148 86 4 1 146 367 511 1.26e-25 101
MS.gene39787.t1 MTR_1g055255 38.356 146 87 2 1 146 418 560 1.52e-25 101
MS.gene39787.t1 MTR_3g098070 37.671 146 88 2 1 146 323 465 1.86e-25 100
MS.gene39787.t1 MTR_5g009830 39.189 148 84 3 1 146 360 503 2.75e-25 100
MS.gene39787.t1 MTR_4g115170 40.523 153 73 2 12 146 64 216 3.60e-25 96.3
MS.gene39787.t1 MTR_3g051770 38.816 152 86 2 1 146 377 527 5.23e-25 99.8
MS.gene39787.t1 MTR_3g098090 37.671 146 88 2 1 146 326 468 1.51e-24 98.2
MS.gene39787.t1 MTR_8g099095 37.838 148 86 3 1 146 360 503 5.28e-24 97.1
MS.gene39787.t1 MTR_5g099240 36.301 146 90 2 1 146 318 460 2.20e-23 95.1
MS.gene39787.t1 MTR_7g068710 36.301 146 92 1 1 146 350 494 2.40e-23 95.1
MS.gene39787.t1 MTR_1g054865 36.301 146 90 2 1 146 455 597 2.58e-23 95.1
MS.gene39787.t1 MTR_5g099240 36.301 146 90 2 1 146 390 532 2.59e-23 95.1
MS.gene39787.t1 MTR_1g041150 35.616 146 91 2 1 146 412 554 6.69e-23 94.0
MS.gene39787.t1 MTR_0028s0170 37.671 146 89 2 1 146 372 515 1.25e-22 93.2
MS.gene39787.t1 MTR_5g089320 36.735 147 89 3 1 146 362 505 6.45e-22 90.9
MS.gene39787.t1 MTR_2g098890 41.429 140 78 2 11 146 63 202 8.43e-22 87.0
MS.gene39787.t1 MTR_4g086260 35.766 137 86 1 10 146 55 189 1.67e-21 85.9
MS.gene39787.t1 MTR_4g103650 35.714 140 80 3 12 147 2 135 1.78e-21 84.3
MS.gene39787.t1 MTR_4g066660 35.374 147 92 3 1 147 366 509 2.25e-21 89.4
MS.gene39787.t1 MTR_4g132040 36.054 147 89 4 1 146 390 532 3.00e-21 89.0
MS.gene39787.t1 MTR_3g089070 32.374 139 83 2 13 146 7 139 3.17e-21 84.0
MS.gene39787.t1 MTR_7g106710 38.356 146 82 3 1 146 429 566 3.30e-21 89.0
MS.gene39787.t1 MTR_3g089090 32.374 139 83 2 13 146 6 138 3.63e-21 83.6
MS.gene39787.t1 MTR_3g055510 38.194 144 36 2 1 144 41 131 4.38e-21 83.6
MS.gene39787.t1 MTR_3g055480 64.815 54 19 0 93 146 53 106 1.33e-20 81.6
MS.gene39787.t1 MTR_3g055480 42.667 75 36 1 1 75 41 108 1.73e-13 63.2
MS.gene39787.t1 MTR_5g027000 32.847 137 92 0 6 142 16 152 1.36e-20 82.8
MS.gene39787.t1 MTR_1g052530 31.757 148 100 1 1 148 346 492 2.34e-20 86.7
MS.gene39787.t1 MTR_7g091890 31.757 148 100 1 1 148 352 498 5.76e-20 85.5
MS.gene39787.t1 MTR_4g103655 34.286 140 82 3 12 147 6 139 7.67e-20 80.1
MS.gene39787.t1 MTR_4g103630 34.286 140 82 3 12 147 6 139 8.63e-20 80.1
MS.gene39787.t1 MTR_5g017550 36.691 139 81 2 12 147 48 182 1.62e-19 80.5
MS.gene39787.t1 MTR_5g008705 31.250 128 88 0 19 146 1 128 1.71e-18 76.6
MS.gene39787.t1 MTR_6g023460 27.857 140 100 1 8 147 4 142 1.85e-18 76.6
MS.gene39787.t1 MTR_6g023460 37.313 67 42 0 7 73 75 141 6.68e-11 57.0
MS.gene39787.t1 MTR_8g078270 32.394 142 94 2 6 146 47 187 7.49e-18 76.3
MS.gene39787.t1 MTR_5g017510 35.000 140 83 3 12 147 48 183 1.19e-17 75.9
MS.gene39787.t1 MTR_5g017560 35.000 140 83 3 12 147 48 183 1.19e-17 75.9
MS.gene39787.t1 MTR_7g074240 32.192 146 87 2 13 146 25 170 4.24e-16 71.6
MS.gene39787.t1 MTR_5g008695 33.036 112 73 1 36 145 1 112 6.49e-15 67.0
MS.gene39787.t1 MTR_3g083470 48.529 68 35 0 6 73 150 217 9.57e-15 68.9
MS.gene39787.t1 MTR_3g083470 32.847 137 82 1 11 147 92 218 1.01e-13 66.2
MS.gene39787.t1 MTR_5g022030 27.632 152 98 4 1 146 395 540 1.26e-13 67.4
MS.gene39787.t1 MTR_5g089440 36.364 99 60 2 49 146 80 176 6.10e-12 60.8
MS.gene39787.t1 MTR_4g082050 44.595 74 41 0 73 146 65 138 7.02e-12 59.7
MS.gene39787.t1 MTR_7g084400 31.250 144 90 5 1 142 23 159 7.37e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene39787.t1 AT3G43810 99.324 148 1 0 1 148 1 148 5.64e-106 301
MS.gene39787.t1 AT3G43810 45.455 77 41 1 73 149 1 76 4.68e-13 64.3
MS.gene39787.t1 AT3G43810 99.329 149 1 0 1 149 1 149 8.78e-106 298
MS.gene39787.t1 AT2G27030 98.658 149 2 0 1 149 1 149 1.69e-105 298
MS.gene39787.t1 AT2G27030 46.269 67 36 0 12 78 85 151 5.81e-13 63.5
MS.gene39787.t1 AT5G21274 98.658 149 2 0 1 149 1 149 2.33e-105 297
MS.gene39787.t1 AT3G56800 98.658 149 2 0 1 149 1 149 3.31e-105 296
MS.gene39787.t1 AT2G27030 98.658 149 2 0 1 149 1 149 3.31e-105 296
MS.gene39787.t1 AT2G41110 98.658 149 2 0 1 149 1 149 3.31e-105 296
MS.gene39787.t1 AT5G37780 97.987 149 3 0 1 149 1 149 5.74e-105 296
MS.gene39787.t1 AT1G66410 97.987 149 3 0 1 149 1 149 5.74e-105 296
MS.gene39787.t1 AT1G66410 91.824 159 3 1 1 149 1 159 9.70e-102 288
MS.gene39787.t1 AT2G41110 91.304 161 2 1 1 149 1 161 2.73e-101 287
MS.gene39787.t1 AT5G37780 89.024 164 3 1 1 149 1 164 1.32e-100 286
MS.gene39787.t1 AT5G37780 83.429 175 3 1 1 149 1 175 7.01e-99 281
MS.gene39787.t1 AT5G37780 97.581 124 3 0 26 149 13 136 5.98e-86 248
MS.gene39787.t1 AT5G37780 47.692 65 34 0 12 76 72 136 2.42e-13 63.5
MS.gene39787.t1 AT3G22930 77.083 144 33 0 4 147 27 170 1.14e-80 236
MS.gene39787.t1 AT3G43810 100.000 113 0 0 37 149 1 113 9.74e-79 228
MS.gene39787.t1 AT3G43810 47.692 65 34 0 12 76 49 113 1.66e-13 63.2
MS.gene39787.t1 AT3G43810 100.000 113 0 0 37 149 1 113 9.74e-79 228
MS.gene39787.t1 AT3G43810 47.692 65 34 0 12 76 49 113 1.66e-13 63.2
MS.gene39787.t1 AT4G14640 74.126 143 37 0 5 147 6 148 1.93e-78 229
MS.gene39787.t1 AT1G66410 97.345 113 3 0 37 149 1 113 2.86e-77 225
MS.gene39787.t1 AT1G66410 47.692 65 34 0 12 76 49 113 5.57e-14 64.3
MS.gene39787.t1 AT1G66410 97.345 113 3 0 37 149 1 113 2.86e-77 225
MS.gene39787.t1 AT1G66410 47.692 65 34 0 12 76 49 113 5.57e-14 64.3
MS.gene39787.t1 AT4G14640 72.951 122 33 0 26 147 9 130 1.27e-65 196
MS.gene39787.t1 AT4G14640 46.774 62 33 0 12 73 68 129 4.25e-13 62.8
MS.gene39787.t1 AT2G41090 64.430 149 50 1 1 149 1 146 2.04e-61 187
MS.gene39787.t1 AT2G41100 56.627 166 55 2 1 149 55 220 4.62e-54 172
MS.gene39787.t1 AT2G41100 61.702 94 33 1 4 97 148 238 2.14e-30 111
MS.gene39787.t1 AT2G41100 45.669 127 53 2 36 146 1 127 1.23e-29 109
MS.gene39787.t1 AT2G41100 56.627 166 55 2 1 149 55 220 4.62e-54 172
MS.gene39787.t1 AT2G41100 61.702 94 33 1 4 97 148 238 2.14e-30 111
MS.gene39787.t1 AT2G41100 45.669 127 53 2 36 146 1 127 1.23e-29 109
MS.gene39787.t1 AT2G41100 56.627 166 55 2 1 149 55 220 4.62e-54 172
MS.gene39787.t1 AT2G41100 61.702 94 33 1 4 97 148 238 2.14e-30 111
MS.gene39787.t1 AT2G41100 45.669 127 53 2 36 146 1 127 1.23e-29 109
MS.gene39787.t1 AT2G41100 56.627 166 55 2 1 149 90 255 1.32e-53 172
MS.gene39787.t1 AT2G41100 51.235 162 63 2 1 146 1 162 1.51e-49 161
MS.gene39787.t1 AT2G41100 61.702 94 33 1 4 97 183 273 4.54e-30 111
MS.gene39787.t1 AT2G41100 56.627 166 55 2 1 149 90 255 1.32e-53 172
MS.gene39787.t1 AT2G41100 51.235 162 63 2 1 146 1 162 1.51e-49 161
MS.gene39787.t1 AT2G41100 61.702 94 33 1 4 97 183 273 4.54e-30 111
MS.gene39787.t1 AT4G14640 72.816 103 28 0 5 107 6 108 4.22e-53 164
MS.gene39787.t1 AT3G22930 74.757 103 26 0 4 106 27 129 9.56e-53 163
MS.gene39787.t1 AT3G22930 46.774 62 33 0 85 146 35 96 2.96e-11 57.8
MS.gene39787.t1 AT3G51920 51.351 148 72 0 1 148 1 148 5.80e-47 149
MS.gene39787.t1 AT1G12310 48.980 147 73 1 3 149 4 148 1.88e-46 148
MS.gene39787.t1 AT1G62820 48.299 147 74 1 3 149 4 148 3.50e-46 147
MS.gene39787.t1 AT1G32250 43.421 152 80 1 1 146 5 156 2.65e-41 135
MS.gene39787.t1 AT3G50360 47.183 142 75 0 5 146 20 161 3.31e-40 133
MS.gene39787.t1 AT3G50360 45.714 70 38 0 80 149 22 91 4.20e-13 63.5
MS.gene39787.t1 AT4G37010 43.662 142 80 0 5 146 20 161 5.65e-36 122
MS.gene39787.t1 AT4G37010 43.662 142 80 0 5 146 24 165 5.86e-36 122
MS.gene39787.t1 AT2G41100 53.077 130 44 2 37 149 1 130 3.43e-35 121
MS.gene39787.t1 AT2G41100 61.702 94 33 1 4 97 58 148 1.78e-31 112
MS.gene39787.t1 AT2G41100 60.825 97 35 1 1 97 1 94 2.41e-34 117
MS.gene39787.t1 AT2G41100 50.649 77 37 1 73 149 1 76 1.32e-17 74.7
MS.gene39787.t1 AT1G24620 46.763 139 73 1 9 147 34 171 1.82e-33 116
MS.gene39787.t1 AT1G18530 41.379 145 77 2 7 146 2 143 3.40e-33 115
MS.gene39787.t1 AT1G18530 42.647 68 39 0 12 79 82 149 1.60e-11 58.9
MS.gene39787.t1 AT3G03000 44.521 146 80 1 4 148 12 157 7.73e-33 114
MS.gene39787.t1 AT3G25600 40.397 151 82 2 1 146 1 148 4.93e-32 112
MS.gene39787.t1 AT3G25600 41.176 68 40 0 12 79 87 154 2.21e-11 58.9
MS.gene39787.t1 AT1G05990 44.604 139 74 2 11 146 4 142 4.32e-31 109
MS.gene39787.t1 AT1G18210 42.222 135 74 1 12 146 23 153 4.64e-31 110
MS.gene39787.t1 AT1G18210 42.222 135 74 1 12 146 23 153 4.64e-31 110
MS.gene39787.t1 AT1G66400 43.478 138 76 1 12 147 15 152 4.86e-31 109
MS.gene39787.t1 AT5G37770 42.446 139 76 1 12 146 17 155 7.47e-30 106
MS.gene39787.t1 AT5G37770 44.615 65 36 0 10 74 92 156 1.27e-13 64.7
MS.gene39787.t1 AT5G37770 42.446 139 76 1 12 146 17 155 7.47e-30 106
MS.gene39787.t1 AT5G37770 44.615 65 36 0 10 74 92 156 1.27e-13 64.7
MS.gene39787.t1 AT1G76040 41.781 146 83 2 1 146 167 310 1.27e-29 110
MS.gene39787.t1 AT1G76040 41.781 146 83 2 1 146 167 310 1.27e-29 110
MS.gene39787.t1 AT1G73630 40.146 137 78 1 12 148 20 152 1.88e-29 105
MS.gene39787.t1 AT4G03290 45.390 141 72 2 11 146 4 144 1.99e-29 105
MS.gene39787.t1 AT4G03290 46.875 64 32 1 14 75 83 146 1.83e-11 58.9
MS.gene39787.t1 AT2G43290 42.657 143 75 3 11 146 64 206 2.15e-29 107
MS.gene39787.t1 AT1G76040 41.781 146 83 2 1 146 405 548 1.75e-28 109
MS.gene39787.t1 AT3G59440 40.816 147 84 2 2 146 41 186 1.89e-27 101
MS.gene39787.t1 AT5G23580 40.411 146 84 2 1 146 316 458 5.71e-27 105
MS.gene39787.t1 AT2G15680 37.324 142 87 1 5 146 43 182 8.88e-27 99.4
MS.gene39787.t1 AT4G21940 40.268 149 85 3 1 148 395 540 2.23e-26 103
MS.gene39787.t1 AT4G21940 40.268 149 85 3 1 148 395 540 2.73e-26 103
MS.gene39787.t1 AT4G23650 39.189 148 84 3 1 146 372 515 1.21e-25 101
MS.gene39787.t1 AT4G23650 43.478 69 36 1 82 147 377 445 4.94e-11 59.7
MS.gene39787.t1 AT1G35670 38.356 146 87 2 1 146 320 462 1.38e-25 101
MS.gene39787.t1 AT4G09570 39.189 148 83 3 1 146 319 461 2.41e-25 100
MS.gene39787.t1 AT4G12860 40.580 138 80 1 11 146 4 141 2.88e-25 94.7
MS.gene39787.t1 AT4G04720 38.926 149 87 3 1 148 373 518 5.38e-25 99.8
MS.gene39787.t1 AT4G04720 38.926 149 87 3 1 148 373 518 5.38e-25 99.8
MS.gene39787.t1 AT4G38230 37.671 146 88 2 1 146 174 316 6.07e-25 97.8
MS.gene39787.t1 AT3G07490 41.304 138 79 1 11 146 4 141 6.73e-25 93.6
MS.gene39787.t1 AT3G10660 36.986 146 89 2 1 146 480 622 7.08e-25 99.8
MS.gene39787.t1 AT3G10660 36.986 146 89 2 1 146 480 622 7.08e-25 99.8
MS.gene39787.t1 AT5G19360 40.816 147 83 3 1 146 362 505 8.27e-25 99.4
MS.gene39787.t1 AT4G38230 37.671 146 88 2 1 146 348 490 1.62e-24 98.2
MS.gene39787.t1 AT4G38230 37.671 146 88 2 1 146 318 460 1.77e-24 98.2
MS.gene39787.t1 AT4G38230 37.671 146 88 2 1 146 318 460 1.77e-24 98.2
MS.gene39787.t1 AT1G61950 39.189 148 84 3 1 146 393 536 1.94e-24 98.2
MS.gene39787.t1 AT5G12180 40.136 147 84 3 1 146 367 510 3.70e-24 97.4
MS.gene39787.t1 AT3G10190 40.146 137 79 3 12 146 70 205 6.92e-24 92.4
MS.gene39787.t1 AT5G04870 36.301 146 90 2 1 146 444 586 7.11e-24 96.7
MS.gene39787.t1 AT1G74740 35.570 149 93 3 1 148 353 499 1.86e-23 95.5
MS.gene39787.t1 AT3G20410 36.986 146 90 2 1 146 385 528 2.80e-23 95.1
MS.gene39787.t1 AT3G20410 36.986 146 90 2 1 146 385 528 2.80e-23 95.1
MS.gene39787.t1 AT2G17290 36.301 146 90 2 1 146 379 521 4.68e-23 94.4
MS.gene39787.t1 AT2G17290 36.301 146 90 2 1 146 379 521 4.68e-23 94.4
MS.gene39787.t1 AT2G38910 35.616 146 91 2 1 146 428 570 1.19e-22 93.2
MS.gene39787.t1 AT4G04695 36.913 149 90 3 1 148 325 470 1.27e-22 92.8
MS.gene39787.t1 AT4G35310 35.616 146 91 2 1 146 391 533 1.36e-22 93.2
MS.gene39787.t1 AT4G35310 35.616 146 91 2 1 146 391 533 1.36e-22 93.2
MS.gene39787.t1 AT4G04740 37.671 146 87 3 2 146 363 505 1.54e-22 92.8
MS.gene39787.t1 AT4G04740 37.671 146 87 3 2 146 363 505 1.54e-22 92.8
MS.gene39787.t1 AT4G04740 37.671 146 87 3 2 146 363 505 1.54e-22 92.8
MS.gene39787.t1 AT4G04740 37.671 146 87 3 2 146 363 505 1.54e-22 92.8
MS.gene39787.t1 AT4G04740 37.671 146 87 3 2 146 363 505 1.54e-22 92.8
MS.gene39787.t1 AT4G04740 37.671 146 87 3 2 146 363 505 1.54e-22 92.8
MS.gene39787.t1 AT3G50770 36.429 140 84 2 12 146 64 203 1.87e-22 89.0
MS.gene39787.t1 AT3G50770 44.118 68 38 0 82 149 61 128 7.22e-13 63.5
MS.gene39787.t1 AT1G50700 35.616 146 92 2 1 146 367 510 2.17e-22 92.4
MS.gene39787.t1 AT4G04700 38.776 147 86 3 1 146 325 468 5.06e-22 91.3
MS.gene39787.t1 AT5G17470 37.500 136 82 2 15 148 5 139 5.20e-22 86.3
MS.gene39787.t1 AT5G17470 47.541 61 32 0 14 74 79 139 2.75e-12 60.8
MS.gene39787.t1 AT5G42380 36.232 138 87 1 10 146 47 184 1.88e-21 85.5
MS.gene39787.t1 AT1G18890 37.333 150 89 4 1 148 357 503 2.16e-21 89.7
MS.gene39787.t1 AT3G57530 36.054 147 90 3 1 146 357 500 3.10e-21 89.0
MS.gene39787.t1 AT5G12480 34.899 149 95 2 1 148 259 406 3.82e-21 88.6
MS.gene39787.t1 AT5G12480 34.899 149 95 2 1 148 353 500 5.02e-21 88.6
MS.gene39787.t1 AT2G36180 41.176 136 76 3 15 147 3 137 1.28e-20 82.4
MS.gene39787.t1 AT3G03400 36.434 129 80 1 13 139 6 134 2.38e-20 81.6
MS.gene39787.t1 AT3G51850 33.562 146 96 1 1 146 348 492 3.01e-20 86.3
MS.gene39787.t1 AT3G03410 35.556 135 78 1 14 148 4 129 9.15e-20 79.7
MS.gene39787.t1 AT5G19450 32.886 149 98 2 1 148 351 498 2.93e-19 83.6
MS.gene39787.t1 AT5G19450 32.886 149 98 2 1 148 351 498 2.93e-19 83.6
MS.gene39787.t1 AT2G41410 34.752 141 89 3 11 148 69 209 3.38e-19 80.5
MS.gene39787.t1 AT4G04710 35.374 147 91 3 1 146 326 469 3.51e-19 83.2
MS.gene39787.t1 AT4G04710 35.374 147 91 3 1 146 312 455 3.66e-19 83.2
MS.gene39787.t1 AT4G04710 35.374 147 91 3 1 146 339 482 3.94e-19 83.2
MS.gene39787.t1 AT2G41860 32.192 146 98 1 1 146 348 492 1.98e-18 81.3
MS.gene39787.t1 AT2G41860 32.192 146 98 1 1 146 348 492 2.00e-18 81.3
MS.gene39787.t1 AT4G04710 35.570 149 90 4 1 146 339 484 5.71e-18 79.7
MS.gene39787.t1 AT1G50700 30.814 172 91 3 1 146 367 536 6.20e-18 79.7
MS.gene39787.t1 AT2G31500 32.667 150 96 4 1 147 360 507 2.11e-17 78.2
MS.gene39787.t1 AT4G20780 33.775 151 78 3 17 146 34 183 1.19e-16 73.2
MS.gene39787.t1 AT4G04740 35.606 132 81 3 2 132 363 491 1.72e-16 75.5
MS.gene39787.t1 AT5G44460 33.566 143 83 2 16 146 32 174 3.08e-15 69.3
MS.gene39787.t1 AT1G76040 37.624 101 62 1 1 101 405 504 4.66e-15 71.2
MS.gene39787.t1 AT4G21940 38.384 99 60 1 1 99 395 492 7.57e-15 70.9
MS.gene39787.t1 AT3G51850 34.906 106 68 1 1 106 348 452 1.68e-14 69.7
MS.gene39787.t1 AT2G17890 28.289 152 97 5 1 146 404 549 1.83e-14 69.7
MS.gene39787.t1 AT5G66210 27.632 152 98 4 1 146 358 503 3.00e-14 68.9
MS.gene39787.t1 AT5G66210 27.632 152 98 4 1 146 358 503 3.00e-14 68.9
MS.gene39787.t1 AT1G76640 29.932 147 97 2 4 146 14 158 4.09e-14 65.9
MS.gene39787.t1 AT1G76650 32.609 138 86 2 12 146 43 176 7.17e-14 65.9
MS.gene39787.t1 AT1G76650 32.609 138 86 2 12 146 43 176 7.17e-14 65.9
MS.gene39787.t1 AT5G49480 28.758 153 101 3 1 146 7 158 3.70e-13 63.5
MS.gene39787.t1 AT1G50700 36.364 99 62 1 1 99 367 464 5.11e-13 65.5
MS.gene39787.t1 AT1G21550 30.719 153 82 4 11 147 9 153 1.12e-12 62.0
MS.gene39787.t1 AT5G66210 26.718 131 90 3 1 125 358 488 1.85e-11 61.2
MS.gene39787.t1 AT1G76650 31.884 138 77 3 12 146 43 166 3.18e-11 58.5

Find 46 sgRNAs with CRISPR-Local

Find 122 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGAGCAGATCTCTGAGTTTA+AGG 0.180468 5.4:-69456208 MS.gene39787:CDS
GCCATCAGGTTAAGGAATTC+AGG 0.271939 5.4:+69453865 None:intergenic
ATTCAGCCTCAGTTGGGTTC+TGG 0.282126 5.4:+69453941 None:intergenic
CCCAACTGAGGCTGAATTGC+AGG 0.330056 5.4:-69453935 MS.gene39787:CDS
GTGTTTGACAAGGATCAAAA+TGG 0.341319 5.4:-69453790 MS.gene39787:CDS
CCTTCATCTTGCGGGCCATC+AGG 0.361788 5.4:+69453851 None:intergenic
ATCAGTATCCTTCATCTTGC+GGG 0.362125 5.4:+69453843 None:intergenic
CATCGCCATCCTTATCGAAT+AGG 0.413564 5.4:+69456175 None:intergenic
TCTTGCGGGCCATCAGGTTA+AGG 0.421012 5.4:+69453857 None:intergenic
TCCTGCAATTCAGCCTCAGT+TGG 0.439040 5.4:+69453934 None:intergenic
CCCTGAATTCCTTAACCTGA+TGG 0.451258 5.4:-69453866 MS.gene39787:CDS
AGCTTTCAGCCTATTCGATA+AGG 0.462509 5.4:-69456184 MS.gene39787:CDS
CCTGCAATTCAGCCTCAGTT+GGG 0.478310 5.4:+69453935 None:intergenic
AGCTTCCTTGAGCTCTTCCT+CGG 0.488636 5.4:+69453819 None:intergenic
ATTCGCGAGGCTGATGTTGA+TGG 0.500826 5.4:-69453688 MS.gene39787:CDS
CGTCATGTCATGACAAATCT+CGG 0.504845 5.4:-69453745 MS.gene39787:CDS
CCTGATGGCCCGCAAGATGA+AGG 0.511279 5.4:-69453851 MS.gene39787:CDS
CCATCAGGTTAAGGAATTCA+GGG 0.519282 5.4:+69453866 None:intergenic
AATCAGTATCCTTCATCTTG+CGG 0.519720 5.4:+69453842 None:intergenic
GAGGCTGATGTTGATGGTGA+TGG 0.534263 5.4:-69453682 MS.gene39787:CDS
GAGGTTGATGCTGATGGAAA+CGG 0.536879 5.4:-69453901 MS.gene39787:CDS
CATCACAGTCCCGAGCTCCT+TGG 0.540354 5.4:+69453975 None:intergenic
GTATTACTACCAAGGAGCTC+GGG 0.541622 5.4:-69453984 MS.gene39787:CDS
AGCTTTCCGTGTGTTTGACA+AGG 0.552785 5.4:-69453800 MS.gene39787:CDS
ATCAACGAGGTTGATGCTGA+TGG 0.559241 5.4:-69453907 MS.gene39787:CDS
GGGACTGTGATGAGGTCGCT+AGG 0.561210 5.4:-69453964 MS.gene39787:CDS
TCGGTGAGTTGATCGGCCAT+TGG 0.562102 5.4:+69456231 None:intergenic
TGTATTACTACCAAGGAGCT+CGG 0.565857 5.4:-69453985 MS.gene39787:CDS
CTGCTCGTCGGTGAGTTGAT+CGG 0.574149 5.4:+69456224 None:intergenic
AAGGAATTCAGGGAAATCAA+TGG 0.581358 5.4:+69453876 None:intergenic
AAGTCATGATGGCTAAGTGA+AGG 0.584665 5.4:-69453633 None:intergenic
AGGCTGATGTTGATGGTGAT+GGG 0.588891 5.4:-69453681 MS.gene39787:CDS
TTCAGCCTATTCGATAAGGA+TGG 0.591776 5.4:-69456180 MS.gene39787:CDS
TGATTCCGAGGAAGAGCTCA+AGG 0.592058 5.4:-69453824 MS.gene39787:CDS
GGAGTTTGTCAAAGTCATGA+TGG 0.601225 5.4:-69453644 MS.gene39787:CDS
GATGAAGGATACTGATTCCG+AGG 0.608389 5.4:-69453836 MS.gene39787:CDS
TGATGGGCAGATCAACTATG+AGG 0.622339 5.4:-69453665 MS.gene39787:CDS
CGAGATTTGTCATGACATGA+CGG 0.630044 5.4:+69453746 None:intergenic
CTATTCGATAAGGATGGCGA+TGG 0.634576 5.4:-69456174 MS.gene39787:intron
AGGAGCTCGGGACTGTGATG+AGG 0.639412 5.4:-69453972 MS.gene39787:CDS
TTTGATCCTTGTCAAACACA+CGG 0.647181 5.4:+69453794 None:intergenic
TGCAGGTTGTATTACTACCA+AGG 0.662670 5.4:-69453992 MS.gene39787:intron
AAACTCAGAGATCTGCTCGT+CGG 0.668704 5.4:+69456212 None:intergenic
GCTAGGCCAGAACCCAACTG+AGG 0.683758 5.4:-69453947 MS.gene39787:CDS
AGTTGACGAGATGATTCGCG+AGG 0.696963 5.4:-69453701 MS.gene39787:CDS
ATTGCAGGACATGATCAACG+AGG 0.813894 5.4:-69453920 MS.gene39787:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAGCAAAAAAAATAAA+AGG + chr5.4:69453733-69453752 None:intergenic 10.0%
!! GAAAAAAAATTCATAAAAAT+TGG - chr5.4:69455124-69455143 MS.gene39787:intron 10.0%
!! AATAACTCAATAATCAATAT+GGG - chr5.4:69455360-69455379 MS.gene39787:intron 15.0%
!! TTGATATAACATGTAATATT+AGG - chr5.4:69455586-69455605 MS.gene39787:intron 15.0%
!!! AATTTTTTTTCAAAAGTATG+AGG + chr5.4:69455115-69455134 None:intergenic 15.0%
!!! ATATAAAAGGATTGTTTTTT+TGG - chr5.4:69454085-69454104 MS.gene39787:intron 15.0%
!!! TGTTGTTTGATTTATATAAA+AGG - chr5.4:69454072-69454091 MS.gene39787:intron 15.0%
!! GAATAACTCAATAATCAATA+TGG - chr5.4:69455359-69455378 MS.gene39787:intron 20.0%
!! GTTATAATTCTGTTTATTGA+AGG - chr5.4:69455003-69455022 MS.gene39787:intron 20.0%
!! TATAATACTATTAGCTACAT+CGG + chr5.4:69454510-69454529 None:intergenic 20.0%
!! TTATCAAAATTCCTTCAAAA+GGG + chr5.4:69453820-69453839 None:intergenic 20.0%
!! TTTATCAAAATTCCTTCAAA+AGG + chr5.4:69453821-69453840 None:intergenic 20.0%
!!! ACTTCTTTAGATTTGTTTTT+AGG - chr5.4:69453848-69453867 MS.gene39787:CDS 20.0%
!!! ATAAAAATTGGAACTTGTTT+AGG - chr5.4:69455136-69455155 MS.gene39787:intron 20.0%
!!! CTTCTTTAGATTTGTTTTTA+GGG - chr5.4:69453849-69453868 MS.gene39787:CDS 20.0%
!!! GCAAGTTTTAATGTTTTTTT+TGG - chr5.4:69454364-69454383 MS.gene39787:intron 20.0%
! AATACACATCAACAATGATA+CGG + chr5.4:69454568-69454587 None:intergenic 25.0%
! AGCGGTTTATTAAAAGTTTA+TGG - chr5.4:69454955-69454974 MS.gene39787:intron 25.0%
! ATGAAAAACATCAAAACTCA+CGG + chr5.4:69455647-69455666 None:intergenic 25.0%
! GTAGCATAGAAAAATTTGAA+CGG + chr5.4:69454771-69454790 None:intergenic 25.0%
! GTTATCAATTGCAAAAATAG+CGG - chr5.4:69454744-69454763 MS.gene39787:intron 25.0%
! TAATTCTGTTTATTGAAGGA+CGG - chr5.4:69455007-69455026 MS.gene39787:intron 25.0%
! TAGCATAGAAAAATTTGAAC+GGG + chr5.4:69454770-69454789 None:intergenic 25.0%
! TATCATTGTTGATGTGTATT+TGG - chr5.4:69454568-69454587 MS.gene39787:intron 25.0%
! TTTGTCATGTATGTCTTATA+GGG - chr5.4:69455808-69455827 MS.gene39787:intron 25.0%
!! ATCTTATTGATTACTGTTGT+AGG - chr5.4:69455542-69455561 MS.gene39787:intron 25.0%
!! TAGATGGTAACTATTTGTTA+TGG - chr5.4:69455467-69455486 MS.gene39787:intron 25.0%
!! TTTTGTCATGTATGTCTTAT+AGG - chr5.4:69455807-69455826 MS.gene39787:intron 25.0%
!!! ATGAATTTTAGTTGCATGTT+TGG - chr5.4:69454110-69454129 MS.gene39787:intron 25.0%
!!! GATGGTTTGTTTGATTTTTT+AGG - chr5.4:69454008-69454027 MS.gene39787:intron 25.0%
AATAGTTACCATCTAATAGC+TGG + chr5.4:69455462-69455481 None:intergenic 30.0%
TGAAAAACATCAAAACTCAC+GGG + chr5.4:69455646-69455665 None:intergenic 30.0%
TGATTGTGAATGACTCAATA+TGG - chr5.4:69454138-69454157 MS.gene39787:intron 30.0%
TTCTCAATTGCGAAAAATAG+CGG - chr5.4:69455714-69455733 MS.gene39787:intron 30.0%
! AATTGGAACTTGTTTAGGTT+TGG - chr5.4:69455141-69455160 MS.gene39787:intron 30.0%
! CAAATTTTTCTATGCTACAG+TGG - chr5.4:69454773-69454792 MS.gene39787:intron 30.0%
! GAAAACTATGTTTTCAGTTG+CGG - chr5.4:69454431-69454450 MS.gene39787:intron 30.0%
!! CTGTGAGTTTTGATGTTTTT+CGG - chr5.4:69454670-69454689 MS.gene39787:intron 30.0%
!! TATCAGTGTTGATCTGTATT+TGG - chr5.4:69454282-69454301 MS.gene39787:intron 30.0%
!! TCACTTGTTAAGGTTTTAAC+TGG - chr5.4:69455836-69455855 MS.gene39787:intron 30.0%
AAAACTCACAGTTGCATGAT+AGG + chr5.4:69454661-69454680 None:intergenic 35.0%
AAGGAATTCAGGGAAATCAA+TGG + chr5.4:69455991-69456010 None:intergenic 35.0%
AATCAGTATCCTTCATCTTG+CGG + chr5.4:69456025-69456044 None:intergenic 35.0%
AATCCAAACACGTAACACTA+AGG + chr5.4:69455336-69455355 None:intergenic 35.0%
ACTGTTGTAGGTGTGTATTT+GGG - chr5.4:69455554-69455573 MS.gene39787:intron 35.0%
AGAATGAACCAGCTATTAGA+TGG - chr5.4:69455451-69455470 MS.gene39787:intron 35.0%
AGCACGTGTGAATTTGAAAA+AGG + chr5.4:69454466-69454485 None:intergenic 35.0%
ATACGCGATTTAGTAGAATG+CGG - chr5.4:69454920-69454939 MS.gene39787:intron 35.0%
ATCCAAACACGTAACACTAA+GGG + chr5.4:69455335-69455354 None:intergenic 35.0%
GTGTTTGACAAGGATCAAAA+TGG - chr5.4:69456074-69456093 MS.gene39787:intron 35.0%
TACTGTTGTAGGTGTGTATT+TGG - chr5.4:69455553-69455572 MS.gene39787:intron 35.0%
TTAATCAGATTAGCACGAAC+AGG + chr5.4:69455244-69455263 None:intergenic 35.0%
TTATGTCATGTGTTTGTGTG+CGG - chr5.4:69453986-69454005 MS.gene39787:CDS 35.0%
TTGTCAACTATTAGCTAGAG+TGG + chr5.4:69454814-69454833 None:intergenic 35.0%
TTTGATCCTTGTCAAACACA+CGG + chr5.4:69456073-69456092 None:intergenic 35.0%
! ATGTTTTCAGTTGCGGAAAA+TGG - chr5.4:69454438-69454457 MS.gene39787:intron 35.0%
!! ACCTGATTGCTATTTCATTC+TGG + chr5.4:69454189-69454208 None:intergenic 35.0%
!! AGGGTTCTTGTTTGACTTTT+TGG - chr5.4:69453868-69453887 MS.gene39787:CDS 35.0%
!! ATGCGGCTTTTTAAAAACAG+CGG - chr5.4:69454937-69454956 MS.gene39787:intron 35.0%
!! ATTCCTTCAAAAGGGTATCA+TGG + chr5.4:69453812-69453831 None:intergenic 35.0%
!! TTCCTTCAAAAGGGTATCAT+GGG + chr5.4:69453811-69453830 None:intergenic 35.0%
!!! GCATTTTGGTCACTTTTTTG+TGG - chr5.4:69455416-69455435 MS.gene39787:intron 35.0%
AGACAGCTTGATACGAGATT+TGG + chr5.4:69454847-69454866 None:intergenic 40.0%
AGCTTTCAGCCTATTCGATA+AGG - chr5.4:69453680-69453699 MS.gene39787:CDS 40.0%
ATCAGTATCCTTCATCTTGC+GGG + chr5.4:69456024-69456043 None:intergenic 40.0%
ATTAGCTACATCGGCACTAA+AGG + chr5.4:69454501-69454520 None:intergenic 40.0%
CCATCAGGTTAAGGAATTCA+GGG + chr5.4:69456001-69456020 None:intergenic 40.0%
CGAGATTTGTCATGACATGA+CGG + chr5.4:69456121-69456140 None:intergenic 40.0%
CGTCATGTCATGACAAATCT+CGG - chr5.4:69456119-69456138 MS.gene39787:intron 40.0%
GCCAGAATGAAATAGCAATC+AGG - chr5.4:69454185-69454204 MS.gene39787:intron 40.0%
GGAGTTTGTCAAAGTCATGA+TGG - chr5.4:69456220-69456239 MS.gene39787:CDS 40.0%
TAGCAATCAGGTGTTTGTGA+TGG - chr5.4:69454197-69454216 MS.gene39787:intron 40.0%
TGCAGGTTGTATTACTACCA+AGG - chr5.4:69455872-69455891 MS.gene39787:intron 40.0%
TGTATTACTACCAAGGAGCT+CGG - chr5.4:69455879-69455898 MS.gene39787:intron 40.0%
TTCAGCCTATTCGATAAGGA+TGG - chr5.4:69453684-69453703 MS.gene39787:CDS 40.0%
! AACCCATGATACCCTTTTGA+AGG - chr5.4:69453806-69453825 MS.gene39787:CDS 40.0%
! TAGGGCTGAATCACTTGTTA+AGG - chr5.4:69455826-69455845 MS.gene39787:intron 40.0%
!! GGCTTGTTAAAATGCTGTCT+TGG - chr5.4:69454879-69454898 MS.gene39787:intron 40.0%
!! TGTTGTGCTGTTGTGCATTT+TGG - chr5.4:69455402-69455421 MS.gene39787:intron 40.0%
AAACACGTAACACTAAGGGC+AGG + chr5.4:69455331-69455350 None:intergenic 45.0%
AAACTCAGAGATCTGCTCGT+CGG + chr5.4:69453655-69453674 None:intergenic 45.0%
AAGCTGTCTTGCAACAACAG+CGG - chr5.4:69454858-69454877 MS.gene39787:intron 45.0%
ACAGCACAACACAGACATGA+AGG + chr5.4:69455393-69455412 None:intergenic 45.0%
AGCACAACACAGACATGAAG+GGG + chr5.4:69455391-69455410 None:intergenic 45.0%
AGCTTTCCGTGTGTTTGACA+AGG - chr5.4:69456064-69456083 MS.gene39787:intron 45.0%
ATTGCAGGACATGATCAACG+AGG - chr5.4:69455944-69455963 MS.gene39787:intron 45.0%
CAGATTAGCACGAACAGGAA+AGG + chr5.4:69455239-69455258 None:intergenic 45.0%
CAGCACAACACAGACATGAA+GGG + chr5.4:69455392-69455411 None:intergenic 45.0%
CATCGCCATCCTTATCGAAT+AGG + chr5.4:69453692-69453711 None:intergenic 45.0%
CCCTGAATTCCTTAACCTGA+TGG - chr5.4:69455998-69456017 MS.gene39787:intron 45.0%
CGAGCAGATCTCTGAGTTTA+AGG - chr5.4:69453656-69453675 MS.gene39787:CDS 45.0%
CTATTCGATAAGGATGGCGA+TGG - chr5.4:69453690-69453709 MS.gene39787:CDS 45.0%
GCCATCAGGTTAAGGAATTC+AGG + chr5.4:69456002-69456021 None:intergenic 45.0%
GTATTACTACCAAGGAGCTC+GGG - chr5.4:69455880-69455899 MS.gene39787:intron 45.0%
GTCATGTGTACATTCCTGTC+AGG - chr5.4:69455618-69455637 MS.gene39787:intron 45.0%
TGCCCTTAGTGTTACGTGTT+TGG - chr5.4:69455330-69455349 MS.gene39787:intron 45.0%
TGTTTATTGAAGGACGGCGA+CGG - chr5.4:69455013-69455032 MS.gene39787:intron 45.0%
! TGATGGGCAGATCAACTATG+AGG - chr5.4:69456199-69456218 MS.gene39787:CDS 45.0%
!! AGGCTGATGTTGATGGTGAT+GGG - chr5.4:69456183-69456202 MS.gene39787:CDS 45.0%
!! ATCAACGAGGTTGATGCTGA+TGG - chr5.4:69455957-69455976 MS.gene39787:intron 45.0%
!! GAGGTTGATGCTGATGGAAA+CGG - chr5.4:69455963-69455982 MS.gene39787:intron 45.0%
!! GATGAAGGATACTGATTCCG+AGG - chr5.4:69456028-69456047 MS.gene39787:intron 45.0%
AGCTTCCTTGAGCTCTTCCT+CGG + chr5.4:69456048-69456067 None:intergenic 50.0%
AGTTGACGAGATGATTCGCG+AGG - chr5.4:69456163-69456182 MS.gene39787:intron 50.0%
ATTCAGCCTCAGTTGGGTTC+TGG + chr5.4:69455926-69455945 None:intergenic 50.0%
ATTCGCGAGGCTGATGTTGA+TGG - chr5.4:69456176-69456195 MS.gene39787:CDS 50.0%
CCTGCAATTCAGCCTCAGTT+GGG + chr5.4:69455932-69455951 None:intergenic 50.0%
CTGGTTGCTCAAAATGCTGC+AGG - chr5.4:69455855-69455874 MS.gene39787:intron 50.0%
GTCATGTGTTTGTGTGCGGA+TGG - chr5.4:69453990-69454009 MS.gene39787:CDS 50.0%
TCCTGCAATTCAGCCTCAGT+TGG + chr5.4:69455933-69455952 None:intergenic 50.0%
TGATTCCGAGGAAGAGCTCA+AGG - chr5.4:69456040-69456059 MS.gene39787:intron 50.0%
!! GAGGCTGATGTTGATGGTGA+TGG - chr5.4:69456182-69456201 MS.gene39787:CDS 50.0%
AAAACTCACGGGAGCCTGAC+AGG + chr5.4:69455635-69455654 None:intergenic 55.0%
CCCAACTGAGGCTGAATTGC+AGG - chr5.4:69455929-69455948 MS.gene39787:intron 55.0%
TCTTGCGGGCCATCAGGTTA+AGG + chr5.4:69456010-69456029 None:intergenic 55.0%
!! CTGCTCGTCGGTGAGTTGAT+CGG + chr5.4:69453643-69453662 None:intergenic 55.0%
AGGAGCTCGGGACTGTGATG+AGG - chr5.4:69455892-69455911 MS.gene39787:intron 60.0%
CATCACAGTCCCGAGCTCCT+TGG + chr5.4:69455892-69455911 None:intergenic 60.0%
CCTGATGGCCCGCAAGATGA+AGG - chr5.4:69456013-69456032 MS.gene39787:intron 60.0%
CCTTCATCTTGCGGGCCATC+AGG + chr5.4:69456016-69456035 None:intergenic 60.0%
GCTAGGCCAGAACCCAACTG+AGG - chr5.4:69455917-69455936 MS.gene39787:intron 60.0%
GGGACTGTGATGAGGTCGCT+AGG - chr5.4:69455900-69455919 MS.gene39787:intron 60.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 69453636 69456250 69453636 ID=MS.gene39787
chr5.4 mRNA 69453636 69456250 69453636 ID=MS.gene39787.t1;Parent=MS.gene39787
chr5.4 exon 69456175 69456250 69456175 ID=MS.gene39787.t1.exon1;Parent=MS.gene39787.t1
chr5.4 CDS 69456175 69456250 69456175 ID=cds.MS.gene39787.t1;Parent=MS.gene39787.t1
chr5.4 exon 69453636 69454009 69453636 ID=MS.gene39787.t1.exon2;Parent=MS.gene39787.t1
chr5.4 CDS 69453636 69454009 69453636 ID=cds.MS.gene39787.t1;Parent=MS.gene39787.t1
Gene Sequence

>MS.gene39787

ATGGCCGATCAACTCACCGACGAGCAGATCTCTGAGTTTAAGGAAGCTTTCAGCCTATTCGATAAGGATGGCGATGGTATCGTTTTTCTCAGATCCTTTTATTTTTTTTGCTTTTTTTCTTAGATCTAAATTTTTATTGAAGTGTTGTTGTTTTTCTCGATTTTGTTCACAACCCATGATACCCTTTTGAAGGAATTTTGATAAAAATTGACACTTCTTTAGATTTGTTTTTAGGGTTCTTGTTTGACTTTTTGGTTTGATTTTTGTTTTTATTCATGTTTATGATGAAATTTGTTTCATTTCACGTTTTACTCTTGTCTGATCAATGTTTTATGCGATCTATTATGTTGTTATGTCATGTGTTTGTGTGCGGATGGTTTGTTTGATTTTTTAGGAATGAGTATTTGCAATTGTGACTTGAGATTTGATTTGTTTTTGTTGTTTGATTTATATAAAAGGATTGTTTTTTTGGAGATGAATTTTAGTTGCATGTTTGGATTTGTGATTGTGAATGACTCAATATGGAATTTCTGATTGTGAAAGATCTATGCCAGAATGAAATAGCAATCAGGTGTTTGTGATGGCATTTTGCTTTTATATTTTTAGTATTGAATTAAATGATTTGTGTTTCTCTGATCTTATTGATTATCAGTGTTGATCTGTATTTGGATATAATTTAATTGATAAGCTAACATGTTTATGACTCATTACATTCGAGTCAAGCTCTCGCAAGTTTTAATGTTTTTTTTGGAAACTTTTGTTTTGATCGCAAAAATAGAATGTATAGTTTGAGAAGAAAACTATGTTTTCAGTTGCGGAAAATGGCGCCTTTTTCAAATTCACACGTGCTACAGTAGCACTGCCTTTAGTGCCGATGTAGCTAATAGTATTATATGAAAAGCTTTGTATTTTTCTGATCTTATTGATTACCGTATCATTGTTGATGTGTATTTGGTTAAAATGTATTGATAAGTTAACATCTAATATTATGTTTATGTTTATCTCTCTTTCATGTGTACATTCCTATCATGCAACTGTGAGTTTTGATGTTTTTCGGAAACTTTTGCTTTGATCGAAAATAGAAAGTATAGTTTGAGAAGAAAACTATGTTATCAATTGCAAAAATAGCGGCCCGTTCAAATTTTTCTATGCTACAGTGGCGCTGCTATTTTACACCACTCTAGCTAATAGTTGACAACATTTTTATACCAAATCTCGTATCAAGCTGTCTTGCAACAACAGCGGCTTGTTAAAATGCTGTCTTGGAACAACATTAATATTTTGATACGCGATTTAGTAGAATGCGGCTTTTTAAAAACAGCGGTTTATTAAAAGTTTATGGAAGTGTTATTATGTTTCTCAATTTTGTTATAATTCTGTTTATTGAAGGACGGCGACGGCATCATTTTTTTTAATTTTTTTTCTTAGATCTGATTTTTTATTTAAGTGTTGTTATGTTTCTCGATTTTGTTCATACCTCATACTTTTGAAAAAAAATTCATAAAAATTGGAACTTGTTTAGGTTTGGTTTTAGAGTTCTTTCTCATTTGACTTTTTGAGTTTAGTTTTTGTTTTCATTCACATTTATTGAAATTTGTTTCCTTTCCTGTTCGTGCTAATCTGATTAAAAGCAGATTTTTAGAGTTGATTTAGAAAATAGAATTTAAAAACTAAAAACAAAACTCATTCAAACCTGCCCTTAGTGTTACGTGTTTGGATTTTTGAATAACTCAATAATCAATATGGGATTTACCCCTTCATGTCTGTGTTGTGCTGTTGTGCATTTTGGTCACTTTTTTGTGGAAGATCTCTTTGAGAATGAACCAGCTATTAGATGGTAACTATTTGTTATGGCATTTTGCTTCTTACATTTTTAGTATTCAATTAAATGCTTTGTGTTTCTCTGATCTTATTGATTACTGTTGTAGGTGTGTATTTGGGTATAATTTATTGATATAACATGTAATATTAGGTTTATCTCTGTCATGTGTACATTCCTGTCAGGCTCCCGTGAGTTTTGATGTTTTTCATAAATTTTTGCTTTGATTGAAAATAGATAGTTTGAGAAGAAAACTATGTTCTCAATTGCGAAAAATAGCGGTTTTTTAAAATTTTGCTATGCTACAGTAGCAACATTTTGATCTAAAGTATAAGTTCACTGACTTAGAAACTTTTGTCATGTATGTCTTATAGGGCTGAATCACTTGTTAAGGTTTTAACTGGTTGCTCAAAATGCTGCAGGTTGTATTACTACCAAGGAGCTCGGGACTGTGATGAGGTCGCTAGGCCAGAACCCAACTGAGGCTGAATTGCAGGACATGATCAACGAGGTTGATGCTGATGGAAACGGTACCATTGATTTCCCTGAATTCCTTAACCTGATGGCCCGCAAGATGAAGGATACTGATTCCGAGGAAGAGCTCAAGGAAGCTTTCCGTGTGTTTGACAAGGATCAAAATGGTTTCATCTCTGCAGCTGAGCTCCGTCATGTCATGACAAATCTCGGAGAGAAGCTGACTGATGAAGAAGTTGACGAGATGATTCGCGAGGCTGATGTTGATGGTGATGGGCAGATCAACTATGAGGAGTTTGTCAAAGTCATGATGGCTAAGTGA
Protein sequence

>MS.gene39787.t1

MADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK