AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene39848

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene39848.t1 MTR_5g087390 89.665 1374 124 2 3 1376 1 1356 0.0 2555
MS.gene39848.t1 MTR_5g087410 78.270 1376 287 9 3 1373 1 1369 0.0 2161
MS.gene39848.t1 MTR_5g087410 77.262 1249 273 8 3 1247 1 1242 0.0 1928
MS.gene39848.t1 MTR_2g098030 31.202 1423 815 39 3 1349 1 1335 1.39e-171 549
MS.gene39848.t1 MTR_2g098030 31.281 1413 808 38 12 1349 15 1339 1.98e-171 548
MS.gene39848.t1 MTR_2g098030 30.752 1330 759 37 95 1349 3 1245 6.93e-163 523
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene39848.t1 AT2G27150 60.720 1362 496 10 16 1373 3 1329 0.0 1680
MS.gene39848.t1 AT2G27150 60.720 1362 496 10 16 1373 3 1329 0.0 1680
MS.gene39848.t1 AT3G43600 60.395 1366 482 15 15 1373 2 1315 0.0 1662
MS.gene39848.t1 AT1G04580 59.386 1369 504 13 16 1372 6 1334 0.0 1656
MS.gene39848.t1 AT5G20960 58.969 1377 527 17 10 1375 15 1364 0.0 1606
MS.gene39848.t1 AT5G20960 58.969 1377 527 17 10 1375 15 1364 0.0 1606
MS.gene39848.t1 AT2G27150 59.375 1248 468 10 130 1373 1 1213 0.0 1519
MS.gene39848.t1 AT2G27150 59.375 1248 468 10 130 1373 1 1213 0.0 1519
MS.gene39848.t1 AT2G27150 59.398 1197 447 10 16 1208 3 1164 0.0 1434
MS.gene39848.t1 AT2G27150 57.710 1083 419 10 130 1208 1 1048 0.0 1271
MS.gene39848.t1 AT4G34890 31.668 1421 794 40 11 1352 12 1334 2.69e-171 548
MS.gene39848.t1 AT4G34900 31.399 1430 790 39 9 1352 2 1326 5.46e-167 536
MS.gene39848.t1 AT4G34900 30.952 1344 738 38 95 1352 3 1242 1.38e-157 509
MS.gene39848.t1 AT4G34900 29.863 1239 707 34 9 1180 2 1145 3.96e-128 426
MS.gene39848.t1 AT1G02590 66.000 50 17 0 1192 1241 26 75 1.63e-17 79.3

Find 301 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTGGGGTTGAACTCTTTC+TGG 0.120155 5.4:-68732045 MS.gene39848:CDS
CCCTGCTCATCTTCCATTTC+AGG 0.160584 5.4:+68725587 None:intergenic
GATAACATTAGAGGAATTTC+TGG 0.182722 5.4:-68731423 MS.gene39848:CDS
ATTGGAGCAAAGACAATATT+TGG 0.188110 5.4:-68730352 MS.gene39848:CDS
GGAATGTGTGTTTCACTCTT+TGG 0.220249 5.4:-68732241 MS.gene39848:CDS
GTCAACCAAAGGATCATATT+TGG 0.226270 5.4:+68732429 None:intergenic
GCATCGTGTGCTTTCCTCTA+AGG 0.247598 5.4:-68726317 MS.gene39848:CDS
GATATATCACCAACGTGTTT+TGG 0.248339 5.4:+68730030 None:intergenic
CTCAACCCTGCTGTGGATTT+AGG 0.264694 5.4:-68726937 MS.gene39848:CDS
GATCAATCAGGGATTGAAAT+TGG 0.273893 5.4:-68731704 MS.gene39848:CDS
AAAGGAGCTTCAGAACTTAT+TGG 0.274555 5.4:-68731870 MS.gene39848:CDS
AAGCATTAAAATTCCAAGTT+TGG 0.276510 5.4:-68731366 MS.gene39848:CDS
TTCTTGATCCATACCCTTAG+AGG 0.277911 5.4:+68726303 None:intergenic
AGCCCTGAATTGCGGCTAAA+TGG 0.280420 5.4:-68730424 MS.gene39848:CDS
AATTGTCAAGAGCCACCTTC+TGG 0.285050 5.4:-68732190 MS.gene39848:CDS
GAATATGAAACAGATCTTAA+TGG 0.287165 5.4:-68726439 MS.gene39848:CDS
AGTACACTTTCCAAACTTAA+TGG 0.287661 5.4:+68731392 None:intergenic
GGAAAGACCACCATTAAGTT+TGG 0.289701 5.4:-68731402 MS.gene39848:CDS
ATTACTCGAACATTACTTTC+AGG 0.295763 5.4:+68729651 None:intergenic
TGATGTTGATATGGAGGATT+TGG 0.299273 5.4:-68732062 MS.gene39848:CDS
GAATGTGTGTTTCACTCTTT+GGG 0.305217 5.4:-68732240 MS.gene39848:CDS
CCGATTCATGAAAGGTTTGC+AGG 0.307070 5.4:-68732298 MS.gene39848:CDS
ACTCCAACTTTATTGTCATC+TGG 0.307981 5.4:-68730858 MS.gene39848:CDS
TGCAACCATGCCTGTGGTTA+AGG 0.311326 5.4:-68725641 MS.gene39848:CDS
GATATCAGTTTGAAGAAATC+TGG 0.313531 5.4:+68726981 None:intergenic
TTGAATTGGGTCAGGGTCTC+TGG 0.314204 5.4:-68728066 MS.gene39848:CDS
AGTATACCTTGCCTTCAATA+TGG 0.315312 5.4:-68728276 MS.gene39848:CDS
GTCTCAATACTATTTCTATA+TGG 0.316640 5.4:-68729784 MS.gene39848:CDS
AATGCTCCATGTAAGCAATT+TGG 0.318094 5.4:+68730493 None:intergenic
GCACAGGCCCACCAGTTTAA+AGG 0.321460 5.4:-68731888 MS.gene39848:CDS
AATCCATTTAGCCGCAATTC+AGG 0.330297 5.4:+68730421 None:intergenic
GATGCTTGTAGGCTGTCTTT+TGG 0.335416 5.4:-68731188 MS.gene39848:CDS
TTCCTTGTTGAGGTGTCTCC+AGG 0.336485 5.4:-68731236 MS.gene39848:CDS
GATGTTGATATGGAGGATTT+GGG 0.337632 5.4:-68732061 MS.gene39848:CDS
GCAATCTCTTCTGCAAATAA+AGG 0.340830 5.4:+68730322 None:intergenic
TCGATGATGTACCTCAATTA+TGG 0.343681 5.4:-68727212 MS.gene39848:CDS
AACATTGTATGTTATCTTCA+TGG 0.344392 5.4:+68728645 None:intergenic
TCATTCTATGATCATTGTTA+TGG 0.348730 5.4:-68728310 MS.gene39848:CDS
CAAGGAAACAGCTTCTTTCA+TGG 0.355336 5.4:-68725708 MS.gene39848:CDS
ATGGGAGACACTTATTCTTC+AGG 0.357039 5.4:-68727801 MS.gene39848:intron
GCATCTTCAACAGATAAAAT+AGG 0.358083 5.4:+68730096 None:intergenic
CCTGGCTCCATTGGCGTCAC+TGG 0.359969 5.4:+68731835 None:intergenic
AGCCAGTGTAGGTGGCAATT+TGG 0.360862 5.4:-68731543 MS.gene39848:CDS
AAGTTGCCTCTGGGTTTATT+CGG 0.362138 5.4:-68731571 MS.gene39848:CDS
TTTGTCGCTGCACTGGTTAT+CGG 0.365984 5.4:-68732117 MS.gene39848:CDS
TACTTTGTCCAAGAGACTTC+CGG 0.373679 5.4:+68727988 None:intergenic
AATTTCCAAATATGATCCTT+TGG 0.373997 5.4:-68732434 MS.gene39848:CDS
GAGGGCCCCTGGGGAAGTGC+AGG 0.375620 5.4:-68728437 MS.gene39848:CDS
AACAGCTTACCGTTCAAGTT+TGG 0.375902 5.4:-68731027 MS.gene39848:CDS
TAGTCAGAAACTTGCAGATA+TGG 0.378413 5.4:-68730166 MS.gene39848:CDS
TTGACAATTAGTCTTCTTCT+CGG 0.382184 5.4:+68732204 None:intergenic
AAAGTTGTTGTGAATAATAC+TGG 0.383435 5.4:-68731809 MS.gene39848:CDS
GGGTTTGTTGTTGTTGAAGT+TGG 0.383716 5.4:-68728094 MS.gene39848:CDS
GCAGCTCCCGATTTAATGAT+TGG 0.384823 5.4:+68730789 None:intergenic
CATTACCCGCTTCAAGGACT+TGG 0.386955 5.4:+68730832 None:intergenic
TGGAAAGCCAATCATTAAAT+CGG 0.388993 5.4:-68730796 MS.gene39848:CDS
AAGATCAGAAAGGATCAATC+AGG 0.390812 5.4:-68731716 MS.gene39848:CDS
GAGGCTGAAAAGGCTATTGC+AGG 0.393419 5.4:-68732145 MS.gene39848:CDS
AGAAATTATGTCGCCCTGTC+AGG 0.393516 5.4:-68728717 MS.gene39848:CDS
GGCCCTCATTGCAGATCTAC+TGG 0.394323 5.4:+68728453 None:intergenic
TTAACCACAGGCATGGTTGC+AGG 0.394614 5.4:+68725643 None:intergenic
GTTCTGAAGCTCCTTTAAAC+TGG 0.394660 5.4:+68731877 None:intergenic
TGATTCAACATTTCAGTTGC+GGG 0.396271 5.4:-68725668 MS.gene39848:CDS
AGGAAAGCAGCATTTAAGTA+TGG 0.398894 5.4:+68731254 None:intergenic
AACTGAAGCAAAGTAGTTGA+TGG 0.398984 5.4:+68733810 None:intergenic
ATTTGAATGGATAACATTAG+AGG 0.402968 5.4:-68731432 MS.gene39848:CDS
TTAATGATTGGCTTTCCAAC+GGG 0.404794 5.4:+68730801 None:intergenic
TCGAAAGACAGATATGATAA+TGG 0.409902 5.4:-68728683 MS.gene39848:CDS
CAGATACGGGCTCTATCAAA+TGG 0.411027 5.4:-68727820 MS.gene39848:CDS
CAGGCTTAGCTGCAGTATCT+TGG 0.411614 5.4:-68727879 MS.gene39848:CDS
GAAGTCTCTTGGACAAAGTA+AGG 0.418571 5.4:-68727985 MS.gene39848:CDS
TGGAGGAATTGAATTGGGTC+AGG 0.423133 5.4:-68728074 MS.gene39848:CDS
TACTTCAATAGCTTTAGATA+TGG 0.423254 5.4:+68731670 None:intergenic
TTGTTGGTTGCAGGTGGTTG+TGG 0.423686 5.4:-68732472 MS.gene39848:intron
GTGTCTCCAGGTGAAAATTC+TGG 0.425787 5.4:-68731224 MS.gene39848:CDS
CTGAAAACTGAAAATGAGTA+TGG 0.426124 5.4:-68733916 None:intergenic
CACGTCGAAGTTGGTTTCTC+CGG 0.428344 5.4:+68730956 None:intergenic
AGATCTTAATGGTTTGTCAT+TGG 0.428756 5.4:-68726428 MS.gene39848:CDS
AACTGAAGTTGCTAGAAGTA+AGG 0.432694 5.4:+68725762 None:intergenic
GAAATTTAACATTCTTGTGC+TGG 0.433011 5.4:+68731969 None:intergenic
TTTGAACATTAAACTGTTGA+GGG 0.433694 5.4:+68726362 None:intergenic
ACCTGAAATGGAAGATGAGC+AGG 0.434983 5.4:-68725588 MS.gene39848:CDS
CTCCAACTTTATTGTCATCT+GGG 0.439075 5.4:-68730857 MS.gene39848:CDS
TCACCACCAAATTGCTTACA+TGG 0.441078 5.4:-68730499 MS.gene39848:CDS
ACAATTCAATGTGACGAAAC+CGG 0.441204 5.4:-68728007 MS.gene39848:CDS
ACTTCTTGCTGTGGACTCAA+TGG 0.442199 5.4:-68731477 MS.gene39848:CDS
GTAATGCAATTGTCTTCGTC+TGG 0.443011 5.4:+68729738 None:intergenic
TACCGTTTCTGAGGCTGAAA+AGG 0.443300 5.4:-68732155 MS.gene39848:CDS
TTCATCTTTAGGTACAATAG+TGG 0.443890 5.4:+68731058 None:intergenic
ATGAGTAAACTCAGGGCATT+GGG 0.446021 5.4:+68729701 None:intergenic
TGAAGATAACATACAATGTT+GGG 0.449813 5.4:-68728642 MS.gene39848:CDS
CAGAGGCAACTTTACTCATA+TGG 0.450721 5.4:+68731582 None:intergenic
AATGTTGGGTTCAAGAATGA+TGG 0.452588 5.4:-68728628 MS.gene39848:CDS
AGTAGTTGATGGATCAACTT+TGG 0.453240 5.4:+68733821 None:intergenic
TAGACGTTCGCCGACACATC+TGG 0.453483 5.4:+68730300 None:intergenic
TGAAGTTGGAGGAATTGAAT+TGG 0.453647 5.4:-68728080 MS.gene39848:CDS
AATGCAAAATCCTTCACAAA+AGG 0.455224 5.4:+68730915 None:intergenic
CACGTTGGTGATATATCAAA+AGG 0.455635 5.4:-68730024 MS.gene39848:CDS
CTCCATTGGCGTCACTGGCA+TGG 0.457476 5.4:+68731840 None:intergenic
GATATTCATTACCCGCTTCA+AGG 0.457937 5.4:+68730826 None:intergenic
TTGTAGAAAGATACCTGAAA+TGG 0.457968 5.4:-68725600 MS.gene39848:CDS
CGATTTAGATACATCCTGAC+AGG 0.458766 5.4:+68728703 None:intergenic
TGACGAAACCGGAAGTCTCT+TGG 0.459097 5.4:-68727996 MS.gene39848:CDS
CATATGAGTAAAGTTGCCTC+TGG 0.462187 5.4:-68731581 MS.gene39848:CDS
GCTTCTTTCATGGAGCAACT+TGG 0.462636 5.4:-68725698 MS.gene39848:CDS
AAGAGTGAAACACACATTCC+AGG 0.462764 5.4:+68732244 None:intergenic
AGTTTAACAGAATTAGTACT+TGG 0.464285 5.4:-68728201 MS.gene39848:CDS
AATGATCCCTGCACTTCCCC+AGG 0.464710 5.4:+68728430 None:intergenic
GAAGTTGGAGGAATTGAATT+GGG 0.469203 5.4:-68728079 MS.gene39848:CDS
CCTGCAAACCTTTCATGAAT+CGG 0.469701 5.4:+68732298 None:intergenic
GCTAACTTACTCCATATTGA+AGG 0.469977 5.4:+68728265 None:intergenic
TTATGAGCAAAGAATTGAAA+TGG 0.471183 5.4:-68728230 MS.gene39848:CDS
TGTGAAATTCAGGTGAAACT+TGG 0.471229 5.4:-68729807 MS.gene39848:intron
TACATCATCGAGTTATTGTT+GGG 0.472478 5.4:+68727224 None:intergenic
GGAAAAGCTGAAGGCAGATA+CGG 0.475756 5.4:-68727834 MS.gene39848:CDS
TACCGTTCAAGTTTGGCAGC+TGG 0.475910 5.4:-68731020 MS.gene39848:CDS
TTCTTTAATAGCTGCTCTTG+TGG 0.476362 5.4:+68725732 None:intergenic
AATGAGTAAACTCAGGGCAT+TGG 0.477125 5.4:+68729700 None:intergenic
AGATCTGCAATGAGGGCCCC+TGG 0.477303 5.4:-68728448 MS.gene39848:CDS
GGTCCATGATAGATGCTTGT+AGG 0.479012 5.4:-68731199 MS.gene39848:CDS
ATTGTCAAGAGCCACCTTCT+GGG 0.479149 5.4:-68732189 MS.gene39848:CDS
ATCCATTTAGCCGCAATTCA+GGG 0.480081 5.4:+68730422 None:intergenic
CTGAGAAACACGGCTGGCAC+AGG 0.480247 5.4:-68731904 MS.gene39848:CDS
TGCAGGTGAGGCTGTATTTG+TGG 0.480256 5.4:-68730533 MS.gene39848:intron
GTACATCATCGAGTTATTGT+TGG 0.480903 5.4:+68727223 None:intergenic
ACCTGTCCTAAATCCACAGC+AGG 0.484206 5.4:+68726931 None:intergenic
TTCCCAGATGACAATAAAGT+TGG 0.484639 5.4:+68730855 None:intergenic
GAGTAATTACAAGAAGGGTC+GGG 0.484682 5.4:-68729635 MS.gene39848:CDS
GATACCATCCTGCAGATTGA+AGG 0.485211 5.4:-68726499 MS.gene39848:intron
ATATCCGTTCACGTCGAAGT+TGG 0.488174 5.4:+68730947 None:intergenic
AGTCATGCTGTGAAGCAGTC+AGG 0.490880 5.4:-68727898 MS.gene39848:CDS
CCGAGTTTAACACTCTTGAA+TGG 0.491117 5.4:+68733771 None:intergenic
CTGGACGAAGGTTAAACAAA+TGG 0.491295 5.4:-68728047 MS.gene39848:CDS
CATCGTGTGCTTTCCTCTAA+GGG 0.491812 5.4:-68726316 MS.gene39848:intron
TGTTGTGAATAATACTGGTA+TGG 0.492861 5.4:-68731804 MS.gene39848:CDS
ACATTGTATGTTATCTTCAT+GGG 0.495139 5.4:+68728646 None:intergenic
ATGAAGATAACATACAATGT+TGG 0.496764 5.4:-68728643 MS.gene39848:CDS
GAAGGCAAGGTATACTCAAA+AGG 0.497702 5.4:+68728283 None:intergenic
TTTGTTGTTGTTGAAGTTGG+AGG 0.499663 5.4:-68728091 MS.gene39848:CDS
CGAGTAATTACAAGAAGGGT+CGG 0.501180 5.4:-68729636 MS.gene39848:CDS
AAATGCTGCTTTCCTTGTTG+AGG 0.501446 5.4:-68731246 MS.gene39848:CDS
GGGAACCTTTGTCGCTGCAC+TGG 0.502740 5.4:-68732124 MS.gene39848:CDS
TGAATGGCACACAATTTGAA+TGG 0.507343 5.4:-68731445 MS.gene39848:CDS
GATACAGTGAGCTTGATTCA+AGG 0.507611 5.4:-68727950 MS.gene39848:CDS
CGAGCTTCTCCTAGACAGCT+TGG 0.509772 5.4:-68731287 MS.gene39848:CDS
CACCAAATTGCCACCTACAC+TGG 0.513059 5.4:+68731541 None:intergenic
AAGACAGATATGATAATGGC+TGG 0.513909 5.4:-68728679 MS.gene39848:CDS
GGAAAGCCAATCATTAAATC+GGG 0.514302 5.4:-68730795 MS.gene39848:CDS
GTTAAACTCGGTTGTGGTGA+AGG 0.515849 5.4:-68733759 MS.gene39848:intron
AGAGTCAGTTGATACGCAAC+TGG 0.517287 5.4:+68728154 None:intergenic
ATTTGAACATTAAACTGTTG+AGG 0.518786 5.4:+68726361 None:intergenic
ACACTACTTTGTAGCATACA+TGG 0.519645 5.4:-68732373 MS.gene39848:CDS
TAGAGGAAAGCACACGATGC+TGG 0.520027 5.4:+68726320 None:intergenic
CTTGAGATATTGATCAATGC+TGG 0.523080 5.4:-68728586 MS.gene39848:CDS
TGAAGCTCCTTTAAACTGGT+GGG 0.523102 5.4:+68731881 None:intergenic
GTGAAATTCAGGTGAAACTT+GGG 0.524542 5.4:-68729806 MS.gene39848:intron
AGGGCATTTCCAAGCTGTCT+AGG 0.526375 5.4:+68731278 None:intergenic
CTGAAGCTCCTTTAAACTGG+TGG 0.527833 5.4:+68731880 None:intergenic
CTGACTCTACGACCAACGCC+TGG 0.528138 5.4:-68728139 MS.gene39848:CDS
CCCTGCTGTGGATTTAGGAC+AGG 0.528247 5.4:-68726932 MS.gene39848:intron
TCAATGGTTCATATAATGAA+TGG 0.528482 5.4:-68731461 MS.gene39848:CDS
AGAGTGAAACACACATTCCA+GGG 0.528965 5.4:+68732245 None:intergenic
TGCTGCTGATGTTGATATGG+AGG 0.529902 5.4:-68732068 MS.gene39848:CDS
TGATAAGTATATTGATCTGA+AGG 0.530273 5.4:-68731756 MS.gene39848:CDS
CCAGTGACGCCAATGGAGCC+AGG 0.530970 5.4:-68731835 MS.gene39848:CDS
TGTCATTGGCAGACGGCACA+TGG 0.533905 5.4:-68726414 MS.gene39848:CDS
CGATTCATGAAAGGTTTGCA+GGG 0.535623 5.4:-68732297 MS.gene39848:CDS
AGGGCCCCTGGGGAAGTGCA+GGG 0.536468 5.4:-68728436 MS.gene39848:CDS
CTCAAAAGTTACCGTTTCTG+AGG 0.540572 5.4:-68732164 MS.gene39848:CDS
AGTAATTACAAGAAGGGTCG+GGG 0.541016 5.4:-68729634 MS.gene39848:CDS
TGTTGCAGCCACACTTTCAG+TGG 0.541099 5.4:-68728383 MS.gene39848:CDS
AAGAGTGTTAAACTCGGTTG+TGG 0.542468 5.4:-68733765 MS.gene39848:CDS
CCGGCAGTAGTTTCAACTAG+AGG 0.544069 5.4:+68730975 None:intergenic
CCTGTGGTTAAGGAACTCAT+TGG 0.544404 5.4:-68725631 MS.gene39848:CDS
GGGTTTCATGCTTCTCAATG+TGG 0.544526 5.4:-68732277 MS.gene39848:CDS
TCTACTATAGCAAGATGCCT+TGG 0.545821 5.4:-68729678 MS.gene39848:CDS
GCTGCAGTATCTTGGTTGAG+AGG 0.545901 5.4:-68727871 MS.gene39848:CDS
GAAAAGCTGAAGGCAGATAC+GGG 0.548213 5.4:-68727833 MS.gene39848:CDS
GGAGCTGCGCTACAAGCTAC+AGG 0.550843 5.4:-68730774 MS.gene39848:intron
GTAAAGACATTCCTAGTGGT+GGG 0.551345 5.4:-68730381 MS.gene39848:CDS
TGTAAGCAATTTGGTGGTGA+AGG 0.551825 5.4:+68730502 None:intergenic
TCCTTTGGTTGACAGAGTTG+AGG 0.551997 5.4:-68732419 MS.gene39848:CDS
TGTTCGAGTAATTACAAGAA+GGG 0.552792 5.4:-68729640 MS.gene39848:CDS
TCCCAGTAGATCTGCAATGA+GGG 0.553628 5.4:-68728455 MS.gene39848:CDS
GATCTGCAATGAGGGCCCCT+GGG 0.553728 5.4:-68728447 MS.gene39848:CDS
GTGATTCAACATTTCAGTTG+CGG 0.554564 5.4:-68725669 MS.gene39848:CDS
ACGGAGTCTCAACCCTGCTG+TGG 0.554639 5.4:-68726944 MS.gene39848:CDS
ATAGTAGAATGAGTAAACTC+AGG 0.554898 5.4:+68729693 None:intergenic
CAGCCTACAAGCATCTATCA+TGG 0.555012 5.4:+68731196 None:intergenic
CCTAGTGGTGGGGAAAACAT+TGG 0.555557 5.4:-68730370 MS.gene39848:CDS
ATACAGTGAGCTTGATTCAA+GGG 0.557138 5.4:-68727949 MS.gene39848:CDS
CGGCAGTAGTTTCAACTAGA+GGG 0.557309 5.4:+68730976 None:intergenic
TTTAATGATTGGCTTTCCAA+CGG 0.558146 5.4:+68730800 None:intergenic
TGGTGATATATCAAAAGGAA+TGG 0.559632 5.4:-68730019 MS.gene39848:CDS
GGCATTGGAAATAGCAAACA+AGG 0.561122 5.4:-68732328 MS.gene39848:CDS
TCTCCAGGTGAAAATTCTGG+TGG 0.561917 5.4:-68731221 MS.gene39848:CDS
TGTTACAATACTTCTTGCTG+TGG 0.562158 5.4:-68731486 MS.gene39848:CDS
GAAACCAACTTCGACGTGAA+CGG 0.562247 5.4:-68730951 MS.gene39848:CDS
ATAACAACAAGTGAAGGCAT+TGG 0.565209 5.4:-68732343 MS.gene39848:CDS
GATTGCATCCGATTCATGAA+AGG 0.565763 5.4:-68732306 MS.gene39848:CDS
AAGCAGCATTTAAGTATGGA+AGG 0.566041 5.4:+68731258 None:intergenic
TGAGGGATAGTGTCTATCGT+AGG 0.567492 5.4:+68726379 None:intergenic
CTGGAGAAAAGAAGAAAGCA+AGG 0.568437 5.4:-68732026 MS.gene39848:CDS
TGTAGGTGGCAATTTGGTGT+TGG 0.569663 5.4:-68731537 MS.gene39848:CDS
GCCCTCATTGCAGATCTACT+GGG 0.570896 5.4:+68728454 None:intergenic
TCCTCAACTCTGTCAACCAA+AGG 0.571934 5.4:+68732418 None:intergenic
CAAATGGCTGCATTCTCCCT+CGG 0.572031 5.4:-68728031 MS.gene39848:CDS
GGGAACCAAGTCCTTGAAGC+GGG 0.572505 5.4:-68730837 MS.gene39848:CDS
ATGTTGGGTTCAAGAATGAT+GGG 0.575275 5.4:-68728627 MS.gene39848:CDS
AGTAAAGACATTCCTAGTGG+TGG 0.575771 5.4:-68730382 MS.gene39848:CDS
CTTACTCCATATTGAAGGCA+AGG 0.576357 5.4:+68728270 None:intergenic
CCAATGAGTTCCTTAACCAC+AGG 0.577549 5.4:+68725631 None:intergenic
GCCTCTCAAGGAAAAGCTGA+AGG 0.578146 5.4:-68727843 MS.gene39848:CDS
TTACTGCGGCACCATAATTG+AGG 0.580122 5.4:+68727201 None:intergenic
AGATACGGGCTCTATCAAAT+GGG 0.581564 5.4:-68727819 MS.gene39848:CDS
ATACTCCTTATCCTTGCCAG+TGG 0.582025 5.4:+68730454 None:intergenic
GAGGGATAGTGTCTATCGTA+GGG 0.582399 5.4:+68726380 None:intergenic
TGCGGCACTGCCGCATAACA+TGG 0.582407 5.4:-68728545 MS.gene39848:CDS
GAAGAGATTGCCAGATGTGT+CGG 0.583193 5.4:-68730310 MS.gene39848:CDS
GATCAATGCTGGTATATATG+TGG 0.583963 5.4:-68728575 MS.gene39848:CDS
ATCTACATCCACTGAAAGTG+TGG 0.585121 5.4:+68728375 None:intergenic
ATGTTGATATGGAGGATTTG+GGG 0.587628 5.4:-68732060 MS.gene39848:CDS
GGTTAAGGAACTCATTGGAC+TGG 0.588391 5.4:-68725626 MS.gene39848:CDS
AATGGTTTGTCATTGGCAGA+CGG 0.588684 5.4:-68726421 MS.gene39848:CDS
CGGAATACAGCCAGTGTAGG+TGG 0.588893 5.4:-68731551 MS.gene39848:CDS
ATGATCCCTGCACTTCCCCA+GGG 0.591389 5.4:+68728431 None:intergenic
GATAACCAGTGCAGCGACAA+AGG 0.591470 5.4:+68732119 None:intergenic
TGAGCTCTCAAAGATCAGAA+AGG 0.591501 5.4:-68731726 MS.gene39848:CDS
GTGGAAATAGATCTACTGAC+AGG 0.592865 5.4:-68727009 MS.gene39848:CDS
AATGTTCAAATTCTCAACAG+TGG 0.594277 5.4:-68726349 MS.gene39848:CDS
CTCCAGGTGAAAATTCTGGT+GGG 0.596913 5.4:-68731220 MS.gene39848:CDS
ATATGAGTAAAGTTGCCTCT+GGG 0.602295 5.4:-68731580 MS.gene39848:CDS
TAAAGACATTCCTAGTGGTG+GGG 0.602301 5.4:-68730380 MS.gene39848:CDS
TGAGAGGTTAAAGCCTCTCA+AGG 0.602913 5.4:-68727855 MS.gene39848:CDS
GGTAATGAATATCACCCCGT+TGG 0.603364 5.4:-68730816 MS.gene39848:CDS
CCTCTAGTTGAAACTACTGC+CGG 0.604455 5.4:-68730975 MS.gene39848:CDS
GAGTTCCTTAACCACAGGCA+TGG 0.604633 5.4:+68725636 None:intergenic
TTCAATATCGTAATCGACAA+CGG 0.605573 5.4:+68730131 None:intergenic
ATATGATAATGGCTGGAGGA+AGG 0.605624 5.4:-68728672 MS.gene39848:CDS
GAGCAGCTATTAAAGAAGCA+AGG 0.606084 5.4:-68725726 MS.gene39848:CDS
TAGTAGAATGAGTAAACTCA+GGG 0.607660 5.4:+68729694 None:intergenic
GTTGTGAATAATACTGGTAT+GGG 0.608344 5.4:-68731803 MS.gene39848:CDS
GGAGGAATTGAATTGGGTCA+GGG 0.609458 5.4:-68728073 MS.gene39848:CDS
AGATCAGAAAGGATCAATCA+GGG 0.609735 5.4:-68731715 MS.gene39848:CDS
AACCATGCCAGTGACGCCAA+TGG 0.611890 5.4:-68731842 MS.gene39848:CDS
TTCCCAGTAGATCTGCAATG+AGG 0.611952 5.4:-68728456 MS.gene39848:CDS
ATTCGGAATACAGCCAGTGT+AGG 0.612101 5.4:-68731554 MS.gene39848:CDS
TGTTCAATAACAACAAGTGA+AGG 0.612214 5.4:-68732349 MS.gene39848:CDS
TACAGTGAGCTTGATTCAAG+GGG 0.613500 5.4:-68727948 MS.gene39848:CDS
CAAGCTGTCTAGGAGAAGCT+CGG 0.614203 5.4:+68731288 None:intergenic
ACTGAAGTTGCTAGAAGTAA+GGG 0.615481 5.4:+68725763 None:intergenic
AGCCAGCTGCCAAACTTGAA+CGG 0.616315 5.4:+68731018 None:intergenic
ATGTTCGAGTAATTACAAGA+AGG 0.616344 5.4:-68729641 MS.gene39848:CDS
AAGTATTGTAACAATATCCG+AGG 0.616761 5.4:+68731496 None:intergenic
TTCACAGCATGACTCTGATG+TGG 0.617056 5.4:+68727907 None:intergenic
GATAAGTATATTGATCTGAA+GGG 0.620052 5.4:-68731755 MS.gene39848:CDS
AAGTCTCTTGGACAAAGTAA+GGG 0.621066 5.4:-68727984 MS.gene39848:CDS
GTCACATTGAATTGTACCGA+GGG 0.621112 5.4:+68728015 None:intergenic
ACAAAAGAGCAAGTTTCCCT+CGG 0.621719 5.4:-68731513 MS.gene39848:CDS
ATCTGCAATGAGGGCCCCTG+GGG 0.622628 5.4:-68728446 MS.gene39848:CDS
TAAAACTCAGCCCTGAATTG+CGG 0.624714 5.4:-68730432 MS.gene39848:CDS
ATATCATCTATGATTGCGGA+CGG 0.625796 5.4:-68726963 MS.gene39848:CDS
ACTGATATCATCTATGATTG+CGG 0.626310 5.4:-68726967 MS.gene39848:CDS
CACCTGGAGACACCTCAACA+AGG 0.629732 5.4:+68731234 None:intergenic
TATCCTCTGAGAAACACGGC+TGG 0.630938 5.4:-68731910 MS.gene39848:CDS
AGCAGCATTTAAGTATGGAA+GGG 0.632691 5.4:+68731259 None:intergenic
CGTCACATTGAATTGTACCG+AGG 0.634614 5.4:+68728014 None:intergenic
CCATTCAAGAGTGTTAAACT+CGG 0.635233 5.4:-68733771 MS.gene39848:CDS
TTATGGTGCCGCAGTAAGTG+AGG 0.636346 5.4:-68727195 MS.gene39848:intron
TTGTGCTGGTGCTCATATCG+AGG 0.637322 5.4:+68731983 None:intergenic
AGGCTGAAAAGGCTATTGCA+GGG 0.638825 5.4:-68732144 MS.gene39848:CDS
GTAATTACAAGAAGGGTCGG+GGG 0.643064 5.4:-68729633 MS.gene39848:CDS
GCTCCATGTAAGCAATTTGG+TGG 0.643256 5.4:+68730496 None:intergenic
ACACTTTCCAAACTTAATGG+TGG 0.645084 5.4:+68731395 None:intergenic
GGTTCCTGCAACCATGCCTG+TGG 0.649210 5.4:-68725647 MS.gene39848:CDS
GAAGTTGCTAGAAGTAAGGG+CGG 0.652082 5.4:+68725766 None:intergenic
TTCATATCCTCTGAGAAACA+CGG 0.654169 5.4:-68731914 MS.gene39848:CDS
AAGCTCGGTAAGTTTCAAAG+TGG 0.657473 5.4:+68731303 None:intergenic
TGGGAACCAAGTCCTTGAAG+CGG 0.657713 5.4:-68730838 MS.gene39848:CDS
TCTTCAACAGATAAAATAGG+TGG 0.658425 5.4:+68730099 None:intergenic
GATTTAGATACATCCTGACA+GGG 0.659769 5.4:+68728704 None:intergenic
GTGCCAGCCGTGTTTCTCAG+AGG 0.661604 5.4:+68731907 None:intergenic
TCACAAGATTCTATCTGCTG+AGG 0.661889 5.4:-68729986 MS.gene39848:intron
TAATGATTGGCTTTCCAACG+GGG 0.662171 5.4:+68730802 None:intergenic
TTTCTCTACCCAAAACACGT+TGG 0.663821 5.4:-68730039 MS.gene39848:CDS
ACACATTACCTCACTTACTG+CGG 0.665205 5.4:+68727187 None:intergenic
GGGTCAGGGTCTCTGGACGA+AGG 0.666463 5.4:-68728059 MS.gene39848:CDS
AGTATTGTAACAATATCCGA+GGG 0.668326 5.4:+68731497 None:intergenic
CATTACTTTCAGGAATACCA+AGG 0.671155 5.4:+68729661 None:intergenic
CAGTGAGCTTGATTCAAGGG+GGG 0.676154 5.4:-68727946 MS.gene39848:CDS
AGTGTACTGACCATGTTATG+CGG 0.676264 5.4:+68728535 None:intergenic
GGATATTACAAAGATAACGA+TGG 0.680269 5.4:-68731782 MS.gene39848:CDS
TATATATGTGGATATAAGTG+CGG 0.683802 5.4:-68728563 MS.gene39848:CDS
ACAGATATGATAATGGCTGG+AGG 0.683979 5.4:-68728676 MS.gene39848:CDS
TCAAGTAAAGACATTCCTAG+TGG 0.691390 5.4:-68730385 MS.gene39848:CDS
CCTGAAATGGAAGATGAGCA+GGG 0.693067 5.4:-68725587 MS.gene39848:CDS
ACAGTGAGCTTGATTCAAGG+GGG 0.707458 5.4:-68727947 MS.gene39848:CDS
CCTGTCCTAAATCCACAGCA+GGG 0.710740 5.4:+68726932 None:intergenic
TGATCCCTGCACTTCCCCAG+GGG 0.722809 5.4:+68728432 None:intergenic
GAGTGAAACACACATTCCAG+GGG 0.739085 5.4:+68732246 None:intergenic
TGTATTCCGAATAAACCCAG+AGG 0.770513 5.4:+68731565 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr5.4 gene 68725582 68733925 68725582 ID=MS.gene39848
chr5.4 mRNA 68725582 68733925 68725582 ID=MS.gene39848.t1;Parent=MS.gene39848
chr5.4 exon 68733760 68733925 68733760 ID=MS.gene39848.t1.exon1;Parent=MS.gene39848.t1
chr5.4 CDS 68733760 68733925 68733760 ID=cds.MS.gene39848.t1;Parent=MS.gene39848.t1
chr5.4 exon 68730775 68732481 68730775 ID=MS.gene39848.t1.exon2;Parent=MS.gene39848.t1
chr5.4 CDS 68730775 68732481 68730775 ID=cds.MS.gene39848.t1;Parent=MS.gene39848.t1
chr5.4 exon 68730291 68730550 68730291 ID=MS.gene39848.t1.exon3;Parent=MS.gene39848.t1
chr5.4 CDS 68730291 68730550 68730291 ID=cds.MS.gene39848.t1;Parent=MS.gene39848.t1
chr5.4 exon 68729987 68730196 68729987 ID=MS.gene39848.t1.exon4;Parent=MS.gene39848.t1
chr5.4 CDS 68729987 68730196 68729987 ID=cds.MS.gene39848.t1;Parent=MS.gene39848.t1
chr5.4 exon 68729599 68729817 68729599 ID=MS.gene39848.t1.exon5;Parent=MS.gene39848.t1
chr5.4 CDS 68729599 68729817 68729599 ID=cds.MS.gene39848.t1;Parent=MS.gene39848.t1
chr5.4 exon 68727802 68728767 68727802 ID=MS.gene39848.t1.exon6;Parent=MS.gene39848.t1
chr5.4 CDS 68727802 68728767 68727802 ID=cds.MS.gene39848.t1;Parent=MS.gene39848.t1
chr5.4 exon 68727196 68727291 68727196 ID=MS.gene39848.t1.exon7;Parent=MS.gene39848.t1
chr5.4 CDS 68727196 68727291 68727196 ID=cds.MS.gene39848.t1;Parent=MS.gene39848.t1
chr5.4 exon 68726933 68727031 68726933 ID=MS.gene39848.t1.exon8;Parent=MS.gene39848.t1
chr5.4 CDS 68726933 68727031 68726933 ID=cds.MS.gene39848.t1;Parent=MS.gene39848.t1
chr5.4 exon 68726317 68726506 68726317 ID=MS.gene39848.t1.exon9;Parent=MS.gene39848.t1
chr5.4 CDS 68726317 68726506 68726317 ID=cds.MS.gene39848.t1;Parent=MS.gene39848.t1
chr5.4 exon 68725582 68725799 68725582 ID=MS.gene39848.t1.exon10;Parent=MS.gene39848.t1
chr5.4 CDS 68725582 68725799 68725582 ID=cds.MS.gene39848.t1;Parent=MS.gene39848.t1
Gene Sequence

>MS.gene39848

ATGAGTATGGAAGTGAAGAAGAGTGAGCAGAATCAAACAACAAGTTTAATTTTCTGTGTTAATGGTGAAAAGTTTGAGTTATCCAAAGTTGATCCATCAACTACTTTGCTTCAGTTCTTACGTACTCAAACTCCATTCAAGAGTGTTAAACTCGGTTGTGGTGAAGGTATATATCATCATATCACAATTATGATTATTGCTTTTAATTTCATTAAGCTCACATAAGCACTTGTGAGAATAGCTTATGAAAACAGCTTATGATATGTTCATAACTCATAAGGTGTTTTCATCTTAATCTTATTTTCATAAGTTCTCCAAAACTGCTATTAAACCTTTATTTTTTGTATTTTTTTGAAGTTAAAATGATTGTGATACTCATTTTAATGTATCATATTTCTTTGTGTTAATATCATACTTTCATGATTCAGAATGTTATAGCTTAGCTTAGTTAAATCCTGAATTAGTTTTTATTGGAATGATTTTCCATTTCTAGATCCAATGAATTAGTACACTTTTTTTTTTTTAGAATCCTAAGATGCTAAAGAATTTGATTCCTCTAAAGTTGGAGGTTAGAATTGTCAAGTTGAAAAATTATTGTTGAGCTTTTAAGGATTTCGTAATTTGCGATACATGTTTGTGTTTGATTATTTGTTGAAAAGCTAACAGATCCAAAGCTAAGATAATAGAAGAATTAAATAACTTTGCAAGATGGGATTACTCTGATCATAAGGATGGTAAGCCTTAACGGGTTCCTATTATCCCTCCGCTATATCAATAATTTTCCTGTGAACCAAGCATCTTGAAATGGATCTTCACTTTGTCTGCGAGAAAGATATCCAAACAATTTATTGTCAATCATGTTCATGCGTTTTATCAACCAAGTAGACATTTTCGCGAAACCTATTACCTCCACTCATTTTCTAAATTCTTAGCAAACTCAAAGTGTTCGCTTTCAATCAACCACAATAAACTTAGAGTTGTTATTTTGTTACCAACTGTCAGTGTTAGTTAATCCTCTTGTGTTTTGTACTGATCTATATAAATCCTCTCACCATAATTGATGAACGTAACTTGTACTCACAAAGTGTGATTATCAATCAGTAATATAAACTGAGTTTCAATCAATGCATTCTCTCTTGACAAAGAATAAGAAGTAGCTGCATTTTTTACAATATTTGAGAAAAAGAAAATAATGATTCCTCGTTATTACTATATTTTTTTGCTGATGGTTTGTTATGAAAGTGAAGGCGAAGAAGGTGTTTTTTTGTTTACAATGGAGCCATTGAGGTTTGAACCTATGACCTCATGCATGCTACCCAAACCCCTCACCACTAGATCATTCCTAGTGGCTTCGAAGAAGGTGTTAACTTTTAAAAGTTGATGAAAAATAGTCCTCAATTTTCTTTTCAACTTGGAACTTTATGCTTGGCATTGTTGGTTGCAGGTGGTTGTGGTGCTTGCGTAGTTTTAATTTCCAAATATGATCCTTTGGTTGACAGAGTTGAGGATTTTACAGCAAACTCATGTCTCACACTACTTTGTAGCATACATGGATGTTCAATAACAACAAGTGAAGGCATTGGAAATAGCAAACAAGGATTGCATCCGATTCATGAAAGGTTTGCAGGGTTTCATGCTTCTCAATGTGGCTTTTGTACCCCTGGAATGTGTGTTTCACTCTTTGGGACTCTTGTCAATGCCGAGAAGAAGACTAATTGTCAAGAGCCACCTTCTGGGTTCTCAAAAGTTACCGTTTCTGAGGCTGAAAAGGCTATTGCAGGGAACCTTTGTCGCTGCACTGGTTATCGGCCCATTGCTGATGCCTGCAAAAGTTTTGCTGCTGATGTTGATATGGAGGATTTGGGGTTGAACTCTTTCTGGAGAAAAGAAGAAAGCAAGGACTTACAGCTTAGTAAACTGCCTCGATATGAGCACCAGCACAAGAATGTTAAATTTCCTATGTTTTTGAAGGAAATAAAGAATGACTTGTTCATATCCTCTGAGAAACACGGCTGGCACAGGCCCACCAGTTTAAAGGAGCTTCAGAACTTATTGGAATTAAACCATGCCAGTGACGCCAATGGAGCCAGGATAAAAGTTGTTGTGAATAATACTGGTATGGGATATTACAAAGATAACGATGGCTATGATAAGTATATTGATCTGAAGGGCATTTCTGAGCTCTCAAAGATCAGAAAGGATCAATCAGGGATTGAAATTGGAGCAGCAGTGACCATATCTAAAGCTATTGAAGTACTAAAGCAGCAAAGCAAGAGTGACTTTATCTCAGACTTTGTAATGATACTTGAAAAGATTGCTGACCATATGAGTAAAGTTGCCTCTGGGTTTATTCGGAATACAGCCAGTGTAGGTGGCAATTTGGTGTTGGCACAAAAGAGCAAGTTTCCCTCGGATATTGTTACAATACTTCTTGCTGTGGACTCAATGGTTCATATAATGAATGGCACACAATTTGAATGGATAACATTAGAGGAATTTCTGGAAAGACCACCATTAAGTTTGGAAAGTGTACTTTTAAGCATTAAAATTCCAAGTTTGGAAACTGTTAAAAGTACATGTTCAGAACAAAAAAATAGATTCCACTTTGAAACTTACCGAGCTTCTCCTAGACAGCTTGGAAATGCCCTTCCATACTTAAATGCTGCTTTCCTTGTTGAGGTGTCTCCAGGTGAAAATTCTGGTGGGTCCATGATAGATGCTTGTAGGCTGTCTTTTGGTGCTTGTGGGAATAAGCATGCAATCAGAGCAAAAACTGTTGAGGAATTTTTAATTGGAAAGATGTTAAGTGTTAGCGTTATTTATGAAGCTATCAACTTACTTACAACCACTATTGTACCTAAAGATGAAAACTCTAAAACAGCTTACCGTTCAAGTTTGGCAGCTGGCTTTGTTTTTCAGTTCTTTAACCCTCTAGTTGAAACTACTGCCGGAGAAACCAACTTCGACGTGAACGGATATTCTAATTTGCCTTTTGTGAAGGATTTTGCATTTAAAGAGAATCAGAAGCAGCTTCATCACGACAAAACTCCAACTTTATTGTCATCTGGGAACCAAGTCCTTGAAGCGGGTAATGAATATCACCCCGTTGGAAAGCCAATCATTAAATCGGGAGCTGCGCTACAAGCTACAGGTTAGTTTTGTGTCATCTAGATTTGTTTTAGTTTACTGGCTGATTTCTATTATTTAATTACATGACAGAATCTAGTATTTATATTCATGCAAAATCCTATTTTCTAGAGGATGAGTCTCTGCGCTTACTTAATTCTGATTTGGGGTTTGTCAAATATGAATTTTTGTTAATAATTGTTTTAATTCCTGTCAAGTATCGAATATTCATGAATGAAGCATATGCAGGTGAGGCTGTATTTGTGGATGACATTCCTTCACCACCAAATTGCTTACATGGAGCATTTATTTATAGTGAAAAACCACTGGCAAGGATAAGGAGTATAAAACTCAGCCCTGAATTGCGGCTAAATGGATTGAAAGATATCATTTCAAGTAAAGACATTCCTAGTGGTGGGGAAAACATTGGAGCAAAGACAATATTTGGCATAGAACCTTTATTTGCAGAAGAGATTGCCAGATGTGTCGGCGAACGTCTAGCTTTTGTGGTGATTGCCGATCTAACAATTTGAGATTCTTTCTCGTTTCTTTGGAGATCAATGTGTGACACGCTACCTTATTACTCACCAATAGATTTTGTAGGTTGCAGATAGTCAGAAACTTGCAGATATGGCAGCAAACTCAACCGTTGTCGATTACGATATTGAAAATCTTGAACCACCTATTTTATCTGTTGAAGATGCCGTTAAAAGATCAAGCTTTTTTGAAGTTCCTCCTTTTCTCTACCCAAAACACGTTGGTGATATATCAAAAGGAATGGCTGAAGCTGATCACAAGATTCTATCTGCTGAGGTACATGGAATACATTTATTTTTCTCCTTTCTTTCTCCTCTTGCTTTCATTTCACAGCATTGTGGTCATCTACCTTTGTTTCTAATGAGATGTATAAGTTTGCTGCTGTATAAGTTATGTTGAAATGGTTATATGTTGGTCAAACTTATTCACTCAATGTGAAATTCAGGTGAAACTTGGGTCTCAATACTATTTCTATATGGAGACACAAACTGCACTTGCTGTTCCAGACGAAGACAATTGCATTACAGTTTACTCTTCATCCCAATGCCCTGAGTTTACTCATTCTACTATAGCAAGATGCCTTGGTATTCCTGAAAGTAATGTTCGAGTAATTACAAGAAGGGTCGGGGGAGGTTTTGGAGGAAAGGCCATAAAAGCAATATCTGTAAGTATGAAGTTTGGTATTAATATTTTAAATAATTTATTAAATGTTTTTCACTTTTGAAGTACCATTAACTAATAACTATTGCAGTGTAAACATGACTCCTGAATTTTCTGTAGTTTGGAGAAGTCGCTGATATTAGAAGATAATGAAGAAAAGAAATCTGAGAAGATATCAATTTGAATTTAAATTTGATTTAAATTCAACTTATAGATAAATAAAAAATAATGTGGTAGTTTTTAAAAAAGTCACATGAGTGCTTGTTAAAGTGAGTTTTGTAACTCTTTCATGGTGAAGATTCTCATTTAGGAGTTCTTAGAACTTGGGTTGGGCTTAACTCAACCTTACAAAATCAGCTTTTTAAGGTGATGCCTTCCCAAGCCTAATAAGAATTGCATAGGTTATATATTTAAGCAATGTGGGACTAAATCCCCCCCTTCATACCCAACACAATGAAGGTGTTGGAAGCCACACATAAGGCAGCTCAAATGCCGCAATTAGGCGTCTAGGTGTGGACCGCAATGAAGACGAAATTTCCAACAAGAGTGAATATCAGTTGCTTCTTTCCATTACTTGCTATAAATATGAGCGACATTGCTCTTTGCATGCTAAATTGTCCACGGTAACATTTGAATTAGTATAAAAAAAGTTCATTGTACTTTTGTCATTTTCATTTCCTAGTTGTTCCAAAATATTTGGTGCTTTAGCCTTTCCCTTTATCCACGTTATACATGTGATCACAGAAATTATTTATTAGGAGAATTATACATGAAAACTATGTCCAAACATATAAATATATCCCAACTACTGACAAGTGACAACCATATCATGCAGACTGCTACATCTTGTGCACTCGCAGCACAGAAATTATGTCGCCCTGTCAGGATGTATCTAAATCGAAAGACAGATATGATAATGGCTGGAGGAAGGCATCCCATGAAGATAACATACAATGTTGGGTTCAAGAATGATGGGAAAATTACTGCATTAGAGCTTGAGATATTGATCAATGCTGGTATATATGTGGATATAAGTGCGGCACTGCCGCATAACATGGTCAGTACACTAAAAAAGTATGACTGGGGTGCGCTATCTTTTGATATAAAGGTATGCAGAACAAATCTTCCCAGTAGATCTGCAATGAGGGCCCCTGGGGAAGTGCAGGGATCATTTATTGCTGAAGCTGTTATAGAAAATGTTGCAGCCACACTTTCAGTGGATGTAGATACTATCAGAAGCATTAATCTTCATACATACAAAAGTCTTCAGTCATTCTATGATCATTGTTATGGAGAACCTTTTGAGTATACCTTGCCTTCAATATGGAGTAAGTTAGCTATTTCTGCAAATTATGAGCAAAGAATTGAAATGGTGAAAGAGTTTAACAGAATTAGTACTTGGAAAAAAAGGGGAATTTCTCGAGTACCAGTTGCGTATCAACTGACTCTACGACCAACGCCTGGAAAAGTGAGTATTTTATCGGATGGGTTTGTTGTTGTTGAAGTTGGAGGAATTGAATTGGGTCAGGGTCTCTGGACGAAGGTTAAACAAATGGCTGCATTCTCCCTCGGTACAATTCAATGTGACGAAACCGGAAGTCTCTTGGACAAAGTAAGGGTCGTACAAGCTGATACAGTGAGCTTGATTCAAGGGGGGTTCACTACTGGGAGCACCACATCAGAGTCATGCTGTGAAGCAGTCAGGCTTAGCTGCAGTATCTTGGTTGAGAGGTTAAAGCCTCTCAAGGAAAAGCTGAAGGCAGATACGGGCTCTATCAAATGGGAGACACTTATTCTTCAGGTAGCTACACTACAATACAGTGTCAGATCCTAATTTTGAATTTTGATAGATTTTCCTTCTGTGGAAGAAAGTTCCTTAATCATTCTAATTGTGAGATTAACATGAAGGAAGTGGTACTTTATCTGTTTTCTCTCTTCACGATCCATATGAGAAAACTACTTTTGTTTAATTTTCACTGTTGTCTGTAGAAAGTTCTAGAAACTTGTATTTTTAATTTCATAATGATGCATTTATCGTAGTTTCTATGATTGTGCCTGAGATATATCTTAGTAGCTGTAATTGTGCATGAGATACACTGGTTCAACCTTTTCCTGTTGAGGTCTTGTAGTATGTGGAAGGTGACACTTAGCATGTTCACAATTTATGGGAGAATTAACCCGTTTTAATCAGGAAAATATTCATGGACTAAATGTGGCAAAGGACTCGAGGGCAGATAATTATTTTCTTCTTTTGCTAGACCACAAACACAATTATTTAATTTTATGATGCTGACGATTTATCAATCTACAGGCGTACATGCAATCTGTGAACTTATCAGCATCTTCGTTTTACGTGCCCAACAATAACTCGATGATGTACCTCAATTATGGTGCCGCAGTAAGTGAGGTAATGTGTTTTCTTATATATGGCTTAAACCTTAATGGTATAAGTTCATTAAATTTTTTATTTTTTATGTTAAGTACTTAAATTGTCAGACGAGCCATATCACCGAAATAACTGAACTGTATTATTATATTCTGTCGTTCTAAATAATGGAAATTATTTTTCAGGTGGAAATAGATCTACTGACAGGAGAAACCAGATTTCTTCAAACTGATATCATCTATGATTGCGGACGGAGTCTCAACCCTGCTGTGGATTTAGGACAGGTATGCTAACTGCATATTTGCTTTACAAGCTCAACCATAATCAAGGACTATCTCAACATAAGAGTTGGAGGCCTACGAATATTTTTTTACTCCCTTTATTTCATAACTGATATTTGAGTCTTCCATTATTGTTTCAAAATTATTGATGTTTTAGAAATCCAATGTCTAATTAATACCTTCTCCCAACGATAACCTTAGTTGGGAAAAGGACATAATTTGTAATGCAATTGTAAATATTTACACTATTATAATTTATAAGGATATAATAGTAGATTAGATTTTTTTTTCTCTCCTCTCCCCTTGCAAACTAAACAAGAGGATTATTTCCATACTTTGAACCAAAGACTTTAAGGTAAATGCCCTAGGGATGAACTGGTTTGGTTTGTTTTCCTGAACCGCTAATACCAATATGATACCATCCTGCAGATTGAAGGAGCTTTTGTCCAGGGATTGGGGTTTTTCATGCTTGAAGAATATGAAACAGATCTTAATGGTTTGTCATTGGCAGACGGCACATGGAACTACAAAATCCCTACGATAGACACTATCCCTCAACAGTTTAATGTTCAAATTCTCAACAGTGGACATCACCAGCATCGTGTGCTTTCCTCTAAGGGTATGGATCAAGAAGTTCTTAAAATCCTGCCTATGCATTAAATTATGTCTTCATATTAGTCTTTTTTTTAGGTTCAGGCTCTTCTAAAGTGAGCAATTCACCGTAGAGTGTGAAGTTATCAACCATTAACTAACAAATCAATGGTGGATATTATGTACATGCGTAACAAATAATGAATGTGCTGTAATATCGACGCTTTATGTTTTACTTTAGACGAGTCAAACCATTTTTAATAGTTTTCCCTCATAATTCTATATCACTTGTACTTGAAATAGGGAGTTTAATAACAAAAACGAATTCCATTTATCTTGTTAACAGTATGGGAAAATGGGTTGTTTTGTTGGCTGTGACTTGTAAGCATGTAACAGCTCATGCTATTTTTGTGATTTAATGAGAATGCTTCATGTATTCTCAGTTTGAAATTCATAATTACAAAAATTAAAAGCTTCTCTCACTAAATGGAATTTGATAGTTTAAAATACTTAGTAGAAAAATTAAAATGAAATTTGTGTTGCAGCTTCTGGCGAGCCGCCCTTACTTCTAGCAACTTCAGTTCACTGTGCCACAAGAGCAGCTATTAAAGAAGCAAGGAAACAGCTTCTTTCATGGAGCAACTTGGATGAACGTGATTCAACATTTCAGTTGCGGGTTCCTGCAACCATGCCTGTGGTTAAGGAACTCATTGGACTGGACATTGTAGAAAGATACCTGAAATGGAAGATGAGCAGGGTGTAA
Protein sequence

>MS.gene39848.t1

MSMEVKKSEQNQTTSLIFCVNGEKFELSKVDPSTTLLQFLRTQTPFKSVKLGCGEGGCGACVVLISKYDPLVDRVEDFTANSCLTLLCSIHGCSITTSEGIGNSKQGLHPIHERFAGFHASQCGFCTPGMCVSLFGTLVNAEKKTNCQEPPSGFSKVTVSEAEKAIAGNLCRCTGYRPIADACKSFAADVDMEDLGLNSFWRKEESKDLQLSKLPRYEHQHKNVKFPMFLKEIKNDLFISSEKHGWHRPTSLKELQNLLELNHASDANGARIKVVVNNTGMGYYKDNDGYDKYIDLKGISELSKIRKDQSGIEIGAAVTISKAIEVLKQQSKSDFISDFVMILEKIADHMSKVASGFIRNTASVGGNLVLAQKSKFPSDIVTILLAVDSMVHIMNGTQFEWITLEEFLERPPLSLESVLLSIKIPSLETVKSTCSEQKNRFHFETYRASPRQLGNALPYLNAAFLVEVSPGENSGGSMIDACRLSFGACGNKHAIRAKTVEEFLIGKMLSVSVIYEAINLLTTTIVPKDENSKTAYRSSLAAGFVFQFFNPLVETTAGETNFDVNGYSNLPFVKDFAFKENQKQLHHDKTPTLLSSGNQVLEAGNEYHPVGKPIIKSGAALQATGEAVFVDDIPSPPNCLHGAFIYSEKPLARIRSIKLSPELRLNGLKDIISSKDIPSGGENIGAKTIFGIEPLFAEEIARCVGERLAFVVADSQKLADMAANSTVVDYDIENLEPPILSVEDAVKRSSFFEVPPFLYPKHVGDISKGMAEADHKILSAEVKLGSQYYFYMETQTALAVPDEDNCITVYSSSQCPEFTHSTIARCLGIPESNVRVITRRVGGGFGGKAIKAISTATSCALAAQKLCRPVRMYLNRKTDMIMAGGRHPMKITYNVGFKNDGKITALELEILINAGIYVDISAALPHNMVSTLKKYDWGALSFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIENVAATLSVDVDTIRSINLHTYKSLQSFYDHCYGEPFEYTLPSIWSKLAISANYEQRIEMVKEFNRISTWKKRGISRVPVAYQLTLRPTPGKVSILSDGFVVVEVGGIELGQGLWTKVKQMAAFSLGTIQCDETGSLLDKVRVVQADTVSLIQGGFTTGSTTSESCCEAVRLSCSILVERLKPLKEKLKADTGSIKWETLILQAYMQSVNLSASSFYVPNNNSMMYLNYGAAVSEVEIDLLTGETRFLQTDIIYDCGRSLNPAVDLGQIEGAFVQGLGFFMLEEYETDLNGLSLADGTWNYKIPTIDTIPQQFNVQILNSGHHQHRVLSSKASGEPPLLLATSVHCATRAAIKEARKQLLSWSNLDERDSTFQLRVPATMPVVKELIGLDIVERYLKWKMSRV