AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene39941

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene39941.t1 MTR_1g071370 97.199 1071 30 0 1 1071 1 1071 0.0 2184
MS.gene39941.t1 MTR_1g015110 33.478 230 98 7 226 446 368 551 2.37e-23 106
MS.gene39941.t1 MTR_3g104710 32.589 224 96 6 226 440 364 541 3.30e-23 105
MS.gene39941.t1 MTR_4g125810 31.897 232 96 8 225 442 324 507 7.25e-22 101
MS.gene39941.t1 MTR_3g068200 32.301 226 90 6 226 438 200 375 2.29e-21 98.2
MS.gene39941.t1 MTR_1g014640 28.740 254 123 6 183 436 126 321 3.17e-21 96.7
MS.gene39941.t1 MTR_1g013400 28.740 254 123 6 183 436 126 321 3.17e-21 96.7
MS.gene39941.t1 MTR_3g105730 27.953 254 125 6 183 436 61 256 3.53e-21 95.1
MS.gene39941.t1 MTR_5g009370 32.432 222 97 5 226 440 157 332 3.96e-21 96.3
MS.gene39941.t1 MTR_3g105730 27.953 254 125 6 183 436 83 278 7.45e-21 94.7
MS.gene39941.t1 MTR_1g028300 39.735 151 81 6 300 444 240 386 5.15e-20 94.0
MS.gene39941.t1 MTR_2g040500 25.389 386 195 15 72 440 228 537 6.09e-19 92.4
MS.gene39941.t1 MTR_8g102550 30.415 217 103 5 226 440 220 390 1.83e-18 89.4
MS.gene39941.t1 MTR_1g115570 29.958 237 104 9 200 436 161 335 1.50e-16 82.8
MS.gene39941.t1 MTR_3g464650 25.100 251 130 7 198 441 118 317 1.87e-16 82.0
MS.gene39941.t1 MTR_6g081850 24.540 326 153 8 71 396 51 283 1.12e-15 79.7
MS.gene39941.t1 MTR_3g091060 27.642 246 120 6 200 445 160 347 2.62e-15 79.3
MS.gene39941.t1 MTR_3g105880 24.934 377 184 13 42 404 5 296 1.28e-14 76.6
MS.gene39941.t1 MTR_5g071550 22.193 374 162 10 71 441 130 377 9.54e-14 74.7
MS.gene39941.t1 MTR_3g464700 38.983 118 67 3 275 392 186 298 1.72e-13 73.6
MS.gene39941.t1 MTR_5g071550 23.547 327 133 8 71 397 130 339 6.39e-13 72.0
MS.gene39941.t1 MTR_2g078760 28.241 216 94 9 226 439 177 333 5.92e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene39941.t1 AT3G63340 55.713 1059 408 15 24 1069 30 1040 0.0 1152
MS.gene39941.t1 AT3G63340 55.650 1062 403 17 24 1069 30 1039 0.0 1149
MS.gene39941.t1 AT3G63340 55.650 1062 403 17 24 1069 30 1039 0.0 1149
MS.gene39941.t1 AT3G63340 54.029 1092 408 16 24 1069 30 1073 0.0 1135
MS.gene39941.t1 AT3G63340 54.985 1033 397 17 24 1040 30 1010 0.0 1098
MS.gene39941.t1 AT3G63340 54.873 1026 395 17 24 1033 30 1003 0.0 1087
MS.gene39941.t1 AT3G63340 54.873 1026 395 17 24 1033 30 1003 0.0 1087
MS.gene39941.t1 AT3G63340 54.873 1026 395 17 24 1033 30 1003 0.0 1087
MS.gene39941.t1 AT3G63340 54.873 1026 395 17 24 1033 30 1003 0.0 1087
MS.gene39941.t1 AT3G63340 52.009 871 352 16 24 878 30 850 0.0 848
MS.gene39941.t1 AT3G63340 65.473 391 117 4 679 1069 2 374 5.35e-178 525
MS.gene39941.t1 AT3G63340 56.054 446 174 6 24 457 30 465 1.05e-162 491
MS.gene39941.t1 AT3G63320 57.265 351 126 4 90 440 56 382 2.32e-125 389
MS.gene39941.t1 AT3G63320 56.522 322 117 3 119 440 1 299 1.67e-112 353
MS.gene39941.t1 AT5G57050 32.296 257 113 8 200 442 166 375 2.68e-24 107
MS.gene39941.t1 AT5G57050 32.296 257 113 8 200 442 206 415 4.63e-24 107
MS.gene39941.t1 AT4G26080 30.888 259 115 8 196 439 214 423 2.64e-22 101
MS.gene39941.t1 AT1G72770 32.258 248 105 10 205 440 307 503 7.69e-22 101
MS.gene39941.t1 AT1G72770 32.258 248 105 10 205 440 307 503 7.69e-22 101
MS.gene39941.t1 AT1G72770 32.258 248 105 10 205 440 307 503 7.69e-22 101
MS.gene39941.t1 AT5G24940 31.381 239 102 8 200 436 99 277 8.03e-21 97.4
MS.gene39941.t1 AT4G31750 28.044 271 135 7 183 453 82 292 1.24e-20 94.4
MS.gene39941.t1 AT4G31750 28.044 271 135 7 183 453 82 292 1.96e-20 94.0
MS.gene39941.t1 AT4G31750 28.044 271 135 7 183 453 82 292 1.96e-20 94.0
MS.gene39941.t1 AT5G10740 29.958 237 108 6 200 436 99 277 3.43e-20 94.0
MS.gene39941.t1 AT5G10740 29.958 237 108 6 200 436 99 277 3.43e-20 94.0
MS.gene39941.t1 AT1G17550 31.278 227 95 8 226 440 326 503 8.15e-20 94.7
MS.gene39941.t1 AT1G17550 31.278 227 95 8 226 440 326 503 8.15e-20 94.7
MS.gene39941.t1 AT5G51760 33.043 230 94 6 225 440 200 383 8.37e-20 93.6
MS.gene39941.t1 AT5G51760 32.766 235 98 6 220 440 225 413 1.49e-19 93.2
MS.gene39941.t1 AT2G29380 32.883 222 89 7 226 438 190 360 1.67e-19 92.0
MS.gene39941.t1 AT5G59220 36.000 175 62 6 226 400 221 345 3.48e-19 92.0
MS.gene39941.t1 AT1G43900 28.333 240 113 6 200 439 189 369 8.86e-19 90.1
MS.gene39941.t1 AT1G07430 33.714 175 66 5 226 400 233 357 8.91e-18 87.8
MS.gene39941.t1 AT1G07160 21.196 368 170 8 71 438 129 376 1.61e-17 86.3
MS.gene39941.t1 AT3G11410 34.286 175 65 5 226 400 221 345 1.96e-16 83.2
MS.gene39941.t1 AT2G34740 29.583 240 105 8 200 436 154 332 9.21e-15 77.4
MS.gene39941.t1 AT2G30020 31.250 144 85 4 301 441 263 395 1.19e-14 77.8
MS.gene39941.t1 AT2G40180 25.820 244 124 8 199 441 201 388 1.41e-14 77.4
MS.gene39941.t1 AT1G67820 30.570 193 81 5 196 388 153 292 6.39e-14 75.5
MS.gene39941.t1 AT1G67820 30.412 194 82 5 196 389 189 329 8.83e-14 75.5
MS.gene39941.t1 AT4G28400 26.512 215 97 7 226 438 105 260 4.41e-12 68.2
MS.gene39941.t1 AT4G28400 26.512 215 97 7 226 438 127 282 6.88e-12 67.8
MS.gene39941.t1 AT1G03590 26.601 203 101 4 200 393 159 322 6.52e-11 66.6
MS.gene39941.t1 AT1G34750 29.767 215 90 9 226 438 126 281 7.36e-11 64.7
MS.gene39941.t1 AT1G34750 29.767 215 90 9 226 438 126 281 7.36e-11 64.7
MS.gene39941.t1 AT1G34750 29.767 215 90 9 226 438 126 281 7.36e-11 64.7

Find 246 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTAATCCCTGGGGTTTC+TGG 0.128881 1.4:+58432102 MS.gene39941:CDS
CTCCTGCACAATTATCTTCT+TGG 0.150542 1.4:-58433800 None:intergenic
GCTAGAGATCCTCTTAAAAT+AGG 0.177908 1.4:+58433184 MS.gene39941:CDS
GCATTTATCTGGAAAATATT+TGG 0.181104 1.4:-58431654 None:intergenic
GATGCAGGTTTCCCATTATT+TGG 0.222783 1.4:+58423253 MS.gene39941:CDS
ATGCTTCTACTGGGCCTTCT+AGG 0.241354 1.4:+58431269 MS.gene39941:CDS
GTTCAAACCTTCTTCATATA+TGG 0.241764 1.4:-58428045 None:intergenic
TCTTGGTGGAGGTTGGAAAT+AGG 0.242007 1.4:-58433783 None:intergenic
ATTAGGTGCAATGGGGATTA+AGG 0.266498 1.4:+58421077 MS.gene39941:intron
GAAGTGAAACATGGTGATTT+TGG 0.270964 1.4:+58425055 MS.gene39941:CDS
GGTTGCAGATGATAAAATTT+TGG 0.273866 1.4:+58422090 MS.gene39941:CDS
ATCAGAAAATCTTGGTGATT+TGG 0.274395 1.4:+58425090 MS.gene39941:CDS
ATCCCTAGTCAATTCCTTTA+CGG 0.281821 1.4:-58422490 None:intergenic
AGGAAATGCGCAACCTTATC+TGG 0.283971 1.4:+58428282 MS.gene39941:CDS
CTGGTGGTCAAGTTCTAAAT+TGG 0.286126 1.4:+58422556 MS.gene39941:CDS
AACCAACGCCACCACTTTGA+TGG 0.287978 1.4:-58428236 None:intergenic
GTGATGTTAGAGATGGTCTT+AGG 0.291313 1.4:+58431627 MS.gene39941:CDS
TCAATTCCTTTACATGATAC+TGG 0.307213 1.4:+58425463 MS.gene39941:CDS
GGCGGTTTGCCTCGCGTAAA+TGG 0.311764 1.4:+58422579 MS.gene39941:CDS
TTGGCGACGTGTTCTTTAAA+AGG 0.312314 1.4:+58422625 MS.gene39941:CDS
CCTCTTTATTAAAGCTATAT+AGG 0.315202 1.4:+58422385 MS.gene39941:CDS
TGGTCGTTGTACAAAATTAC+AGG 0.316460 1.4:-58425346 None:intergenic
CTTGGTGGAGGTTGGAAATA+GGG 0.316685 1.4:-58433782 None:intergenic
TTTCAGACATCTGGGCTTTA+CGG 0.320626 1.4:+58433312 MS.gene39941:CDS
TTGCTCAAGTCTTTCGTTCT+CGG 0.321277 1.4:-58428189 None:intergenic
AACTTGGTATCTGGCAGATT+AGG 0.330954 1.4:-58424437 None:intergenic
ATTCCACATATCTTGCAATA+TGG 0.333093 1.4:-58428067 None:intergenic
ATTCGCTTAAACTTGGTATC+TGG 0.334439 1.4:-58424446 None:intergenic
AGTCCCGGTCCAATGAAATA+TGG 0.334535 1.4:+58428096 MS.gene39941:CDS
TACTTCAAAGTTGAGCTTGA+TGG 0.339445 1.4:-58431451 None:intergenic
AAGCATTTATATGCTTCTAC+TGG 0.351239 1.4:+58431259 MS.gene39941:CDS
ATAAAACTGGCAAAGCCTTC+AGG 0.357027 1.4:-58425427 None:intergenic
ACTTGGTATCTGGCAGATTA+GGG 0.357697 1.4:-58424436 None:intergenic
GGCTGCCAATCAGTCACTTC+TGG 0.361010 1.4:-58422956 None:intergenic
AGATAAATTTACCTTGAATC+AGG 0.361118 1.4:-58425517 None:intergenic
GATTCCTGCAGACCAAATAA+TGG 0.365171 1.4:-58423265 None:intergenic
TAGCTATCGTTAGCAGTTAG+AGG 0.367958 1.4:-58422977 None:intergenic
AAAGGGCAGTATGGACAATA+TGG 0.370563 1.4:+58423156 MS.gene39941:CDS
ATAAATAGTTTACCGGGAAA+TGG 0.373233 1.4:-58420777 None:intergenic
CACGTGTTAAAGCATTTATC+TGG 0.375022 1.4:-58431665 None:intergenic
AGGATTTATGCATTGGTCAT+TGG 0.376552 1.4:-58425407 None:intergenic
TGGTGGTCAAGTTCTAAATT+GGG 0.378816 1.4:+58422557 MS.gene39941:CDS
GATCTTCGCATTCCATTTCC+CGG 0.384363 1.4:+58420765 MS.gene39941:CDS
AAGCACTTCTTCATCGCGTT+AGG 0.394880 1.4:+58420519 MS.gene39941:CDS
TCAGGTGAAAACAGAAGTTT+TGG 0.396522 1.4:-58425366 None:intergenic
CACAATTATCTTCTTGGTGG+AGG 0.397522 1.4:-58433794 None:intergenic
GGAAGTTGTGGTTGGGATTG+TGG 0.398144 1.4:+58421098 MS.gene39941:CDS
ATTATTCAATGCCTGATTCA+AGG 0.401088 1.4:+58425506 MS.gene39941:CDS
TAGTGCGCCATCTGCTTATG+TGG 0.402017 1.4:+58433336 MS.gene39941:CDS
TACCAAGTTTAAGCGAATAA+TGG 0.403865 1.4:+58424451 MS.gene39941:CDS
ATGATACTGGTTCAGATAAC+AGG 0.403949 1.4:+58425476 MS.gene39941:CDS
AGCCTTGGAGTCTCCAATAT+TGG 0.405985 1.4:-58422116 None:intergenic
TCTAGGAATAACCTTCATTC+AGG 0.406387 1.4:+58422046 MS.gene39941:CDS
TGCTTTGAAGATCCAGAGTC+AGG 0.410523 1.4:+58429876 MS.gene39941:CDS
GGCAGCAGTTGTTGTTCCTC+TGG 0.410760 1.4:+58423177 MS.gene39941:CDS
CGTATTATTGACTTTGGAAG+TGG 0.414780 1.4:+58431217 MS.gene39941:CDS
TATGTATTAAAGAGGAGTTT+TGG 0.415898 1.4:+58425779 MS.gene39941:CDS
GTAGCATTTAGCAAAGCTTC+AGG 0.416085 1.4:-58431415 None:intergenic
ATCTACAGCAACAGTTGTAT+TGG 0.416406 1.4:+58422069 MS.gene39941:CDS
TCGACAGGAACATTGCTTCA+TGG 0.419963 1.4:+58421243 MS.gene39941:CDS
CTCAAGTAATCCTGAGTGTC+AGG 0.422575 1.4:+58425904 MS.gene39941:CDS
TTCAAGAAGACCAATAAAAC+TGG 0.423014 1.4:-58425440 None:intergenic
TTTCCCATTATTTGGTCTGC+AGG 0.423374 1.4:+58423261 MS.gene39941:CDS
GTTCTTTCATCCTCTCTGTC+TGG 0.423470 1.4:-58422519 None:intergenic
CTAGAGATCCTCTTAAAATA+GGG 0.423911 1.4:+58433185 MS.gene39941:CDS
CATAGACGGAAAGAGATGTT+AGG 0.425807 1.4:+58421294 MS.gene39941:CDS
CGGCAAAATTAGTGAGCCCT+TGG 0.426084 1.4:-58422470 None:intergenic
GAATACAAGCCATATTTCAT+TGG 0.428140 1.4:-58428105 None:intergenic
TTGGCTATAACACGGGCTAT+TGG 0.432011 1.4:+58422606 MS.gene39941:CDS
GAATTCTTCAGAGCATTTCC+AGG 0.434830 1.4:-58433143 None:intergenic
AAGACTTGAGCAAGTGAAAC+AGG 0.436937 1.4:+58428199 MS.gene39941:CDS
GATGTTTGATTAGGTGCAAT+GGG 0.439760 1.4:+58421069 MS.gene39941:intron
TACCATTATTCGCTTAAACT+TGG 0.442960 1.4:-58424453 None:intergenic
CTGCACAATTATCTTCTTGG+TGG 0.445189 1.4:-58433797 None:intergenic
CGACAGGAACATTGCTTCAT+GGG 0.445851 1.4:+58421244 MS.gene39941:CDS
AGCCTTCAGGATTTATGCAT+TGG 0.450173 1.4:-58425414 None:intergenic
TGTAGGCGTATTATTGACTT+TGG 0.450655 1.4:+58431211 MS.gene39941:intron
GTGGATCATATGGTGAAGTA+TGG 0.450731 1.4:+58425804 MS.gene39941:CDS
AGCGCCACCGTGTTTGTAAA+CGG 0.454314 1.4:-58420601 None:intergenic
TTTGAAGATGTGCTGTTGGC+TGG 0.454563 1.4:+58427945 MS.gene39941:CDS
CGCAATGCCTCGTCAACACT+TGG 0.455029 1.4:-58433755 None:intergenic
TTCAAGCATCTCCCTGACTC+TGG 0.456959 1.4:-58429888 None:intergenic
ATTATCTTCTTGGTGGAGGT+TGG 0.459012 1.4:-58433790 None:intergenic
TCAGAGCATTTCCAGGATGC+AGG 0.459218 1.4:-58433136 None:intergenic
ATGTACAGGGTGTAGTTAGA+AGG 0.459269 1.4:-58425932 None:intergenic
ATTCCTGCAGACCAAATAAT+GGG 0.461614 1.4:-58423264 None:intergenic
TTCTCACCTTTAGCCTCCTT+AGG 0.462469 1.4:-58422166 None:intergenic
CTGGCAGATTAGGGTGCTCC+AGG 0.462532 1.4:-58424427 None:intergenic
GCTTGTTGATGAAGGGCATC+TGG 0.462663 1.4:-58425181 None:intergenic
GCTTACCAGCTTGTTGATGA+AGG 0.463639 1.4:-58425189 None:intergenic
GGGATTAAGGAAGTTGTGGT+TGG 0.467601 1.4:+58421090 MS.gene39941:CDS
CCTATATAGCTTTAATAAAG+AGG 0.469166 1.4:-58422385 None:intergenic
CTGTGTACTTGAGTGGGCTG+AGG 0.472285 1.4:+58427880 MS.gene39941:CDS
AGAAAATCTTGGTGATTTGG+TGG 0.474744 1.4:+58425093 MS.gene39941:CDS
CTGATCTCATGTCACATAAA+CGG 0.475305 1.4:-58423075 None:intergenic
GCGCAACCTTATCTGGCAAC+TGG 0.476012 1.4:+58428289 MS.gene39941:CDS
GATGGCGTCAAAATTATTGA+TGG 0.476159 1.4:+58421158 MS.gene39941:CDS
CGACAGACTTAGATCGTTCA+TGG 0.476521 1.4:+58432071 MS.gene39941:intron
GGTTAAGCATGTGGATGATT+CGG 0.477227 1.4:-58420580 None:intergenic
GAAGGGCATCTGGTATAGGC+TGG 0.481769 1.4:-58425171 None:intergenic
AACTGCTAACGATAGCTACT+TGG 0.481960 1.4:+58422982 MS.gene39941:CDS
GAATTGTGCATCTTAATCCC+TGG 0.482370 1.4:+58432093 MS.gene39941:CDS
TGATGAAGGGCATCTGGTAT+AGG 0.485113 1.4:-58425175 None:intergenic
TTGGAGTTTCGCCTGCATCC+TGG 0.489711 1.4:+58433125 MS.gene39941:CDS
AATTGTGCATCTTAATCCCT+GGG 0.493692 1.4:+58432094 MS.gene39941:CDS
GCATCTTGAGGGCTGGAATG+AGG 0.494687 1.4:+58431701 MS.gene39941:CDS
AGCACTTCTTCATCGCGTTA+GGG 0.496565 1.4:+58420520 MS.gene39941:CDS
TTCAGAGCACAAGAAAGCCT+TGG 0.496817 1.4:-58422131 None:intergenic
TGGCTTGTATTCAGTTATGA+AGG 0.497253 1.4:+58428116 MS.gene39941:CDS
CTGCACCAGAAGTGACTGAT+TGG 0.497735 1.4:+58422951 MS.gene39941:CDS
GAACCATATTGCAAGATATG+TGG 0.497814 1.4:+58428064 MS.gene39941:CDS
GACATACCAGTTGCCAGATA+AGG 0.499331 1.4:-58428295 None:intergenic
TACTTGGTGGCTGCATCTGA+TGG 0.499430 1.4:+58422998 MS.gene39941:CDS
GAATCTGCTTACAGAAGCTC+AGG 0.499613 1.4:+58423283 MS.gene39941:CDS
TTATACGTTTCAAAATGTAC+AGG 0.500478 1.4:-58425946 None:intergenic
CACCTCTGATCGATTGCACC+TGG 0.502161 1.4:+58424409 MS.gene39941:CDS
TGATGTTAGAGATGGTCTTA+GGG 0.503989 1.4:+58431628 MS.gene39941:CDS
TGTACTGAACAGGTAGAGAA+AGG 0.507240 1.4:+58427852 MS.gene39941:intron
TGGTTGAAAACAACAGAAGA+AGG 0.507783 1.4:+58428254 MS.gene39941:CDS
GGATTAAGGAAGTTGTGGTT+GGG 0.510198 1.4:+58421091 MS.gene39941:CDS
CATCTTGAGGGCTGGAATGA+GGG 0.512226 1.4:+58431702 MS.gene39941:CDS
TGGTCAGTTGGCTATAACAC+GGG 0.512647 1.4:+58422599 MS.gene39941:CDS
GAGTAGCTGCCAGAAACCCC+AGG 0.513588 1.4:-58432111 None:intergenic
CTTCATTGATAGTTGAACTC+AGG 0.513812 1.4:-58425384 None:intergenic
AGGGGATTGTTGCGGAGAGG+AGG 0.515331 1.4:-58420548 None:intergenic
TAGATCGGCATCTTGAGGGC+TGG 0.519946 1.4:+58431694 MS.gene39941:CDS
GTGCTTTGAAGATGTGCTGT+TGG 0.522383 1.4:+58427941 MS.gene39941:CDS
TTACAAACACGGTGGCGCTC+CGG 0.522526 1.4:+58420605 MS.gene39941:CDS
TGCGGAGTGGCAACGAGTGG+TGG 0.524470 1.4:-58420691 None:intergenic
CAGTCTCCTAAGGAGGCTAA+AGG 0.524953 1.4:+58422160 MS.gene39941:CDS
GTCCATCAAAGTGGTGGCGT+TGG 0.525148 1.4:+58428234 MS.gene39941:CDS
CAAAACAAATTTCGACTGCA+AGG 0.529137 1.4:+58428020 MS.gene39941:CDS
TTGCCGTAAAGGAATTGACT+AGG 0.531885 1.4:+58422487 MS.gene39941:CDS
GCCTCGCGTAAATGGTCAGT+TGG 0.533001 1.4:+58422587 MS.gene39941:CDS
TTGAGCAAGTGAAACAGGTT+CGG 0.533800 1.4:+58428204 MS.gene39941:CDS
CTTACCAGCTTGTTGATGAA+GGG 0.534667 1.4:-58425188 None:intergenic
GTGATTTGGTGGATTCTAAG+TGG 0.534844 1.4:+58425104 MS.gene39941:CDS
TGATGTTTGATTAGGTGCAA+TGG 0.535874 1.4:+58421068 MS.gene39941:intron
TGCTTAACCGTTTACAAACA+CGG 0.536233 1.4:+58420594 MS.gene39941:CDS
TGCCGTAAAGGAATTGACTA+GGG 0.538228 1.4:+58422488 MS.gene39941:CDS
TGAGCAATAAGATACCTAGA+AGG 0.538448 1.4:-58431283 None:intergenic
AAACTATGAAGGAAGCCTCT+AGG 0.538727 1.4:+58422029 MS.gene39941:intron
GGCAAAATTAGTGAGCCCTT+GGG 0.540691 1.4:-58422469 None:intergenic
AAGGGCATCTGGTATAGGCT+GGG 0.541611 1.4:-58425170 None:intergenic
TACAGATTAGCTTCTTCCCA+AGG 0.542089 1.4:+58422453 MS.gene39941:CDS
AGAACTCGTGTGGAAGCTGC+TGG 0.542286 1.4:+58422537 MS.gene39941:CDS
TGGCAACGAGTGGTGGATTG+AGG 0.546080 1.4:-58420684 None:intergenic
TGATGGTTCTGTTTCTGTGT+GGG 0.546242 1.4:+58422419 MS.gene39941:CDS
CAAGCCATATTTCATTGGAC+CGG 0.546801 1.4:-58428100 None:intergenic
ATCATATGGTGAAGTATGGT+TGG 0.546846 1.4:+58425808 MS.gene39941:CDS
TTTGGGGATTGGAACACCGC+CGG 0.552404 1.4:-58420624 None:intergenic
TCTGAACCAGTATCATGTAA+AGG 0.554413 1.4:-58425469 None:intergenic
CCATCTGCTTATGTGGGACC+CGG 0.555390 1.4:+58433343 MS.gene39941:CDS
AGATGTCTGTGATTTGTTGT+GGG 0.556957 1.4:+58423045 MS.gene39941:CDS
ATGTAAACGTATTGCATAGA+CGG 0.557005 1.4:+58421280 MS.gene39941:CDS
TGCTAACGATAGCTACTTGG+TGG 0.559456 1.4:+58422985 MS.gene39941:CDS
AAGAAGCTACACTGAAAATG+AGG 0.560177 1.4:+58423231 MS.gene39941:CDS
AAGATGTCTGTGATTTGTTG+TGG 0.560429 1.4:+58423044 MS.gene39941:CDS
GTTATATCGAAAGCTTCGAC+AGG 0.561902 1.4:+58421228 MS.gene39941:CDS
TACACTGAAAATGAGGATGC+AGG 0.562709 1.4:+58423238 MS.gene39941:CDS
CAAGGAGCCATATATGAAGA+AGG 0.563211 1.4:+58428038 MS.gene39941:CDS
CAGCACATCTTCAAAGCACA+TGG 0.569088 1.4:-58427937 None:intergenic
TCGATCAGAGGTGATACCAT+TGG 0.570089 1.4:-58424399 None:intergenic
GTACTGAACAGGTAGAGAAA+GGG 0.572856 1.4:+58427853 MS.gene39941:intron
TGCCAATATTGGAGACTCCA+AGG 0.573506 1.4:+58422114 MS.gene39941:CDS
GATGATTCGGCGTGAGTGAA+GGG 0.573961 1.4:-58420567 None:intergenic
CAAACACGGTGGCGCTCCGG+CGG 0.574240 1.4:+58420608 MS.gene39941:CDS
TGGTGTTGTGATGTTAGAGA+TGG 0.574267 1.4:+58431620 MS.gene39941:CDS
TATCCCTATGTGTGATATTG+CGG 0.574507 1.4:-58429300 None:intergenic
GAATGAGGGTGTGAAGGAGC+TGG 0.574520 1.4:+58431716 MS.gene39941:CDS
GGGTCTGCTGTGTACTTGAG+TGG 0.575503 1.4:+58427873 MS.gene39941:CDS
GGTCTGCTGTGTACTTGAGT+GGG 0.575913 1.4:+58427874 MS.gene39941:CDS
TGCCACTCCGCAATGCTCCA+AGG 0.577663 1.4:+58420702 MS.gene39941:CDS
GTGATCGAAGAGGTTCCAGC+GGG 0.578336 1.4:-58420652 None:intergenic
CGACCGCAATATCACACATA+GGG 0.583887 1.4:+58429297 MS.gene39941:CDS
TGTGCAGGTATGTATTAAAG+AGG 0.587658 1.4:+58425771 MS.gene39941:intron
AAGCCATATTTCATTGGACC+GGG 0.588357 1.4:-58428099 None:intergenic
GACGGAAAGAGATGTTAGGT+TGG 0.594701 1.4:+58421298 MS.gene39941:CDS
AAGCTTTGCTAAATGCTACA+TGG 0.595339 1.4:+58431419 MS.gene39941:CDS
ACAGATTAGCTTCTTCCCAA+GGG 0.596152 1.4:+58422454 MS.gene39941:CDS
AACAACAGAAGAAGGGCAAG+AGG 0.596199 1.4:+58428262 MS.gene39941:CDS
TTTCATTGGAATTGTAACCA+AGG 0.599457 1.4:+58425833 MS.gene39941:CDS
GGTGGTCAAGTTCTAAATTG+GGG 0.601878 1.4:+58422558 MS.gene39941:CDS
TGAAGGGGATTGTTGCGGAG+AGG 0.603256 1.4:-58420551 None:intergenic
GACCAATGCATAAATCCTGA+AGG 0.603749 1.4:+58425412 MS.gene39941:CDS
CTAAATGCTACATGGTATCG+AGG 0.604297 1.4:+58431427 MS.gene39941:CDS
AGTGCGCCATCTGCTTATGT+GGG 0.605908 1.4:+58433337 MS.gene39941:CDS
GATGCCCTTCATCAACAAGC+TGG 0.609006 1.4:+58425184 MS.gene39941:CDS
CCGGGTCCCACATAAGCAGA+TGG 0.610347 1.4:-58433343 None:intergenic
GAAGGACCATCCTGACACTC+AGG 0.611190 1.4:-58425914 None:intergenic
AGGGCATCTGGTATAGGCTG+GGG 0.612492 1.4:-58425169 None:intergenic
ACGACCGCAATATCACACAT+AGG 0.615084 1.4:+58429296 MS.gene39941:CDS
TAATGAATAAGAAGATGAAG+AGG 0.616048 1.4:-58423104 None:intergenic
AGCATTTATATGCTTCTACT+GGG 0.617258 1.4:+58431260 MS.gene39941:CDS
TCTTCGACCTTGGAGCATTG+CGG 0.617385 1.4:-58420709 None:intergenic
CTCCAGGTGCAATCGATCAG+AGG 0.618244 1.4:-58424411 None:intergenic
TTTGTAAACGGTTAAGCATG+TGG 0.619327 1.4:-58420589 None:intergenic
AGTAATCCTGAGTGTCAGGA+TGG 0.619635 1.4:+58425908 MS.gene39941:CDS
AGAGGATGAAAGAACTCGTG+TGG 0.621867 1.4:+58422527 MS.gene39941:CDS
GGTCGTTGTACAAAATTACA+GGG 0.623669 1.4:-58425345 None:intergenic
TGTGTACTTGAGTGGGCTGA+GGG 0.625133 1.4:+58427881 MS.gene39941:CDS
CGGTGCGGAAGCTAGTGAGA+TGG 0.625186 1.4:+58421140 MS.gene39941:CDS
GGATGATTCGGCGTGAGTGA+AGG 0.625250 1.4:-58420568 None:intergenic
AGGTCGAAGAAAATCTCAAG+AGG 0.625421 1.4:+58420722 MS.gene39941:CDS
GGGCTGGAATGAGGGTGTGA+AGG 0.627190 1.4:+58431710 MS.gene39941:CDS
TTGCTGTAGATCCTGAATGA+AGG 0.628923 1.4:-58422057 None:intergenic
GGTTGAAAACAACAGAAGAA+GGG 0.630216 1.4:+58428255 MS.gene39941:CDS
ACACATAGGGATATTAAACC+TGG 0.631661 1.4:+58429310 MS.gene39941:CDS
ATGATTCGGCGTGAGTGAAG+GGG 0.632437 1.4:-58420566 None:intergenic
GATCGAAGAGGTTCCAGCGG+GGG 0.633018 1.4:-58420650 None:intergenic
AATGGGGATTAAGGAAGTTG+TGG 0.634124 1.4:+58421086 MS.gene39941:CDS
AGTTGTGGTTGGGATTGTGG+CGG 0.635560 1.4:+58421101 MS.gene39941:CDS
GCTATTACAGGTATGACATG+TGG 0.637987 1.4:+58431592 MS.gene39941:intron
CATTGCGGAGTGGCAACGAG+TGG 0.639290 1.4:-58420694 None:intergenic
TGAATGAAGGTTATTCCTAG+AGG 0.639688 1.4:-58422044 None:intergenic
GCTTTGAAGATCCAGAGTCA+GGG 0.642490 1.4:+58429877 MS.gene39941:CDS
TGAATGAACTGCATTCTGAA+AGG 0.646082 1.4:+58421325 MS.gene39941:CDS
GTGAGTGAAGGGGATTGTTG+CGG 0.646562 1.4:-58420556 None:intergenic
ATTGTGCATCTTAATCCCTG+GGG 0.647262 1.4:+58432095 MS.gene39941:CDS
AGTAGCTGCCAGAAACCCCA+GGG 0.648173 1.4:-58432110 None:intergenic
GACCTTGGAGCATTGCGGAG+TGG 0.648976 1.4:-58420704 None:intergenic
AGGTATGACATGTGGAGTGT+TGG 0.649398 1.4:+58431600 MS.gene39941:intron
ATGGTCAGTTGGCTATAACA+CGG 0.652150 1.4:+58422598 MS.gene39941:CDS
TGATAGGTTGAAGTGAAACA+TGG 0.652421 1.4:+58425046 MS.gene39941:intron
GGTCAAGTTCTAAATTGGGG+CGG 0.652501 1.4:+58422561 MS.gene39941:CDS
TACTACGTCCATCAAAGTGG+TGG 0.655382 1.4:+58428228 MS.gene39941:CDS
GAAGATTTGAAAGATTCCAG+AGG 0.656765 1.4:-58423193 None:intergenic
TAAATGCTACATGGTATCGA+GGG 0.656851 1.4:+58431428 MS.gene39941:CDS
GCATTTAGCAAAGCTTCAGG+AGG 0.661051 1.4:-58431412 None:intergenic
GTGATGGTTCTGTTTCTGTG+TGG 0.661246 1.4:+58422418 MS.gene39941:CDS
GGATCGGCCAAGTGTTGACG+AGG 0.662296 1.4:+58433748 MS.gene39941:CDS
GGATACTACGTCCATCAAAG+TGG 0.662788 1.4:+58428225 MS.gene39941:CDS
TATACGTTTCAAAATGTACA+GGG 0.664830 1.4:-58425945 None:intergenic
TATAGGCAGACAGAGCGTGA+TGG 0.668590 1.4:+58422402 MS.gene39941:CDS
GACGAGAATTGTGATCGAAG+AGG 0.668622 1.4:-58420662 None:intergenic
TGTGATCGAAGAGGTTCCAG+CGG 0.668743 1.4:-58420653 None:intergenic
ACTCGTGTGGAAGCTGCTGG+TGG 0.671105 1.4:+58422540 MS.gene39941:CDS
GCCAACTGACCATTTACGCG+AGG 0.686631 1.4:-58422588 None:intergenic
ATGTTTGATTAGGTGCAATG+GGG 0.693914 1.4:+58421070 MS.gene39941:intron
GGATCATCATCCAGACAGAG+AGG 0.695616 1.4:+58422509 MS.gene39941:CDS
GAAATGGAATGCGAAGATCG+AGG 0.704163 1.4:-58420761 None:intergenic
TTTCGATGGTCATAACGGTG+CGG 0.715714 1.4:+58421125 MS.gene39941:CDS
CACATCTTCAAAGCACATGG+AGG 0.716246 1.4:-58427934 None:intergenic
CAAGTGTTGACGAGGCATTG+CGG 0.724863 1.4:+58433756 MS.gene39941:CDS
TGATCGAAGAGGTTCCAGCG+GGG 0.731401 1.4:-58420651 None:intergenic
TTAACCGTTTACAAACACGG+TGG 0.787662 1.4:+58420597 MS.gene39941:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr1.4 gene 58420510 58433811 58420510 ID=MS.gene39941
chr1.4 mRNA 58420510 58433811 58420510 ID=MS.gene39941.t1;Parent=MS.gene39941
chr1.4 exon 58420510 58420786 58420510 ID=MS.gene39941.t1.exon1;Parent=MS.gene39941.t1
chr1.4 CDS 58420510 58420786 58420510 ID=cds.MS.gene39941.t1;Parent=MS.gene39941.t1
chr1.4 exon 58421082 58421346 58421082 ID=MS.gene39941.t1.exon2;Parent=MS.gene39941.t1
chr1.4 CDS 58421082 58421346 58421082 ID=cds.MS.gene39941.t1;Parent=MS.gene39941.t1
chr1.4 exon 58421840 58421945 58421840 ID=MS.gene39941.t1.exon3;Parent=MS.gene39941.t1
chr1.4 CDS 58421840 58421945 58421840 ID=cds.MS.gene39941.t1;Parent=MS.gene39941.t1
chr1.4 exon 58422040 58422181 58422040 ID=MS.gene39941.t1.exon4;Parent=MS.gene39941.t1
chr1.4 CDS 58422040 58422181 58422040 ID=cds.MS.gene39941.t1;Parent=MS.gene39941.t1
chr1.4 exon 58422385 58422646 58422385 ID=MS.gene39941.t1.exon5;Parent=MS.gene39941.t1
chr1.4 CDS 58422385 58422646 58422385 ID=cds.MS.gene39941.t1;Parent=MS.gene39941.t1
chr1.4 exon 58422937 58423304 58422937 ID=MS.gene39941.t1.exon6;Parent=MS.gene39941.t1
chr1.4 CDS 58422937 58423304 58422937 ID=cds.MS.gene39941.t1;Parent=MS.gene39941.t1
chr1.4 exon 58424399 58424472 58424399 ID=MS.gene39941.t1.exon7;Parent=MS.gene39941.t1
chr1.4 CDS 58424399 58424472 58424399 ID=cds.MS.gene39941.t1;Parent=MS.gene39941.t1
chr1.4 exon 58425052 58425205 58425052 ID=MS.gene39941.t1.exon8;Parent=MS.gene39941.t1
chr1.4 CDS 58425052 58425205 58425052 ID=cds.MS.gene39941.t1;Parent=MS.gene39941.t1
chr1.4 exon 58425335 58425527 58425335 ID=MS.gene39941.t1.exon9;Parent=MS.gene39941.t1
chr1.4 CDS 58425335 58425527 58425335 ID=cds.MS.gene39941.t1;Parent=MS.gene39941.t1
chr1.4 exon 58425778 58425970 58425778 ID=MS.gene39941.t1.exon10;Parent=MS.gene39941.t1
chr1.4 CDS 58425778 58425970 58425778 ID=cds.MS.gene39941.t1;Parent=MS.gene39941.t1
chr1.4 exon 58427864 58428310 58427864 ID=MS.gene39941.t1.exon11;Parent=MS.gene39941.t1
chr1.4 CDS 58427864 58428310 58427864 ID=cds.MS.gene39941.t1;Parent=MS.gene39941.t1
chr1.4 exon 58429274 58429331 58429274 ID=MS.gene39941.t1.exon12;Parent=MS.gene39941.t1
chr1.4 CDS 58429274 58429331 58429274 ID=cds.MS.gene39941.t1;Parent=MS.gene39941.t1
chr1.4 exon 58429862 58429949 58429862 ID=MS.gene39941.t1.exon13;Parent=MS.gene39941.t1
chr1.4 CDS 58429862 58429949 58429862 ID=cds.MS.gene39941.t1;Parent=MS.gene39941.t1
chr1.4 exon 58431216 58431290 58431216 ID=MS.gene39941.t1.exon14;Parent=MS.gene39941.t1
chr1.4 CDS 58431216 58431290 58431216 ID=cds.MS.gene39941.t1;Parent=MS.gene39941.t1
chr1.4 exon 58431387 58431470 58431387 ID=MS.gene39941.t1.exon15;Parent=MS.gene39941.t1
chr1.4 CDS 58431387 58431470 58431387 ID=cds.MS.gene39941.t1;Parent=MS.gene39941.t1
chr1.4 exon 58431602 58431745 58431602 ID=MS.gene39941.t1.exon16;Parent=MS.gene39941.t1
chr1.4 CDS 58431602 58431745 58431602 ID=cds.MS.gene39941.t1;Parent=MS.gene39941.t1
chr1.4 exon 58432077 58432158 58432077 ID=MS.gene39941.t1.exon17;Parent=MS.gene39941.t1
chr1.4 CDS 58432077 58432158 58432077 ID=cds.MS.gene39941.t1;Parent=MS.gene39941.t1
chr1.4 exon 58433124 58433206 58433124 ID=MS.gene39941.t1.exon18;Parent=MS.gene39941.t1
chr1.4 CDS 58433124 58433206 58433124 ID=cds.MS.gene39941.t1;Parent=MS.gene39941.t1
chr1.4 exon 58433310 58433364 58433310 ID=MS.gene39941.t1.exon19;Parent=MS.gene39941.t1
chr1.4 CDS 58433310 58433364 58433310 ID=cds.MS.gene39941.t1;Parent=MS.gene39941.t1
chr1.4 exon 58433746 58433811 58433746 ID=MS.gene39941.t1.exon20;Parent=MS.gene39941.t1
chr1.4 CDS 58433746 58433811 58433746 ID=cds.MS.gene39941.t1;Parent=MS.gene39941.t1
Gene Sequence

>MS.gene39941

ATGATTAGAAAGCACTTCTTCATCGCGTTAGGGTTTCTCCTCCTCTCCGCAACAATCCCCTTCACTCACGCCGAATCATCCACATGCTTAACCGTTTACAAACACGGTGGCGCTCCGGCGGTGTTCCAATCCCCAAAATGCCCCCGCTGGAACCTCTTCGATCACAATTCTCGTCCTCAATCCACCACTCGTTGCCACTCCGCAATGCTCCAAGGTCGAAGAAAATCTCAAGAGGATCGCACTCTCTGCGTCCTCGATCTTCGCATTCCATTTCCCGGTAAACTATTTATTTGACGTAATAGTTAATTACAGTAATTAGTTATAGTTAAGTTTCATCGGAAGAGTTAGTTACAATAATTCGTCATAGTAATTAGACAAGTTTCATAATATAGTTAATTACAATAATCAGTTACACTAGTTAGTTGAGTTTCATTGGAAGAGTTAGTTACAATAATTAATTACTGTAATTAGATAAATTTCACAATAATTAGTTACAATAATTAGTTACAGTGGTTAGTTAAGTTTTGTTCGCAAGAGTTAGTTATAATTTTATGTGTTTGATGTTTGATTAGGTGCAATGGGGATTAAGGAAGTTGTGGTTGGGATTGTGGCGGTTTTCGATGGTCATAACGGTGCGGAAGCTAGTGAGATGGCGTCAAAATTATTGATGGAGTATTTTGTTCTTCATACTTATTTTCTTCTTGATGCTACGTATTCTGTTATATCGAAAGCTTCGACAGGAACATTGCTTCATGGGAAAGATCATGATCATGTAAACGTATTGCATAGACGGAAAGAGATGTTAGGTTGGCAATTGAATGAACTGCATTCTGAAAGGTGCTTTTGCAATTGCATCTATAGTTTTAGTTTTTGTTAATAGATAATTGGTGAAAGGTGTTTCTGTATATCTAGTATTGTTGATCAAAGGTTGAGTATATAGTTTATTATGAAGCATTGACACAAAGACGAACACATCAACTCTAGTAATAATTTGAGAAAATAACATAATTGAATGTAATCACATGTGTAAGTGTCGGACTCCGAACTTGCGTTCGATCAGAAGCATCAGTGCTACAGTGTTTATTATGAATGATTGGTTTTATGTAGAGCTGTGAATGTCAGTGACATGTTAGTGCTTTTCTAATAATGAATGTGTGTCAGTTGGAAATGCGTAATCAGGTACATATCGTTTTGAATGTCAATTATGAATGATTGTTTTGTTGGTGTACAAGTGTGCTAAGTGTTTCAGTTTTCAAACAGCATTTAGTTTTACATTAATTCCATTTCTCACATTTGTATGTCTATATCTCAACTAAAAAAACCTTTCCAGGTTGCAGAATACATTTTCTGCTAATTTTGATGATTCTTTTCACTTGGAAATTTTGAAAGAAGCATTGTTGAGAGCAATTCATGATATTGATGAAAAGTTTTCTGAGGTAAGTTTGACTTTCTGTTCAATTTTACAAAAACTTCATTTGGTACTTTTTTGTATGTGTTCTTGTATTGACATCTTTCAATTAAACTATGAAGGAAGCCTCTAGGAATAACCTTCATTCAGGATCTACAGCAACAGTTGTATTGGTTGCAGATGATAAAATTTTGGTTGCCAATATTGGAGACTCCAAGGCTTTCTTGTGCTCTGAAAATTTTCAGTCTCCTAAGGAGGCTAAAGGTGAGAAAGATTATAAAATATAACCAAACTTCCATTGTTAAAAGATATAAGTTTATCATGGCAATATTAGGATATTGTATGTTATTCTTTTGTCTAAATATATCAGTATTATATAATGCGTGGTTATGATAATGTGACCAGCATACTTTTTATTGAAATGAAACACGACTATAAGGTTGTTAATTTCAATTTTTTGTTTGTAGCCTCTTTATTAAAGCTATATAGGCAGACAGAGCGTGATGGTTCTGTTTCTGTGTGGGATCGTGAAAAGTACAGATTAGCTTCTTCCCAAGGGCTCACTAATTTTGCCGTAAAGGAATTGACTAGGGATCATCATCCAGACAGAGAGGATGAAAGAACTCGTGTGGAAGCTGCTGGTGGTCAAGTTCTAAATTGGGGCGGTTTGCCTCGCGTAAATGGTCAGTTGGCTATAACACGGGCTATTGGCGACGTGTTCTTTAAAAGGTAGGTTCGGCGGAAATCATTTTCATAAACTCCAAGCCAATATCAACTTATCAAGTGTATCTGCAGCCTTATGTCATGTGCAAGGCGGTTCGTGTTTAGATACAAATTTAAACCAAGTCTCATTCTTAAATTAAGATTAAATTGCAAAATGGTAGGGAAGGACATGTGCTTTCTTCAAAACCAAAGCACTAATGCGTGTGGGGCTAATAATTTAAAATTTCAGGGTGACTGGTTTCTTAACAATTATGTGTTGAAATTGTAACACTTTTCTCATAATGAACTTTCAACAGTTATGGAGTTGTATCTGCACCAGAAGTGACTGATTGGCAGCCTCTAACTGCTAACGATAGCTACTTGGTGGCTGCATCTGATGGAGTCTTTGAGAAGTTGAGTGTGCAAGATGTCTGTGATTTGTTGTGGGAAGTACACCGTTTATGTGACATGAGATCAGATTGCACCTCTTCATCTTCTTATTCATTAGCAGATTTTATTATTAATACTGCCTTAAAAAAGGGCAGTATGGACAATATGGCAGCAGTTGTTGTTCCTCTGGAATCTTTCAAATCTTCTGCTAACTCGCTTAGAAGAAGCTACACTGAAAATGAGGATGCAGGTTTCCCATTATTTGGTCTGCAGGAATCTGCTTACAGAAGCTCAGGTATGTTTCATGGGTTTAAACAATGAGCTTCATATGTAGAGTTCAAGATACATTACCTCAAGATTTCCTCCCTATGATGATTGCTAATGCATATCAGTTTATACATAATGAATTGAATGTATATGGTATAATCAACAAGGTTTGGTTCATTTTTTCTCATTTAACAGGAAATTAATGTATATACTATTACTCTGACCTCTCCTGCAGTTTTCAAATCCTTTGCTTCACTGCACGAATTACCCCCCCCCATGTTATAATTATTCCATATGCCTACTGCTCCTTCACACAAACTTTAAAATTTTACTCGGATGAGTTTTCTAATTATCACATACTTCAAGTAAAGTCAATTTTTAAAAAAGGAAAATTATTAAGAAGAGGAAAAATATTACGAAGATAAAGAAGGATGATCCTAACTCCTAAGCAAAACAATATAAAAAAAATCAAGAAAAAAGCCAAAATATATTCTAGCAGTAACAGTTAGGGAAGAACTAAAGAACACGGGAGCATGGCAGTAGCAATTGGGGAAAAAAGCACACAAGAAGTAGGGTATATGACTGGCTGACAGTCAATGGAATACCTAAAGAAGATAGGGGGAAAAACATGAAAGGATGGAACTTTGGATTCAAAGACGGGTACTCTTAAAAAAAGCTCAGTAAAAGCTATCAAGAAGGTCCTCCCAACACCTTTTTAAAAGATCCTTTTATTTAGTTTTGCATCTAAGAAAGAGATAAATCTTTGGCCCAGCTTCGTTAAGGAGAAGAGATGCAAAAAGAAAAAAAAGGTCAGGCCGAACAAGCTCTGTGTGACATGTGCACAGAGATGCACATAATAGGCATGCTATATGTGCTCATTTTACTTATCGACGCAGTGTTACAAAATTATCTTTTCTAGATGCTACATTTGGTGTTCATTTGTATGTAACAATTGTTTATGTAATGTTTAAATTCAATGAAAAAAAAAAAAATTATCCAAGTTCTATGCTCGGACAGAAACTTAAATGATCACTAAATTTATTTAATCTGGTTGTTCCCTTATGTAGCTCGTGTTTTTTTATTGATTCTTATCAACTAATTTATTATTTGGAACTTACTCAGCCAATGGTATCACCTCTGATCGATTGCACCTGGAGCACCCTAATCTGCCAGATACCAAGTTTAAGCGAATAATGGTATGGCTGAAAGCCATCAGATTTATTATTGCTGATTTCTTTATTATTTTGTTTATGTCATAAATTGAATGTTTCTATGAAATTCAGGAATGCATTGATTTTTAAGAGCAGACTAATTGTATTTTGTCAATTTTAATAAAACTCTTGTATGATGACAATATATTGTTTGGTGGTGGGGTGCATAAATAGTAGGCAAAAAAGTTGTATTCTTTATTTGAGACTAGGCAACAAAGTTTTTCTATGCACATAATTTGATTATTAATTTCTCATTTTTCCACTTTCTTTGTGATGAAATGTAATTTTTGGCCGATTTATTAGCATTTTTGGTTGAAACCAAACCAGTTAATCTATTGCCAAAAAGCAGTTATTTTTCTTTTGAAGTCCCATTTTTCACTGAGATACAGGTGTAAATTTTCAATTTTTGGGAATTTAATATCTTTGTGTGTCCGCAAAACCAAATTTTCATCCTTGTCTATATGTTCTTTTAATATCATAATAAGTCATTGCACTTTGAAACAGAGAGATCCCTCTGATCAAAATTAATCTGAATAAATTCCTTTTGGTTTCCTTTTATGATAGGTTGAAGTGAAACATGGTGATTTTGGGTGTTTTTATTTATCAGAAAATCTTGGTGATTTGGTGGATTCTAAGTGGCTTGCCAAAAAAGATGACTGGGAAGACTATTTGTATGAACTACCCCAGCCTATACCAGATGCCCTTCATCAACAAGCTGGTAAGCGAAAATGTGATGCTATCTCTCATTATGTAATCTTTATGCACTTTTTAAGTTTATCTTAACTTACTGTCCTTATCTTACATTTTAGTTGACGATCAAATATACTTTGGTCGGTTCCTTTTTCAGTAGTAGATGGCCCTGTAATTTTGTACAACGACCAAAACTTCTGTTTTCACCTGAGTTCAACTATCAATGAAGCCAATGACCAATGCATAAATCCTGAAGGCTTTGCCAGTTTTATTGGTCTTCTTGAATCAATTCCTTTACATGATACTGGTTCAGATAACAGGTCTTCTGATTATTCAATGCCTGATTCAAGGTAAATTTATCTGCTTTCAGTTTCTATGCAGTGATACATCTATAAGCCGATATATGGTTGCTAGTAAAAGACACAGGCAGTATCTCGACCAAAAGTTGATATTCCCTTGAGTGTGTTTTATCTGGATGGCCAGTACTATCACTGCCATTACGTGTTGTTGTATGAGTTGAGCTTTTTCCCCTGCAAATTTGATGCTTTAAGTGTATATCTTTAGCTCAACAACTGAGACAATGTGCATTTTGGTGTGCAGGTATGTATTAAAGAGGAGTTTTGGTCGTGGATCATATGGTGAAGTATGGTTGGCTTTTCATTGGAATTGTAACCAAGGTAATATTACTGCAAAAATGAGCAAGGGTGACAATAATAGAAACAGCAGCTCAAGTAATCCTGAGTGTCAGGATGGTCCTTCTAACTACACCCTGTACATTTTGAAACGTATAATGGTAATACATTTGAATGAAGCAGAACTATTTTTAATGGTTTCGGTTTATCAGGATCTCTTTGGGTGTCATAAATTCATAATGCATTGTGAATTGTGAGAAAGAAGTATAAACCTATTTTATTACCACAACATAATTAATATGCAATAATTTTGTCGCCTTGCTGATTTGTACAAATTACGATCTGCACTCCCTGGGCTTTATTTAGAGGCTTGATATGTTTTTTCATCCCTATAAACATTTCTAGAAGTTGTGCATTGTGCGCTATGTGGATTATTTAGCCCAAGAGGGAGCTGCTCGCAGATGCGGAGACAATGGGCGGCCCCCTGGTGCCATGGTCACCCCCAAATTTTTTACTTTACTTAACACCCATATGTCAAACTACATCGAGGTCCCCTCGTAACACCACTCATGACATGATAGACAGATAGGATACAACCAATTCTCTTCTCATTTTTTGTTCTCGCACAACCACCTTGTTCAATTTTTTCTTCCTTTGCTAGACTGCTACTGTGTGTATGTGTTTTTCTGAGTGGTTGTGACTTGTGAGTCGTTTGGTTTCCATCTCTTTTTTGTTATCACTGCTTTTCTTTAAAGTGAGGGTAGCTTTAGTCCTTTCATTTTTGTCTTGGTTTTTCAATAAGTTGTGGCTTCATGGGAAGCTATCCCGCCCATGTTTCTTTATTTTTGTTACTTCCATTCCTTCTTTTGTCTTTGTTGGTGCTTCTGATAATGCTTTTAATACCTTTTGAATATAAATTTTAAATTTGATTTTAACTTTAACTTTGATTTTTAATTTTATTTTGCTTGATTATTTTATTTCTATTTTAGATGACTAATTCAATATAATTTTTAAAAGCAGTACCTTTATTATTTTCCTTCTTTGTCTCCATCGAGTTCAAAGGCTGGCTCTGCCCCTGGCAGCTTGCCTTATTCTATTAATTAATGGAGAATGTTAACCATTAATTAATTTGTCTTTCTTCAGCTTCTGTTGTGCACTTTGGGTCTGGTCCTCCTTTGATCCTTTCTCATTTCTCTCTGAAATTCGCCCAATCAAAAGAAAGGGGGATGTGTGCATAGACTTGGTGCTCTGTTAAGAACCATAAGCAAGAAAATAGAAAAAAGTGAAGGAAGATGAGTGGGAAAATTTGTAGTGTCTGTCAAATGAAATTGAAATCTGAATTGAGTAACTGAACTGAATACTGTGGACTGGTATCTAAATCACTAGGATATACCGAATGTACTTGGATGGTATTGAGGAATCATCCTTGAAACAATGTTCCAAAGAGCAAAGATTATATACACACTGACAGGAAATTGAGCCCCTGCCCTCTCCTTAACCAAGCGGTTCCTTCTAAATAAATTCCTCCCTTAATTCAAATAACAAACTAGTGTATATAGAGTTGCATCCATCACGTAATAAAACATAACTGACACAATTAACATATCTGTTCCTAAATAATAGCTACTACCGATAACATAATAACTGCCTAATAATATTTACTAATAAGAGGTTACACGGAAGGCCATTTATGGGGGAGAGAAGGAGAGAAACAGTTACAAATTGTTGAAACAAATTGCAACTGTTAGATTCTGTTAATAAGATAATCTCACCCACTAGAATCTTCTATGGTGAGTAACACCTATGTAAGCTGCATTGTTGTCTGATGAGGTCCAAGGCCCTAGTCCACAATATACAGAACAACACAAAGCTATCAACAGAAAACATAAAAGTTAAAACATAACAGAAAGCATAAGCTACACTTATCTCTAAAATGCTCTTTATCTTTTTTGCTTAGACTTTCTAAGGGGAAGTTTTTGTGTTCAGTAGGCACTGTATTTTTATTATACATATGTAAGCAGGTTATACAGATAACTCTTGATTGTACTGAACAGGTAGAGAAAGGGTCTGCTGTGTACTTGAGTGGGCTGAGGGAAAAACATTTTGGAGAAATTTTCTTAAATGCCTCCATGTGCTTTGAAGATGTGCTGTTGGCTGGAAAATCTAACTGCGTATACGAAACATCACAATATGATTCTGAGTATTCGTTTCAAAACAAATTTCGACTGCAAGGAGCCATATATGAAGAAGGTTTGAACCATATTGCAAGATATGTGGAATCTTTTGAGTCCCGGTCCAATGAAATATGGCTTGTATTCAGTTATGAAGGAGTGTCATTGTCAAAACTTTTATATACTGTAGAAGATGCAAACAATACTGCCGAGAACGAAAGACTTGAGCAAGTGAAACAGGTTCGGATACTACGTCCATCAAAGTGGTGGCGTTGGTTGAAAACAACAGAAGAAGGGCAAGAGGAAATGCGCAACCTTATCTGGCAACTGGTATGTCTTCAATGTAGGTTTGTAAGGGGTATTTATGTTATCCATATGGTTCGCTAATATATAACCATGAAAACTACGACAACACAACAACTTCCCCCCCCCCCCCCCCCCCCCCAATAAGGATTCGACAAAATTAAGTTTCTTGTTTTTACCATCACTGTTGTTATTTTTATTTGTATTATTGAACATGGTGTTAAACAAAAGTGAGATCAGTGTACCCACCCAATGAATGTGGAAAAGTTAATTTCTTTCTCAAAGGGAGGATACATGGATACAAAAAAGTAAAAGGACACTGTCACTATAAACCTTTTATGAGACCTCGTGTAATAGCTTTGGCTTCTAAGAGATTTGGTCTTTGACATGGTTTCAGAGCCTCCGTCCAAATAATCATAAATTTAATCCTCGCTGCCCCCATTCTTCTTAATTGAGGTAATTTAAGTATAATTAAGATGGCTTGTTAAAAAAAAAAAGTATAAGTAAGATGGGCCTTAGCGTTCCAAGCATCAGGCCCAAAGGATCTTTGTTAAGCAGCTTTTTAGATATAAAACCTTTTATAAGCCCTTGCTAGCTACTTCTTTTAGGAGAGTTGATCCTTGACAAGAATACAATTGCAATATTAGAGCAAGAACAATATCGATCATTTCTGCATATTACATCAAGTGTTTACATCTTAACTGCTTTATATGCAGCTAAGGCATGCACCTTTTCTGTCTGTTTTTTATATATCATAAACCTCTCTGTCTTGTCTTTTCATGTGTATATTCTGTTTTTTTTTCTTCTTACTTTTAAAAATTGTACTCATAATGTGATCCAAACCGATTCAAACAAGACTGCAAAACGATTCCAAAAACAAACCTAAAACCGAACAAAACTGATTTTACCAATTTTTCTTGAATGCTTTTTGGATCTCTTTCCGATCAAATATCAATTTATTTTTACTAATATTCTCTTTTATTTGCTCAGTTATTGGCACTCAAGTCTTGTCACGACCGCAATATCACACATAGGGATATTAAACCTGGTAAGACATGGGGGTAGTTTGTGGTGCCTAAGGGATGTATGCATGTAGATTTCTAGATAAACACTATTGTTTCACAAAGGATATCAATCATTTGGTACTGCTAAATTTGAAGTCACTAATGTTGAAGCACTTGATGTAAATGCTAAGTGGATTGTATTTGTTCAGATGTTAATTTATTTTATGGAAACTGACATGTTGCTATATTTTATAATAGACCCTCTTAATCAACCTGTCTTCATTTTGGGTTTCTAGATTTGCTACAACTAATTAAGCTGAAATCAATTCTGGTGATTCAATAGAATTTTTTTTTCTCAAATATGTGGGATCTTTGTCTCACTTTTGTATTTAATGTCTAATTGGTTAAAATACTATTACGATGGCCCTTTTTCTGCGGTCCATAATAAGACTGCAATCTGTGTCCCTCAGATGTATGTATCTGTGAATTTTCTTTTTATTATAATGTATTGTTCAATTGAAAGAACTTGTTTCCTTGTAAAATGTAACTGACTTGAGGTATGTTATTTTTGAAGAGAATATGGTGATATGCTTTGAAGATCCAGAGTCAGGGAGATGCTTGAAAGATGCTCCAACAAAAGTGAATAATTTTTCCACCAAAATGTATGGTGAAGTATTTTAGTATCCTTCTTTTATTCTAACCTTTTTTTTAGAATAAAAAATTGATGGGAAACAATGTAATCTTTTATGCTATATATTTGATGTATAGTTAACTTGCTTCTATTTATAATATGATTTGATCTATTGTGGTTAATCCATATTTTGTGTGCATACTGTGCATTTAGTGTTAACATTATCCTACATAATGAGCAGAAGTAATTTCTTGAACTCTTTGCCCAATGTGTTTCATAGTTTTGGTGTTCGTAAAAGTCTTCCTGCTAATGGATTTCCTCTTTTTAATGTTTGATAATCTAAAATGTTTTTCCTTCTCTTCCCCCACCCCCAAATTTTGAGTTAAGTTGGAGAATGACTGATGGCGGTATATAGTACTTGAACATATATTTCAACTTTCAAGTAAATTACTGCTCTAATCTGAGATATTCAAGAAACCATTTGAATATATATCTTTAAATCCACCAATTTATCTTGATGATCCTCAAAGAATGCCTGTGAACTGCATACCCTTCAAAGGATTGATCTTTTAGCATCTCTACCAGTCAAAGTTGGCCAACTAAGTTGGGCAGTAGGACTTTCCATGATGTTAAAATGTCAAGTCTTGATTTGTTGTTTGCATCAATAAGAGTACCCATCTAGGGACCTCCCTGTCTATGGAAGGGAATCTCTTTCCACTTCTTTCTTACTATTCTTCTTATAATTTAAATTATCTGCAATTTGGATGCACATTTAGTGTTCCTGGTTTCAGCACATCTATTCATAGTGGGTCTACTGTTAGTTATGTATCAGTGGATCCGGGCATCCGGCCGTCAGTTATGGTGACATTTTGCACGGATGTGCGTTAAGTAGAATTGCAATGCTTGCATGGTTCTTAAAGTATTGAAGTTTTCTTTGATCCTTTCTTACAGTACATTTGGACTTGAGACTTATCCATGTTATCTGGTGCATGAAAATTCTAAATTAATTTCTGATTTCCTGATACAATCTTTAATCCGGGCTTAGTTCAATAGATATCCATGTTTGACTATCTCCTGCTTACATTAAGAAAAAAATTTCTTTATCTGGTTTTTTTGTATATAAATTGATAATCATTGGTTTGAGTCTTCAACAATGATAGCAGTACAACTGGGTTATTGCTTACCTTTAAAATTGGATTTGGCTATCAAATTATTTGCATGTGTGTGTGTATGCGCATGCATGCATATTTTACTGTTTTGCTTGCTGAATTTGATGTCCTTTTTCTGTTTCTTGTAGGCGTATTATTGACTTTGGAAGTGGAATTGACGAGTTCACAATAAAGCATTTATATGCTTCTACTGGGCCTTCTAGGTATCTTATTGCTCAGTCTAAATACTAGTATTATTGACTTATTTAATTTATTTATATGTGATTTTTGTGATAAACGTGTGCTTTATGTTATTTCAGAGCTGAACAAACTTACGAGTACACACCTCCTGAAGCTTTGCTAAATGCTACATGGTATCGAGGGCCATCAAGCTCAACTTTGAAGTATGTCATATTTTGCATGACTTACGCATCTTGTATTTCTTTTTCTAAAAGATTTTGCATGATTGTTTGGTGGATTTAGATTTTAGACGGTATTACTTGAAAATTTTGAAGCAATCTTTCTGCTATTACAGGTATGACATGTGGAGTGTTGGTGTTGTGATGTTAGAGATGGTCTTAGGGACACCAAATATTTTCCAGATAAATGCTTTAACACGTGCTCTTTTAGATCGGCATCTTGAGGGCTGGAATGAGGGTGTGAAGGAGCTGGCATACAAGTAAGTGTGCCTTTTAGAAGGCTGTAATCATAACCTTCTTTAATACTGTAAATTTTTGGCCCTCTGACAAATATTTTTTCTCTATAAACCAGAAAGACAGCTAACATTAATTCATGTGGTGCACCAATTTCATAGTGAATGCACCGAGTTATTTATTTATTTTGTTTCCCGAGATGCCTTCTAAGCCAAGATTGCTTGCTGATGGTTTTTAGTAGTAGTTGTAAACTCAACTGTGAATTTGTAGCACAACGCTAGTTCATTCTGAAGACTTGCATATTTGAACCTCTGGAATCTATATTATCGCTATTTATTTTATTAATGTGGCCGACAGACTTAGATCGTTCATGGAATTGTGCATCTTAATCCCTGGGGTTTCTGGCAGCTACTCAAAAAAGTATCACAAAGTGAATCAAGTAAGTTTACCTTCTTAGCCGGGACAGTCTCTGGTTCATGACCTTGTCAAAAGCTAATTATTTTGTTTAAACTTTTTCTCTTCTTAATGTATAACATTGGTTCACAACTTTTACTTTTATGATGGAAAATGTTTTGTTGTAATAATGTTATAAATGAATTGGTTTGGTTCTGTTGATTCTTCAAAACTGAGCTTGTTTTCAACACAGATAAGTAGTGACTAGAGACAAAGATAATCTCCAAAGTTCAGGTGCTTATTACTTAAGAACTCTCCCAATTCTAATATCCCAAAGATAATAACAGTAGGTAAATATGATTTAGAAAAGGGTTTATCATCGGAGTAAGAAGCCTCTCAGATCTGGAATTTTATAATTCCCCTAAAAGATGGCTGGATGCATATCCCTAGGATTATTTAATGTTTATCAACAACCGTTGTGGCCAGCCCAACATGTCAAAGCTCAAATTTCTTCAAAAAAATAAGATGTCAAAGCTCAAATAACCTTGAGGTTTAAAATGCGTTGAAAAATACAAGACTATTTATATCTTCCTGTTTCTCAATCATTTTGTATGGTTGGCCCTACCTAAACTGCATTACTGATGGAATGATATTGTCTCCAATATTTACCGAGAATTCAATTTATTCAGATATCTATTTAGAAAAATATTTGTTCAACCTAGTCAGAAACATGGACCAAAATCTTGGATTTCATTCCCTTGGGGAAGATTGACTTGAAGCTTTGATTGTCTGTTTCTAGATTAGTCCATTCCAATGGTTCATAGGCCGTGGGGTCAGTAACCTTGTGTTGAGACAAAAGTAACAAATTGTTACTTCTCACAAAAGCCAACATTGGAACGCGAAACAAACCATCTCTATGGTTCACAAACATGCTTTAGTTGTTGGAGACACACTGCCTTCCAACTTCCTTATTTATATTGCCTAATGAAGTTTTCTTTTCTGTCATTATAGGTTGGAGTTTCGCCTGCATCCTGGAAATGCTCTGAAGAATTCTTTTCTAGACAAATTAAGGCTAGAGATCCTCTTAAAATAGGGTTGGCTGGCTAACTTTTTATGCTTTTATCGTGCTATGAAATATATTTAGTCTTCTCCTATGAAGCAGTTGTTCTCTTCATAACATTTTTGTTAGTCTTGCAGTTTTTCAGACATCTGGGCTTTACGGTTAGTGCGCCATCTGCTTATGTGGGACCCGGTAAGTTTCCTGATAACTTTTGATTGTAATTTTGTGATCCTAAAGTTCCATATTTCAAAAAAGTTTGTTCAAAGAAACTATCTAAACTATTTGCCATCCTGGTCTTAGCATTAAAATTTGATTGCCCTGTGTGCAGCTGTACTAAACACTCTAATATCTTGGTAATAGGAGCTTAAGTTTATTTCGCTACAAAGGCTGTTCATTTATTTTAGTTTTTACTGTGTGTGAAGTTCAACAAAACCTCATTTTATCTTCGTTCTATTCACCAAAAGAAAAGAAAAATACTTTATATTCGTTCTTGTCAATCTTTTGGTCAACAACTGCTTTAGTTGGGTAGTGTTGTATCTGATGAAGGTCTCTTACTCTCTTTATATTTTGCAGGAGGATCGGCCAAGTGTTGACGAGGCATTGCGGCATCCCTATTTCCAACCTCCACCAAGAAGATAA
Protein sequence

>MS.gene39941.t1

MIRKHFFIALGFLLLSATIPFTHAESSTCLTVYKHGGAPAVFQSPKCPRWNLFDHNSRPQSTTRCHSAMLQGRRKSQEDRTLCVLDLRIPFPGAMGIKEVVVGIVAVFDGHNGAEASEMASKLLMEYFVLHTYFLLDATYSVISKASTGTLLHGKDHDHVNVLHRRKEMLGWQLNELHSERLQNTFSANFDDSFHLEILKEALLRAIHDIDEKFSEEASRNNLHSGSTATVVLVADDKILVANIGDSKAFLCSENFQSPKEAKASLLKLYRQTERDGSVSVWDREKYRLASSQGLTNFAVKELTRDHHPDREDERTRVEAAGGQVLNWGGLPRVNGQLAITRAIGDVFFKSYGVVSAPEVTDWQPLTANDSYLVAASDGVFEKLSVQDVCDLLWEVHRLCDMRSDCTSSSSYSLADFIINTALKKGSMDNMAAVVVPLESFKSSANSLRRSYTENEDAGFPLFGLQESAYRSSANGITSDRLHLEHPNLPDTKFKRIMVEVKHGDFGCFYLSENLGDLVDSKWLAKKDDWEDYLYELPQPIPDALHQQAVVDGPVILYNDQNFCFHLSSTINEANDQCINPEGFASFIGLLESIPLHDTGSDNRSSDYSMPDSRYVLKRSFGRGSYGEVWLAFHWNCNQGNITAKMSKGDNNRNSSSSNPECQDGPSNYTLYILKRIMVEKGSAVYLSGLREKHFGEIFLNASMCFEDVLLAGKSNCVYETSQYDSEYSFQNKFRLQGAIYEEGLNHIARYVESFESRSNEIWLVFSYEGVSLSKLLYTVEDANNTAENERLEQVKQVRILRPSKWWRWLKTTEEGQEEMRNLIWQLLLALKSCHDRNITHRDIKPENMVICFEDPESGRCLKDAPTKVNNFSTKMRIIDFGSGIDEFTIKHLYASTGPSRAEQTYEYTPPEALLNATWYRGPSSSTLKYDMWSVGVVMLEMVLGTPNIFQINALTRALLDRHLEGWNEGVKELAYKLRSFMELCILIPGVSGSYSKKYHKVNQVGVSPASWKCSEEFFSRQIKARDPLKIGFSDIWALRLVRHLLMWDPEDRPSVDEALRHPYFQPPPRR