Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40317.t1 | XP_024635013.1 | 80.3 | 488 | 90 | 3 | 1 | 487 | 176 | 658 | 6.60E-195 | 690.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40317.t1 | Q8L860 | 48.5 | 526 | 189 | 16 | 1 | 485 | 186 | 670 | 7.7e-67 | 256.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40317.t1 | G7ZWF8 | 80.3 | 488 | 90 | 3 | 1 | 487 | 186 | 668 | 4.8e-195 | 690.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056609 | MS.gene40317 | -0.819517 | 1.11E-52 | -1.69E-46 |
| MS.gene059708 | MS.gene40317 | -0.809592 | 1.75E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 155 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACCAGAGGATAAGTTATT+TGG | 0.124259 | 3.2:+87736753 | MS.gene40317:CDS |
| CAGCCACTTTCACCTGTTTA+TGG | 0.126297 | 3.2:+87735959 | MS.gene40317:CDS |
| TGATAGTTTGTTGTTGAAAT+TGG | 0.154844 | 3.2:-87735808 | None:intergenic |
| CTCGGGCCTGGAGTGGATTT+TGG | 0.162976 | 3.2:-87736804 | None:intergenic |
| TGGTTTGGAAGGCGGCTTTC+CGG | 0.226834 | 3.2:-87736736 | None:intergenic |
| TCAGAATGCACGTGGTATTA+TGG | 0.268271 | 3.2:+87734055 | MS.gene40317:CDS |
| GCAAGTGAATTATCTGCTTT+TGG | 0.287886 | 3.2:-87735662 | None:intergenic |
| TTTGCAGCCTCCGTATATTC+AGG | 0.289691 | 3.2:+87736473 | MS.gene40317:CDS |
| CATAGCCATATCCCATAAAT+TGG | 0.296109 | 3.2:-87736584 | None:intergenic |
| GGGTGTTGCAGGTCCTTATA+TGG | 0.299157 | 3.2:+87736494 | MS.gene40317:CDS |
| GATGTATGGTAACCAATTTA+TGG | 0.321411 | 3.2:+87736572 | MS.gene40317:CDS |
| CCGTATATTCAGGGTGTTGC+AGG | 0.327653 | 3.2:+87736483 | MS.gene40317:CDS |
| ACCACTGAGCAGATCCCATT+TGG | 0.333883 | 3.2:-87735624 | None:intergenic |
| GATAGTTTGTTGTTGAAATT+GGG | 0.336251 | 3.2:-87735807 | None:intergenic |
| TGCGGAACCATGCCCATATA+AGG | 0.336698 | 3.2:-87736507 | None:intergenic |
| GCAGGAAGTTATTGTTGATT+TGG | 0.338111 | 3.2:+87734295 | MS.gene40317:CDS |
| GGTAACCAATTTATGGGATA+TGG | 0.339100 | 3.2:+87736579 | MS.gene40317:CDS |
| AACCAGAGGATAAGTTATTT+GGG | 0.347303 | 3.2:+87736754 | MS.gene40317:CDS |
| GCTCCACTAGGTTCAGGATT+TGG | 0.354891 | 3.2:-87734669 | None:intergenic |
| TCATCTTCTAGTGCTGAAAC+AGG | 0.356782 | 3.2:+87735524 | MS.gene40317:CDS |
| GATGGTCCTTTGATTGATAC+TGG | 0.364838 | 3.2:+87734705 | MS.gene40317:CDS |
| CAAGCATGAATCCATTTCTT+CGG | 0.367425 | 3.2:+87734575 | MS.gene40317:CDS |
| CTGCACAACCTGACCATTCC+AGG | 0.370652 | 3.2:-87735924 | None:intergenic |
| AAATAACTTATCCTCTGGTT+TGG | 0.380511 | 3.2:-87736751 | None:intergenic |
| CCAGGTTCAAAGTAACCAAT+TGG | 0.383361 | 3.2:+87736449 | MS.gene40317:CDS |
| AACAGCAGCTCCCGAAGAAA+TGG | 0.383599 | 3.2:-87734586 | None:intergenic |
| AACAGCAGCTCCCGAAGAAA+TGG | 0.383599 | 3.2:-87734628 | None:intergenic |
| CCTGCAACACCCTGAATATA+CGG | 0.393117 | 3.2:-87736483 | None:intergenic |
| CAAGCATGAATCCATTTCTT+CGG | 0.406373 | 3.2:+87734617 | MS.gene40317:CDS |
| ACCACGTGCATTCTGAGTTT+CGG | 0.407034 | 3.2:-87734048 | None:intergenic |
| CAGTGAAGGTTGATCCCAAA+TGG | 0.409314 | 3.2:+87735609 | MS.gene40317:CDS |
| TGTTGAAATTGGGGAGCTAT+TGG | 0.413408 | 3.2:-87735797 | None:intergenic |
| CCTCAAGGACCTCAAGCAAC+CGG | 0.414607 | 3.2:+87736363 | MS.gene40317:CDS |
| CATTAGGCATACTTCCATTC+GGG | 0.418856 | 3.2:-87735850 | None:intergenic |
| ATGTATGGTAACCAATTTAT+GGG | 0.419270 | 3.2:+87736573 | MS.gene40317:CDS |
| GCTATTGGCTGGGTATTAAC+AGG | 0.423010 | 3.2:-87735782 | None:intergenic |
| CATCTTACTTCTTTGTTACC+AGG | 0.423970 | 3.2:-87734110 | None:intergenic |
| GGTTATTGATTGAAGAGAAA+TGG | 0.429629 | 3.2:-87736428 | None:intergenic |
| GAAGAGAAATGGCTAGCATT+TGG | 0.431656 | 3.2:-87736417 | None:intergenic |
| CATTTGGGATCAACCTTCAC+TGG | 0.435486 | 3.2:-87735608 | None:intergenic |
| CCAATTGGTTACTTTGAACC+TGG | 0.436130 | 3.2:-87736449 | None:intergenic |
| AAGCATGAATCCATTTCTTC+GGG | 0.436716 | 3.2:+87734576 | MS.gene40317:CDS |
| ATAAGTGCTCCACTAGGTTC+AGG | 0.438996 | 3.2:-87734675 | None:intergenic |
| ACATTAGGCATACTTCCATT+CGG | 0.446912 | 3.2:-87735851 | None:intergenic |
| TCCCCAAATAACTTATCCTC+TGG | 0.451046 | 3.2:-87736756 | None:intergenic |
| CCACTGAGCAGATCCCATTT+GGG | 0.453424 | 3.2:-87735623 | None:intergenic |
| AAGGGCTATCAGCTCGGGCC+TGG | 0.454477 | 3.2:-87736816 | None:intergenic |
| GTTCCGCATCAAATGCAAAA+TGG | 0.454661 | 3.2:+87736522 | MS.gene40317:CDS |
| CAGCAACAGCAACAGCAACA+AGG | 0.460459 | 3.2:+87736615 | MS.gene40317:CDS |
| GCATTAAGCACACCATAAAC+AGG | 0.464450 | 3.2:-87735971 | None:intergenic |
| GGAAGTTATTGTTGATTTGG+TGG | 0.464730 | 3.2:+87734298 | MS.gene40317:CDS |
| CTCAAAACACAGGTCCTGCC+TGG | 0.465691 | 3.2:+87735906 | MS.gene40317:CDS |
| AAGCATGAATCCATTTCTTC+GGG | 0.465734 | 3.2:+87734618 | MS.gene40317:CDS |
| CTGGCAGGCTGTTGTTCTAC+AGG | 0.466956 | 3.2:-87735692 | None:intergenic |
| TTGAATTTCCCAAGGAGGAG+GGG | 0.471155 | 3.2:-87736256 | None:intergenic |
| CATCATTAAGCGCTAGTCCT+TGG | 0.472343 | 3.2:-87734533 | None:intergenic |
| ACCGGGTATGACCAGGCTGC+TGG | 0.476987 | 3.2:+87736381 | MS.gene40317:CDS |
| CAGGTTCAAAGTAACCAATT+GGG | 0.478110 | 3.2:+87736450 | MS.gene40317:CDS |
| TTTGTAAGGGCTATCAGCTC+GGG | 0.481803 | 3.2:-87736821 | None:intergenic |
| CCTGCACCCTCTACATCAAA+TGG | 0.483843 | 3.2:+87735575 | MS.gene40317:CDS |
| CTGTGACTTGCACTGGCTGC+GGG | 0.488265 | 3.2:-87736317 | None:intergenic |
| ACGGAGGCTGCAAACCCAAT+TGG | 0.489405 | 3.2:-87736464 | None:intergenic |
| TACCGAGGTGACCCCACATT+AGG | 0.493533 | 3.2:-87735866 | None:intergenic |
| CATAAGATGCAGCAGAAACC+TGG | 0.494461 | 3.2:-87736707 | None:intergenic |
| ATGCTCACTGCTTTAGAGCC+TGG | 0.495603 | 3.2:+87734092 | MS.gene40317:CDS |
| CGAAGAAATGGATTCATGCT+TGG | 0.496667 | 3.2:-87734574 | None:intergenic |
| AGCAACAGCAACAGCAACAA+GGG | 0.497781 | 3.2:+87736616 | MS.gene40317:CDS |
| GGTTGAATTTCCCAAGGAGG+AGG | 0.498498 | 3.2:-87736258 | None:intergenic |
| TGCAGGTCCTTATATGGGCA+TGG | 0.498686 | 3.2:+87736500 | MS.gene40317:CDS |
| TGAATTTCCCAAGGAGGAGG+GGG | 0.499455 | 3.2:-87736255 | None:intergenic |
| GCTGCATCTTATGCGCCATC+CGG | 0.500035 | 3.2:+87736717 | MS.gene40317:CDS |
| GAAATTGGGGAGCTATTGGC+TGG | 0.502387 | 3.2:-87735793 | None:intergenic |
| TATATCGAGCAGCAAATGTA+TGG | 0.503614 | 3.2:+87736645 | MS.gene40317:CDS |
| GGCTGGGTATTAACAGGAGT+TGG | 0.506116 | 3.2:-87735776 | None:intergenic |
| ATGTATCCTCAACAGATGTA+TGG | 0.507691 | 3.2:+87736558 | MS.gene40317:CDS |
| TTGCAGCCTCCGTATATTCA+GGG | 0.508667 | 3.2:+87736474 | MS.gene40317:CDS |
| AGGTCCTGCCTGGAATGGTC+AGG | 0.512257 | 3.2:+87735916 | MS.gene40317:CDS |
| CTATCAGCTCGGGCCTGGAG+TGG | 0.512288 | 3.2:-87736811 | None:intergenic |
| CCATTAGAAAACAAATCAAA+AGG | 0.512332 | 3.2:-87735743 | None:intergenic |
| GGAGCACTTATAGATGTTGA+TGG | 0.512452 | 3.2:+87734687 | MS.gene40317:CDS |
| AACTTATCCTCTGGTTTGGA+AGG | 0.514136 | 3.2:-87736747 | None:intergenic |
| TGTTGAGACACAGGACTGGC+AGG | 0.516466 | 3.2:-87735707 | None:intergenic |
| GGGTATTGACTGCCAGCTAC+TGG | 0.517236 | 3.2:-87736297 | None:intergenic |
| ACTTCTATGTTTAGGGGCTC+CGG | 0.517634 | 3.2:+87734273 | MS.gene40317:intron |
| CCATTTGATGTAGAGGGTGC+AGG | 0.521544 | 3.2:-87735575 | None:intergenic |
| ATACATCTGTTGAGGATACA+TGG | 0.521773 | 3.2:-87736556 | None:intergenic |
| CAATTTATGGGATATGGCTA+TGG | 0.527206 | 3.2:+87736585 | MS.gene40317:CDS |
| TTGGAAGGCGGCTTTCCGGA+TGG | 0.527600 | 3.2:-87736732 | None:intergenic |
| ATTTGCTGCTCGATATATTG+AGG | 0.531229 | 3.2:-87736639 | None:intergenic |
| TTATCCTCTGGTTTGGAAGG+CGG | 0.532994 | 3.2:-87736744 | None:intergenic |
| ACATGTACTGTGACTTGCAC+TGG | 0.533492 | 3.2:-87736324 | None:intergenic |
| GCATATACATTCCAGCAGCC+TGG | 0.534083 | 3.2:-87736392 | None:intergenic |
| AGCTGAACCATTTGATGTAG+AGG | 0.537424 | 3.2:-87735582 | None:intergenic |
| GGTGTTGCAGGTCCTTATAT+GGG | 0.537499 | 3.2:+87736495 | MS.gene40317:CDS |
| GACAATGGTAGTCCAGTAGC+TGG | 0.538228 | 3.2:+87736285 | MS.gene40317:CDS |
| GTTGAATTTCCCAAGGAGGA+GGG | 0.538979 | 3.2:-87736257 | None:intergenic |
| ACTGTGACTTGCACTGGCTG+CGG | 0.541717 | 3.2:-87736318 | None:intergenic |
| ACACCATAAACAGGTGAAAG+TGG | 0.547806 | 3.2:-87735962 | None:intergenic |
| TGGTCATACCCGGTTGCTTG+AGG | 0.547959 | 3.2:-87736372 | None:intergenic |
| CTCAAGGACCTCAAGCAACC+GGG | 0.558195 | 3.2:+87736364 | MS.gene40317:CDS |
| TGCTTGAGGTCCTTGAGGAA+AGG | 0.559727 | 3.2:-87736358 | None:intergenic |
| GAATGGAAGTATGCCTAATG+TGG | 0.560091 | 3.2:+87735853 | MS.gene40317:CDS |
| CTATGTTTAGGGGCTCCGGC+AGG | 0.560292 | 3.2:+87734277 | MS.gene40317:intron |
| AGTGAAGGTTGATCCCAAAT+GGG | 0.560648 | 3.2:+87735610 | MS.gene40317:CDS |
| TCCAGCAGCCTGGTCATACC+CGG | 0.565437 | 3.2:-87736382 | None:intergenic |
| TATAGTGATTGCTCGTACCG+AGG | 0.568798 | 3.2:-87735881 | None:intergenic |
| AACACAGGTCCTGCCTGGAA+TGG | 0.569316 | 3.2:+87735911 | MS.gene40317:CDS |
| TGGTTACCATACATCTGTTG+AGG | 0.570071 | 3.2:-87736564 | None:intergenic |
| CTTACGAAGTTGAATTAACA+AGG | 0.570283 | 3.2:-87734355 | None:intergenic |
| TTTCTCTTCAATCAATAACC+AGG | 0.571915 | 3.2:+87736431 | MS.gene40317:CDS |
| TCAAGCAACCGGGTATGACC+AGG | 0.575154 | 3.2:+87736374 | MS.gene40317:CDS |
| GTGAAACCAAAATCCACTCC+AGG | 0.579035 | 3.2:+87736798 | MS.gene40317:CDS |
| TGCTTCAAGAAATCCTTACC+AGG | 0.579404 | 3.2:+87736689 | MS.gene40317:CDS |
| CAAACTGCTGCCTTTCCTCA+AGG | 0.584269 | 3.2:+87736348 | MS.gene40317:CDS |
| GATGCAGCAGAAACCTGGTA+AGG | 0.584332 | 3.2:-87736702 | None:intergenic |
| CAACAAACTATCATATCTCA+AGG | 0.585121 | 3.2:+87735818 | MS.gene40317:CDS |
| AATGGAAGTATGCCTAATGT+GGG | 0.588245 | 3.2:+87735854 | MS.gene40317:CDS |
| TGGTTCAGCTCCTCCAGTGA+AGG | 0.594973 | 3.2:+87735595 | MS.gene40317:CDS |
| AAACAAATCAAAAGGAACAA+GGG | 0.598241 | 3.2:-87735735 | None:intergenic |
| TCTGCAGGTTGAATTTCCCA+AGG | 0.598478 | 3.2:-87736264 | None:intergenic |
| ACTGGACTACCATTGTCTGC+AGG | 0.600277 | 3.2:-87736279 | None:intergenic |
| ATAGTTTGTTGTTGAAATTG+GGG | 0.600673 | 3.2:-87735806 | None:intergenic |
| GCTGAACCATTTGATGTAGA+GGG | 0.603821 | 3.2:-87735581 | None:intergenic |
| AGGGCATTCTGTTGAGACAC+AGG | 0.605690 | 3.2:-87735716 | None:intergenic |
| AATCAACAATAACTTCCTGC+CGG | 0.613189 | 3.2:-87734292 | None:intergenic |
| GCTGTTGTTCTACAGGAACA+AGG | 0.614193 | 3.2:-87735685 | None:intergenic |
| GTATCTCCAGTATCAATCAA+AGG | 0.615345 | 3.2:-87734711 | None:intergenic |
| TGCCTAATGTGGGGTCACCT+CGG | 0.615879 | 3.2:+87735864 | MS.gene40317:CDS |
| TGAGGATACATGGAAGCCAC+AGG | 0.621883 | 3.2:-87736546 | None:intergenic |
| AAAACAAATCAAAAGGAACA+AGG | 0.622707 | 3.2:-87735736 | None:intergenic |
| TTGGGATCAACCTTCACTGG+AGG | 0.627110 | 3.2:-87735605 | None:intergenic |
| TTGCATACAGGTACACAAAG+TGG | 0.629394 | 3.2:+87736222 | MS.gene40317:intron |
| ATTCTGTTGAGACACAGGAC+TGG | 0.630325 | 3.2:-87735711 | None:intergenic |
| ACCAGAGGATAAGTTATTTG+GGG | 0.632546 | 3.2:+87736755 | MS.gene40317:CDS |
| ACAACCTGACCATTCCAGGC+AGG | 0.633653 | 3.2:-87735920 | None:intergenic |
| AAATTGGGGAGCTATTGGCT+GGG | 0.637244 | 3.2:-87735792 | None:intergenic |
| ACATCTATAAGTGCTCCACT+AGG | 0.638431 | 3.2:-87734681 | None:intergenic |
| TCACTATATACTCAAAACAC+AGG | 0.644749 | 3.2:+87735896 | MS.gene40317:CDS |
| CATCTTCTAGTGCTGAAACA+GGG | 0.647210 | 3.2:+87735525 | MS.gene40317:CDS |
| TCAAATGCAAAATGGTCCTG+TGG | 0.648758 | 3.2:+87736530 | MS.gene40317:CDS |
| GAAATTCAACCTGCAGACAA+TGG | 0.649172 | 3.2:+87736270 | MS.gene40317:CDS |
| CTGTTGTTCTACAGGAACAA+GGG | 0.660835 | 3.2:-87735684 | None:intergenic |
| GATGAGTCACTTCTATGCCA+AGG | 0.664596 | 3.2:+87734516 | MS.gene40317:CDS |
| CCGGTTGCTTGAGGTCCTTG+AGG | 0.666770 | 3.2:-87736363 | None:intergenic |
| TCGCACATACAAGCAAAGAG+TGG | 0.675738 | 3.2:+87734328 | MS.gene40317:CDS |
| AAACCAAATCCTGAACCTAG+TGG | 0.679490 | 3.2:+87734666 | MS.gene40317:CDS |
| CTAGTAAACAAACTGATGCG+AGG | 0.685460 | 3.2:+87734733 | MS.gene40317:CDS |
| GCAGGTTGAATTTCCCAAGG+AGG | 0.701517 | 3.2:-87736261 | None:intergenic |
| GCAACACCCTGAATATACGG+AGG | 0.711843 | 3.2:-87736480 | None:intergenic |
| ATGGAAGTATGCCTAATGTG+GGG | 0.715188 | 3.2:+87735855 | MS.gene40317:CDS |
| CATACAGGTACACAAAGTGG+CGG | 0.720999 | 3.2:+87736225 | MS.gene40317:intron |
| ACCGAAACTCAGAATGCACG+TGG | 0.721407 | 3.2:+87734047 | MS.gene40317:CDS |
| AAAGCCGCCTTCCAAACCAG+AGG | 0.725364 | 3.2:+87736740 | MS.gene40317:CDS |
| ACGAAGTTGAATTAACAAGG+TGG | 0.725368 | 3.2:-87734352 | None:intergenic |
| CCCAAATGGGATCTGCTCAG+TGG | 0.742827 | 3.2:+87735623 | MS.gene40317:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAACTAGTTATTATTTA+TGG | + | chr3.2:87734477-87734496 | MS.gene40317:intron | 10.0% |
| !! | CTACATATTCAAAAAAAAAA+CGG | - | chr3.2:87734226-87734245 | None:intergenic | 15.0% |
| !! | GAATTACTTGAATTATAATT+GGG | - | chr3.2:87734837-87734856 | None:intergenic | 15.0% |
| !! | TGAATTACTTGAATTATAAT+TGG | - | chr3.2:87734838-87734857 | None:intergenic | 15.0% |
| !!! | ATAATAACTAGTTTTTTCTT+TGG | - | chr3.2:87734474-87734493 | None:intergenic | 15.0% |
| !!! | TAATTTATTTTGGATTGTTA+GGG | + | chr3.2:87735069-87735088 | MS.gene40317:intron | 15.0% |
| !!! | TGAAAAATGAATTTTAGTAA+GGG | + | chr3.2:87735244-87735263 | MS.gene40317:intron | 15.0% |
| !! | AATAGAACATAATTGTGAAA+GGG | - | chr3.2:87736030-87736049 | None:intergenic | 20.0% |
| !! | ATGAAAAATTTGCAAATCTT+TGG | + | chr3.2:87736098-87736117 | MS.gene40317:intron | 20.0% |
| !! | TAAAACTTGAAAATCAAAAC+AGG | - | chr3.2:87735140-87735159 | None:intergenic | 20.0% |
| !!! | AGTTCTGTTCTAATTTATTT+TGG | + | chr3.2:87735059-87735078 | MS.gene40317:intron | 20.0% |
| !!! | CTAATTTATTTTGGATTGTT+AGG | + | chr3.2:87735068-87735087 | MS.gene40317:intron | 20.0% |
| !!! | CTGAAAAATGAATTTTAGTA+AGG | + | chr3.2:87735243-87735262 | MS.gene40317:intron | 20.0% |
| !!! | TTTTTTTTATTCTTGCATAC+AGG | + | chr3.2:87736210-87736229 | MS.gene40317:intron | 20.0% |
| ! | AAAACAAATCAAAAGGAACA+AGG | - | chr3.2:87735739-87735758 | None:intergenic | 25.0% |
| ! | AAAATATCATGTGAAACTTG+AGG | + | chr3.2:87734179-87734198 | MS.gene40317:intron | 25.0% |
| ! | AAAATCAAAACAGGTAATAC+TGG | - | chr3.2:87735131-87735150 | None:intergenic | 25.0% |
| ! | AAACAAATCAAAAGGAACAA+GGG | - | chr3.2:87735738-87735757 | None:intergenic | 25.0% |
| ! | AAATATCATGTGAAACTTGA+GGG | + | chr3.2:87734180-87734199 | MS.gene40317:intron | 25.0% |
| ! | ACTAAAAAGTTAATCAGACA+AGG | + | chr3.2:87735199-87735218 | MS.gene40317:intron | 25.0% |
| ! | AGAATCATGTGTATTATAAC+AGG | - | chr3.2:87734869-87734888 | None:intergenic | 25.0% |
| ! | AGCCATATAATATAACCAAA+AGG | - | chr3.2:87735480-87735499 | None:intergenic | 25.0% |
| ! | ATAAACATGCAGAAATAGAT+TGG | + | chr3.2:87735415-87735434 | MS.gene40317:intron | 25.0% |
| ! | ATGTATGGTAACCAATTTAT+GGG | + | chr3.2:87736573-87736592 | MS.gene40317:CDS | 25.0% |
| ! | CATATAGTAGAACACATAAA+TGG | - | chr3.2:87735341-87735360 | None:intergenic | 25.0% |
| ! | CCATTAGAAAACAAATCAAA+AGG | - | chr3.2:87735746-87735765 | None:intergenic | 25.0% |
| ! | GAATAGAACATAATTGTGAA+AGG | - | chr3.2:87736031-87736050 | None:intergenic | 25.0% |
| ! | GAATCATGTGTATTATAACA+GGG | - | chr3.2:87734868-87734887 | None:intergenic | 25.0% |
| ! | TTATATTTGCCAATGATACT+GGG | + | chr3.2:87734947-87734966 | MS.gene40317:intron | 25.0% |
| ! | TTATGTGTTCTACTATATGT+CGG | + | chr3.2:87735342-87735361 | MS.gene40317:intron | 25.0% |
| !! | ATGTAAAGAATATGATGATG+TGG | - | chr3.2:87734405-87734424 | None:intergenic | 25.0% |
| !!! | ATAGTTTGTTGTTGAAATTG+GGG | - | chr3.2:87735809-87735828 | None:intergenic | 25.0% |
| !!! | CCTTTTGATTTGTTTTCTAA+TGG | + | chr3.2:87735743-87735762 | MS.gene40317:CDS | 25.0% |
| !!! | GATAGTTTGTTGTTGAAATT+GGG | - | chr3.2:87735810-87735829 | None:intergenic | 25.0% |
| !!! | TCACTTTTGAAAAGTCAATA+AGG | - | chr3.2:87736782-87736801 | None:intergenic | 25.0% |
| !!! | TGATAGTTTGTTGTTGAAAT+TGG | - | chr3.2:87735811-87735830 | None:intergenic | 25.0% |
| !!! | TGCCTTTTGGTTATATTATA+TGG | + | chr3.2:87735475-87735494 | MS.gene40317:intron | 25.0% |
| !!! | TTATGGTTTAATTTTCTCCA+GGG | + | chr3.2:87734494-87734513 | MS.gene40317:intron | 25.0% |
| !!! | TTTATGGTTTAATTTTCTCC+AGG | + | chr3.2:87734493-87734512 | MS.gene40317:intron | 25.0% |
| AAACCAGAGGATAAGTTATT+TGG | + | chr3.2:87736753-87736772 | MS.gene40317:CDS | 30.0% | |
| AAATAACTTATCCTCTGGTT+TGG | - | chr3.2:87736754-87736773 | None:intergenic | 30.0% | |
| AACCAGAGGATAAGTTATTT+GGG | + | chr3.2:87736754-87736773 | MS.gene40317:CDS | 30.0% | |
| ACCATTACTTCTATGTTTAG+GGG | + | chr3.2:87734267-87734286 | MS.gene40317:intron | 30.0% | |
| ATTTCTGCTCTCATTTATGT+TGG | + | chr3.2:87736184-87736203 | MS.gene40317:intron | 30.0% | |
| CAACAAACTATCATATCTCA+AGG | + | chr3.2:87735818-87735837 | MS.gene40317:CDS | 30.0% | |
| CTTACGAAGTTGAATTAACA+AGG | - | chr3.2:87734358-87734377 | None:intergenic | 30.0% | |
| CTTGTTAATTCAACTTCGTA+AGG | + | chr3.2:87734356-87734375 | MS.gene40317:intron | 30.0% | |
| GACCATTACTTCTATGTTTA+GGG | + | chr3.2:87734266-87734285 | MS.gene40317:intron | 30.0% | |
| GATGTATGGTAACCAATTTA+TGG | + | chr3.2:87736572-87736591 | MS.gene40317:CDS | 30.0% | |
| GTTATATTTGCCAATGATAC+TGG | + | chr3.2:87734946-87734965 | MS.gene40317:intron | 30.0% | |
| TCACTATATACTCAAAACAC+AGG | + | chr3.2:87735896-87735915 | MS.gene40317:CDS | 30.0% | |
| TGACCATTACTTCTATGTTT+AGG | + | chr3.2:87734265-87734284 | MS.gene40317:intron | 30.0% | |
| TTGAGGAGATGTCATTATTT+AGG | + | chr3.2:87736161-87736180 | MS.gene40317:intron | 30.0% | |
| TTTCTCTTCAATCAATAACC+AGG | + | chr3.2:87736431-87736450 | MS.gene40317:CDS | 30.0% | |
| ! | ATAAAGTATCCCAGTATCAT+TGG | - | chr3.2:87734959-87734978 | None:intergenic | 30.0% |
| ! | GGTTATTGATTGAAGAGAAA+TGG | - | chr3.2:87736431-87736450 | None:intergenic | 30.0% |
| ! | TCATTCTTCTTATTTGACCT+GGG | + | chr3.2:87735291-87735310 | MS.gene40317:intron | 30.0% |
| ! | TTCATTCTTCTTATTTGACC+TGG | + | chr3.2:87735290-87735309 | MS.gene40317:intron | 30.0% |
| !! | AAACTTGAGGGTTTTATCAA+TGG | + | chr3.2:87734192-87734211 | MS.gene40317:intron | 30.0% |
| !! | AACTTGAGGGTTTTATCAAT+GGG | + | chr3.2:87734193-87734212 | MS.gene40317:intron | 30.0% |
| AAGCATGAATCCATTTCTTC+GGG | + | chr3.2:87734576-87734595 | MS.gene40317:CDS | 35.0% | |
| AATCAACAATAACTTCCTGC+CGG | - | chr3.2:87734295-87734314 | None:intergenic | 35.0% | |
| ACATCTCCTCAAAATTCAAC+AGG | - | chr3.2:87736153-87736172 | None:intergenic | 35.0% | |
| ACATTAGGCATACTTCCATT+CGG | - | chr3.2:87735854-87735873 | None:intergenic | 35.0% | |
| ACCAGAGGATAAGTTATTTG+GGG | + | chr3.2:87736755-87736774 | MS.gene40317:CDS | 35.0% | |
| ACGAAGTTGAATTAACAAGG+TGG | - | chr3.2:87734355-87734374 | None:intergenic | 35.0% | |
| ATACATCTGTTGAGGATACA+TGG | - | chr3.2:87736559-87736578 | None:intergenic | 35.0% | |
| ATGAATGCAGAGAGTAGAAA+TGG | - | chr3.2:87734783-87734802 | None:intergenic | 35.0% | |
| ATGTATCCTCAACAGATGTA+TGG | + | chr3.2:87736558-87736577 | MS.gene40317:CDS | 35.0% | |
| CAAGCATGAATCCATTTCTT+CGG | + | chr3.2:87734575-87734594 | MS.gene40317:CDS | 35.0% | |
| CAATTTATGGGATATGGCTA+TGG | + | chr3.2:87736585-87736604 | MS.gene40317:CDS | 35.0% | |
| CAGGTTCAAAGTAACCAATT+GGG | + | chr3.2:87736450-87736469 | MS.gene40317:CDS | 35.0% | |
| CATAGCCATATCCCATAAAT+TGG | - | chr3.2:87736587-87736606 | None:intergenic | 35.0% | |
| CATCTTACTTCTTTGTTACC+AGG | - | chr3.2:87734113-87734132 | None:intergenic | 35.0% | |
| CTCTCTGCATTCATTAACAT+AGG | + | chr3.2:87734789-87734808 | MS.gene40317:intron | 35.0% | |
| GGTAACCAATTTATGGGATA+TGG | + | chr3.2:87736579-87736598 | MS.gene40317:CDS | 35.0% | |
| GTATCTCCAGTATCAATCAA+AGG | - | chr3.2:87734714-87734733 | None:intergenic | 35.0% | |
| GTCTGATCTCTTTGCTTTAT+GGG | + | chr3.2:87734994-87735013 | MS.gene40317:intron | 35.0% | |
| TATATCGAGCAGCAAATGTA+TGG | + | chr3.2:87736645-87736664 | MS.gene40317:CDS | 35.0% | |
| TCATCATGAAAAAGAACAGC+AGG | - | chr3.2:87734382-87734401 | None:intergenic | 35.0% | |
| TCTGATCTCTTTGCTTTATG+GGG | + | chr3.2:87734995-87735014 | MS.gene40317:intron | 35.0% | |
| TGTCTGATCTCTTTGCTTTA+TGG | + | chr3.2:87734993-87735012 | MS.gene40317:intron | 35.0% | |
| ! | AATGGAAGTATGCCTAATGT+GGG | + | chr3.2:87735854-87735873 | MS.gene40317:CDS | 35.0% |
| ! | ATGGATCATAGGCTTAGTTT+TGG | + | chr3.2:87735369-87735388 | MS.gene40317:intron | 35.0% |
| ! | ATTTGCTGCTCGATATATTG+AGG | - | chr3.2:87736642-87736661 | None:intergenic | 35.0% |
| ! | CAGTAACCTGTTGAATTTTG+AGG | + | chr3.2:87736144-87736163 | MS.gene40317:intron | 35.0% |
| ! | GCAAGTGAATTATCTGCTTT+TGG | - | chr3.2:87735665-87735684 | None:intergenic | 35.0% |
| ! | GCAGGAAGTTATTGTTGATT+TGG | + | chr3.2:87734295-87734314 | MS.gene40317:CDS | 35.0% |
| !! | ACTTGAGGGTTTTATCAATG+GGG | + | chr3.2:87734194-87734213 | MS.gene40317:intron | 35.0% |
| !! | GGAAGTTATTGTTGATTTGG+TGG | + | chr3.2:87734298-87734317 | MS.gene40317:CDS | 35.0% |
| !! | GGGCTTGTTTGATTGTATTT+TGG | + | chr3.2:87735089-87735108 | MS.gene40317:intron | 35.0% |
| !! | TCTGATCTCTGCTTTTAAGT+TGG | + | chr3.2:87736072-87736091 | MS.gene40317:intron | 35.0% |
| !!! | GAGTTTTGGCTTTAAAGCTA+GGG | + | chr3.2:87735028-87735047 | MS.gene40317:intron | 35.0% |
| !!! | TGAGTTTTGGCTTTAAAGCT+AGG | + | chr3.2:87735027-87735046 | MS.gene40317:intron | 35.0% |
| AAACCAAATCCTGAACCTAG+TGG | + | chr3.2:87734666-87734685 | MS.gene40317:CDS | 40.0% | |
| ACACCATAAACAGGTGAAAG+TGG | - | chr3.2:87735965-87735984 | None:intergenic | 40.0% | |
| ACATCTATAAGTGCTCCACT+AGG | - | chr3.2:87734684-87734703 | None:intergenic | 40.0% | |
| AGCTGAACCATTTGATGTAG+AGG | - | chr3.2:87735585-87735604 | None:intergenic | 40.0% | |
| CATTAGGCATACTTCCATTC+GGG | - | chr3.2:87735853-87735872 | None:intergenic | 40.0% | |
| CCAGGTTCAAAGTAACCAAT+TGG | + | chr3.2:87736449-87736468 | MS.gene40317:CDS | 40.0% | |
| CTAGTAAACAAACTGATGCG+AGG | + | chr3.2:87734733-87734752 | MS.gene40317:CDS | 40.0% | |
| CTGTTGTTCTACAGGAACAA+GGG | - | chr3.2:87735687-87735706 | None:intergenic | 40.0% | |
| GAAATTCAACCTGCAGACAA+TGG | + | chr3.2:87736270-87736289 | MS.gene40317:CDS | 40.0% | |
| GAAGAGAAATGGCTAGCATT+TGG | - | chr3.2:87736420-87736439 | None:intergenic | 40.0% | |
| GATGGTCCTTTGATTGATAC+TGG | + | chr3.2:87734705-87734724 | MS.gene40317:CDS | 40.0% | |
| GCATTAAGCACACCATAAAC+AGG | - | chr3.2:87735974-87735993 | None:intergenic | 40.0% | |
| GCCCCTAAACATAGAAGTAA+TGG | - | chr3.2:87734271-87734290 | None:intergenic | 40.0% | |
| GCTGAACCATTTGATGTAGA+GGG | - | chr3.2:87735584-87735603 | None:intergenic | 40.0% | |
| GTTCCGCATCAAATGCAAAA+TGG | + | chr3.2:87736522-87736541 | MS.gene40317:CDS | 40.0% | |
| TCAAATGCAAAATGGTCCTG+TGG | + | chr3.2:87736530-87736549 | MS.gene40317:CDS | 40.0% | |
| TCAGAATGCACGTGGTATTA+TGG | + | chr3.2:87734055-87734074 | MS.gene40317:CDS | 40.0% | |
| TCCCCAAATAACTTATCCTC+TGG | - | chr3.2:87736759-87736778 | None:intergenic | 40.0% | |
| TCTACTATATGTCGGAGCAA+TGG | + | chr3.2:87735350-87735369 | MS.gene40317:intron | 40.0% | |
| TGCTTCAAGAAATCCTTACC+AGG | + | chr3.2:87736689-87736708 | MS.gene40317:CDS | 40.0% | |
| TGGTTACCATACATCTGTTG+AGG | - | chr3.2:87736567-87736586 | None:intergenic | 40.0% | |
| TGTTGAAATTGGGGAGCTAT+TGG | - | chr3.2:87735800-87735819 | None:intergenic | 40.0% | |
| TTGCATACAGGTACACAAAG+TGG | + | chr3.2:87736222-87736241 | MS.gene40317:intron | 40.0% | |
| ! | AGTGAAGGTTGATCCCAAAT+GGG | + | chr3.2:87735610-87735629 | MS.gene40317:CDS | 40.0% |
| ! | ATGGAAGTATGCCTAATGTG+GGG | + | chr3.2:87735855-87735874 | MS.gene40317:CDS | 40.0% |
| ! | CAAGGTGTATTTTACCCGAA+TGG | + | chr3.2:87735836-87735855 | MS.gene40317:CDS | 40.0% |
| ! | CATCTTCTAGTGCTGAAACA+GGG | + | chr3.2:87735525-87735544 | MS.gene40317:CDS | 40.0% |
| ! | CCAATTGGTTACTTTGAACC+TGG | - | chr3.2:87736452-87736471 | None:intergenic | 40.0% |
| ! | CGAAGAAATGGATTCATGCT+TGG | - | chr3.2:87734577-87734596 | None:intergenic | 40.0% |
| ! | GAATGGAAGTATGCCTAATG+TGG | + | chr3.2:87735853-87735872 | MS.gene40317:CDS | 40.0% |
| ! | GGACCATTTTGCATTTGATG+CGG | - | chr3.2:87736528-87736547 | None:intergenic | 40.0% |
| ! | GGAGCACTTATAGATGTTGA+TGG | + | chr3.2:87734687-87734706 | MS.gene40317:CDS | 40.0% |
| ! | GGGGAATTGAAGATGAGTTT+TGG | + | chr3.2:87735014-87735033 | MS.gene40317:intron | 40.0% |
| ! | TCATCTTCTAGTGCTGAAAC+AGG | + | chr3.2:87735524-87735543 | MS.gene40317:CDS | 40.0% |
| !! | AACTTATCCTCTGGTTTGGA+AGG | - | chr3.2:87736750-87736769 | None:intergenic | 40.0% |
| !! | CTTGAGGGTTTTATCAATGG+GGG | + | chr3.2:87734195-87734214 | MS.gene40317:intron | 40.0% |
| !! | TCAAGTTGACTAAACCTGTC+TGG | + | chr3.2:87735452-87735471 | MS.gene40317:intron | 40.0% |
| ACAGGTTACTGCTACTGAGT+TGG | - | chr3.2:87736135-87736154 | None:intergenic | 45.0% | |
| ACCACGTGCATTCTGAGTTT+CGG | - | chr3.2:87734051-87734070 | None:intergenic | 45.0% | |
| ACTTCTATGTTTAGGGGCTC+CGG | + | chr3.2:87734273-87734292 | MS.gene40317:intron | 45.0% | |
| AGCAACAGCAACAGCAACAA+GGG | + | chr3.2:87736616-87736635 | MS.gene40317:CDS | 45.0% | |
| ATAAGTGCTCCACTAGGTTC+AGG | - | chr3.2:87734678-87734697 | None:intergenic | 45.0% | |
| ATGTCGGAGCAATGGATCAT+AGG | + | chr3.2:87735358-87735377 | MS.gene40317:intron | 45.0% | |
| ATTCTGTTGAGACACAGGAC+TGG | - | chr3.2:87735714-87735733 | None:intergenic | 45.0% | |
| CAGAGAGTAGAAATGGAGAG+CGG | - | chr3.2:87734776-87734795 | None:intergenic | 45.0% | |
| CATAAGATGCAGCAGAAACC+TGG | - | chr3.2:87736710-87736729 | None:intergenic | 45.0% | |
| CATACAGGTACACAAAGTGG+CGG | + | chr3.2:87736225-87736244 | MS.gene40317:intron | 45.0% | |
| CATCATTAAGCGCTAGTCCT+TGG | - | chr3.2:87734536-87734555 | None:intergenic | 45.0% | |
| CCTGCAACACCCTGAATATA+CGG | - | chr3.2:87736486-87736505 | None:intergenic | 45.0% | |
| GATGAGTCACTTCTATGCCA+AGG | + | chr3.2:87734516-87734535 | MS.gene40317:CDS | 45.0% | |
| GCTGTTGTTCTACAGGAACA+AGG | - | chr3.2:87735688-87735707 | None:intergenic | 45.0% | |
| GTGAAACCAAAATCCACTCC+AGG | + | chr3.2:87736798-87736817 | MS.gene40317:CDS | 45.0% | |
| GTTGAATTTCCCAAGGAGGA+GGG | - | chr3.2:87736260-87736279 | None:intergenic | 45.0% | |
| TATAGTGATTGCTCGTACCG+AGG | - | chr3.2:87735884-87735903 | None:intergenic | 45.0% | |
| TCGCACATACAAGCAAAGAG+TGG | + | chr3.2:87734328-87734347 | MS.gene40317:CDS | 45.0% | |
| TGAAAGGGTTTGAGCTAGAC+AGG | - | chr3.2:87736015-87736034 | None:intergenic | 45.0% | |
| TTGAATTTCCCAAGGAGGAG+GGG | - | chr3.2:87736259-87736278 | None:intergenic | 45.0% | |
| TTGCAGCCTCCGTATATTCA+GGG | + | chr3.2:87736474-87736493 | MS.gene40317:CDS | 45.0% | |
| TTTGCAGCCTCCGTATATTC+AGG | + | chr3.2:87736473-87736492 | MS.gene40317:CDS | 45.0% | |
| ! | AAATTGGGGAGCTATTGGCT+GGG | - | chr3.2:87735795-87735814 | None:intergenic | 45.0% |
| ! | ACATGTACTGTGACTTGCAC+TGG | - | chr3.2:87736327-87736346 | None:intergenic | 45.0% |
| ! | CAGCCACTTTCACCTGTTTA+TGG | + | chr3.2:87735959-87735978 | MS.gene40317:CDS | 45.0% |
| ! | CAGTGAAGGTTGATCCCAAA+TGG | + | chr3.2:87735609-87735628 | MS.gene40317:CDS | 45.0% |
| ! | CATTTGGGATCAACCTTCAC+TGG | - | chr3.2:87735611-87735630 | None:intergenic | 45.0% |
| ! | GCTATTGGCTGGGTATTAAC+AGG | - | chr3.2:87735785-87735804 | None:intergenic | 45.0% |
| ! | GGTGTTGCAGGTCCTTATAT+GGG | + | chr3.2:87736495-87736514 | MS.gene40317:CDS | 45.0% |
| ! | TAAACCTGTCTGGTGCCTTT+TGG | + | chr3.2:87735462-87735481 | MS.gene40317:intron | 45.0% |
| ! | TCTGCAGGTTGAATTTCCCA+AGG | - | chr3.2:87736267-87736286 | None:intergenic | 45.0% |
| !! | ATAACCAAAAGGCACCAGAC+AGG | - | chr3.2:87735469-87735488 | None:intergenic | 45.0% |
| !! | TTATCCTCTGGTTTGGAAGG+CGG | - | chr3.2:87736747-87736766 | None:intergenic | 45.0% |
| AACAGCAGCTCCCGAAGAAA+TGG | - | chr3.2:87734589-87734608 | None:intergenic | 50.0% | |
| ACCACTGAGCAGATCCCATT+TGG | - | chr3.2:87735627-87735646 | None:intergenic | 50.0% | |
| ACCGAAACTCAGAATGCACG+TGG | + | chr3.2:87734047-87734066 | MS.gene40317:CDS | 50.0% | |
| ACTGGACTACCATTGTCTGC+AGG | - | chr3.2:87736282-87736301 | None:intergenic | 50.0% | |
| ATCATTTCCCCCTCCTCCTT+GGG | + | chr3.2:87736248-87736267 | MS.gene40317:CDS | 50.0% | |
| CAAACTGCTGCCTTTCCTCA+AGG | + | chr3.2:87736348-87736367 | MS.gene40317:CDS | 50.0% | |
| CAGCAACAGCAACAGCAACA+AGG | + | chr3.2:87736609-87736628 | MS.gene40317:CDS | 50.0% | |
| CCACTGAGCAGATCCCATTT+GGG | - | chr3.2:87735626-87735645 | None:intergenic | 50.0% | |
| CCTGCACCCTCTACATCAAA+TGG | + | chr3.2:87735575-87735594 | MS.gene40317:CDS | 50.0% | |
| CTGTGACACATAATGCTCCC+AGG | - | chr3.2:87735311-87735330 | None:intergenic | 50.0% | |
| GAAATTGGGGAGCTATTGGC+TGG | - | chr3.2:87735796-87735815 | None:intergenic | 50.0% | |
| GACAATGGTAGTCCAGTAGC+TGG | + | chr3.2:87736285-87736304 | MS.gene40317:CDS | 50.0% | |
| GATGCAGCAGAAACCTGGTA+AGG | - | chr3.2:87736705-87736724 | None:intergenic | 50.0% | |
| GCAACACCCTGAATATACGG+AGG | - | chr3.2:87736483-87736502 | None:intergenic | 50.0% | |
| GCATAGAAGTGACTCATCCC+TGG | - | chr3.2:87734514-87734533 | None:intergenic | 50.0% | |
| GCATATACATTCCAGCAGCC+TGG | - | chr3.2:87736395-87736414 | None:intergenic | 50.0% | |
| GCTCCACTAGGTTCAGGATT+TGG | - | chr3.2:87734672-87734691 | None:intergenic | 50.0% | |
| GGCTGGGTATTAACAGGAGT+TGG | - | chr3.2:87735779-87735798 | None:intergenic | 50.0% | |
| GGTTGAATTTCCCAAGGAGG+AGG | - | chr3.2:87736261-87736280 | None:intergenic | 50.0% | |
| TGAATTTCCCAAGGAGGAGG+GGG | - | chr3.2:87736258-87736277 | None:intergenic | 50.0% | |
| TGAGGATACATGGAAGCCAC+AGG | - | chr3.2:87736549-87736568 | None:intergenic | 50.0% | |
| TGCAGGTCCTTATATGGGCA+TGG | + | chr3.2:87736500-87736519 | MS.gene40317:CDS | 50.0% | |
| TGCGGAACCATGCCCATATA+AGG | - | chr3.2:87736510-87736529 | None:intergenic | 50.0% | |
| TGCTTGAGGTCCTTGAGGAA+AGG | - | chr3.2:87736361-87736380 | None:intergenic | 50.0% | |
| TGGAGAGCGGCAATAGACAT+TGG | - | chr3.2:87734763-87734782 | None:intergenic | 50.0% | |
| TTGGGATCAACCTTCACTGG+AGG | - | chr3.2:87735608-87735627 | None:intergenic | 50.0% | |
| ! | AGGGCATTCTGTTGAGACAC+AGG | - | chr3.2:87735719-87735738 | None:intergenic | 50.0% |
| ! | CCATTTGATGTAGAGGGTGC+AGG | - | chr3.2:87735578-87735597 | None:intergenic | 50.0% |
| ! | GCAGGTTGAATTTCCCAAGG+AGG | - | chr3.2:87736264-87736283 | None:intergenic | 50.0% |
| ! | GGGTGTTGCAGGTCCTTATA+TGG | + | chr3.2:87736494-87736513 | MS.gene40317:CDS | 50.0% |
| !! | ATGCTCACTGCTTTAGAGCC+TGG | + | chr3.2:87734092-87734111 | MS.gene40317:CDS | 50.0% |
| !! | CCGTATATTCAGGGTGTTGC+AGG | + | chr3.2:87736483-87736502 | MS.gene40317:CDS | 50.0% |
| !! | CTGGGAGCATTATGTGTCAC+AGG | + | chr3.2:87735309-87735328 | MS.gene40317:intron | 50.0% |
| AAAGCCGCCTTCCAAACCAG+AGG | + | chr3.2:87736740-87736759 | MS.gene40317:CDS | 55.0% | |
| AACACAGGTCCTGCCTGGAA+TGG | + | chr3.2:87735911-87735930 | MS.gene40317:CDS | 55.0% | |
| ACAACCTGACCATTCCAGGC+AGG | - | chr3.2:87735923-87735942 | None:intergenic | 55.0% | |
| ACGGAGGCTGCAAACCCAAT+TGG | - | chr3.2:87736467-87736486 | None:intergenic | 55.0% | |
| CCCAAATGGGATCTGCTCAG+TGG | + | chr3.2:87735623-87735642 | MS.gene40317:CDS | 55.0% | |
| CCTCAAGGACCTCAAGCAAC+CGG | + | chr3.2:87736363-87736382 | MS.gene40317:CDS | 55.0% | |
| CTCAAAACACAGGTCCTGCC+TGG | + | chr3.2:87735906-87735925 | MS.gene40317:CDS | 55.0% | |
| CTCAAGGACCTCAAGCAACC+GGG | + | chr3.2:87736364-87736383 | MS.gene40317:CDS | 55.0% | |
| CTGCACAACCTGACCATTCC+AGG | - | chr3.2:87735927-87735946 | None:intergenic | 55.0% | |
| CTGGCAGGCTGTTGTTCTAC+AGG | - | chr3.2:87735695-87735714 | None:intergenic | 55.0% | |
| GATCATTTCCCCCTCCTCCT+TGG | + | chr3.2:87736247-87736266 | MS.gene40317:CDS | 55.0% | |
| GCTGCATCTTATGCGCCATC+CGG | + | chr3.2:87736717-87736736 | MS.gene40317:CDS | 55.0% | |
| TACCGAGGTGACCCCACATT+AGG | - | chr3.2:87735869-87735888 | None:intergenic | 55.0% | |
| TCAAGCAACCGGGTATGACC+AGG | + | chr3.2:87736374-87736393 | MS.gene40317:CDS | 55.0% | |
| TGCCTAATGTGGGGTCACCT+CGG | + | chr3.2:87735864-87735883 | MS.gene40317:CDS | 55.0% | |
| TGGTCATACCCGGTTGCTTG+AGG | - | chr3.2:87736375-87736394 | None:intergenic | 55.0% | |
| TGGTTCAGCTCCTCCAGTGA+AGG | + | chr3.2:87735595-87735614 | MS.gene40317:CDS | 55.0% | |
| ! | TGGTTTGGAAGGCGGCTTTC+CGG | - | chr3.2:87736739-87736758 | None:intergenic | 55.0% |
| ! | TGTTGAGACACAGGACTGGC+AGG | - | chr3.2:87735710-87735729 | None:intergenic | 55.0% |
| !! | ACTGTGACTTGCACTGGCTG+CGG | - | chr3.2:87736321-87736340 | None:intergenic | 55.0% |
| !! | GGGTATTGACTGCCAGCTAC+TGG | - | chr3.2:87736300-87736319 | None:intergenic | 55.0% |
| AGGTCCTGCCTGGAATGGTC+AGG | + | chr3.2:87735916-87735935 | MS.gene40317:CDS | 60.0% | |
| CCGGTTGCTTGAGGTCCTTG+AGG | - | chr3.2:87736366-87736385 | None:intergenic | 60.0% | |
| CTATGTTTAGGGGCTCCGGC+AGG | + | chr3.2:87734277-87734296 | MS.gene40317:intron | 60.0% | |
| TCCAGCAGCCTGGTCATACC+CGG | - | chr3.2:87736385-87736404 | None:intergenic | 60.0% | |
| TTGGAAGGCGGCTTTCCGGA+TGG | - | chr3.2:87736735-87736754 | None:intergenic | 60.0% | |
| !! | CTCGGGCCTGGAGTGGATTT+TGG | - | chr3.2:87736807-87736826 | None:intergenic | 60.0% |
| !! | CTGTGACTTGCACTGGCTGC+GGG | - | chr3.2:87736320-87736339 | None:intergenic | 60.0% |
| ACCGGGTATGACCAGGCTGC+TGG | + | chr3.2:87736381-87736400 | MS.gene40317:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 87734043 | 87736830 | 87734043 | ID=MS.gene40317 |
| chr3.2 | mRNA | 87734043 | 87736830 | 87734043 | ID=MS.gene40317.t1;Parent=MS.gene40317 |
| chr3.2 | exon | 87734043 | 87734124 | 87734043 | ID=MS.gene40317.t1.exon1;Parent=MS.gene40317.t1 |
| chr3.2 | CDS | 87734043 | 87734124 | 87734043 | ID=cds.MS.gene40317.t1;Parent=MS.gene40317.t1 |
| chr3.2 | exon | 87734287 | 87734372 | 87734287 | ID=MS.gene40317.t1.exon2;Parent=MS.gene40317.t1 |
| chr3.2 | CDS | 87734287 | 87734372 | 87734287 | ID=cds.MS.gene40317.t1;Parent=MS.gene40317.t1 |
| chr3.2 | exon | 87734515 | 87734754 | 87734515 | ID=MS.gene40317.t1.exon3;Parent=MS.gene40317.t1 |
| chr3.2 | CDS | 87734515 | 87734754 | 87734515 | ID=cds.MS.gene40317.t1;Parent=MS.gene40317.t1 |
| chr3.2 | exon | 87735523 | 87735980 | 87735523 | ID=MS.gene40317.t1.exon4;Parent=MS.gene40317.t1 |
| chr3.2 | CDS | 87735523 | 87735980 | 87735523 | ID=cds.MS.gene40317.t1;Parent=MS.gene40317.t1 |
| chr3.2 | exon | 87736232 | 87736830 | 87736232 | ID=MS.gene40317.t1.exon5;Parent=MS.gene40317.t1 |
| chr3.2 | CDS | 87736232 | 87736830 | 87736232 | ID=cds.MS.gene40317.t1;Parent=MS.gene40317.t1 |
| Gene Sequence |
| Protein sequence |
