AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene40438

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40438.t1 MTR_6g477900 98.326 239 4 0 1 239 1 239 0.0 497
MS.gene40438.t1 MTR_3g064580 75.309 162 39 1 1 161 1 162 1.30e-89 278
MS.gene40438.t1 MTR_5g076850 74.375 160 41 0 1 160 1 160 1.12e-85 267
MS.gene40438.t1 MTR_2g064090 71.519 158 44 1 1 157 1 158 3.61e-83 252
MS.gene40438.t1 MTR_5g014300 57.005 207 78 3 1 199 1 204 2.20e-75 231
MS.gene40438.t1 MTR_4g098630 63.750 160 55 1 1 157 1 160 6.27e-70 217
MS.gene40438.t1 MTR_3g096140 47.805 205 98 2 8 205 9 211 2.73e-62 196
MS.gene40438.t1 MTR_3g093040 46.544 217 108 2 1 217 103 311 2.82e-61 195
MS.gene40438.t1 MTR_3g096140 47.805 205 98 2 8 205 9 211 3.36e-61 196
MS.gene40438.t1 MTR_1g097300 59.006 161 66 0 8 168 21 181 6.11e-61 201
MS.gene40438.t1 MTR_3g093050 47.945 219 109 2 1 217 17 232 3.74e-60 199
MS.gene40438.t1 MTR_5g041940 50.000 188 87 3 6 189 3 187 5.02e-60 190
MS.gene40438.t1 MTR_4g035590 57.051 156 63 2 5 159 7 159 5.56e-60 192
MS.gene40438.t1 MTR_3g093050 47.945 219 109 2 1 217 17 232 9.22e-60 199
MS.gene40438.t1 MTR_4g036030 52.381 168 75 3 6 170 7 172 1.16e-59 192
MS.gene40438.t1 MTR_5g069030 46.352 233 111 3 6 238 25 243 3.23e-59 197
MS.gene40438.t1 MTR_1g096430 57.237 152 62 2 6 156 7 156 6.85e-59 189
MS.gene40438.t1 MTR_4g101680 53.289 152 68 2 6 156 7 156 1.88e-58 189
MS.gene40438.t1 MTR_2g062730 57.051 156 61 4 4 156 8 160 2.82e-58 188
MS.gene40438.t1 MTR_8g063550 54.902 153 69 0 6 158 6 158 3.43e-58 187
MS.gene40438.t1 MTR_4g081870 45.729 199 98 5 6 200 9 201 4.00e-58 185
MS.gene40438.t1 MTR_5g021710 55.263 152 65 2 6 156 8 157 7.15e-58 187
MS.gene40438.t1 MTR_8g063550 54.902 153 69 0 6 158 6 158 1.24e-57 189
MS.gene40438.t1 MTR_8g063550 54.902 153 69 0 6 158 6 158 1.25e-57 189
MS.gene40438.t1 MTR_8g076110 47.486 179 91 2 6 183 6 182 1.59e-57 185
MS.gene40438.t1 MTR_3g096920 54.487 156 65 3 6 158 7 159 1.04e-56 182
MS.gene40438.t1 MTR_5g012080 54.902 153 66 3 6 156 7 158 1.61e-56 184
MS.gene40438.t1 MTR_1g090720 58.025 162 62 1 4 159 40 201 1.70e-56 187
MS.gene40438.t1 MTR_2g079990 51.592 157 74 1 1 157 11 165 1.87e-56 184
MS.gene40438.t1 MTR_8g024480 47.126 174 82 2 6 169 15 188 2.49e-56 186
MS.gene40438.t1 MTR_8g059170 52.830 159 71 2 1 157 9 165 8.13e-56 181
MS.gene40438.t1 MTR_1g090723 57.237 152 63 2 8 158 10 160 1.26e-55 187
MS.gene40438.t1 MTR_1g090723 57.237 152 63 2 8 158 10 160 2.00e-55 187
MS.gene40438.t1 MTR_6g084430 47.236 199 95 5 6 200 5 197 3.64e-55 179
MS.gene40438.t1 MTR_8g093580 52.941 153 72 0 6 158 6 158 5.61e-55 183
MS.gene40438.t1 MTR_7g085220 44.271 192 81 4 4 182 6 184 7.68e-55 179
MS.gene40438.t1 MTR_2g078700 56.051 157 63 3 6 158 23 177 1.55e-54 179
MS.gene40438.t1 MTR_0036s0150 57.237 152 63 2 8 158 7 157 1.65e-54 183
MS.gene40438.t1 MTR_2g080010 48.889 180 77 3 6 172 15 192 3.54e-54 178
MS.gene40438.t1 MTR_3g088110 46.429 196 91 5 2 194 3 187 4.34e-54 176
MS.gene40438.t1 MTR_2g093810 49.405 168 77 3 6 167 14 179 4.47e-54 177
MS.gene40438.t1 MTR_8g094580 53.503 157 66 4 6 158 7 160 4.80e-54 175
MS.gene40438.t1 MTR_1g090723 55.263 152 67 1 8 158 10 161 5.71e-54 183
MS.gene40438.t1 MTR_1g008740 55.769 156 63 4 6 158 13 165 5.73e-54 177
MS.gene40438.t1 MTR_1g008740 55.769 156 63 4 6 158 27 179 7.07e-54 177
MS.gene40438.t1 MTR_3g109340 55.484 155 64 3 6 158 22 173 7.85e-54 177
MS.gene40438.t1 MTR_6g012670 52.147 163 74 2 6 166 20 180 2.40e-53 175
MS.gene40438.t1 MTR_4g108760 53.595 153 67 2 6 156 17 167 3.35e-53 175
MS.gene40438.t1 MTR_3g096920 54.054 148 63 3 6 153 7 149 5.40e-53 174
MS.gene40438.t1 MTR_3g109340 54.194 155 65 3 6 158 22 172 1.27e-52 174
MS.gene40438.t1 MTR_1g069805 41.395 215 116 4 4 214 8 216 1.40e-52 171
MS.gene40438.t1 MTR_6g032770 49.689 161 75 3 3 159 15 173 1.55e-52 174
MS.gene40438.t1 MTR_7g100990 44.974 189 96 3 2 184 7 193 2.84e-52 172
MS.gene40438.t1 MTR_3g435150 53.896 154 67 2 6 157 16 167 5.66e-52 171
MS.gene40438.t1 MTR_2157s0010 45.026 191 83 5 6 183 8 189 1.00e-51 169
MS.gene40438.t1 MTR_2g079990 44.624 186 71 3 1 157 11 193 1.09e-51 172
MS.gene40438.t1 MTR_3g096140 45.026 191 96 2 22 205 2 190 1.44e-51 171
MS.gene40438.t1 MTR_6g011860 48.235 170 76 3 6 165 15 182 1.81e-51 172
MS.gene40438.t1 MTR_3g116070 45.714 210 85 7 5 206 22 210 2.08e-51 171
MS.gene40438.t1 MTR_4g134460 52.288 153 68 3 8 159 56 204 2.27e-51 172
MS.gene40438.t1 MTR_7g085260 47.222 180 84 4 4 177 15 189 2.71e-51 171
MS.gene40438.t1 MTR_7g097090 52.941 153 64 3 4 154 8 154 4.68e-51 168
MS.gene40438.t1 MTR_4g089135 47.159 176 66 3 6 156 15 188 9.34e-51 169
MS.gene40438.t1 MTR_3g070030 45.178 197 99 4 4 197 17 207 2.05e-50 168
MS.gene40438.t1 MTR_7g005280 53.548 155 63 3 4 156 13 160 2.53e-50 165
MS.gene40438.t1 MTR_8g467490 42.632 190 95 4 8 185 16 203 6.95e-50 168
MS.gene40438.t1 MTR_5g040420 43.386 189 94 4 8 185 16 202 8.56e-50 167
MS.gene40438.t1 MTR_2g064470 47.953 171 84 3 1 170 6 172 2.37e-49 164
MS.gene40438.t1 MTR_2g086880 50.318 157 69 3 1 157 13 160 6.76e-49 168
MS.gene40438.t1 MTR_2g086880 52.667 150 62 3 8 157 20 160 1.23e-48 168
MS.gene40438.t1 MTR_7g011130 56.489 131 55 1 4 134 17 145 1.12e-46 158
MS.gene40438.t1 MTR_2g068880 46.061 165 73 3 8 157 24 187 3.08e-46 156
MS.gene40438.t1 MTR_4g075980 44.242 165 82 3 8 169 17 174 2.37e-44 151
MS.gene40438.t1 MTR_2g068920 44.848 165 75 3 8 157 23 186 4.77e-44 150
MS.gene40438.t1 MTR_7g011120 54.962 131 57 1 4 134 6 134 7.08e-44 150
MS.gene40438.t1 MTR_8g023840 51.656 151 64 5 6 153 11 155 1.08e-43 152
MS.gene40438.t1 MTR_5g090970 45.963 161 73 4 8 156 20 178 2.56e-43 149
MS.gene40438.t1 MTR_5g090970 45.342 161 73 4 8 156 20 177 2.33e-42 146
MS.gene40438.t1 MTR_8g023860 50.331 151 66 5 6 153 12 156 3.94e-42 148
MS.gene40438.t1 MTR_3g070040 49.007 151 68 3 10 156 12 157 9.71e-42 145
MS.gene40438.t1 MTR_8g023900 46.429 168 83 5 6 170 12 175 4.77e-40 143
MS.gene40438.t1 MTR_8g023900 36.214 243 128 9 1 225 184 417 3.33e-37 136
MS.gene40438.t1 MTR_8g099750 44.785 163 77 4 6 159 14 172 2.07e-38 133
MS.gene40438.t1 MTR_8g023930 46.753 154 73 5 6 156 24 171 9.88e-38 137
MS.gene40438.t1 MTR_2g086690 36.574 216 119 7 7 209 5 215 1.27e-37 132
MS.gene40438.t1 MTR_4g052620 41.875 160 86 4 6 158 5 164 4.78e-36 128
MS.gene40438.t1 MTR_7g105170 41.718 163 85 6 5 157 3 165 8.67e-35 125
MS.gene40438.t1 MTR_3g098810 42.236 161 79 3 6 156 14 170 1.86e-34 124
MS.gene40438.t1 MTR_3g098810 46.212 132 63 2 6 133 14 141 3.32e-33 118
MS.gene40438.t1 MTR_8g094580 53.000 100 42 3 63 158 8 106 5.48e-32 117
MS.gene40438.t1 MTR_4g094302 42.308 130 63 3 6 133 11 130 3.04e-29 107
MS.gene40438.t1 MTR_4g094302 36.875 160 83 4 6 157 11 160 3.13e-29 108
MS.gene40438.t1 MTR_8g023880 34.545 220 111 8 2 204 3 206 1.35e-27 106
MS.gene40438.t1 MTR_7g070140 49.383 81 39 2 56 134 12 92 3.53e-22 89.0
MS.gene40438.t1 MTR_8g093790 38.065 155 74 6 2 156 6 138 4.55e-22 90.1
MS.gene40438.t1 MTR_7g083330 34.437 151 93 4 6 155 18 163 2.28e-21 88.6
MS.gene40438.t1 MTR_3g096400 34.848 132 76 4 4 133 5 128 4.16e-18 80.1
MS.gene40438.t1 MTR_7g083360 34.884 129 80 3 4 131 8 133 1.93e-17 77.0
MS.gene40438.t1 MTR_7g083370 33.088 136 83 4 6 138 10 140 2.01e-17 76.6
MS.gene40438.t1 MTR_7g070150 51.923 52 22 1 105 156 9 57 9.59e-14 65.5
MS.gene40438.t1 MTR_7g116460 33.117 154 89 9 12 157 11 158 6.68e-12 63.2
MS.gene40438.t1 MTR_1g087190 57.778 45 18 1 8 51 7 51 2.88e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40438.t1 AT3G17730 76.349 241 43 5 1 228 1 240 9.11e-131 369
MS.gene40438.t1 AT1G65910 56.667 240 85 3 1 221 1 240 3.42e-92 283
MS.gene40438.t1 AT5G17260 59.244 238 69 6 1 217 1 231 2.92e-91 277
MS.gene40438.t1 AT3G03200 77.707 157 34 1 1 156 1 157 1.71e-88 270
MS.gene40438.t1 AT1G54330 72.611 157 40 1 1 157 1 154 2.27e-79 241
MS.gene40438.t1 AT5G46590 64.103 156 54 2 6 159 6 161 5.68e-71 219
MS.gene40438.t1 AT4G17980 62.733 161 56 2 1 157 1 161 9.95e-70 215
MS.gene40438.t1 AT4G17980 62.733 161 56 2 1 157 1 161 1.61e-69 215
MS.gene40438.t1 AT5G46590 67.391 138 40 2 6 142 6 139 1.92e-66 207
MS.gene40438.t1 AT3G10480 61.635 159 61 0 1 159 22 180 2.14e-66 212
MS.gene40438.t1 AT3G10490 63.226 155 56 1 6 159 27 181 5.76e-66 204
MS.gene40438.t1 AT3G10480 61.875 160 60 1 1 159 22 181 1.11e-65 210
MS.gene40438.t1 AT1G32510 55.319 188 69 4 6 184 6 187 1.39e-65 205
MS.gene40438.t1 AT3G10490 62.420 157 58 1 4 159 25 181 3.53e-64 206
MS.gene40438.t1 AT3G10500 58.929 168 67 2 2 168 5 171 9.11e-63 205
MS.gene40438.t1 AT5G04410 57.485 167 71 0 2 168 5 171 1.11e-62 205
MS.gene40438.t1 AT4G35580 57.407 162 64 1 6 162 9 170 5.02e-62 202
MS.gene40438.t1 AT4G35580 57.407 162 64 1 6 162 9 170 5.21e-62 202
MS.gene40438.t1 AT4G35580 57.407 162 64 1 6 162 9 170 5.39e-62 202
MS.gene40438.t1 AT1G33060 58.333 156 65 0 1 156 19 174 1.40e-61 204
MS.gene40438.t1 AT1G33060 58.333 156 65 0 1 156 19 174 1.52e-61 204
MS.gene40438.t1 AT4G10350 49.727 183 91 1 5 186 8 190 3.68e-61 195
MS.gene40438.t1 AT1G69490 46.465 198 100 3 6 199 9 204 6.84e-61 192
MS.gene40438.t1 AT3G10480 52.332 193 58 2 1 159 22 214 1.29e-60 199
MS.gene40438.t1 AT5G64060 53.571 168 78 0 1 168 1 168 3.63e-59 191
MS.gene40438.t1 AT1G71930 48.500 200 94 5 5 200 8 202 5.32e-59 189
MS.gene40438.t1 AT1G71930 48.500 200 94 5 5 200 8 202 5.32e-59 189
MS.gene40438.t1 AT1G12260 53.947 152 67 2 6 156 7 156 8.47e-59 189
MS.gene40438.t1 AT1G62700 55.263 152 65 2 6 156 7 156 1.45e-58 190
MS.gene40438.t1 AT1G62700 55.263 152 65 2 6 156 7 156 1.45e-58 190
MS.gene40438.t1 AT1G12260 53.947 152 67 2 6 156 7 156 1.72e-58 190
MS.gene40438.t1 AT5G09330 57.595 158 67 0 1 158 1 158 2.55e-58 192
MS.gene40438.t1 AT5G09330 57.595 158 67 0 1 158 1 158 2.55e-58 192
MS.gene40438.t1 AT5G09330 57.595 158 67 0 1 158 1 158 2.55e-58 192
MS.gene40438.t1 AT5G09330 57.595 158 67 0 1 158 1 158 2.55e-58 192
MS.gene40438.t1 AT5G09330 57.595 158 67 0 1 158 1 158 2.55e-58 192
MS.gene40438.t1 AT1G33280 54.487 156 67 2 5 159 7 159 3.50e-58 187
MS.gene40438.t1 AT2G24430 59.740 154 57 3 5 156 15 165 5.40e-58 186
MS.gene40438.t1 AT2G24430 59.740 154 57 3 5 156 15 165 5.40e-58 186
MS.gene40438.t1 AT2G18060 54.430 158 67 3 1 156 4 158 7.50e-58 187
MS.gene40438.t1 AT2G18060 54.430 158 67 3 1 156 4 158 7.50e-58 187
MS.gene40438.t1 AT4G36160 55.556 153 63 3 6 156 14 163 1.52e-57 187
MS.gene40438.t1 AT4G36160 55.556 153 63 3 6 156 10 159 1.79e-57 187
MS.gene40438.t1 AT4G36160 55.556 153 63 3 6 156 10 159 1.79e-57 187
MS.gene40438.t1 AT3G61910 48.851 174 71 3 6 163 11 182 2.24e-57 186
MS.gene40438.t1 AT1G34190 55.280 161 72 0 8 168 18 178 4.50e-57 190
MS.gene40438.t1 AT5G66300 56.494 154 63 3 5 156 11 162 5.29e-57 183
MS.gene40438.t1 AT1G79580 56.774 155 62 3 4 156 15 166 6.17e-57 185
MS.gene40438.t1 AT1G79580 56.774 155 62 3 4 156 15 166 6.17e-57 185
MS.gene40438.t1 AT1G79580 56.774 155 62 3 4 156 15 166 6.17e-57 185
MS.gene40438.t1 AT1G79580 56.774 155 62 3 4 156 15 166 6.17e-57 185
MS.gene40438.t1 AT1G79580 56.774 155 62 3 4 156 15 166 6.17e-57 185
MS.gene40438.t1 AT5G24590 47.895 190 97 2 1 188 8 197 7.00e-57 187
MS.gene40438.t1 AT1G76420 52.907 172 76 3 5 174 21 189 7.34e-57 184
MS.gene40438.t1 AT2G46770 49.180 183 75 5 6 172 16 196 1.38e-56 184
MS.gene40438.t1 AT5G39610 54.777 157 67 2 4 158 18 172 2.53e-56 181
MS.gene40438.t1 AT1G34180 54.037 161 74 0 8 168 18 178 2.64e-56 186
MS.gene40438.t1 AT1G61110 51.515 165 65 3 6 157 16 178 7.26e-56 181
MS.gene40438.t1 AT3G18400 54.605 152 66 2 5 156 4 152 8.68e-56 181
MS.gene40438.t1 AT5G07680 56.129 155 64 2 6 158 3 155 9.62e-56 181
MS.gene40438.t1 AT1G34180 54.037 161 74 0 8 168 18 178 1.21e-55 187
MS.gene40438.t1 AT5G07680 56.129 155 64 2 6 158 17 169 1.51e-55 181
MS.gene40438.t1 AT4G27410 49.359 156 77 1 1 156 9 162 4.33e-55 178
MS.gene40438.t1 AT3G15500 50.641 156 75 1 1 156 9 162 4.49e-55 179
MS.gene40438.t1 AT3G15170 55.000 160 66 3 6 161 20 177 5.79e-55 179
MS.gene40438.t1 AT3G04070 49.091 165 70 3 5 157 9 171 8.07e-55 179
MS.gene40438.t1 AT1G32770 50.617 162 69 2 6 156 16 177 1.33e-54 179
MS.gene40438.t1 AT5G61430 54.839 155 66 2 6 158 16 168 1.87e-54 178
MS.gene40438.t1 AT3G29035 54.902 153 65 2 4 154 22 172 4.47e-54 176
MS.gene40438.t1 AT1G52890 50.000 156 76 1 1 156 9 162 4.55e-54 176
MS.gene40438.t1 AT3G04070 46.927 179 65 4 6 156 10 186 9.80e-54 177
MS.gene40438.t1 AT3G12977 47.674 172 87 2 1 171 13 182 1.27e-53 174
MS.gene40438.t1 AT1G01720 52.866 157 67 3 6 158 7 160 1.36e-53 174
MS.gene40438.t1 AT5G62380 50.000 156 75 2 2 156 3 156 1.91e-53 176
MS.gene40438.t1 AT5G62380 50.000 156 75 2 2 156 3 156 1.91e-53 176
MS.gene40438.t1 AT3G49530 50.955 157 76 1 1 156 8 164 2.53e-53 177
MS.gene40438.t1 AT5G08790 51.235 162 71 3 2 158 3 161 3.01e-53 173
MS.gene40438.t1 AT3G49530 50.955 157 76 1 1 156 8 164 4.91e-53 178
MS.gene40438.t1 AT1G34180 50.289 173 74 1 8 168 18 190 5.28e-53 177
MS.gene40438.t1 AT1G34180 50.289 173 74 1 8 168 18 190 1.95e-52 178
MS.gene40438.t1 AT5G18270 54.140 157 67 3 4 157 19 173 3.68e-52 172
MS.gene40438.t1 AT5G53950 53.125 160 69 3 6 161 17 174 4.89e-52 173
MS.gene40438.t1 AT5G18270 53.503 157 68 3 4 157 19 173 8.77e-52 171
MS.gene40438.t1 AT2G02450 50.980 153 70 3 8 159 53 201 1.26e-51 172
MS.gene40438.t1 AT4G27410 45.614 171 78 2 1 156 9 179 1.43e-51 170
MS.gene40438.t1 AT1G77450 38.750 240 133 6 6 237 10 243 1.53e-51 168
MS.gene40438.t1 AT2G02450 50.980 153 70 3 8 159 53 201 1.98e-51 172
MS.gene40438.t1 AT5G63790 39.914 233 116 6 4 222 48 270 4.79e-51 169
MS.gene40438.t1 AT5G63790 39.914 233 116 6 4 222 58 280 5.39e-51 169
MS.gene40438.t1 AT1G56010 47.458 177 81 5 1 170 14 185 9.60e-51 168
MS.gene40438.t1 AT1G32870 54.217 166 72 2 5 168 9 172 9.66e-51 173
MS.gene40438.t1 AT3G15510 47.953 171 74 3 10 167 21 189 1.12e-50 169
MS.gene40438.t1 AT1G32870 54.217 166 72 2 5 168 9 172 1.17e-50 173
MS.gene40438.t1 AT1G32870 54.217 166 72 2 5 168 45 208 1.89e-50 173
MS.gene40438.t1 AT2G33480 50.993 151 69 1 6 156 15 160 5.47e-50 164
MS.gene40438.t1 AT3G04060 52.532 158 70 3 4 158 18 173 6.67e-50 166
MS.gene40438.t1 AT5G22290 50.685 146 65 2 8 153 23 161 1.25e-49 166
MS.gene40438.t1 AT5G39820 41.818 220 96 6 8 203 22 233 1.98e-49 165
MS.gene40438.t1 AT1G26870 42.932 191 96 3 6 185 16 204 8.42e-49 166
MS.gene40438.t1 AT2G33480 50.331 151 68 2 6 156 15 158 3.01e-48 160
MS.gene40438.t1 AT3G44290 51.370 146 63 3 8 153 16 153 1.01e-47 157
MS.gene40438.t1 AT2G27300 49.032 155 71 2 1 155 9 155 1.13e-47 160
MS.gene40438.t1 AT5G13180 51.634 153 66 3 6 156 14 160 3.97e-47 157
MS.gene40438.t1 AT3G44290 51.370 146 63 3 8 153 16 153 5.66e-47 159
MS.gene40438.t1 AT4G28530 50.000 170 59 6 6 156 10 172 1.41e-46 158
MS.gene40438.t1 AT2G17040 40.930 215 99 8 8 206 8 210 2.03e-46 155
MS.gene40438.t1 AT2G43000 48.667 150 74 2 8 156 20 167 2.91e-46 155
MS.gene40438.t1 AT1G52880 50.625 160 65 4 10 157 21 178 5.83e-46 155
MS.gene40438.t1 AT5G04395 50.000 142 57 2 6 133 28 169 3.41e-42 142
MS.gene40438.t1 AT3G12977 51.818 110 52 1 63 171 20 129 1.02e-36 129
MS.gene40438.t1 AT3G12910 42.169 166 76 4 8 156 23 185 2.12e-35 128
MS.gene40438.t1 AT4G10350 45.968 124 67 0 63 186 20 143 4.02e-35 127
MS.gene40438.t1 AT5G61430 58.163 98 39 1 63 158 8 105 6.16e-35 125
MS.gene40438.t1 AT1G56010 51.754 114 46 3 63 170 8 118 2.30e-33 121
MS.gene40438.t1 AT4G01550 45.395 152 74 5 9 156 7 153 4.90e-32 122
MS.gene40438.t1 AT5G22380 39.490 157 88 4 9 158 8 164 3.26e-31 115
MS.gene40438.t1 AT4G01520 43.939 132 69 3 7 133 5 136 7.02e-31 116
MS.gene40438.t1 AT3G44350 37.975 158 93 4 6 158 5 162 4.59e-30 112
MS.gene40438.t1 AT2G33480 51.042 96 47 0 61 156 8 103 6.46e-30 111
MS.gene40438.t1 AT4G01540 43.077 130 69 3 9 133 7 136 9.09e-29 112
MS.gene40438.t1 AT4G01540 43.077 130 69 3 9 133 7 136 1.27e-28 111
MS.gene40438.t1 AT4G01540 43.077 130 69 3 9 133 7 136 1.45e-28 112
MS.gene40438.t1 AT4G01540 43.077 130 69 3 9 133 7 136 1.62e-28 112
MS.gene40438.t1 AT4G28530 50.909 110 34 3 6 98 10 116 3.92e-28 108
MS.gene40438.t1 AT3G10490 62.500 80 29 1 81 159 2 81 3.37e-27 107
MS.gene40438.t1 AT3G10490 62.500 80 29 1 81 159 2 81 3.37e-27 107
MS.gene40438.t1 AT3G44350 41.985 131 72 3 6 132 5 135 6.19e-27 102
MS.gene40438.t1 AT3G04420 36.774 155 91 3 7 159 4 153 1.17e-26 104
MS.gene40438.t1 AT1G02230 40.789 152 78 7 7 153 4 148 1.18e-26 105
MS.gene40438.t1 AT3G04420 36.774 155 91 3 7 159 4 153 2.51e-26 104
MS.gene40438.t1 AT5G64530 33.702 181 88 6 4 168 1 165 4.26e-26 100
MS.gene40438.t1 AT5G64530 39.552 134 65 4 4 135 1 120 1.58e-25 98.2
MS.gene40438.t1 AT1G02250 36.601 153 83 5 7 153 4 148 1.97e-23 97.4
MS.gene40438.t1 AT1G01010 38.462 156 77 5 9 153 6 153 3.34e-23 97.4
MS.gene40438.t1 AT3G56530 31.373 153 100 3 4 154 50 199 2.26e-22 93.6
MS.gene40438.t1 AT1G02220 35.484 155 90 4 7 159 4 150 9.38e-22 93.2
MS.gene40438.t1 AT2G43000 46.591 88 46 1 70 156 2 89 1.29e-20 86.7
MS.gene40438.t1 AT3G55210 31.481 162 93 4 6 154 11 167 1.75e-20 87.8
MS.gene40438.t1 AT2G18060 51.389 72 31 2 86 156 2 70 7.66e-19 83.6
MS.gene40438.t1 AT5G22290 50.746 67 27 1 87 153 2 62 1.68e-16 76.3
MS.gene40438.t1 AT5G50820 33.333 132 74 4 6 133 17 138 2.55e-16 75.1
MS.gene40438.t1 AT5G14000 31.538 130 83 2 6 133 15 140 3.47e-15 70.9
MS.gene40438.t1 AT5G14000 29.032 155 101 3 6 158 15 162 5.50e-15 71.6
MS.gene40438.t1 AT3G04430 33.835 133 74 5 12 132 6 136 4.67e-14 68.9

Find 46 sgRNAs with CRISPR-Local

Find 192 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCATTTCACATTCATTAT+TGG 0.178148 6.2:+76072476 None:intergenic
TTGGATTACCACCAGGTTTC+AGG 0.179522 6.2:-76076597 MS.gene40438:CDS
TTCATTATTGGTTATGGTTT+GGG 0.265485 6.2:+76072488 None:intergenic
CTATTTGTTCTAAATCCATT+AGG 0.266100 6.2:+76075605 None:intergenic
TTCACATTCATTATTGGTTA+TGG 0.271178 6.2:+76072482 None:intergenic
GATGATGCTCCTAGTACTTC+TGG 0.277546 6.2:+76072450 None:intergenic
TCATACCAATAGGTCTGTTT+TGG 0.299769 6.2:+76075528 None:intergenic
ATTCATTATTGGTTATGGTT+TGG 0.312843 6.2:+76072487 None:intergenic
TATTTGTTCTAAATCCATTA+GGG 0.345822 6.2:+76075606 None:intergenic
TGAGGACAATACTGGCTTAC+AGG 0.364169 6.2:-76075414 MS.gene40438:intron
GAGCAACAAGAGCAGGATAC+TGG 0.370822 6.2:-76075583 MS.gene40438:CDS
CTCAAGGAATTCGAACTGAT+TGG 0.371866 6.2:-76075472 MS.gene40438:CDS
AAGAAGACAAAGATGATTCA+TGG 0.372181 6.2:-76072413 MS.gene40438:CDS
AAATGGAATCTGTTCTGATA+TGG 0.374346 6.2:-76072553 MS.gene40438:CDS
TCATGCCAAAACAGACCTAT+TGG 0.385273 6.2:-76075533 MS.gene40438:CDS
AAGACATTGGTTTACTATAG+AGG 0.419530 6.2:-76075503 MS.gene40438:CDS
CATTTATAAAGATCAACTTC+AGG 0.421834 6.2:+76076493 None:intergenic
TCTTTATAAATGTGAACCTT+GGG 0.434445 6.2:-76076482 MS.gene40438:CDS
ATCTTTATAAATGTGAACCT+TGG 0.436895 6.2:-76076483 MS.gene40438:CDS
TCAAGGAATTCGAACTGATT+GGG 0.449710 6.2:-76075471 MS.gene40438:CDS
CGGGACCGAAAATACCCTAA+TGG 0.459128 6.2:-76075620 MS.gene40438:CDS
TTGACAAGTTCTTCATCAGT+TGG 0.460855 6.2:+76076568 None:intergenic
AAAGAGTGTGAGGACAATAC+TGG 0.463279 6.2:-76075422 MS.gene40438:CDS
AATGTCTTCTTCATACCAAT+AGG 0.469539 6.2:+76075518 None:intergenic
ACAAATAGAGCAACAAGAGC+AGG 0.482385 6.2:-76075590 MS.gene40438:CDS
AAGAAAATTATGTCACCAGT+TGG 0.490536 6.2:-76076616 None:intergenic
ATTTCTTCACCACCAACCAT+TGG 0.521704 6.2:+76072348 None:intergenic
AAACCTGGTGGTAATCCAAC+TGG 0.525177 6.2:+76076601 None:intergenic
TACCACTCTGGATCTCTACT+TGG 0.542100 6.2:+76075656 None:intergenic
TCTAATACACCAATGGTTGG+TGG 0.556914 6.2:-76072357 MS.gene40438:CDS
TGTGAACCTTGGGAATTAGC+AGG 0.558601 6.2:-76076472 MS.gene40438:intron
GTATTCTTCTAATACACCAA+TGG 0.568650 6.2:-76072364 MS.gene40438:CDS
ATGATGTCTCCAGAAGTACT+AGG 0.577166 6.2:-76072459 MS.gene40438:CDS
TATTGGTATGAAGAAGACAT+TGG 0.580527 6.2:-76075516 MS.gene40438:CDS
TCTTCTAATACACCAATGGT+TGG 0.588359 6.2:-76072360 MS.gene40438:CDS
GCAGGATACTGGAAATCTAC+CGG 0.591478 6.2:-76075572 MS.gene40438:CDS
TATGGACCTGCTAATTCCCA+AGG 0.609085 6.2:+76076466 None:intergenic
TCACCAGTTGGATTACCACC+AGG 0.611908 6.2:-76076604 MS.gene40438:CDS
CAATCAGTTCGAATTCCTTG+AGG 0.624122 6.2:+76075473 None:intergenic
TATAGAGGAAGAGCTCCTCA+AGG 0.649242 6.2:-76075488 MS.gene40438:CDS
TCTTGATGATAAAGAGTGTG+AGG 0.653615 6.2:-76075432 MS.gene40438:CDS
AATTCATTACAGAAGATGCA+TGG 0.663634 6.2:-76072386 MS.gene40438:CDS
GTTGGATGAAACCTGAAACC+TGG 0.669872 6.2:+76076586 None:intergenic
TCTGATATGGAAGAGCAACA+AGG 0.679765 6.2:-76072540 MS.gene40438:CDS
TGCCAAGTAGAGATCCAGAG+TGG 0.689238 6.2:-76075658 MS.gene40438:CDS
GGATGAAACCTGAAACCTGG+TGG 0.791381 6.2:+76076589 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATTAAAAAAGTGATA+TGG + chr6.2:76074967-76074986 None:intergenic 10.0%
!! ATTGAAAAATGAAAATAAAA+TGG + chr6.2:76072556-76072575 None:intergenic 10.0%
!! TATTATATTATCTTAGAATT+TGG + chr6.2:76075779-76075798 None:intergenic 10.0%
!!! TTATTTTCATTTATCAAATT+TGG - chr6.2:76072500-76072519 MS.gene40438:CDS 10.0%
!! AAATATCACATTATTAAACA+TGG - chr6.2:76072674-76072693 MS.gene40438:intron 15.0%
!! CTTAAATTAATTTATTCTGA+TGG - chr6.2:76073213-76073232 MS.gene40438:intron 15.0%
!! GGATAATATATTAAAAATTG+TGG + chr6.2:76074100-76074119 None:intergenic 15.0%
!! TAAATGTGTTAAAATCATAT+AGG + chr6.2:76075919-76075938 None:intergenic 15.0%
!! TCCATAATAAAATGAAAAAA+GGG - chr6.2:76075197-76075216 MS.gene40438:intron 15.0%
!! TGAAAATTATCTAATTTCAT+AGG - chr6.2:76072753-76072772 MS.gene40438:intron 15.0%
!! TTTAACGTTGTTTAAATATA+TGG + chr6.2:76074321-76074340 None:intergenic 15.0%
!!! AACACATTTAATATGATTTT+AGG - chr6.2:76075929-76075948 MS.gene40438:intron 15.0%
!!! ATTTTCATTTTTCAATATCA+TGG - chr6.2:76072560-76072579 MS.gene40438:CDS 15.0%
!!! TAGATAATTTTCATGTTTTT+AGG + chr6.2:76072746-76072765 None:intergenic 15.0%
!!! TATAGTTGATAGAATTTTAT+TGG - chr6.2:76073983-76074002 MS.gene40438:intron 15.0%
!!! TGTTCAAATACATAATTTTA+AGG + chr6.2:76074186-76074205 None:intergenic 15.0%
!!! TTTTCATTTTTCAATATCAT+GGG - chr6.2:76072561-76072580 MS.gene40438:CDS 15.0%
!! AAAAAAACTTTGTCATATAG+AGG + chr6.2:76074842-76074861 None:intergenic 20.0%
!! AATTAGCTGAAAACAATTTA+TGG - chr6.2:76075523-76075542 MS.gene40438:CDS 20.0%
!! ACATTGATATAAATCATGTT+TGG - chr6.2:76075345-76075364 MS.gene40438:intron 20.0%
!! AGAAATAAAACTATACTACT+AGG + chr6.2:76074724-76074743 None:intergenic 20.0%
!! AGTTATATGATAAGTGTTAA+TGG + chr6.2:76076086-76076105 None:intergenic 20.0%
!! ATCAAGAAAATACCTAAAAA+TGG - chr6.2:76073706-76073725 MS.gene40438:intron 20.0%
!! ATTAAAAACCAACGATAATT+TGG + chr6.2:76074347-76074366 None:intergenic 20.0%
!! CTCCATAATAAAATGAAAAA+AGG - chr6.2:76075196-76075215 MS.gene40438:intron 20.0%
!! TAAGTTATCCTAAAAACTTA+TGG - chr6.2:76075499-76075518 MS.gene40438:CDS 20.0%
!! TATAGTACATTAAATTCCTT+AGG + chr6.2:76074626-76074645 None:intergenic 20.0%
!! TATATAACTTTGTCATATAG+AGG + chr6.2:76074879-76074898 None:intergenic 20.0%
!! TATCTAAAGAGAAAAATCAA+TGG - chr6.2:76072389-76072408 MS.gene40438:CDS 20.0%
!! TGAAAATTCTCTAATTTCAT+AGG - chr6.2:76072720-76072739 MS.gene40438:intron 20.0%
!!! AATCATTTAAAGCATTTGAT+TGG + chr6.2:76075247-76075266 None:intergenic 20.0%
!!! ATATATTATCCACAATTTTC+AGG - chr6.2:76074109-76074128 MS.gene40438:intron 20.0%
!!! ATCAAATGCTTTAAATGATT+AGG - chr6.2:76075247-76075266 MS.gene40438:intron 20.0%
!!! GGAAATTTTAAGATACTTTT+AGG + chr6.2:76075835-76075854 None:intergenic 20.0%
!!! GTTTAATTTCATATTGTAGA+TGG - chr6.2:76074019-76074038 MS.gene40438:intron 20.0%
!!! GTTTTTTCAGATCAAATATA+TGG + chr6.2:76074501-76074520 None:intergenic 20.0%
!!! TATTTGTTCTAAATCCATTA+GGG + chr6.2:76073327-76073346 None:intergenic 20.0%
!!! TCCCTTTTTTCATTTTATTA+TGG + chr6.2:76075201-76075220 None:intergenic 20.0%
!!! TTAATTTTTTTGAGTGACAT+TGG - chr6.2:76074985-76075004 MS.gene40438:intron 20.0%
!!! TTATGTTTGATGCTTTTTAT+TGG + chr6.2:76073850-76073869 None:intergenic 20.0%
! AAAAATTGCAGGAAAATATG+TGG - chr6.2:76072873-76072892 MS.gene40438:intron 25.0%
! AAGAAAAGAGTTATGAAAGT+AGG + chr6.2:76074455-76074474 None:intergenic 25.0%
! AAGATAGAATCATAGTGTAT+AGG + chr6.2:76076009-76076028 None:intergenic 25.0%
! AATGGTTAATGAATCTAACA+AGG + chr6.2:76074282-76074301 None:intergenic 25.0%
! AATTTAAGAACTTAGCCTAA+TGG + chr6.2:76073201-76073220 None:intergenic 25.0%
! ACAAAATGAAAGTGATAGAT+AGG + chr6.2:76075116-76075135 None:intergenic 25.0%
! ATACCTAAAAATGGTTTCAT+TGG - chr6.2:76073715-76073734 MS.gene40438:intron 25.0%
! ATATATACACCTGAAAATTG+TGG + chr6.2:76074121-76074140 None:intergenic 25.0%
! ATCAAAGAGTTCAGTTAATT+TGG - chr6.2:76074645-76074664 MS.gene40438:intron 25.0%
! ATCTTTATAAATGTGAACCT+TGG - chr6.2:76072447-76072466 MS.gene40438:CDS 25.0%
! CATCATTTCACATTCATTAT+TGG + chr6.2:76076457-76076476 None:intergenic 25.0%
! CATTTATAAAGATCAACTTC+AGG + chr6.2:76072440-76072459 None:intergenic 25.0%
! CTAAATGTATTGTAATCAAG+TGG + chr6.2:76075856-76075875 None:intergenic 25.0%
! GGAGTTTATATAGTATCTAT+TGG + chr6.2:76075180-76075199 None:intergenic 25.0%
! TATAATGTACTCAACAATTG+AGG + chr6.2:76075955-76075974 None:intergenic 25.0%
! TCATGATTAATTACGTCAAA+TGG - chr6.2:76074236-76074255 MS.gene40438:intron 25.0%
! TCTTTATAAATGTGAACCTT+GGG - chr6.2:76072448-76072467 MS.gene40438:CDS 25.0%
! TTATTTAGAGAGTAGTGATA+TGG + chr6.2:76073065-76073084 None:intergenic 25.0%
! TTGATATTGCTAAAAATTGC+AGG - chr6.2:76072862-76072881 MS.gene40438:intron 25.0%
!! ATGTGTATGTATTTTCCATT+AGG - chr6.2:76073183-76073202 MS.gene40438:intron 25.0%
!! ATTCATTATTGGTTATGGTT+TGG + chr6.2:76076446-76076465 None:intergenic 25.0%
!! CTATTTGTTCTAAATCCATT+AGG + chr6.2:76073328-76073347 None:intergenic 25.0%
!! GCTAATTTCCATAAGTTTTT+AGG + chr6.2:76075510-76075529 None:intergenic 25.0%
!! GGTATTTTCTTGATCATTTT+TGG + chr6.2:76073700-76073719 None:intergenic 25.0%
!! TTCACATTCATTATTGGTTA+TGG + chr6.2:76076451-76076470 None:intergenic 25.0%
!! TTCATAACTCTTTTCTTTGT+GGG - chr6.2:76074458-76074477 MS.gene40438:intron 25.0%
!! TTCATTATTGGTTATGGTTT+GGG + chr6.2:76076445-76076464 None:intergenic 25.0%
!! TTTCATAACTCTTTTCTTTG+TGG - chr6.2:76074457-76074476 MS.gene40438:intron 25.0%
!!! AAAACTGACTTCTAAAATGA+GGG + chr6.2:76075734-76075753 None:intergenic 25.0%
!!! TAAAACTGACTTCTAAAATG+AGG + chr6.2:76075735-76075754 None:intergenic 25.0%
!!! TAAATCCATTAGGGTATTTT+CGG + chr6.2:76073318-76073337 None:intergenic 25.0%
!!! TGCAATTTTTAGCAATATCA+AGG + chr6.2:76072863-76072882 None:intergenic 25.0%
!!! TTCTGATGGAAACATTTTTT+TGG - chr6.2:76073227-76073246 MS.gene40438:intron 25.0%
!!! TTGAACTTAAAACTAGTCTT+TGG - chr6.2:76074404-76074423 MS.gene40438:intron 25.0%
AAAAACCAACGATAATTTGG+AGG + chr6.2:76074344-76074363 None:intergenic 30.0%
AAATGGAATCTGTTCTGATA+TGG - chr6.2:76076377-76076396 MS.gene40438:intron 30.0%
AAGAAGACAAAGATGATTCA+TGG - chr6.2:76076517-76076536 MS.gene40438:CDS 30.0%
AAGTGATATGGATCATAAGT+AGG + chr6.2:76074955-76074974 None:intergenic 30.0%
AATGTCTTCTTCATACCAAT+AGG + chr6.2:76073415-76073434 None:intergenic 30.0%
AATTCATTACAGAAGATGCA+TGG - chr6.2:76076544-76076563 MS.gene40438:CDS 30.0%
AGAGTTATGAAAGTAGGTAA+AGG + chr6.2:76074449-76074468 None:intergenic 30.0%
AGTAAATAACCTTGAACCTA+AGG - chr6.2:76074607-76074626 MS.gene40438:intron 30.0%
ATCTTACTTTAGCACTACTT+AGG - chr6.2:76076024-76076043 MS.gene40438:intron 30.0%
ATTCAATGACAAACACTTGT+GGG + chr6.2:76076271-76076290 None:intergenic 30.0%
ATTCTTCTCATAATCCATGA+AGG - chr6.2:76075057-76075076 MS.gene40438:intron 30.0%
CAATGCAAATAACTTCAACA+AGG + chr6.2:76073907-76073926 None:intergenic 30.0%
CATTAAATTCCTTAGGTTCA+AGG + chr6.2:76074619-76074638 None:intergenic 30.0%
CTTATGCCATATAAGTATCT+AGG + chr6.2:76075291-76075310 None:intergenic 30.0%
GTATTCTTCTAATACACCAA+TGG - chr6.2:76076566-76076585 MS.gene40438:CDS 30.0%
TATTCAATGACAAACACTTG+TGG + chr6.2:76076272-76076291 None:intergenic 30.0%
TATTGGTATGAAGAAGACAT+TGG - chr6.2:76073414-76073433 MS.gene40438:intron 30.0%
TTAAACCTCCAAATTATCGT+TGG - chr6.2:76074336-76074355 MS.gene40438:intron 30.0%
TTTGTGGCATAAAGATTCAA+AGG + chr6.2:76075881-76075900 None:intergenic 30.0%
! CAGTTTTACAATGTTGAGTT+AGG - chr6.2:76075747-76075766 MS.gene40438:intron 30.0%
! CTATCACTTTCATTTTGTGT+CGG - chr6.2:76075118-76075137 MS.gene40438:intron 30.0%
! TGAAACTTTTCTGTCTTTAC+CGG + chr6.2:76073380-76073399 None:intergenic 30.0%
!! AAGACATTGGTTTACTATAG+AGG - chr6.2:76073427-76073446 MS.gene40438:intron 30.0%
!! AATTCTGAAACCATGATTCT+AGG + chr6.2:76072812-76072831 None:intergenic 30.0%
!!! ATAGACACTTTTGAGACTAT+GGG + chr6.2:76075690-76075709 None:intergenic 30.0%
!!! ATCCTCTACAACTAGTTTTA+CGG + chr6.2:76073635-76073654 None:intergenic 30.0%
!!! GATACTTTTAGGTTATTGAG+AGG + chr6.2:76075824-76075843 None:intergenic 30.0%
!!! TATAGACACTTTTGAGACTA+TGG + chr6.2:76075691-76075710 None:intergenic 30.0%
ACAACGCTAAGAAACACAAT+AGG - chr6.2:76072991-76073010 MS.gene40438:intron 35.0%
ATACACACATCACACCAAAA+TGG + chr6.2:76073658-76073677 None:intergenic 35.0%
ATCAGTCTAGCACTTAATCA+TGG + chr6.2:76073964-76073983 None:intergenic 35.0%
ATCCTCTATCATCAGCTTTA+CGG - chr6.2:76073576-76073595 MS.gene40438:intron 35.0%
ATGAAAGTGATAGATAGGAC+AGG + chr6.2:76075111-76075130 None:intergenic 35.0%
ATTTCATAGGCCTAGAATCA+TGG - chr6.2:76072799-76072818 MS.gene40438:intron 35.0%
CATTGCATGCCTTAACATTA+TGG + chr6.2:76073761-76073780 None:intergenic 35.0%
CCTCAAAAACCTTTAGACTA+TGG - chr6.2:76072937-76072956 MS.gene40438:intron 35.0%
CGCGAATTTCCATAATGTTA+AGG - chr6.2:76073749-76073768 MS.gene40438:intron 35.0%
GAATCATGGTTTCAGAATTG+CGG - chr6.2:76072813-76072832 MS.gene40438:intron 35.0%
GACAATCTCTGATAAGTTTG+TGG + chr6.2:76075897-76075916 None:intergenic 35.0%
GAGTAGTGATATGGAAACTT+AGG + chr6.2:76073056-76073075 None:intergenic 35.0%
GGTAAATTATGTGCAGTGAA+TGG + chr6.2:76074300-76074319 None:intergenic 35.0%
TACGTCAAATGGATGATAAG+TGG - chr6.2:76074247-76074266 MS.gene40438:intron 35.0%
TCAAGGAATTCGAACTGATT+GGG - chr6.2:76073459-76073478 MS.gene40438:intron 35.0%
TCTTCTAATACACCAATGGT+TGG - chr6.2:76076570-76076589 MS.gene40438:CDS 35.0%
TGAGGTCCTAGATACTTATA+TGG - chr6.2:76075282-76075301 MS.gene40438:intron 35.0%
TGTCGTGTGTTCAAGAAAAA+TGG - chr6.2:76076360-76076379 MS.gene40438:intron 35.0%
TTGACAAGTTCTTCATCAGT+TGG + chr6.2:76072365-76072384 None:intergenic 35.0%
! ATGCTTTAAATGATTAGGCC+AGG - chr6.2:76075252-76075271 MS.gene40438:intron 35.0%
! CAGTTTTCCACGTTCTTTTA+CGG + chr6.2:76074672-76074691 None:intergenic 35.0%
! CCATAGTCTAAAGGTTTTTG+AGG + chr6.2:76072940-76072959 None:intergenic 35.0%
! TAGTTGTAGAGGATCCATTT+TGG - chr6.2:76073641-76073660 MS.gene40438:intron 35.0%
! TATAAGTATCTAGGACCTCA+TGG + chr6.2:76075282-76075301 None:intergenic 35.0%
! TCATACCAATAGGTCTGTTT+TGG + chr6.2:76073405-76073424 None:intergenic 35.0%
! TCTTGATGATAAAGAGTGTG+AGG - chr6.2:76073498-76073517 MS.gene40438:intron 35.0%
! TGCTTTAAATGATTAGGCCA+GGG - chr6.2:76075253-76075272 MS.gene40438:intron 35.0%
!! CGACCAATGAAACCATTTTT+AGG + chr6.2:76073721-76073740 None:intergenic 35.0%
!! GTCTCAAAAGTGTCTATAAG+CGG - chr6.2:76075693-76075712 MS.gene40438:intron 35.0%
AAAGAACGTGGAAAACTGCA+TGG - chr6.2:76074674-76074693 MS.gene40438:intron 40.0%
ACAAATAGAGCAACAAGAGC+AGG - chr6.2:76073340-76073359 MS.gene40438:intron 40.0%
AGTTCTTGCATCAAAGACCT+TGG - chr6.2:76072631-76072650 MS.gene40438:intron 40.0%
ATGAGGTGTACAAACCTTCA+TGG + chr6.2:76075074-76075093 None:intergenic 40.0%
ATTTCTTCACCACCAACCAT+TGG + chr6.2:76076585-76076604 None:intergenic 40.0%
ATTTGGACCGTAAAAGAACG+TGG - chr6.2:76074662-76074681 MS.gene40438:intron 40.0%
CAATCAGTTCGAATTCCTTG+AGG + chr6.2:76073460-76073479 None:intergenic 40.0%
CACCGTAAAACTAGTTGTAG+AGG - chr6.2:76073630-76073649 MS.gene40438:intron 40.0%
CTCAAGGAATTCGAACTGAT+TGG - chr6.2:76073458-76073477 MS.gene40438:intron 40.0%
GAAAGTAGGTAAAGGCCAAA+GGG + chr6.2:76074441-76074460 None:intergenic 40.0%
TCATGCCAAAACAGACCTAT+TGG - chr6.2:76073397-76073416 MS.gene40438:intron 40.0%
TCTAATACACCAATGGTTGG+TGG - chr6.2:76076573-76076592 MS.gene40438:CDS 40.0%
TCTGATATGGAAGAGCAACA+AGG - chr6.2:76076390-76076409 MS.gene40438:intron 40.0%
TGAAAGTAGGTAAAGGCCAA+AGG + chr6.2:76074442-76074461 None:intergenic 40.0%
! AAAGAGTGTGAGGACAATAC+TGG - chr6.2:76073508-76073527 MS.gene40438:intron 40.0%
! TTTGAGACTATGGGCATGTT+TGG + chr6.2:76075681-76075700 None:intergenic 40.0%
!! AGGAGAATTGCTGCTTTATG+AGG + chr6.2:76075091-76075110 None:intergenic 40.0%
!! ATGATGTCTCCAGAAGTACT+AGG - chr6.2:76076471-76076490 MS.gene40438:intron 40.0%
!! CAAACACTTGTGAGAGTGTT+TGG + chr6.2:76075631-76075650 None:intergenic 40.0%
!! GATCCAGAGTGGTACTTTTT+CGG - chr6.2:76073283-76073302 MS.gene40438:intron 40.0%
AAACCTGGTGGTAATCCAAC+TGG + chr6.2:76072332-76072351 None:intergenic 45.0%
AACGAGCTTGATTGCATTGC+AGG - chr6.2:76076323-76076342 MS.gene40438:intron 45.0%
CAAACACTTGTGGGACATGA+CGG + chr6.2:76076262-76076281 None:intergenic 45.0%
CACCGTAAAGCTGATGATAG+AGG + chr6.2:76073581-76073600 None:intergenic 45.0%
CATTGCAGAAAGTTGCACCA+AGG + chr6.2:76072651-76072670 None:intergenic 45.0%
GATGATGCTCCTAGTACTTC+TGG + chr6.2:76076483-76076502 None:intergenic 45.0%
GCAGGATACTGGAAATCTAC+CGG - chr6.2:76073358-76073377 MS.gene40438:intron 45.0%
GTTGGATGAAACCTGAAACC+TGG + chr6.2:76072347-76072366 None:intergenic 45.0%
TACCACTCTGGATCTCTACT+TGG + chr6.2:76073277-76073296 None:intergenic 45.0%
TATAGAGGAAGAGCTCCTCA+AGG - chr6.2:76073442-76073461 MS.gene40438:intron 45.0%
TATGGACCTGCTAATTCCCA+AGG + chr6.2:76072467-76072486 None:intergenic 45.0%
TGGTTTCAGAATTGCGGCTA+TGG - chr6.2:76072819-76072838 MS.gene40438:intron 45.0%
TGTGAACCTTGGGAATTAGC+AGG - chr6.2:76072458-76072477 MS.gene40438:CDS 45.0%
TTGGATTACCACCAGGTTTC+AGG - chr6.2:76072333-76072352 MS.gene40438:CDS 45.0%
!! CAAAGACTCGTGAGAGTGTT+TGG + chr6.2:76075579-76075598 None:intergenic 45.0%
!! TGAGGACAATACTGGCTTAC+AGG - chr6.2:76073516-76073535 MS.gene40438:intron 45.0%
!!! AGTGGTACTTTTTCGGACCA+CGG - chr6.2:76073290-76073309 MS.gene40438:intron 45.0%
!!! GGTTTTTGAGGTCTCCTCAA+AGG + chr6.2:76072928-76072947 None:intergenic 45.0%
!! AATAATATAAATAAAGAATA+TGG + chr6.2:76072485-76072504 None:intergenic 5.0%
!!! CTTTATATTTTTTTATTATA+AGG - chr6.2:76074775-76074794 MS.gene40438:intron 5.0%
AGGCAGTGCAACCACAATTG+CGG + chr6.2:76072908-76072927 None:intergenic 50.0%
CAATCGCGGCCATAGTCTAA+AGG + chr6.2:76072949-76072968 None:intergenic 50.0%
CGGGACCGAAAATACCCTAA+TGG - chr6.2:76073310-76073329 MS.gene40438:intron 50.0%
GAGCAACAAGAGCAGGATAC+TGG - chr6.2:76073347-76073366 MS.gene40438:intron 50.0%
GGATGAAACCTGAAACCTGG+TGG + chr6.2:76072344-76072363 None:intergenic 50.0%
TAAAGGCCAAAGGGTCAGGT+GGG + chr6.2:76074432-76074451 None:intergenic 50.0%
TAGGTAAAGGCCAAAGGGTC+AGG + chr6.2:76074436-76074455 None:intergenic 50.0%
TCACCAGTTGGATTACCACC+AGG - chr6.2:76072326-76072345 MS.gene40438:CDS 50.0%
TGCCAAGTAGAGATCCAGAG+TGG - chr6.2:76073272-76073291 MS.gene40438:intron 50.0%
TTAGACTATGGCCGCGATTG+TGG - chr6.2:76072949-76072968 MS.gene40438:intron 50.0%
TTGTGGTTGCACTGCCTTTG+AGG - chr6.2:76072911-76072930 MS.gene40438:intron 50.0%
! ATTAGGCCAGGGTATCCATG+AGG - chr6.2:76075264-76075283 MS.gene40438:intron 50.0%
!! GGTCCGAAAAAGTACCACTC+TGG + chr6.2:76073289-76073308 None:intergenic 50.0%
!! TTAGGGTATTTTCGGTCCCG+TGG + chr6.2:76073310-76073329 None:intergenic 50.0%
!!! GTGGTACTTTTTCGGACCAC+GGG - chr6.2:76073291-76073310 MS.gene40438:intron 50.0%
CTAGGACCTCATGGATACCC+TGG + chr6.2:76075273-76075292 None:intergenic 55.0%
GTAAAGGCCAAAGGGTCAGG+TGG + chr6.2:76074433-76074452 None:intergenic 55.0%
ATGGCCGCGATTGTGGTTGC+AGG - chr6.2:76072956-76072975 MS.gene40438:intron 60.0%
GCAGCCTGCAACCACAATCG+CGG + chr6.2:76072963-76072982 None:intergenic 60.0%
GGTCAGTGCAGCCGCAATTG+TGG - chr6.2:76072894-76072913 MS.gene40438:intron 60.0%
! TTGGTGCCCACCTGACCCTT+TGG - chr6.2:76074423-76074442 MS.gene40438:intron 60.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 76072323 76076629 76072323 ID=MS.gene40438
chr6.2 mRNA 76072323 76076629 76072323 ID=MS.gene40438.t1;Parent=MS.gene40438
chr6.2 exon 76076473 76076629 76076473 ID=MS.gene40438.t1.exon1;Parent=MS.gene40438.t1
chr6.2 CDS 76076473 76076629 76076473 ID=cds.MS.gene40438.t1;Parent=MS.gene40438.t1
chr6.2 exon 76075415 76075692 76075415 ID=MS.gene40438.t1.exon2;Parent=MS.gene40438.t1
chr6.2 CDS 76075415 76075692 76075415 ID=cds.MS.gene40438.t1;Parent=MS.gene40438.t1
chr6.2 exon 76072323 76072607 76072323 ID=MS.gene40438.t1.exon3;Parent=MS.gene40438.t1
chr6.2 CDS 76072323 76072607 76072323 ID=cds.MS.gene40438.t1;Parent=MS.gene40438.t1
Gene Sequence

>MS.gene40438

ATGTCACCAGTTGGATTACCACCAGGTTTCAGGTTTCATCCAACTGATGAAGAACTTGTCAATTATTATCTAAAGAGAAAAATCAATGGTCAAGAAATTGAACTTGATATAATTCCTGAAGTTGATCTTTATAAATGTGAACCTTGGGAATTAGCAGGTCCATATTCTTTATTTATATTATTTTCATTTATCAAATTTGGATTGCACATTCACATTTTTTTACTTTCTAACCATTTTATTTTCATTTTTCAATATCATGGGCAAGAAAATGTGTATATATGTCATTATCATTAATAATCTAGTTATGTAGTTCTTGCATCAAAGACCTTGGTGCAACTTTCTGCAATGTGAAAATATCACATTATTAAACATGGATTCAAAGTTTTATTTATAAACATGAAAATTCTCTAATTTCATAGGTCTAAAAACATGAAAATTATCTAATTTCATAGGCCTAAAAACATGAAAATTATCTAATTTCATAGGCCTAGAATCATGGTTTCAGAATTGCGGCTATGGTAGCAGTTATACTGTGAGCCTTGATATTGCTAAAAATTGCAGGAAAATATGTGGTCAGTGCAGCCGCAATTGTGGTTGCACTGCCTTTGAGGAGACCTCAAAAACCTTTAGACTATGGCCGCGATTGTGGTTGCAGGCTGCAATTTAGAACAACGCTAAGAAACACAATAGGATAGAAAATCTTTATGAGAAAACTACTTCAAAATTTGTACCTAAGTTTCCATATCACTACTCTCTAAATAATATGATAATTTTTGTTCTTCATTATAGAGATTTTCTTTAACTATTTTGATTTGTAACTCTTTTATTTTACATTATTCTTCACTTATCTATATACATATATGTGTATGTATTTTCCATTAGGCTAAGTTCTTAAATTAATTTATTCTGATGGAAACATTTTTTTGGAAATGTATAGAGAAATCATTTTTGCCAAGTAGAGATCCAGAGTGGTACTTTTTCGGACCACGGGACCGAAAATACCCTAATGGATTTAGAACAAATAGAGCAACAAGAGCAGGATACTGGAAATCTACCGGTAAAGACAGAAAAGTTTCATGCCAAAACAGACCTATTGGTATGAAGAAGACATTGGTTTACTATAGAGGAAGAGCTCCTCAAGGAATTCGAACTGATTGGGTTATGCATGAGTATCGTCTTGATGATAAAGAGTGTGAGGACAATACTGGCTTACAGGTATATACAACTTATATGTATACTTTTTCGTGACTTAGATCCTCTATCATCAGCTTTACGGTGCAGTAGAGATATTTCTCTCTACTACGTTGCACCGTAAAACTAGTTGTAGAGGATCCATTTTGGTGTGATGTGTGTATGATGCTCATAGTTTTGCAACCAAAAATGATCAAGAAAATACCTAAAAATGGTTTCATTGGTCGCATTTGTTCGCGAATTTCCATAATGTTAAGGCATGCAATGCAATGCAAGTGCTTTAAAATTATATTTTGTCACAATTCTTGTGTGAACATATTTATTTATACATGTCCAATAAAAAGCATCAAACATAAAAATCAAAATGTTAATTGAAAAGTTTAATAAAGTCCTTGTTGAAGTTATTTGCATTGTGTTTTTTCTGAGATGTGTGACTTATAATTGTTTCCATGATTAAGTGCTAGACTGATATAGTTGATAGAATTTTATTGGAGTTTAAATATATGTTTAATTTCATATTGTAGATGGTTAATAAATATAGCAAGATGTCACAACTTATTAATCATTCACAAAATAAAATCAACCACAATTTTTAATATATTATCCACAATTTTCAGGTGTATATATGAACACAAATTATGTTGAATACATATCATGTATATTTAAAAACCTTAAAATTATGTATTTGAACACTTGAAAATCGCGTTTTATGTCATTCAAAGTCATGATTAATTACGTCAAATGGATGATAAGTGGATTGTGATACCTTGTTAGATTCATTAACCATTCACTGCACATAATTTACCATATATTTAAACAACGTTAAACCTCCAAATTATCGTTGGTTTTTAATGTCAAAATATCATTTCTCATAAAAGCAAATATTTTTGTTGAACTTAAAACTAGTCTTTGGTGCCCACCTGACCCTTTGGCCTTTACCTACTTTCATAACTCTTTTCTTTGTGGGTATAAGCACACTTGTCACCATATATTTGATCTGAAAAAACATGAAGTTTGATTATTAAGATTGTGACAAAAGCAATTTTCATAATTATTTTTCAGTTATGATCACAGTCACATACTATAGAAACACAGTAAATAACCTTGAACCTAAGGAATTTAATGTACTATATCAAAGAGTTCAGTTAATTTGGACCGTAAAAGAACGTGGAAAACTGCATGGTGTGCATGCAAAGCTTCAACTTTTCCTAGTAGTATAGTTTTATTTCTTCTTTTTCTCTCTCTTCTCTTATGCATATTACTTTATATTTTTTTATTATAAGGTATTCTATAAACTTATAACTGACATATTCTTTACTTGTGTTCCTCTATATGACAAAGTTTTTTTTTTTTTTTTGAGAACCTCTATATGACAAAGTTATATACTGCATCTTATGATTTCTTTTGTTAATGTAATGAGACAAAAGTCTTATATCTACCTACTTATGATCCATATCACTTTTTTAATTAATTAATTTTTTTGAGTGACATTGGTCTTTGTCAATTTTTGTCATTGTTATGTTTCATGATCTAGAACTATTAGATTCTTCTCATAATCCATGAAGGTTTGTACACCTCATAAAGCAGCAATTCTCCTGTCCTATCTATCACTTTCATTTTGTGTCGGTCACTTTTTACTTTATTCTTTGAACACAAAAATAGACCAATAGATACTATATAAACTCCATAATAAAATGAAAAAAGGGATATAGAGAAACAGTTCAACAATACCAATCAAATGCTTTAAATGATTAGGCCAGGGTATCCATGAGGTCCTAGATACTTATATGGCATAAGATTTTAATAATGAAATATACATAGTAAGAGTCACACATTGATATAAATCATGTTTGGATAAAAAAAAAATCTTAATCAAGTGCTTATAGCATAGACATTTATCATATAAGTGTTTATGTATTAAGTAATTTTTATAACAATATATAAAATAAAGTCAAATTATTTTAATAAGTTATAAGTTGTTTTCGTAAGTTATCCTAAAAACTTATGGAAATTAGCTGAAAACAATTTATGGACATGTCACAAGTAGATTTCATAAGCTACTCCAAACACTCTCACGAGTCTTTGTGTAATGAATATATGTTTCATAAGTTACTCCAAACACTCTCACAAGTGTTTGTGTAATAGATAAAATCAATAAGCTAATCCAAACATGCCCATAGTCTCAAAAGTGTCTATAAGCGGCATACAACTAGATATCCCTCATTTTAGAAGTCAGTTTTACAATGTTGAGTTAGGTTTACTCCAAATTCTAAGATAATATAATACATACAATACAAATATATTGAACCTCTCAATAACCTAAAAGTATCTTAAAATTTCCACTTGATTACAATACATTTAGCACCTTTGAATCTTTATGCCACAAACTTATCAGAGATTGTCCTATATGATTTTAACACATTTAATATGATTTTAGGCCTCAATTGTTGAGTACATTATAATATGATTTTAATTTGAATTTATTTAAAAATCCTATACACTATGATTCTATCTTACTTTAGCACTACTTAGGCTCAGTTTGAATAAATAGTTGAATTTAACATTTATACCATTAACACTTATCATATAACTGATTACATGCAAACTATTTTTATGATAAAAGATAAAATAAAAGTCAAATTGTTTTGATATATAAGCTATAAGCTGTTTTTGTAAATTATCTTTAAAAGCTTATGAAAATAGCTTATAGACATGTCATGAACTGTTTGCATAAACTCTTTCAAACCGTCATGTCCCACAAGTGTTTGTCATTGAATAAACTCAAATAAGTCAATCCAAACAGACCCTTAACGAGCTTGATTGCATTGCAGGATACGTATGCATTGTGTCGTGTGTTCAAGAAAAATGGAATCTGTTCTGATATGGAAGAGCAACAAGGACAATGTAGCATGTTACAAATTGAATGTTCCCAAACCATAACCAATAATGAATGTGAAATGATGTCTCCAGAAGTACTAGGAGCATCATCTTCATGTTTAGAAGAAGAAGACAAAGATGATTCATGGATGCAATTCATTACAGAAGATGCATGGTATTCTTCTAATACACCAATGGTTGGTGGTGAAGAAATTTCACATGTTACATTTACAAATTAA
Protein sequence

>MS.gene40438.t1

MSPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRKVSCQNRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECEDNTGLQDTYALCRVFKKNGICSDMEEQQGQCSMLQIECSQTITNNECEMMSPEVLGASSSCLEEEDKDDSWMQFITEDAWYSSNTPMVGGEEISHVTFTN