Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40522.t1 | XP_024639745.1 | 85.3 | 653 | 42 | 4 | 2 | 602 | 5 | 655 | 1.70E-305 | 1058.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40522.t1 | Q6JDV7 | 55.6 | 649 | 223 | 9 | 8 | 601 | 16 | 654 | 1.0e-178 | 628.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40522.t1 | A0A396HL96 | 85.3 | 653 | 42 | 4 | 2 | 602 | 5 | 655 | 1.2e-305 | 1058.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050114 | MS.gene40522 | 0.80447 | 2.13E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene40522 | MS.gene059371 | PPI |
| MS.gene40522 | MS.gene26468 | PPI |
| MS.gene059370 | MS.gene40522 | PPI |
| MS.gene40522 | MS.gene047859 | PPI |
| MS.gene40522 | MS.gene26467 | PPI |
| MS.gene059369 | MS.gene40522 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40522.t1 | MTR_5g005030 | 88.264 | 622 | 23 | 2 | 2 | 573 | 5 | 626 | 0.0 | 1115 |
| MS.gene40522.t1 | MTR_5g004960 | 32.770 | 296 | 181 | 8 | 47 | 332 | 370 | 657 | 4.82e-33 | 137 |
| MS.gene40522.t1 | MTR_5g004960 | 32.770 | 296 | 181 | 8 | 47 | 332 | 370 | 657 | 5.26e-33 | 136 |
| MS.gene40522.t1 | MTR_5g004960 | 32.770 | 296 | 181 | 8 | 47 | 332 | 370 | 657 | 5.88e-33 | 136 |
| MS.gene40522.t1 | MTR_4g094755 | 27.147 | 361 | 183 | 10 | 46 | 332 | 12 | 366 | 2.96e-25 | 111 |
| MS.gene40522.t1 | MTR_4g094755 | 27.374 | 358 | 180 | 10 | 46 | 329 | 12 | 363 | 6.07e-25 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40522.t1 | AT1G49980 | 58.265 | 611 | 186 | 10 | 8 | 561 | 16 | 614 | 0.0 | 656 |
| MS.gene40522.t1 | AT1G49980 | 58.265 | 611 | 186 | 10 | 8 | 561 | 16 | 614 | 0.0 | 656 |
| MS.gene40522.t1 | AT1G49980 | 58.292 | 609 | 189 | 9 | 8 | 561 | 16 | 614 | 0.0 | 656 |
| MS.gene40522.t1 | AT1G49980 | 58.292 | 609 | 189 | 9 | 8 | 561 | 16 | 614 | 0.0 | 656 |
| MS.gene40522.t1 | AT1G49980 | 58.265 | 611 | 186 | 10 | 8 | 561 | 16 | 614 | 0.0 | 656 |
| MS.gene40522.t1 | AT1G49980 | 58.265 | 611 | 186 | 10 | 8 | 561 | 16 | 614 | 0.0 | 656 |
| MS.gene40522.t1 | AT1G49980 | 58.265 | 611 | 186 | 10 | 8 | 561 | 16 | 614 | 0.0 | 656 |
| MS.gene40522.t1 | AT1G49980 | 58.686 | 472 | 177 | 8 | 97 | 561 | 1 | 461 | 2.01e-176 | 513 |
| MS.gene40522.t1 | AT1G49980 | 59.236 | 471 | 176 | 8 | 97 | 561 | 1 | 461 | 2.03e-176 | 513 |
| MS.gene40522.t1 | AT5G44750 | 28.608 | 388 | 232 | 13 | 49 | 406 | 376 | 748 | 4.56e-32 | 134 |
| MS.gene40522.t1 | AT5G44750 | 29.188 | 394 | 226 | 15 | 49 | 406 | 376 | 752 | 1.97e-31 | 132 |
| MS.gene40522.t1 | AT5G44740 | 27.855 | 359 | 179 | 10 | 45 | 329 | 11 | 363 | 3.42e-26 | 114 |
| MS.gene40522.t1 | AT5G44740 | 29.016 | 193 | 120 | 4 | 152 | 329 | 89 | 279 | 4.70e-14 | 75.9 |
| MS.gene40522.t1 | AT5G44740 | 29.016 | 193 | 120 | 4 | 152 | 329 | 106 | 296 | 7.28e-14 | 75.5 |
Find 127 sgRNAs with CRISPR-Local
Find 422 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTATACAGGCCAGGAAATT+TGG | 0.195002 | 5.2:-448243 | MS.gene40522:intron |
| TTTAAGTAACCCTATGTTAA+AGG | 0.210169 | 5.2:-448390 | MS.gene40522:CDS |
| TACTCTGTGGGTTTAGGTTT+GGG | 0.229231 | 5.2:-446474 | MS.gene40522:CDS |
| CACATTCAGCAGAGGTTATC+TGG | 0.234143 | 5.2:-442722 | MS.gene40522:CDS |
| CTCGCGACCTTTCAAGGATT+TGG | 0.266763 | 5.2:-448454 | MS.gene40522:CDS |
| GCTTCAGTCCCTGCTGATTT+AGG | 0.275310 | 5.2:-442700 | MS.gene40522:CDS |
| CAGTGGATGTACAGAGGTTC+TGG | 0.277512 | 5.2:-445008 | MS.gene40522:CDS |
| GGAGTTCGTTCTGCCATGCC+TGG | 0.295650 | 5.2:-448222 | MS.gene40522:CDS |
| TTACTCTGTGGGTTTAGGTT+TGG | 0.301255 | 5.2:-446475 | MS.gene40522:CDS |
| GCAAAATGATTTGATAGTTT+AGG | 0.305032 | 5.2:+442568 | None:intergenic |
| CCTGTTTCAGTACGATTAAT+AGG | 0.312775 | 5.2:-445661 | MS.gene40522:intron |
| TTTGAAGCAACTCGGCAAAA+TGG | 0.312958 | 5.2:+444798 | None:intergenic |
| AAGAAGGTTCCAGTGGATTC+AGG | 0.316867 | 5.2:-443189 | MS.gene40522:CDS |
| ATTACAAATTTCATTACTTC+AGG | 0.328953 | 5.2:-445414 | MS.gene40522:CDS |
| GACGAAGGAAACCTCATAAT+TGG | 0.339849 | 5.2:+448325 | None:intergenic |
| ATCATTTCCTGACAAGAATT+AGG | 0.357770 | 5.2:+444911 | None:intergenic |
| CCTATTAATCGTACTGAAAC+AGG | 0.360995 | 5.2:+445661 | None:intergenic |
| CGAGGAAAAGACCTGCATTC+AGG | 0.364495 | 5.2:-443215 | MS.gene40522:CDS |
| GGTAAAACATACTGTCCATT+TGG | 0.365773 | 5.2:+447078 | None:intergenic |
| ATTCTCCCCAAGCAAGATTT+CGG | 0.366592 | 5.2:-446443 | MS.gene40522:CDS |
| AAGCTTCTCGCGACCTTTCA+AGG | 0.369769 | 5.2:-448460 | MS.gene40522:CDS |
| CACTAAACTGTGATACTCTA+AGG | 0.372191 | 5.2:+445478 | None:intergenic |
| TGACAGTTGTTTCATTCAAC+AGG | 0.373638 | 5.2:+442743 | None:intergenic |
| GTATACTTGTTGAAATCAAC+TGG | 0.388510 | 5.2:+448159 | None:intergenic |
| TTAAGTAACCCTATGTTAAA+GGG | 0.398161 | 5.2:-448389 | MS.gene40522:CDS |
| CTAATCTCCTGGAGGATGAT+AGG | 0.398223 | 5.2:-444934 | MS.gene40522:CDS |
| ATTGGCCTGCCCTTTAACAT+AGG | 0.399508 | 5.2:+448380 | None:intergenic |
| TACAGTGATTTGACCAGAAA+AGG | 0.401634 | 5.2:-448132 | MS.gene40522:intron |
| AGAACGAACTCCAAATTTCC+TGG | 0.407264 | 5.2:+448233 | None:intergenic |
| GATATCCACTGCCAATTATG+AGG | 0.408271 | 5.2:-448336 | MS.gene40522:intron |
| GATTTGGTTACATGTAGATA+TGG | 0.415193 | 5.2:-448438 | MS.gene40522:CDS |
| GAATTTCATCACTGGTAGTC+TGG | 0.415688 | 5.2:-448008 | MS.gene40522:CDS |
| GAAACTGATCTTTCCCTTGA+CGG | 0.420296 | 5.2:-445327 | MS.gene40522:CDS |
| ACCTTCTTCTTCCTGAATGC+AGG | 0.431352 | 5.2:+443204 | None:intergenic |
| ATGTGAGCAGATGCTGGATA+AGG | 0.432320 | 5.2:-446798 | MS.gene40522:CDS |
| TTACTTCAGGAGAAGCCAAT+TGG | 0.434213 | 5.2:-445401 | MS.gene40522:CDS |
| TCCTGTCCGCCTAAATCAGC+AGG | 0.437301 | 5.2:+442691 | None:intergenic |
| ATAACAGCCAAGCGGTCATT+TGG | 0.439647 | 5.2:+447057 | None:intergenic |
| AATCTTTCCTCAACAAAACT+TGG | 0.440500 | 5.2:+444836 | None:intergenic |
| AGACTACCAGTGATGAAATT+CGG | 0.445652 | 5.2:+448010 | None:intergenic |
| GAGTTCGTTCTGCCATGCCT+GGG | 0.453647 | 5.2:-448221 | MS.gene40522:CDS |
| CTGGGATCAACTTCTTTCCA+AGG | 0.459075 | 5.2:-444989 | MS.gene40522:CDS |
| TATATATTGTACCTTTGAAT+CGG | 0.462105 | 5.2:+444743 | None:intergenic |
| AACAAATGATTACCATCAAA+AGG | 0.462445 | 5.2:+445273 | None:intergenic |
| TTTGAAATTAGCTTTCCCTT+TGG | 0.466327 | 5.2:-442668 | MS.gene40522:CDS |
| CCCTGCTGATTTAGGCGGAC+AGG | 0.473035 | 5.2:-442692 | MS.gene40522:CDS |
| TCTTTCCAAGGGCAGTTTGA+GGG | 0.475133 | 5.2:-444977 | MS.gene40522:CDS |
| ATAGTCTTCTGTGTAGGATC+AGG | 0.476314 | 5.2:+445435 | None:intergenic |
| TGATAGGCCTAATTCTTGTC+AGG | 0.480794 | 5.2:-444918 | MS.gene40522:CDS |
| ACCGAATCGCTTACTTGCTA+AGG | 0.488096 | 5.2:-447776 | MS.gene40522:intron |
| ATGCAACAGCGCTTCATCCT+CGG | 0.489046 | 5.2:+446386 | None:intergenic |
| TGATAAAAGAATTCTTGAAC+TGG | 0.493707 | 5.2:-448483 | MS.gene40522:CDS |
| CTTTCCTCAACAAAACTTGG+AGG | 0.498930 | 5.2:+444839 | None:intergenic |
| TGTGAGCAGATGCTGGATAA+GGG | 0.498978 | 5.2:-446797 | MS.gene40522:CDS |
| TTGGCCTGCCCTTTAACATA+GGG | 0.499608 | 5.2:+448381 | None:intergenic |
| GAATAACGGGTCTAATCTCC+TGG | 0.502177 | 5.2:-444945 | MS.gene40522:CDS |
| CTCAAACAGACCTTTCTGAT+AGG | 0.502889 | 5.2:+447015 | None:intergenic |
| AAGCACATGTGAGCAGATGC+TGG | 0.504634 | 5.2:-446804 | MS.gene40522:CDS |
| CACTAGCGCGAAAGCAGGAA+TGG | 0.504927 | 5.2:-448783 | MS.gene40522:CDS |
| ATTACCAAAGCTCCACTCTT+CGG | 0.505152 | 5.2:-445242 | MS.gene40522:CDS |
| AACAGACCTTTCTGATAGGA+AGG | 0.506790 | 5.2:+447019 | None:intergenic |
| TTCTTTCCAAGGGCAGTTTG+AGG | 0.508910 | 5.2:-444978 | MS.gene40522:CDS |
| ATCTGTGTGCCTACCGTCAA+GGG | 0.510405 | 5.2:+445314 | None:intergenic |
| TTTGTAATAGTCTTCTGTGT+AGG | 0.512750 | 5.2:+445429 | None:intergenic |
| TGCAAACTTCAGTTATATCA+AGG | 0.514648 | 5.2:+447975 | None:intergenic |
| ACCTTAGCAAGTAAGCGATT+CGG | 0.530222 | 5.2:+447775 | None:intergenic |
| ACTGGTCTCACATGTAGTGC+TGG | 0.531695 | 5.2:-447805 | MS.gene40522:CDS |
| CCATGCCTGGGTTTATTGCA+CGG | 0.534158 | 5.2:-448209 | MS.gene40522:CDS |
| AGCGCAGAGTGGTCTGCAGT+TGG | 0.535364 | 5.2:-442613 | MS.gene40522:CDS |
| ACTGGAACAAAGATTAACTC+TGG | 0.536947 | 5.2:+448177 | None:intergenic |
| CATGTAACCAAATCCTTGAA+AGG | 0.537054 | 5.2:+448447 | None:intergenic |
| ATTCTAATTTCAAAGCCAAA+GGG | 0.538073 | 5.2:+442653 | None:intergenic |
| AATTCTAATTTCAAAGCCAA+AGG | 0.538917 | 5.2:+442652 | None:intergenic |
| GATCTCTAGCATGCTGATGA+TGG | 0.541217 | 5.2:+442765 | None:intergenic |
| GGAAATGATAATGTTGTGGT+TGG | 0.541962 | 5.2:-444897 | MS.gene40522:CDS |
| AGTGGATGTACAGAGGTTCT+GGG | 0.544383 | 5.2:-445007 | MS.gene40522:CDS |
| TTTGAATCGGAACAGATGCT+TGG | 0.545838 | 5.2:+444756 | None:intergenic |
| AATTAGGCCTATCATCCTCC+AGG | 0.548855 | 5.2:+444927 | None:intergenic |
| GACATGGTGCCAACAGCCAT+TGG | 0.549036 | 5.2:+448362 | None:intergenic |
| AAGCATCTGTTCCGATTCAA+AGG | 0.554546 | 5.2:-444754 | MS.gene40522:intron |
| GACCACTCTGCGCTAAATGA+AGG | 0.554793 | 5.2:+442622 | None:intergenic |
| TCCACTCTTCGGAAAACTGA+TGG | 0.556851 | 5.2:-445231 | MS.gene40522:CDS |
| TATGTTAAAGGGCAGGCCAA+TGG | 0.557242 | 5.2:-448378 | MS.gene40522:CDS |
| GTAACCCTATGTTAAAGGGC+AGG | 0.561428 | 5.2:-448385 | MS.gene40522:CDS |
| GGGTTTAGGTTTGGGAAAGA+CGG | 0.563053 | 5.2:-446466 | MS.gene40522:CDS |
| GTTTACACTAGCGCGAAAGC+AGG | 0.568256 | 5.2:-448788 | MS.gene40522:CDS |
| GGAAACCTCATAATTGGCAG+TGG | 0.570621 | 5.2:+448331 | None:intergenic |
| GAAAACTGATGGTGCAGAGA+AGG | 0.570685 | 5.2:-445220 | MS.gene40522:intron |
| CTTAGAGTATCACAGTTTAG+TGG | 0.571256 | 5.2:-445477 | MS.gene40522:CDS |
| ATCCTCCCTTCCTATCAGAA+AGG | 0.575436 | 5.2:-447025 | MS.gene40522:intron |
| CTGATCTTTCCCTTGACGGT+AGG | 0.579399 | 5.2:-445323 | MS.gene40522:CDS |
| TTAACGTCTCCTGAATCCAC+TGG | 0.581023 | 5.2:+443180 | None:intergenic |
| TGGGATCAACTTCTTTCCAA+GGG | 0.581757 | 5.2:-444988 | MS.gene40522:CDS |
| ACCTGCATTCAGGAAGAAGA+AGG | 0.582202 | 5.2:-443205 | MS.gene40522:CDS |
| GTCGGCATTTATGAAGAGAC+TGG | 0.582863 | 5.2:-447823 | MS.gene40522:CDS |
| AGCGCGAAAGCAGGAATGGA+AGG | 0.585360 | 5.2:-448779 | MS.gene40522:CDS |
| TCAGACATAAACAAGCCAAA+TGG | 0.586732 | 5.2:-447093 | MS.gene40522:CDS |
| TATGATCCGAATTTCATCAC+TGG | 0.587126 | 5.2:-448016 | MS.gene40522:CDS |
| TCTCACATGTAGTGCTGGAG+TGG | 0.588105 | 5.2:-447800 | MS.gene40522:CDS |
| GATCTGTGTGCCTACCGTCA+AGG | 0.594862 | 5.2:+445313 | None:intergenic |
| AAGGGCAGGCCAATGGCTGT+TGG | 0.602052 | 5.2:-448371 | MS.gene40522:CDS |
| TCAGTCCCTGCTGATTTAGG+CGG | 0.603040 | 5.2:-442697 | MS.gene40522:CDS |
| TGCCTTCATTTAGCGCAGAG+TGG | 0.612055 | 5.2:-442624 | MS.gene40522:CDS |
| GTCAGGAAATGATAATGTTG+TGG | 0.616151 | 5.2:-444901 | MS.gene40522:CDS |
| GACTATAAATGTTCACTCTG+TGG | 0.619008 | 5.2:-444872 | MS.gene40522:CDS |
| GACCTTTCTGATAGGAAGGG+AGG | 0.620126 | 5.2:+447023 | None:intergenic |
| CCGTGCAATAAACCCAGGCA+TGG | 0.621698 | 5.2:+448209 | None:intergenic |
| AGCTTCCGTGCAATAAACCC+AGG | 0.632231 | 5.2:+448204 | None:intergenic |
| CAGGAAGAAGAAGGTTCCAG+TGG | 0.642614 | 5.2:-443196 | MS.gene40522:CDS |
| ACAGACCTTTCTGATAGGAA+GGG | 0.643641 | 5.2:+447020 | None:intergenic |
| TGGGAAGCGATGATAATCGA+TGG | 0.648696 | 5.2:-448826 | MS.gene40522:CDS |
| GGCAGTGGATATCATAGACA+TGG | 0.648981 | 5.2:+448346 | None:intergenic |
| CTGTATCAGCGACAAAGTCG+TGG | 0.657275 | 5.2:+445349 | None:intergenic |
| ATTGCTCAAGAAATCAGAGT+CGG | 0.667415 | 5.2:-447841 | MS.gene40522:CDS |
| CAGTTTAGTGGACAAAAGTG+TGG | 0.667576 | 5.2:-445465 | MS.gene40522:CDS |
| CCTGTCCGCCTAAATCAGCA+GGG | 0.682258 | 5.2:+442692 | None:intergenic |
| GGAAAAGTATCAGCAATGAG+AGG | 0.686628 | 5.2:-446422 | MS.gene40522:CDS |
| TATACATCTCACAGACAAGG+TGG | 0.687957 | 5.2:-443273 | MS.gene40522:intron |
| CAACAGCGCTTCATCCTCGG+TGG | 0.690052 | 5.2:+446389 | None:intergenic |
| TAACCACAGTGGATGTACAG+AGG | 0.705399 | 5.2:-445014 | MS.gene40522:CDS |
| ACAACTGTCACATTCAGCAG+AGG | 0.705530 | 5.2:-442730 | MS.gene40522:CDS |
| TAACGGGTCTAATCTCCTGG+AGG | 0.717537 | 5.2:-444942 | MS.gene40522:CDS |
| TGAAAGTCATAACAGCCAAG+CGG | 0.719674 | 5.2:+447049 | None:intergenic |
| ACAATCAACCTCCTACCTCG+AGG | 0.722277 | 5.2:-443233 | MS.gene40522:CDS |
| TGATAGTGTTGACAGATTGG+GGG | 0.759194 | 5.2:-446872 | MS.gene40522:intron |
| GAACCTCTGTACATCCACTG+TGG | 0.781808 | 5.2:+445011 | None:intergenic |
| GATGCAAGTTCTAACCACAG+TGG | 0.797600 | 5.2:-445025 | MS.gene40522:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAATAACTTCTTAATTT+AGG | - | chr5.2:442838-442857 | MS.gene40522:intron | 10.0% |
| !! | ATAATTTCTATTTGTAATTA+TGG | - | chr5.2:447106-447125 | MS.gene40522:intron | 10.0% |
| !! | ATTAATAACTTCTTAATTTA+GGG | - | chr5.2:442839-442858 | MS.gene40522:intron | 10.0% |
| !! | ATTATGATAAGATAAATTAT+TGG | - | chr5.2:445463-445482 | MS.gene40522:CDS | 10.0% |
| !! | CAAAAATCAATAAATTAATA+AGG | + | chr5.2:447515-447534 | None:intergenic | 10.0% |
| !! | CAGTTAATTTATAAAATTAT+TGG | - | chr5.2:444421-444440 | MS.gene40522:intron | 10.0% |
| !!! | CAATAATTTTATAAATTAAC+TGG | + | chr5.2:444423-444442 | None:intergenic | 10.0% |
| !! | AAAATTATATAAAAGGTAAC+TGG | + | chr5.2:443930-443949 | None:intergenic | 15.0% |
| !! | GGCTAAAAAAATTATATAAA+AGG | + | chr5.2:443937-443956 | None:intergenic | 15.0% |
| !!! | AATTTATTGATTTTTGTGAT+GGG | - | chr5.2:447519-447538 | MS.gene40522:intron | 15.0% |
| !!! | TAATTTATTGATTTTTGTGA+TGG | - | chr5.2:447518-447537 | MS.gene40522:intron | 15.0% |
| !!! | TCATTTTCTAAAAGAAATAT+CGG | - | chr5.2:447750-447769 | MS.gene40522:intron | 15.0% |
| !!! | TTTTTAAATGAAATACATTG+AGG | - | chr5.2:443770-443789 | MS.gene40522:intron | 15.0% |
| !! | ACAATTGCAAAAAAAATAGT+GGG | - | chr5.2:446696-446715 | MS.gene40522:intron | 20.0% |
| !! | AGATTATTAGCCAATAATAA+CGG | + | chr5.2:446946-446965 | None:intergenic | 20.0% |
| !! | ATTACAAATTTCATTACTTC+AGG | - | chr5.2:445977-445996 | MS.gene40522:intron | 20.0% |
| !! | ATTTACTAGATAACACTAAA+AGG | - | chr5.2:444020-444039 | MS.gene40522:intron | 20.0% |
| !! | CAAACAAATAGAATAAGTTT+AGG | + | chr5.2:447437-447456 | None:intergenic | 20.0% |
| !! | CATGATAAAATGAAAAAAAC+TGG | + | chr5.2:443853-443872 | None:intergenic | 20.0% |
| !! | CCAAAAATAAAACAAGTTAA+CGG | + | chr5.2:445765-445784 | None:intergenic | 20.0% |
| !! | CTAACAAAAAAATGATCAAT+GGG | + | chr5.2:446874-446893 | None:intergenic | 20.0% |
| !! | TACAATTGCAAAAAAAATAG+TGG | - | chr5.2:446695-446714 | MS.gene40522:intron | 20.0% |
| !! | TATATATTGTACCTTTGAAT+CGG | + | chr5.2:446651-446670 | None:intergenic | 20.0% |
| !! | TCATTTATCACATTATCAAA+AGG | - | chr5.2:442776-442795 | MS.gene40522:intron | 20.0% |
| !! | TTTAATATAATCACATGTGT+CGG | + | chr5.2:447725-447744 | None:intergenic | 20.0% |
| !! | TTTACTAGATAACACTAAAA+GGG | - | chr5.2:444021-444040 | MS.gene40522:intron | 20.0% |
| !!! | AAAAATGATGGAAAACAAAA+AGG | - | chr5.2:447865-447884 | MS.gene40522:intron | 20.0% |
| !!! | AAAAGAACTATTTTTCCAAT+TGG | + | chr5.2:446008-446027 | None:intergenic | 20.0% |
| !!! | AAAATCCTTCTTTTAACATA+TGG | - | chr5.2:444865-444884 | MS.gene40522:CDS | 20.0% |
| !!! | AAAATGATGGAAAACAAAAA+GGG | - | chr5.2:447866-447885 | MS.gene40522:intron | 20.0% |
| !!! | AGCTTTGTGTTAAAATATAT+AGG | - | chr5.2:444057-444076 | MS.gene40522:intron | 20.0% |
| !!! | ATTGAAAATTTGAAATCTAC+CGG | + | chr5.2:445081-445100 | None:intergenic | 20.0% |
| !!! | ATTTATTGATTTTTGTGATG+GGG | - | chr5.2:447520-447539 | MS.gene40522:intron | 20.0% |
| !!! | ATTTTTAAAGGGAAAAAAAG+AGG | + | chr5.2:443519-443538 | None:intergenic | 20.0% |
| !!! | CAAAAAAAAAATACCTTTTC+TGG | + | chr5.2:443275-443294 | None:intergenic | 20.0% |
| !!! | CATTGATCATTTTTTTGTTA+GGG | - | chr5.2:446873-446892 | MS.gene40522:intron | 20.0% |
| !!! | CTACATATTCCATTTTTAAA+GGG | + | chr5.2:443530-443549 | None:intergenic | 20.0% |
| !!! | GAACATTTTTTTTATCTTTC+TGG | - | chr5.2:444735-444754 | MS.gene40522:intron | 20.0% |
| !!! | TCTACATATTCCATTTTTAA+AGG | + | chr5.2:443531-443550 | None:intergenic | 20.0% |
| !!! | TCTTTTTTTCCCTTTAAAAA+TGG | - | chr5.2:443518-443537 | MS.gene40522:intron | 20.0% |
| !!! | TTTATTTTTGGCAATTAAGA+TGG | - | chr5.2:445774-445793 | MS.gene40522:intron | 20.0% |
| !!! | TTTTTTCAGCATCATTTAAA+TGG | - | chr5.2:444682-444701 | MS.gene40522:intron | 20.0% |
| ! | AAAATAGAGAAACTCATTGA+GGG | - | chr5.2:447157-447176 | MS.gene40522:intron | 25.0% |
| ! | AAATACACAATCTATAGGTT+CGG | - | chr5.2:445623-445642 | MS.gene40522:intron | 25.0% |
| ! | AAATGCCATATGTTAAAAGA+AGG | + | chr5.2:444873-444892 | None:intergenic | 25.0% |
| ! | AACAAATGATTACCATCAAA+AGG | + | chr5.2:446121-446140 | None:intergenic | 25.0% |
| ! | AAGAGGTTTAATACATTTGA+AGG | + | chr5.2:443502-443521 | None:intergenic | 25.0% |
| ! | AATAAAAAGAAAACACCAAG+TGG | + | chr5.2:443751-443770 | None:intergenic | 25.0% |
| ! | AATGTGTAAGTTATCCAAAT+TGG | + | chr5.2:443998-444017 | None:intergenic | 25.0% |
| ! | AATTAGTAATGCGTAAACAT+TGG | + | chr5.2:446299-446318 | None:intergenic | 25.0% |
| ! | AATTCTAATTTCAAAGCCAA+AGG | + | chr5.2:448742-448761 | None:intergenic | 25.0% |
| ! | AGTTCGAAATTGTGAATAAA+AGG | + | chr5.2:447268-447287 | None:intergenic | 25.0% |
| ! | ATCGCTACTTAGAAAAATAA+GGG | + | chr5.2:446215-446234 | None:intergenic | 25.0% |
| ! | ATGTGTAAGTTATCCAAATT+GGG | + | chr5.2:443997-444016 | None:intergenic | 25.0% |
| ! | ATTAACTGGTAAGATGAAAT+TGG | + | chr5.2:444409-444428 | None:intergenic | 25.0% |
| ! | ATTATATAACTCAAAAGCTG+AGG | - | chr5.2:447959-447978 | MS.gene40522:CDS | 25.0% |
| ! | ATTCTAATTTCAAAGCCAAA+GGG | + | chr5.2:448741-448760 | None:intergenic | 25.0% |
| ! | ATTGTTTATGAAATGAGCAA+AGG | - | chr5.2:442660-442679 | MS.gene40522:CDS | 25.0% |
| ! | CAACAACAAGAAGTAAATAA+AGG | - | chr5.2:447318-447337 | MS.gene40522:intron | 25.0% |
| ! | CAGTTATTGTTTATCTTTCA+GGG | - | chr5.2:445051-445070 | MS.gene40522:intron | 25.0% |
| ! | CCTAACAAAAAAATGATCAA+TGG | + | chr5.2:446875-446894 | None:intergenic | 25.0% |
| ! | CGATTGAAGCTTATAATATA+TGG | + | chr5.2:443091-443110 | None:intergenic | 25.0% |
| ! | CTAAGAAATACACAATCTAT+AGG | - | chr5.2:445618-445637 | MS.gene40522:intron | 25.0% |
| ! | CTGTAAGATTAAAATTGCAA+TGG | - | chr5.2:443473-443492 | MS.gene40522:intron | 25.0% |
| ! | TAAAATAGAGAAACTCATTG+AGG | - | chr5.2:447156-447175 | MS.gene40522:intron | 25.0% |
| ! | TAAATGAAATACATTGAGGA+AGG | - | chr5.2:443774-443793 | MS.gene40522:intron | 25.0% |
| ! | TATCGCTACTTAGAAAAATA+AGG | + | chr5.2:446216-446235 | None:intergenic | 25.0% |
| ! | TCAGTTATTGTTTATCTTTC+AGG | - | chr5.2:445050-445069 | MS.gene40522:intron | 25.0% |
| ! | TGAGTTATACATGTAAACAT+GGG | + | chr5.2:448553-448572 | None:intergenic | 25.0% |
| ! | TGATAAAAGAATTCTTGAAC+TGG | - | chr5.2:442908-442927 | MS.gene40522:intron | 25.0% |
| ! | TGGAAAACAGAAAATCATAA+AGG | + | chr5.2:443833-443852 | None:intergenic | 25.0% |
| ! | TTAAGTAACCCTATGTTAAA+GGG | - | chr5.2:443002-443021 | MS.gene40522:intron | 25.0% |
| ! | TTACTAGATAACACTAAAAG+GGG | - | chr5.2:444022-444041 | MS.gene40522:intron | 25.0% |
| ! | TTTAAGTAACCCTATGTTAA+AGG | - | chr5.2:443001-443020 | MS.gene40522:intron | 25.0% |
| ! | TTTATTCAAACAGACTCAAA+GGG | - | chr5.2:447228-447247 | MS.gene40522:intron | 25.0% |
| ! | TTTGTATAAAGACGTTGTTA+AGG | - | chr5.2:448506-448525 | MS.gene40522:intron | 25.0% |
| !! | AATATTTTCAGAATGAGGAA+CGG | - | chr5.2:442688-442707 | MS.gene40522:CDS | 25.0% |
| !! | AGATATACAGGTAAAAGTTT+TGG | + | chr5.2:443958-443977 | None:intergenic | 25.0% |
| !! | ATAAGATAAATTATTGGCCT+GGG | - | chr5.2:445469-445488 | MS.gene40522:CDS | 25.0% |
| !! | ATCCAAATATTTTCAGAATG+AGG | - | chr5.2:442683-442702 | MS.gene40522:CDS | 25.0% |
| !! | ATTTGCTTTGTCTATTGATT+CGG | + | chr5.2:446810-446829 | None:intergenic | 25.0% |
| !! | CTTTTTCCTTTAATTACTGA+TGG | - | chr5.2:443315-443334 | MS.gene40522:intron | 25.0% |
| !! | GCAAAATGATTTGATAGTTT+AGG | + | chr5.2:448826-448845 | None:intergenic | 25.0% |
| !! | GTAAGTTTAGCTTCATATAA+AGG | - | chr5.2:444785-444804 | MS.gene40522:CDS | 25.0% |
| !! | TATGTTTATGTCTTTGAAAG+AGG | - | chr5.2:444474-444493 | MS.gene40522:intron | 25.0% |
| !! | TGATAATGTGATAAATGAGA+GGG | + | chr5.2:442774-442793 | None:intergenic | 25.0% |
| !! | TTCCTCATTCTGAAAATATT+TGG | + | chr5.2:442688-442707 | None:intergenic | 25.0% |
| !! | TTGACAAAGAAAAAGTACAA+AGG | - | chr5.2:442637-442656 | MS.gene40522:CDS | 25.0% |
| !! | TTTTATTCAAACAGACTCAA+AGG | - | chr5.2:447227-447246 | MS.gene40522:intron | 25.0% |
| !!! | CCATTGATCATTTTTTTGTT+AGG | - | chr5.2:446872-446891 | MS.gene40522:intron | 25.0% |
| !!! | CCGTTAACTTGTTTTATTTT+TGG | - | chr5.2:445762-445781 | MS.gene40522:intron | 25.0% |
| !!! | TATTTTTTTCTTCTCCTCTT+AGG | - | chr5.2:445890-445909 | MS.gene40522:intron | 25.0% |
| !!! | TCAGCTTTTGAGTTATATAA+TGG | + | chr5.2:447960-447979 | None:intergenic | 25.0% |
| !!! | TTGATAATGTGATAAATGAG+AGG | + | chr5.2:442775-442794 | None:intergenic | 25.0% |
| AAGCTACCATCAGTAATTAA+AGG | + | chr5.2:443324-443343 | None:intergenic | 30.0% | |
| AATCTTTCCTCAACAAAACT+TGG | + | chr5.2:446558-446577 | None:intergenic | 30.0% | |
| AATGACATCATGTAATCACA+TGG | + | chr5.2:447617-447636 | None:intergenic | 30.0% | |
| ACGATTGATATCTTAATGAG+TGG | + | chr5.2:447404-447423 | None:intergenic | 30.0% | |
| AGCTTATAATATATGGACGA+AGG | + | chr5.2:443084-443103 | None:intergenic | 30.0% | |
| AGGGAAAAAATGTGAATAAC+GGG | - | chr5.2:446433-446452 | MS.gene40522:CDS | 30.0% | |
| ATCATTTCCTGACAAGAATT+AGG | + | chr5.2:446483-446502 | None:intergenic | 30.0% | |
| ATGACATCATGTAATCACAT+GGG | + | chr5.2:447616-447635 | None:intergenic | 30.0% | |
| ATTGTAAAAACCACGACAAA+TGG | + | chr5.2:446681-446700 | None:intergenic | 30.0% | |
| CATGTTTACATGTATAACTC+AGG | - | chr5.2:448552-448571 | MS.gene40522:intron | 30.0% | |
| CTAATAATGAACGATACTGT+TGG | - | chr5.2:447839-447858 | MS.gene40522:CDS | 30.0% | |
| CTGAGTTATACATGTAAACA+TGG | + | chr5.2:448554-448573 | None:intergenic | 30.0% | |
| GAGGGAAAAAATGTGAATAA+CGG | - | chr5.2:446432-446451 | MS.gene40522:CDS | 30.0% | |
| GAGTTATACATGTAAACATG+GGG | + | chr5.2:448552-448571 | None:intergenic | 30.0% | |
| GATAAGATAAATTATTGGCC+TGG | - | chr5.2:445468-445487 | MS.gene40522:CDS | 30.0% | |
| GGGAAATGAAATACTTAGTT+GGG | + | chr5.2:448532-448551 | None:intergenic | 30.0% | |
| TACTTAAACAGATAGCTAAC+CGG | + | chr5.2:444655-444674 | None:intergenic | 30.0% | |
| TAGCATTTGCAAGAGAAATA+TGG | + | chr5.2:445601-445620 | None:intergenic | 30.0% | |
| TCTTAATGAGTGGTTATGTT+AGG | + | chr5.2:447394-447413 | None:intergenic | 30.0% | |
| TGCAAACTTCAGTTATATCA+AGG | + | chr5.2:443419-443438 | None:intergenic | 30.0% | |
| TGTAGCATAAACTCAACATA+TGG | - | chr5.2:446920-446939 | MS.gene40522:intron | 30.0% | |
| TGTGTACAATTAAGACAATG+CGG | + | chr5.2:447073-447092 | None:intergenic | 30.0% | |
| TTATTCAAACAGACTCAAAG+GGG | - | chr5.2:447229-447248 | MS.gene40522:intron | 30.0% | |
| TTTGTAATAGTCTTCTGTGT+AGG | + | chr5.2:445965-445984 | None:intergenic | 30.0% | |
| ! | ATCTCCTTTTGTCTTTATAC+AGG | - | chr5.2:443135-443154 | MS.gene40522:intron | 30.0% |
| ! | ATGCCTTTAATAGAAAGTGT+TGG | + | chr5.2:447562-447581 | None:intergenic | 30.0% |
| ! | GAATAGTCTTGCTTTAATTC+AGG | + | chr5.2:447184-447203 | None:intergenic | 30.0% |
| ! | GAATTCTTTTATCAGCAATC+TGG | + | chr5.2:442902-442921 | None:intergenic | 30.0% |
| ! | GATTTGGTTACATGTAGATA+TGG | - | chr5.2:442953-442972 | MS.gene40522:intron | 30.0% |
| ! | GTATACTTGTTGAAATCAAC+TGG | + | chr5.2:443235-443254 | None:intergenic | 30.0% |
| ! | TGTTGTTGATTGAGATATAC+AGG | + | chr5.2:443970-443989 | None:intergenic | 30.0% |
| ! | TTTCTATTAAAGGCATGTCT+CGG | - | chr5.2:447566-447585 | MS.gene40522:intron | 30.0% |
| !! | ATTGATAGTGTTGACAGATT+GGG | - | chr5.2:444517-444536 | MS.gene40522:intron | 30.0% |
| !! | CGTATTTTGAAGGAAGTTTT+TGG | - | chr5.2:444561-444580 | MS.gene40522:intron | 30.0% |
| !! | GAAGAGATAAATTTGTTGGA+AGG | - | chr5.2:448436-448455 | MS.gene40522:CDS | 30.0% |
| !! | TTTGAAATTAGCTTTCCCTT+TGG | - | chr5.2:448723-448742 | MS.gene40522:intron | 30.0% |
| !!! | CATGTTTGTTAGTTTTTCAG+AGG | - | chr5.2:443352-443371 | MS.gene40522:intron | 30.0% |
| !!! | GCAGATTTTTTTTACTCTGT+GGG | - | chr5.2:444905-444924 | MS.gene40522:CDS | 30.0% |
| !!! | TGCAGATTTTTTTTACTCTG+TGG | - | chr5.2:444904-444923 | MS.gene40522:CDS | 30.0% |
| !!! | TTTTTTTACTCTGTGGGTTT+AGG | - | chr5.2:444911-444930 | MS.gene40522:CDS | 30.0% |
| AAAAGGTAACTGGCACAATT+AGG | + | chr5.2:443920-443939 | None:intergenic | 35.0% | |
| AAAGCAAGACTATTCGAACA+AGG | - | chr5.2:447189-447208 | MS.gene40522:intron | 35.0% | |
| AACAAATTTATCTCTTCCCC+TGG | + | chr5.2:448433-448452 | None:intergenic | 35.0% | |
| AACCACATACAATGCAAAAC+AGG | + | chr5.2:444100-444119 | None:intergenic | 35.0% | |
| AAGCAAGACTATTCGAACAA+GGG | - | chr5.2:447190-447209 | MS.gene40522:intron | 35.0% | |
| AATGAGTGGTTATGTTAGGT+AGG | + | chr5.2:447390-447409 | None:intergenic | 35.0% | |
| ACCACATACAATGCAAAACA+GGG | + | chr5.2:444099-444118 | None:intergenic | 35.0% | |
| ACCCATATGGGAAATATGTT+TGG | + | chr5.2:443657-443676 | None:intergenic | 35.0% | |
| ACCCTACAAGGATAAAAACT+GGG | - | chr5.2:448351-448370 | MS.gene40522:CDS | 35.0% | |
| ACTAGCAAATGTAACCCATA+TGG | + | chr5.2:443670-443689 | None:intergenic | 35.0% | |
| ACTGGAACAAAGATTAACTC+TGG | + | chr5.2:443217-443236 | None:intergenic | 35.0% | |
| AGAAAAATAAGGGTGGAGAA+TGG | + | chr5.2:446205-446224 | None:intergenic | 35.0% | |
| AGACTACCAGTGATGAAATT+CGG | + | chr5.2:443384-443403 | None:intergenic | 35.0% | |
| AGCGCTGTTGCATAAAAAAT+TGG | - | chr5.2:445015-445034 | MS.gene40522:CDS | 35.0% | |
| AGGGGAAGAGATAAATTTGT+TGG | - | chr5.2:448432-448451 | MS.gene40522:CDS | 35.0% | |
| ATAACACTAAAAGGGGTGAT+TGG | - | chr5.2:444029-444048 | MS.gene40522:intron | 35.0% | |
| ATCCACAGATATGCAAAAAG+AGG | - | chr5.2:445347-445366 | MS.gene40522:CDS | 35.0% | |
| ATGAGTGGTTATGTTAGGTA+GGG | + | chr5.2:447389-447408 | None:intergenic | 35.0% | |
| ATTGCAGTTCATCAGTTTGA+AGG | - | chr5.2:445113-445132 | MS.gene40522:intron | 35.0% | |
| ATTGCTCAAGAAATCAGAGT+CGG | - | chr5.2:443550-443569 | MS.gene40522:intron | 35.0% | |
| CAACATATGGCCGTTATTAT+TGG | - | chr5.2:446933-446952 | MS.gene40522:intron | 35.0% | |
| CAATACATAGTTTCGCTTAG+AGG | + | chr5.2:447471-447490 | None:intergenic | 35.0% | |
| CACTAAACTGTGATACTCTA+AGG | + | chr5.2:445916-445935 | None:intergenic | 35.0% | |
| CATGTAACCAAATCCTTGAA+AGG | + | chr5.2:442947-442966 | None:intergenic | 35.0% | |
| CCTATTAATCGTACTGAAAC+AGG | + | chr5.2:445733-445752 | None:intergenic | 35.0% | |
| CCTGTTTCAGTACGATTAAT+AGG | - | chr5.2:445730-445749 | MS.gene40522:CDS | 35.0% | |
| CTAGCAAATGTAACCCATAT+GGG | + | chr5.2:443669-443688 | None:intergenic | 35.0% | |
| CTTACAAACATGCCAAATAC+TGG | + | chr5.2:444770-444789 | None:intergenic | 35.0% | |
| GACATCTCTTAAACAAGATC+TGG | + | chr5.2:447291-447310 | None:intergenic | 35.0% | |
| GACTATAAATGTTCACTCTG+TGG | - | chr5.2:446519-446538 | MS.gene40522:intron | 35.0% | |
| GAGATGTTAAGAGAGAATTG+AGG | + | chr5.2:443898-443917 | None:intergenic | 35.0% | |
| GATTATACATCTCACAGACA+AGG | - | chr5.2:448115-448134 | MS.gene40522:intron | 35.0% | |
| GCACCAACACTTTCTATTAA+AGG | - | chr5.2:447556-447575 | MS.gene40522:intron | 35.0% | |
| GCCAAACATATTTCCCATAT+GGG | - | chr5.2:443653-443672 | MS.gene40522:intron | 35.0% | |
| GCGCTGTTGCATAAAAAATT+GGG | - | chr5.2:445016-445035 | MS.gene40522:CDS | 35.0% | |
| GCTACTTAGAAAAATAAGGG+TGG | + | chr5.2:446212-446231 | None:intergenic | 35.0% | |
| GGAGTAATCAAAGCTTATGA+TGG | - | chr5.2:446894-446913 | MS.gene40522:intron | 35.0% | |
| GGGGAAATGAAATACTTAGT+TGG | + | chr5.2:448533-448552 | None:intergenic | 35.0% | |
| GGTAAAACATACTGTCCATT+TGG | + | chr5.2:444316-444335 | None:intergenic | 35.0% | |
| GTAATCAAAGCTTATGATGG+TGG | - | chr5.2:446897-446916 | MS.gene40522:intron | 35.0% | |
| GTCTCAGATTTAGTCAGTTT+AGG | - | chr5.2:445162-445181 | MS.gene40522:intron | 35.0% | |
| GTTATGCACCAACTTAAACA+AGG | + | chr5.2:445867-445886 | None:intergenic | 35.0% | |
| GTTTATCTTTCAGGGAATTC+CGG | - | chr5.2:445059-445078 | MS.gene40522:intron | 35.0% | |
| TAACACTAAAAGGGGTGATT+GGG | - | chr5.2:444030-444049 | MS.gene40522:intron | 35.0% | |
| TAATAAGGACATGAGCAGAA+TGG | + | chr5.2:447500-447519 | None:intergenic | 35.0% | |
| TACAGTGATTTGACCAGAAA+AGG | - | chr5.2:443259-443278 | MS.gene40522:CDS | 35.0% | |
| TACTGTTGGTGCAAAAATGA+TGG | - | chr5.2:447853-447872 | MS.gene40522:intron | 35.0% | |
| TAGTGATTGTTTGATCACCT+GGG | - | chr5.2:444221-444240 | MS.gene40522:intron | 35.0% | |
| TATGATCCGAATTTCATCAC+TGG | - | chr5.2:443375-443394 | MS.gene40522:intron | 35.0% | |
| TCAGACATAAACAAGCCAAA+TGG | - | chr5.2:444298-444317 | MS.gene40522:intron | 35.0% | |
| TCATAGTATGAAATTTCCCC+AGG | + | chr5.2:444241-444260 | None:intergenic | 35.0% | |
| TGATGGAAAACAAAAAGGGA+CGG | - | chr5.2:447870-447889 | MS.gene40522:intron | 35.0% | |
| TGCCAAACATATTTCCCATA+TGG | - | chr5.2:443652-443671 | MS.gene40522:intron | 35.0% | |
| TGGTTTCTACAACCAGTATT+TGG | - | chr5.2:444755-444774 | MS.gene40522:CDS | 35.0% | |
| TGTTAGGTAGGGAAGATTAA+CGG | + | chr5.2:447378-447397 | None:intergenic | 35.0% | |
| TTATGTCTGAGCAAACCTAT+AGG | + | chr5.2:444288-444307 | None:intergenic | 35.0% | |
| TTTATACAGGCCAGGAAATT+TGG | - | chr5.2:443148-443167 | MS.gene40522:intron | 35.0% | |
| ! | ACTGAAAACTGCTTCTTTTG+AGG | - | chr5.2:445398-445417 | MS.gene40522:CDS | 35.0% |
| ! | ACTTTTCCGAAATCTTGCTT+GGG | + | chr5.2:444957-444976 | None:intergenic | 35.0% |
| ! | ATCCTCTTTTTGCATATCTG+TGG | + | chr5.2:445352-445371 | None:intergenic | 35.0% |
| ! | CAGCAATCGAATGATTGTTT+TGG | - | chr5.2:446257-446276 | MS.gene40522:intron | 35.0% |
| ! | CATGTGTTCCTTGTTTAAGT+TGG | - | chr5.2:445856-445875 | MS.gene40522:intron | 35.0% |
| ! | CTTAGAGTATCACAGTTTAG+TGG | - | chr5.2:445914-445933 | MS.gene40522:intron | 35.0% |
| ! | GGAAATGATAATGTTGTGGT+TGG | - | chr5.2:446494-446513 | MS.gene40522:intron | 35.0% |
| ! | GTAGCATGCATGAAGTTTTA+AGG | - | chr5.2:447041-447060 | MS.gene40522:CDS | 35.0% |
| ! | GTCAGGAAATGATAATGTTG+TGG | - | chr5.2:446490-446509 | MS.gene40522:intron | 35.0% |
| ! | TAATGAAGCTTTATCCACAG+AGG | + | chr5.2:445497-445516 | None:intergenic | 35.0% |
| ! | TACTTTTCCGAAATCTTGCT+TGG | + | chr5.2:444958-444977 | None:intergenic | 35.0% |
| ! | TCCCAGTTTTTATCCTTGTA+GGG | + | chr5.2:448355-448374 | None:intergenic | 35.0% |
| ! | TGACAGTTGTTTCATTCAAC+AGG | + | chr5.2:448651-448670 | None:intergenic | 35.0% |
| ! | TGACTTCACATTTTCTCGTA+AGG | - | chr5.2:446738-446757 | MS.gene40522:intron | 35.0% |
| ! | TGTATGAACATTAGTCTAGC+TGG | + | chr5.2:444708-444727 | None:intergenic | 35.0% |
| ! | TTCTCAGTTTGAGTTTCACT+AGG | + | chr5.2:448474-448493 | None:intergenic | 35.0% |
| ! | TTGACATTTTGCTCTCCTAT+AGG | - | chr5.2:444270-444289 | MS.gene40522:intron | 35.0% |
| !! | AAATATCGGTATTGACGTGT+TGG | - | chr5.2:447764-447783 | MS.gene40522:intron | 35.0% |
| !! | ATGATTTGTTCAAGTCCCTT+GGG | - | chr5.2:445535-445554 | MS.gene40522:intron | 35.0% |
| !! | ATTTTTGTGATGGGGATGTT+GGG | - | chr5.2:447528-447547 | MS.gene40522:intron | 35.0% |
| !! | GATAAATTTGTTGGAAGGCA+AGG | - | chr5.2:448441-448460 | MS.gene40522:CDS | 35.0% |
| !! | GATTGATAGTGTTGACAGAT+TGG | - | chr5.2:444516-444535 | MS.gene40522:intron | 35.0% |
| !! | GGTTACTGAACGTATTTTGA+AGG | - | chr5.2:444551-444570 | MS.gene40522:intron | 35.0% |
| !! | TACTTCTTGTTGTTGTGAGA+TGG | + | chr5.2:447313-447332 | None:intergenic | 35.0% |
| !! | TATGATTTGTTCAAGTCCCT+TGG | - | chr5.2:445534-445553 | MS.gene40522:intron | 35.0% |
| !! | TTGATAGTGTTGACAGATTG+GGG | - | chr5.2:444518-444537 | MS.gene40522:intron | 35.0% |
| !!! | ATGATTGTTTTGGCTGATTG+AGG | - | chr5.2:446267-446286 | MS.gene40522:intron | 35.0% |
| AAACCACGACAAATGGTAAG+AGG | + | chr5.2:446674-446693 | None:intergenic | 40.0% | |
| AACAGACCTTTCTGATAGGA+AGG | + | chr5.2:444375-444394 | None:intergenic | 40.0% | |
| AAGCAGCAATCCATACCATT+TGG | - | chr5.2:448294-448313 | MS.gene40522:intron | 40.0% | |
| AAGCATCTGTTCCGATTCAA+AGG | - | chr5.2:446637-446656 | MS.gene40522:intron | 40.0% | |
| AAGTAACGCATGTGGATGTA+AGG | + | chr5.2:443719-443738 | None:intergenic | 40.0% | |
| AATCGTGTTTCTTCCAGTCA+GGG | - | chr5.2:446775-446794 | MS.gene40522:CDS | 40.0% | |
| ACAGACCTTTCTGATAGGAA+GGG | + | chr5.2:444374-444393 | None:intergenic | 40.0% | |
| ACATAACACATATCCCCCAA+GGG | + | chr5.2:445553-445572 | None:intergenic | 40.0% | |
| ACCTTAGCAAGTAAGCGATT+CGG | + | chr5.2:443619-443638 | None:intergenic | 40.0% | |
| ACTGCACTTGCACATTAATC+AGG | - | chr5.2:443799-443818 | MS.gene40522:intron | 40.0% | |
| AGAAAGGAAAGAAAGGAAGG+AGG | - | chr5.2:448267-448286 | MS.gene40522:intron | 40.0% | |
| AGAACGAACTCCAAATTTCC+TGG | + | chr5.2:443161-443180 | None:intergenic | 40.0% | |
| AGGGAAGATTAACGGTAAGT+CGG | + | chr5.2:447370-447389 | None:intergenic | 40.0% | |
| AGTGATTGTTTGATCACCTG+GGG | - | chr5.2:444222-444241 | MS.gene40522:intron | 40.0% | |
| AGTTTAACCATCGTCCAGAA+AGG | - | chr5.2:448251-448270 | MS.gene40522:intron | 40.0% | |
| ATACCTCTTACCATTTGTCG+TGG | - | chr5.2:446668-446687 | MS.gene40522:intron | 40.0% | |
| ATAGTCTTCTGTGTAGGATC+AGG | + | chr5.2:445959-445978 | None:intergenic | 40.0% | |
| ATCGTCCAGAAAGGAAAGAA+AGG | - | chr5.2:448260-448279 | MS.gene40522:intron | 40.0% | |
| ATGCAAAAAGAGGATCTGCA+TGG | - | chr5.2:445357-445376 | MS.gene40522:CDS | 40.0% | |
| ATTACCAAAGCTCCACTCTT+CGG | - | chr5.2:446149-446168 | MS.gene40522:intron | 40.0% | |
| ATTCTCCCCAAGCAAGATTT+CGG | - | chr5.2:444948-444967 | MS.gene40522:CDS | 40.0% | |
| CAAAAGTTGTCTCACAAGGA+GGG | - | chr5.2:446838-446857 | MS.gene40522:CDS | 40.0% | |
| CAACCTGATAAATACAGCAG+AGG | + | chr5.2:446329-446348 | None:intergenic | 40.0% | |
| CACATACAACAGACATGACA+CGG | + | chr5.2:447793-447812 | None:intergenic | 40.0% | |
| CACCCTACAAGGATAAAAAC+TGG | - | chr5.2:448350-448369 | MS.gene40522:CDS | 40.0% | |
| CAGCAAGAACCCTCTTATAT+TGG | + | chr5.2:445809-445828 | None:intergenic | 40.0% | |
| CTCAAACAGACCTTTCTGAT+AGG | + | chr5.2:444379-444398 | None:intergenic | 40.0% | |
| CTCTGCTGTATTTATCAGGT+TGG | - | chr5.2:446327-446346 | MS.gene40522:intron | 40.0% | |
| CTGCAAACATAAGCTTTGCA+TGG | + | chr5.2:445308-445327 | None:intergenic | 40.0% | |
| CTGGCCTGTATAAAGACAAA+AGG | + | chr5.2:443142-443161 | None:intergenic | 40.0% | |
| CTTTCCTCAACAAAACTTGG+AGG | + | chr5.2:446555-446574 | None:intergenic | 40.0% | |
| GAAACTGATCTTTCCCTTGA+CGG | - | chr5.2:446064-446083 | MS.gene40522:CDS | 40.0% | |
| GAAAGACCTTCATTCACAGA+AGG | - | chr5.2:448052-448071 | MS.gene40522:intron | 40.0% | |
| GAAGCAAAAGTTGTCTCACA+AGG | - | chr5.2:446834-446853 | MS.gene40522:CDS | 40.0% | |
| GAATTTCATCACTGGTAGTC+TGG | - | chr5.2:443383-443402 | MS.gene40522:intron | 40.0% | |
| GACGAAGGAAACCTCATAAT+TGG | + | chr5.2:443069-443088 | None:intergenic | 40.0% | |
| GATATCCACTGCCAATTATG+AGG | - | chr5.2:443055-443074 | MS.gene40522:intron | 40.0% | |
| GCTTTGCATGGTTCATTTGT+TGG | + | chr5.2:445296-445315 | None:intergenic | 40.0% | |
| GGATAAAAACTGGGAGAATC+AGG | - | chr5.2:448360-448379 | MS.gene40522:CDS | 40.0% | |
| GTAGTGATTGTTTGATCACC+TGG | - | chr5.2:444220-444239 | MS.gene40522:intron | 40.0% | |
| GTGAAACTCAAACTGAGAAG+TGG | - | chr5.2:448475-448494 | MS.gene40522:CDS | 40.0% | |
| TAATCGTGTTTCTTCCAGTC+AGG | - | chr5.2:446774-446793 | MS.gene40522:CDS | 40.0% | |
| TATACATCTCACAGACAAGG+TGG | - | chr5.2:448118-448137 | MS.gene40522:intron | 40.0% | |
| TATGTAACCTCTAAGCTGCT+AGG | - | chr5.2:446993-447012 | MS.gene40522:intron | 40.0% | |
| TCAACAACAGTTGCCCAATT+TGG | - | chr5.2:443981-444000 | MS.gene40522:intron | 40.0% | |
| TCATCTGCAAATTGCTTCTC+AGG | + | chr5.2:448325-448344 | None:intergenic | 40.0% | |
| TCCAGAAAGGAAAGAAAGGA+AGG | - | chr5.2:448264-448283 | MS.gene40522:intron | 40.0% | |
| TCCTCAAGGCCAATATAAGA+GGG | - | chr5.2:445797-445816 | MS.gene40522:intron | 40.0% | |
| TCCTTCCTTTCTTTCCTTTC+TGG | + | chr5.2:448268-448287 | None:intergenic | 40.0% | |
| TCTCTTCCTTCTGTGAATGA+AGG | + | chr5.2:448061-448080 | None:intergenic | 40.0% | |
| TGAAAGTCATAACAGCCAAG+CGG | + | chr5.2:444345-444364 | None:intergenic | 40.0% | |
| TGATAGGCCTAATTCTTGTC+AGG | - | chr5.2:446473-446492 | MS.gene40522:CDS | 40.0% | |
| TGCAAAAAGAGGATCTGCAT+GGG | - | chr5.2:445358-445377 | MS.gene40522:CDS | 40.0% | |
| TGCAAAGCTTATGTTTGCAG+CGG | - | chr5.2:445308-445327 | MS.gene40522:CDS | 40.0% | |
| TGGGATCAACTTCTTTCCAA+GGG | - | chr5.2:446403-446422 | MS.gene40522:CDS | 40.0% | |
| TGTCCTCTGCTGTATTTATC+AGG | - | chr5.2:446323-446342 | MS.gene40522:intron | 40.0% | |
| TTACTTCAGGAGAAGCCAAT+TGG | - | chr5.2:445990-446009 | MS.gene40522:intron | 40.0% | |
| TTCCCAAACATCAAGCTGAA+GGG | - | chr5.2:448030-448049 | MS.gene40522:CDS | 40.0% | |
| TTCCCTTCAGCTTGATGTTT+GGG | + | chr5.2:448035-448054 | None:intergenic | 40.0% | |
| TTTCCCTTCAGCTTGATGTT+TGG | + | chr5.2:448036-448055 | None:intergenic | 40.0% | |
| TTTCTGGACGATGGTTAAAC+TGG | + | chr5.2:448252-448271 | None:intergenic | 40.0% | |
| TTTCTTTCCTTTCTGGACGA+TGG | + | chr5.2:448261-448280 | None:intergenic | 40.0% | |
| TTTGAATCGGAACAGATGCT+TGG | + | chr5.2:446638-446657 | None:intergenic | 40.0% | |
| ! | AGTTCTAATGCCGAAAATGG+AGG | - | chr5.2:447904-447923 | MS.gene40522:intron | 40.0% |
| ! | CAGGTTTTGCGTCAATAGAA+AGG | - | chr5.2:448379-448398 | MS.gene40522:CDS | 40.0% |
| ! | CAGTTTAGTGGACAAAAGTG+TGG | - | chr5.2:445926-445945 | MS.gene40522:intron | 40.0% |
| ! | CTCCCAGTTTTTATCCTTGT+AGG | + | chr5.2:448356-448375 | None:intergenic | 40.0% |
| ! | CTTTTCCGAAATCTTGCTTG+GGG | + | chr5.2:444956-444975 | None:intergenic | 40.0% |
| ! | CTTTTGTCTTTATACAGGCC+AGG | - | chr5.2:443140-443159 | MS.gene40522:intron | 40.0% |
| ! | GATAGCAGAGATCCTTTTGA+TGG | - | chr5.2:446106-446125 | MS.gene40522:intron | 40.0% |
| ! | GTGAGACAACTTTTGCTTCT+TGG | + | chr5.2:446833-446852 | None:intergenic | 40.0% |
| ! | TACTCTGTGGGTTTAGGTTT+GGG | - | chr5.2:444917-444936 | MS.gene40522:CDS | 40.0% |
| ! | TCCATTTTCGGCATTAGAAC+TGG | + | chr5.2:447905-447924 | None:intergenic | 40.0% |
| ! | TCCCTGTTTTGCATTGTATG+TGG | - | chr5.2:444095-444114 | MS.gene40522:intron | 40.0% |
| ! | TGCGTCAATAGAAAGGCATA+GGG | - | chr5.2:448386-448405 | MS.gene40522:CDS | 40.0% |
| ! | TGTTTTACCAAATGACCGCT+TGG | - | chr5.2:444327-444346 | MS.gene40522:intron | 40.0% |
| ! | TTACTCTGTGGGTTTAGGTT+TGG | - | chr5.2:444916-444935 | MS.gene40522:CDS | 40.0% |
| ! | TTGCGTCAATAGAAAGGCAT+AGG | - | chr5.2:448385-448404 | MS.gene40522:CDS | 40.0% |
| ! | TTTGAAGCAACTCGGCAAAA+TGG | + | chr5.2:446596-446615 | None:intergenic | 40.0% |
| ! | TTTTGCCGAGTTGCTTCAAA+AGG | - | chr5.2:446596-446615 | MS.gene40522:intron | 40.0% |
| !! | GATTTTTGTGATGGGGATGT+TGG | - | chr5.2:447527-447546 | MS.gene40522:intron | 40.0% |
| !! | GGAAAAGTATCAGCAATGAG+AGG | - | chr5.2:444969-444988 | MS.gene40522:CDS | 40.0% |
| !! | TGATAGTGTTGACAGATTGG+GGG | - | chr5.2:444519-444538 | MS.gene40522:intron | 40.0% |
| !! | TGATTTGTTCAAGTCCCTTG+GGG | - | chr5.2:445536-445555 | MS.gene40522:intron | 40.0% |
| !! | TGCAGTTTGTTACACATGCA+TGG | - | chr5.2:445186-445205 | MS.gene40522:intron | 40.0% |
| !!! | ACTTCCTCCAAGTTTTGTTG+AGG | - | chr5.2:446548-446567 | MS.gene40522:intron | 40.0% |
| !!! | CTGTTCCTTTTGAAGCAACT+CGG | + | chr5.2:446604-446623 | None:intergenic | 40.0% |
| !!! | CTTTTTTCTCAGTCAACAGC+CGG | - | chr5.2:444633-444652 | MS.gene40522:intron | 40.0% |
| AAGCGTAGAAGTAACGCATG+TGG | + | chr5.2:443727-443746 | None:intergenic | 45.0% | |
| AATTAGGCCTATCATCCTCC+AGG | + | chr5.2:446467-446486 | None:intergenic | 45.0% | |
| ACAACTGTCACATTCAGCAG+AGG | - | chr5.2:448661-448680 | MS.gene40522:intron | 45.0% | |
| ACCTGCATTCAGGAAGAAGA+AGG | - | chr5.2:448186-448205 | MS.gene40522:CDS | 45.0% | |
| ACCTTCTTCTTCCTGAATGC+AGG | + | chr5.2:448190-448209 | None:intergenic | 45.0% | |
| AGAAAGTCACTGTCGCAACT+AGG | + | chr5.2:444454-444473 | None:intergenic | 45.0% | |
| AGTGGATGTACAGAGGTTCT+GGG | - | chr5.2:446384-446403 | MS.gene40522:CDS | 45.0% | |
| ATAACAGCCAAGCGGTCATT+TGG | + | chr5.2:444337-444356 | None:intergenic | 45.0% | |
| ATCCTCCCTTCCTATCAGAA+AGG | - | chr5.2:444366-444385 | MS.gene40522:intron | 45.0% | |
| ATGTGAGCAGATGCTGGATA+AGG | - | chr5.2:444593-444612 | MS.gene40522:intron | 45.0% | |
| CACATAACACATATCCCCCA+AGG | + | chr5.2:445554-445573 | None:intergenic | 45.0% | |
| CACATTCAGCAGAGGTTATC+TGG | - | chr5.2:448669-448688 | MS.gene40522:intron | 45.0% | |
| CATTGACACATGTCAGACAC+TGG | + | chr5.2:447690-447709 | None:intergenic | 45.0% | |
| CTAATCTCCTGGAGGATGAT+AGG | - | chr5.2:446457-446476 | MS.gene40522:CDS | 45.0% | |
| CTGGGATCAACTTCTTTCCA+AGG | - | chr5.2:446402-446421 | MS.gene40522:CDS | 45.0% | |
| CTTCCCAAACATCAAGCTGA+AGG | - | chr5.2:448029-448048 | MS.gene40522:CDS | 45.0% | |
| CTTGGGGGATATGTGTTATG+TGG | - | chr5.2:445552-445571 | MS.gene40522:intron | 45.0% | |
| GATCTCTAGCATGCTGATGA+TGG | + | chr5.2:448629-448648 | None:intergenic | 45.0% | |
| GCAAAAGTTGTCTCACAAGG+AGG | - | chr5.2:446837-446856 | MS.gene40522:CDS | 45.0% | |
| GCTCTAGCAGTGAGAGATTT+GGG | - | chr5.2:447019-447038 | MS.gene40522:intron | 45.0% | |
| GGAAACCTCATAATTGGCAG+TGG | + | chr5.2:443063-443082 | None:intergenic | 45.0% | |
| GGCAATTAAGATGGTCCTCA+AGG | - | chr5.2:445783-445802 | MS.gene40522:intron | 45.0% | |
| GGCAGTGGATATCATAGACA+TGG | + | chr5.2:443048-443067 | None:intergenic | 45.0% | |
| GTAACCCTATGTTAAAGGGC+AGG | - | chr5.2:443006-443025 | MS.gene40522:intron | 45.0% | |
| GTCCTCAAGGCCAATATAAG+AGG | - | chr5.2:445796-445815 | MS.gene40522:intron | 45.0% | |
| GTCGGCATTTATGAAGAGAC+TGG | - | chr5.2:443568-443587 | MS.gene40522:intron | 45.0% | |
| TAACCACAGTGGATGTACAG+AGG | - | chr5.2:446377-446396 | MS.gene40522:CDS | 45.0% | |
| TATGTTAAAGGGCAGGCCAA+TGG | - | chr5.2:443013-443032 | MS.gene40522:intron | 45.0% | |
| TCAGGTCTGTCCAAATGGTA+TGG | + | chr5.2:448307-448326 | None:intergenic | 45.0% | |
| TCCACTCTTCGGAAAACTGA+TGG | - | chr5.2:446160-446179 | MS.gene40522:intron | 45.0% | |
| TCTTTCCAAGGGCAGTTTGA+GGG | - | chr5.2:446414-446433 | MS.gene40522:CDS | 45.0% | |
| TGCTCTAGCAGTGAGAGATT+TGG | - | chr5.2:447018-447037 | MS.gene40522:intron | 45.0% | |
| TGGAAAACAAAAAGGGACGG+CGG | - | chr5.2:447873-447892 | MS.gene40522:intron | 45.0% | |
| TGGGAAGCGATGATAATCGA+TGG | - | chr5.2:442565-442584 | MS.gene40522:CDS | 45.0% | |
| TGTGAGCAGATGCTGGATAA+GGG | - | chr5.2:444594-444613 | MS.gene40522:intron | 45.0% | |
| TTAACGTCTCCTGAATCCAC+TGG | + | chr5.2:448214-448233 | None:intergenic | 45.0% | |
| TTACTTCTACGCTTGCCACT+TGG | - | chr5.2:443733-443752 | MS.gene40522:intron | 45.0% | |
| TTCTTTCCAAGGGCAGTTTG+AGG | - | chr5.2:446413-446432 | MS.gene40522:CDS | 45.0% | |
| TTGGCCTGCCCTTTAACATA+GGG | + | chr5.2:443013-443032 | None:intergenic | 45.0% | |
| ! | AAACAGACTCAAAGGGGTGT+GGG | - | chr5.2:447235-447254 | MS.gene40522:intron | 45.0% |
| ! | AAGAAGGTTCCAGTGGATTC+AGG | - | chr5.2:448202-448221 | MS.gene40522:CDS | 45.0% |
| ! | ACCATCAGTTTTCCGAAGAG+TGG | + | chr5.2:446164-446183 | None:intergenic | 45.0% |
| ! | ACCGAATCGCTTACTTGCTA+AGG | - | chr5.2:443615-443634 | MS.gene40522:intron | 45.0% |
| ! | ATTGGCCTGCCCTTTAACAT+AGG | + | chr5.2:443014-443033 | None:intergenic | 45.0% |
| ! | GAAAACTGATGGTGCAGAGA+AGG | - | chr5.2:446171-446190 | MS.gene40522:intron | 45.0% |
| ! | GATGCAAGTTCTAACCACAG+TGG | - | chr5.2:446366-446385 | MS.gene40522:intron | 45.0% |
| ! | GATTTGTTCAAGTCCCTTGG+GGG | - | chr5.2:445537-445556 | MS.gene40522:intron | 45.0% |
| ! | GCCAGTTCTAATGCCGAAAA+TGG | - | chr5.2:447901-447920 | MS.gene40522:intron | 45.0% |
| ! | GCGTCAATAGAAAGGCATAG+GGG | - | chr5.2:448387-448406 | MS.gene40522:CDS | 45.0% |
| ! | GGGTTTAGGTTTGGGAAAGA+CGG | - | chr5.2:444925-444944 | MS.gene40522:CDS | 45.0% |
| ! | TTTTCCGAAGAGTGGAGCTT+TGG | + | chr5.2:446156-446175 | None:intergenic | 45.0% |
| ! | TTTTTCCCTCAAACTGCCCT+TGG | + | chr5.2:446422-446441 | None:intergenic | 45.0% |
| !! | ACCCTCTTATATTGGCCTTG+AGG | + | chr5.2:445801-445820 | None:intergenic | 45.0% |
| !! | GAATAACGGGTCTAATCTCC+TGG | - | chr5.2:446446-446465 | MS.gene40522:CDS | 45.0% |
| !! | GTGATACTCTAAGGCCTAAG+AGG | + | chr5.2:445907-445926 | None:intergenic | 45.0% |
| !!! | TCATTTTTTTAAAATTTTAT+TGG | - | chr5.2:447632-447651 | MS.gene40522:intron | 5.0% |
| AAGCACATGTGAGCAGATGC+TGG | - | chr5.2:444587-444606 | MS.gene40522:intron | 50.0% | |
| AAGCTTCTCGCGACCTTTCA+AGG | - | chr5.2:442931-442950 | MS.gene40522:intron | 50.0% | |
| ACAATCAACCTCCTACCTCG+AGG | - | chr5.2:448158-448177 | MS.gene40522:CDS | 50.0% | |
| AGCTGAGGAGAATCTGCACA+AGG | - | chr5.2:447974-447993 | MS.gene40522:CDS | 50.0% | |
| AGCTTCCGTGCAATAAACCC+AGG | + | chr5.2:443190-443209 | None:intergenic | 50.0% | |
| ATCTGTGTGCCTACCGTCAA+GGG | + | chr5.2:446080-446099 | None:intergenic | 50.0% | |
| ATGCAACAGCGCTTCATCCT+CGG | + | chr5.2:445008-445027 | None:intergenic | 50.0% | |
| ATGCTGGCAATGGCAATTCC+AGG | - | chr5.2:448412-448431 | MS.gene40522:CDS | 50.0% | |
| CAAACAGACTCAAAGGGGTG+TGG | - | chr5.2:447234-447253 | MS.gene40522:intron | 50.0% | |
| CAGGAAGAAGAAGGTTCCAG+TGG | - | chr5.2:448195-448214 | MS.gene40522:CDS | 50.0% | |
| CAGTGGATGTACAGAGGTTC+TGG | - | chr5.2:446383-446402 | MS.gene40522:CDS | 50.0% | |
| CCATGCCTGGGTTTATTGCA+CGG | - | chr5.2:443182-443201 | MS.gene40522:intron | 50.0% | |
| CGAGGAAAAGACCTGCATTC+AGG | - | chr5.2:448176-448195 | MS.gene40522:CDS | 50.0% | |
| CTCGCGACCTTTCAAGGATT+TGG | - | chr5.2:442937-442956 | MS.gene40522:intron | 50.0% | |
| CTGATCTTTCCCTTGACGGT+AGG | - | chr5.2:446068-446087 | MS.gene40522:intron | 50.0% | |
| CTGTATCAGCGACAAAGTCG+TGG | + | chr5.2:446045-446064 | None:intergenic | 50.0% | |
| GAACCTCTGTACATCCACTG+TGG | + | chr5.2:446383-446402 | None:intergenic | 50.0% | |
| GACCACTCTGCGCTAAATGA+AGG | + | chr5.2:448772-448791 | None:intergenic | 50.0% | |
| GACCTTTCTGATAGGAAGGG+AGG | + | chr5.2:444371-444390 | None:intergenic | 50.0% | |
| GAGCAATCCTAGCAGCTTAG+AGG | + | chr5.2:447003-447022 | None:intergenic | 50.0% | |
| GCTTCTCAGGTCTGTCCAAA+TGG | + | chr5.2:448312-448331 | None:intergenic | 50.0% | |
| GGAGAATCTGCACAAGGATG+TGG | - | chr5.2:447980-447999 | MS.gene40522:CDS | 50.0% | |
| GGTGCAATGCATGAGACTGA+CGG | + | chr5.2:447939-447958 | None:intergenic | 50.0% | |
| GTCAGACACTGGACACAACA+TGG | + | chr5.2:447679-447698 | None:intergenic | 50.0% | |
| GTTTACACTAGCGCGAAAGC+AGG | - | chr5.2:442603-442622 | MS.gene40522:CDS | 50.0% | |
| TGCCTTCATTTAGCGCAGAG+TGG | - | chr5.2:448767-448786 | MS.gene40522:CDS | 50.0% | |
| TGCTGGCAATGGCAATTCCA+GGG | - | chr5.2:448413-448432 | MS.gene40522:CDS | 50.0% | |
| ! | ACTGGTCTCACATGTAGTGC+TGG | - | chr5.2:443586-443605 | MS.gene40522:intron | 50.0% |
| ! | AGATGACAGAGCACCCTACA+AGG | - | chr5.2:448339-448358 | MS.gene40522:CDS | 50.0% |
| ! | GAATGCAGGTCTTTTCCTCG+AGG | + | chr5.2:448176-448195 | None:intergenic | 50.0% |
| ! | GCGTCTGTGACCTCCATTTT+CGG | + | chr5.2:447917-447936 | None:intergenic | 50.0% |
| ! | TAACGGGTCTAATCTCCTGG+AGG | - | chr5.2:446449-446468 | MS.gene40522:CDS | 50.0% |
| ! | TCTCACATGTAGTGCTGGAG+TGG | - | chr5.2:443591-443610 | MS.gene40522:intron | 50.0% |
| ! | TGTTGACAGATTGGGGGCAT+CGG | - | chr5.2:444525-444544 | MS.gene40522:intron | 50.0% |
| ! | TTTGTGATGGGGATGTTGGG+CGG | - | chr5.2:447531-447550 | MS.gene40522:intron | 50.0% |
| !! | CTTTATCCACAGAGGTACCC+AGG | + | chr5.2:445489-445508 | None:intergenic | 50.0% |
| !! | GCTTCAGTCCCTGCTGATTT+AGG | - | chr5.2:448691-448710 | MS.gene40522:intron | 50.0% |
| !! | TCAGTCCCTGCTGATTTAGG+CGG | - | chr5.2:448694-448713 | MS.gene40522:intron | 50.0% |
| AGCGCGAAAGCAGGAATGGA+AGG | - | chr5.2:442612-442631 | MS.gene40522:CDS | 55.0% | |
| CACTAGCGCGAAAGCAGGAA+TGG | - | chr5.2:442608-442627 | MS.gene40522:CDS | 55.0% | |
| CATAGGGGCAATGCTGGCAA+TGG | - | chr5.2:448402-448421 | MS.gene40522:CDS | 55.0% | |
| CCGTGCAATAAACCCAGGCA+TGG | + | chr5.2:443185-443204 | None:intergenic | 55.0% | |
| CCTGTCCGCCTAAATCAGCA+GGG | + | chr5.2:448702-448721 | None:intergenic | 55.0% | |
| GAGTTCGTTCTGCCATGCCT+GGG | - | chr5.2:443170-443189 | MS.gene40522:intron | 55.0% | |
| GATCTGTGTGCCTACCGTCA+AGG | + | chr5.2:446081-446100 | None:intergenic | 55.0% | |
| GCTGGCAATGGCAATTCCAG+GGG | - | chr5.2:448414-448433 | MS.gene40522:CDS | 55.0% | |
| TCCTGTCCGCCTAAATCAGC+AGG | + | chr5.2:448703-448722 | None:intergenic | 55.0% | |
| ! | GAAAGGCATAGGGGCAATGC+TGG | - | chr5.2:448396-448415 | MS.gene40522:CDS | 55.0% |
| ! | GACATGGTGCCAACAGCCAT+TGG | + | chr5.2:443032-443051 | None:intergenic | 55.0% |
| ! | GCAGGTCTTTTCCTCGAGGT+AGG | + | chr5.2:448172-448191 | None:intergenic | 55.0% |
| ! | GGTCTTTTCCTCGAGGTAGG+AGG | + | chr5.2:448169-448188 | None:intergenic | 55.0% |
| ! | TATTGGCCTGGGTACCTCTG+TGG | - | chr5.2:445480-445499 | MS.gene40522:CDS | 55.0% |
| !! | ACAGATTGGGGGCATCGGTA+AGG | - | chr5.2:444530-444549 | MS.gene40522:intron | 55.0% |
| AAGGGCAGGCCAATGGCTGT+TGG | - | chr5.2:443020-443039 | MS.gene40522:intron | 60.0% | |
| AGCGCAGAGTGGTCTGCAGT+TGG | - | chr5.2:448778-448797 | MS.gene40522:CDS | 60.0% | |
| CAACAGCGCTTCATCCTCGG+TGG | + | chr5.2:445005-445024 | None:intergenic | 60.0% | |
| GGAGTTCGTTCTGCCATGCC+TGG | - | chr5.2:443169-443188 | MS.gene40522:intron | 60.0% | |
| ! | GAGGACGTTTTCTGCCACCG+AGG | - | chr5.2:444988-445007 | MS.gene40522:CDS | 60.0% |
| ! | TCGGTGCTTCTGACCCTGAC+TGG | + | chr5.2:446791-446810 | None:intergenic | 60.0% |
| !! | CCCTGCTGATTTAGGCGGAC+AGG | - | chr5.2:448699-448718 | MS.gene40522:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 442564 | 448849 | 442564 | ID=MS.gene40522 |
| chr5.2 | mRNA | 442564 | 448849 | 442564 | ID=MS.gene40522.t1;Parent=MS.gene40522 |
| chr5.2 | exon | 448763 | 448849 | 448763 | ID=MS.gene40522.t1.exon1;Parent=MS.gene40522.t1 |
| chr5.2 | CDS | 448763 | 448849 | 448763 | ID=cds.MS.gene40522.t1;Parent=MS.gene40522.t1 |
| chr5.2 | exon | 448337 | 448510 | 448337 | ID=MS.gene40522.t1.exon2;Parent=MS.gene40522.t1 |
| chr5.2 | CDS | 448337 | 448510 | 448337 | ID=cds.MS.gene40522.t1;Parent=MS.gene40522.t1 |
| chr5.2 | exon | 448133 | 448256 | 448133 | ID=MS.gene40522.t1.exon3;Parent=MS.gene40522.t1 |
| chr5.2 | CDS | 448133 | 448256 | 448133 | ID=cds.MS.gene40522.t1;Parent=MS.gene40522.t1 |
| chr5.2 | exon | 447949 | 448049 | 447949 | ID=MS.gene40522.t1.exon4;Parent=MS.gene40522.t1 |
| chr5.2 | CDS | 447949 | 448049 | 447949 | ID=cds.MS.gene40522.t1;Parent=MS.gene40522.t1 |
| chr5.2 | exon | 447777 | 447863 | 447777 | ID=MS.gene40522.t1.exon5;Parent=MS.gene40522.t1 |
| chr5.2 | CDS | 447777 | 447863 | 447777 | ID=cds.MS.gene40522.t1;Parent=MS.gene40522.t1 |
| chr5.2 | exon | 447026 | 447121 | 447026 | ID=MS.gene40522.t1.exon6;Parent=MS.gene40522.t1 |
| chr5.2 | CDS | 447026 | 447121 | 447026 | ID=cds.MS.gene40522.t1;Parent=MS.gene40522.t1 |
| chr5.2 | exon | 446759 | 446879 | 446759 | ID=MS.gene40522.t1.exon7;Parent=MS.gene40522.t1 |
| chr5.2 | CDS | 446759 | 446879 | 446759 | ID=cds.MS.gene40522.t1;Parent=MS.gene40522.t1 |
| chr5.2 | exon | 446376 | 446504 | 446376 | ID=MS.gene40522.t1.exon8;Parent=MS.gene40522.t1 |
| chr5.2 | CDS | 446376 | 446504 | 446376 | ID=cds.MS.gene40522.t1;Parent=MS.gene40522.t1 |
| chr5.2 | exon | 445994 | 446085 | 445994 | ID=MS.gene40522.t1.exon9;Parent=MS.gene40522.t1 |
| chr5.2 | CDS | 445994 | 446085 | 445994 | ID=cds.MS.gene40522.t1;Parent=MS.gene40522.t1 |
| chr5.2 | exon | 445662 | 445773 | 445662 | ID=MS.gene40522.t1.exon10;Parent=MS.gene40522.t1 |
| chr5.2 | CDS | 445662 | 445773 | 445662 | ID=cds.MS.gene40522.t1;Parent=MS.gene40522.t1 |
| chr5.2 | exon | 445221 | 445501 | 445221 | ID=MS.gene40522.t1.exon11;Parent=MS.gene40522.t1 |
| chr5.2 | CDS | 445221 | 445501 | 445221 | ID=cds.MS.gene40522.t1;Parent=MS.gene40522.t1 |
| chr5.2 | exon | 444755 | 445068 | 444755 | ID=MS.gene40522.t1.exon12;Parent=MS.gene40522.t1 |
| chr5.2 | CDS | 444755 | 445068 | 444755 | ID=cds.MS.gene40522.t1;Parent=MS.gene40522.t1 |
| chr5.2 | exon | 443185 | 443281 | 443185 | ID=MS.gene40522.t1.exon13;Parent=MS.gene40522.t1 |
| chr5.2 | CDS | 443185 | 443281 | 443185 | ID=cds.MS.gene40522.t1;Parent=MS.gene40522.t1 |
| chr5.2 | exon | 442564 | 442794 | 442564 | ID=MS.gene40522.t1.exon14;Parent=MS.gene40522.t1 |
| chr5.2 | CDS | 442564 | 442794 | 442564 | ID=cds.MS.gene40522.t1;Parent=MS.gene40522.t1 |
| Gene Sequence |
| Protein sequence |
