Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40674.t1 | KEH30386.1 | 98.5 | 599 | 9 | 0 | 1 | 599 | 1 | 599 | 0.00E+00 | 1179.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40674.t1 | Q949V6 | 63.0 | 587 | 186 | 9 | 30 | 599 | 25 | 597 | 5.0e-217 | 755.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40674.t1 | A0A072ULZ9 | 98.5 | 599 | 9 | 0 | 1 | 599 | 1 | 599 | 0.0e+00 | 1179.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050084 | MS.gene40674 | 0.808738 | 2.67E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40674.t1 | MTR_4g068940 | 98.664 | 599 | 8 | 0 | 1 | 599 | 1 | 599 | 0.0 | 1234 |
| MS.gene40674.t1 | MTR_4g068940 | 96.160 | 599 | 7 | 1 | 1 | 599 | 1 | 583 | 0.0 | 1194 |
| MS.gene40674.t1 | MTR_4g066650 | 30.143 | 491 | 303 | 12 | 48 | 520 | 61 | 529 | 2.39e-61 | 214 |
| MS.gene40674.t1 | MTR_2g098580 | 28.717 | 491 | 310 | 12 | 48 | 520 | 71 | 539 | 4.53e-60 | 210 |
| MS.gene40674.t1 | MTR_3g065380 | 28.067 | 538 | 339 | 14 | 49 | 564 | 57 | 568 | 5.78e-58 | 205 |
| MS.gene40674.t1 | MTR_3g065410 | 28.361 | 543 | 331 | 18 | 49 | 563 | 55 | 567 | 1.57e-54 | 195 |
| MS.gene40674.t1 | MTR_4g075010 | 27.119 | 472 | 260 | 16 | 48 | 495 | 7 | 418 | 3.25e-38 | 149 |
| MS.gene40674.t1 | MTR_5g097670 | 29.721 | 323 | 195 | 8 | 214 | 520 | 4 | 310 | 4.99e-38 | 144 |
| MS.gene40674.t1 | MTR_4g075030 | 25.886 | 367 | 210 | 13 | 19 | 356 | 7 | 340 | 1.70e-30 | 123 |
| MS.gene40674.t1 | MTR_3g014030 | 28.829 | 222 | 138 | 9 | 100 | 315 | 1502 | 1709 | 7.95e-14 | 75.5 |
| MS.gene40674.t1 | MTR_1g037750 | 28.829 | 222 | 138 | 9 | 100 | 315 | 205 | 412 | 8.24e-14 | 74.3 |
| MS.gene40674.t1 | MTR_5g029700 | 25.463 | 216 | 128 | 7 | 126 | 318 | 322 | 527 | 1.71e-13 | 73.9 |
| MS.gene40674.t1 | MTR_3g086770 | 30.769 | 195 | 123 | 7 | 126 | 315 | 1510 | 1697 | 8.83e-12 | 68.9 |
| MS.gene40674.t1 | MTR_4g063815 | 27.706 | 231 | 149 | 9 | 111 | 330 | 35 | 258 | 9.82e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40674.t1 | AT4G34370 | 61.951 | 615 | 197 | 11 | 3 | 599 | 2 | 597 | 0.0 | 774 |
| MS.gene40674.t1 | AT2G16090 | 61.639 | 610 | 204 | 10 | 1 | 598 | 1 | 592 | 0.0 | 763 |
| MS.gene40674.t1 | AT2G16090 | 61.639 | 610 | 198 | 11 | 1 | 598 | 1 | 586 | 0.0 | 758 |
| MS.gene40674.t1 | AT2G16090 | 66.171 | 538 | 164 | 8 | 1 | 533 | 1 | 525 | 0.0 | 736 |
| MS.gene40674.t1 | AT2G16090 | 63.603 | 544 | 175 | 7 | 66 | 598 | 1 | 532 | 0.0 | 714 |
| MS.gene40674.t1 | AT2G16090 | 69.068 | 472 | 135 | 5 | 66 | 533 | 1 | 465 | 0.0 | 686 |
| MS.gene40674.t1 | AT3G27710 | 60.118 | 509 | 189 | 8 | 29 | 533 | 26 | 524 | 0.0 | 632 |
| MS.gene40674.t1 | AT4G34370 | 65.843 | 445 | 121 | 9 | 171 | 599 | 1 | 430 | 0.0 | 592 |
| MS.gene40674.t1 | AT3G27720 | 63.743 | 342 | 118 | 4 | 194 | 533 | 147 | 484 | 1.75e-160 | 468 |
| MS.gene40674.t1 | AT2G31510 | 29.468 | 526 | 328 | 13 | 2 | 509 | 18 | 518 | 7.25e-66 | 225 |
| MS.gene40674.t1 | AT2G31510 | 30.675 | 489 | 301 | 12 | 2 | 477 | 18 | 481 | 4.41e-64 | 219 |
| MS.gene40674.t1 | AT2G31510 | 29.764 | 467 | 289 | 11 | 60 | 509 | 2 | 446 | 7.78e-64 | 218 |
| MS.gene40674.t1 | AT1G05890 | 29.457 | 516 | 317 | 14 | 14 | 509 | 23 | 511 | 6.14e-63 | 217 |
| MS.gene40674.t1 | AT2G31770 | 27.184 | 515 | 335 | 15 | 14 | 509 | 3 | 496 | 2.13e-62 | 216 |
| MS.gene40674.t1 | AT1G05890 | 29.167 | 480 | 297 | 11 | 48 | 509 | 99 | 553 | 6.72e-61 | 213 |
| MS.gene40674.t1 | AT2G31760 | 28.846 | 468 | 301 | 14 | 48 | 509 | 45 | 486 | 7.73e-59 | 205 |
| MS.gene40674.t1 | AT2G31780 | 31.415 | 417 | 253 | 14 | 24 | 430 | 42 | 435 | 8.73e-59 | 203 |
| MS.gene40674.t1 | AT1G65430 | 28.442 | 552 | 339 | 16 | 2 | 526 | 4 | 526 | 1.76e-58 | 206 |
| MS.gene40674.t1 | AT5G08730 | 26.233 | 446 | 284 | 16 | 48 | 481 | 10 | 422 | 3.13e-31 | 127 |
| MS.gene40674.t1 | AT1G05880 | 22.360 | 483 | 327 | 13 | 46 | 514 | 39 | 487 | 4.46e-27 | 115 |
| MS.gene40674.t1 | AT1G05880 | 23.235 | 439 | 294 | 12 | 46 | 475 | 39 | 443 | 6.55e-26 | 111 |
| MS.gene40674.t1 | AT1G05880 | 22.107 | 484 | 320 | 13 | 46 | 514 | 39 | 480 | 2.98e-25 | 110 |
| MS.gene40674.t1 | AT5G63750 | 23.922 | 510 | 306 | 18 | 48 | 501 | 11 | 494 | 1.63e-19 | 92.8 |
| MS.gene40674.t1 | AT5G63730 | 27.018 | 285 | 183 | 10 | 48 | 315 | 11 | 287 | 3.58e-17 | 85.1 |
| MS.gene40674.t1 | AT5G63760 | 31.416 | 226 | 119 | 13 | 120 | 315 | 20 | 239 | 5.14e-16 | 81.3 |
| MS.gene40674.t1 | AT5G63760 | 31.416 | 226 | 119 | 13 | 120 | 315 | 20 | 239 | 5.14e-16 | 81.3 |
| MS.gene40674.t1 | AT5G63760 | 31.416 | 226 | 119 | 13 | 120 | 315 | 20 | 239 | 5.14e-16 | 81.3 |
| MS.gene40674.t1 | AT3G14250 | 29.864 | 221 | 128 | 11 | 125 | 333 | 94 | 299 | 4.70e-15 | 76.6 |
| MS.gene40674.t1 | AT1G32340 | 27.197 | 239 | 140 | 8 | 109 | 323 | 361 | 589 | 5.09e-15 | 79.0 |
| MS.gene40674.t1 | AT5G10370 | 27.136 | 199 | 136 | 6 | 120 | 315 | 1558 | 1750 | 8.67e-14 | 75.5 |
| MS.gene40674.t1 | AT2G26135 | 30.882 | 204 | 123 | 9 | 126 | 320 | 153 | 347 | 7.10e-13 | 71.2 |
| MS.gene40674.t1 | AT4G01020 | 26.667 | 195 | 130 | 7 | 126 | 315 | 1561 | 1747 | 8.59e-13 | 72.4 |
| MS.gene40674.t1 | AT5G63760 | 34.586 | 133 | 70 | 7 | 199 | 315 | 2 | 133 | 5.66e-12 | 67.8 |
| MS.gene40674.t1 | AT2G26130 | 30.000 | 210 | 118 | 10 | 126 | 320 | 159 | 354 | 7.80e-12 | 67.8 |
Find 105 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTTTACTTTCAAGCTTAA+AGG | 0.141595 | 4.1:-33456457 | None:intergenic |
| TTTGAAGTTTATGTAGAAAA+AGG | 0.183191 | 4.1:+33454982 | MS.gene40674:CDS |
| CATAAGTTTAGCATATTTAA+AGG | 0.183354 | 4.1:-33456775 | None:intergenic |
| GTGCATCGACAATGATTTAT+TGG | 0.189539 | 4.1:+33456945 | MS.gene40674:CDS |
| TCTATGCCCTTTGATTTATA+TGG | 0.230617 | 4.1:-33457003 | None:intergenic |
| CTTTAAATATGCTAAACTTA+TGG | 0.276659 | 4.1:+33456776 | MS.gene40674:CDS |
| TCATACTTCTCTGCCATATC+AGG | 0.290091 | 4.1:-33455675 | None:intergenic |
| ATGAATCAGAAACTGTTAAT+TGG | 0.291470 | 4.1:+33455913 | MS.gene40674:CDS |
| GTATTTGCGGCCAAGCATTT+TGG | 0.310007 | 4.1:+33456012 | MS.gene40674:CDS |
| GATTATAGCTGGGTAAATAA+TGG | 0.340008 | 4.1:+33456552 | MS.gene40674:CDS |
| CGTGTTTGATGTGGGAGCTC+TGG | 0.345421 | 4.1:+33455874 | MS.gene40674:CDS |
| CTTCAGAGCTTCCAGTTTGT+TGG | 0.350879 | 4.1:+33457031 | MS.gene40674:CDS |
| ACAAGGGAAGATTTCTATTA+CGG | 0.368765 | 4.1:+33456491 | MS.gene40674:CDS |
| GCTTTATTGCTCCAACAAAC+TGG | 0.371482 | 4.1:-33457042 | None:intergenic |
| CTCCCACATCAAACACGAAC+AGG | 0.384521 | 4.1:-33455868 | None:intergenic |
| TCTCTTATTGTCTTCAATGT+AGG | 0.390159 | 4.1:-33455715 | None:intergenic |
| TAATGCTTATTTATCATCGT+TGG | 0.400236 | 4.1:+33454944 | MS.gene40674:CDS |
| GGATCAGCAGCAGCAGTTAG+AGG | 0.409897 | 4.1:+33456707 | MS.gene40674:CDS |
| CTGAACTTAATGATTATAGC+TGG | 0.410492 | 4.1:+33456541 | MS.gene40674:CDS |
| TTCTATTGCTCCCGCTGCTC+AGG | 0.411819 | 4.1:+33453986 | MS.gene40674:CDS |
| GGGAATGCAATTCGTGTTGC+AGG | 0.413068 | 4.1:+33455768 | MS.gene40674:CDS |
| AAGACAATAAGAGAGTTAAA+TGG | 0.413854 | 4.1:+33455724 | MS.gene40674:CDS |
| TGGTAGAAAGCACCCTGATA+TGG | 0.419498 | 4.1:+33455662 | MS.gene40674:CDS |
| ATTCTTGTTGCTTCATCACT+AGG | 0.422785 | 4.1:-33455111 | None:intergenic |
| GCATTTATGTTTGCTCAGGC+TGG | 0.428355 | 4.1:+33455009 | MS.gene40674:CDS |
| AATGCTTATTTATCATCGTT+GGG | 0.432983 | 4.1:+33454945 | MS.gene40674:CDS |
| TTCCCACAATGTGGCGTGCT+CGG | 0.435694 | 4.1:-33455750 | None:intergenic |
| CGGTTTGTGGCACTTTGGAC+AGG | 0.440450 | 4.1:-33455955 | None:intergenic |
| TTCTTCTTCGACGTCTTGAT+CGG | 0.440913 | 4.1:-33453910 | None:intergenic |
| CTACTGGCCGTGATCATACT+TGG | 0.451535 | 4.1:+33456313 | MS.gene40674:CDS |
| GAAGGCATTTATGTTTGCTC+AGG | 0.464709 | 4.1:+33455005 | MS.gene40674:CDS |
| TGGTTGTGTGGTGGAGCTAC+TGG | 0.468440 | 4.1:+33456297 | MS.gene40674:CDS |
| ATGCTAAACTTATGGAGATA+AGG | 0.473847 | 4.1:+33456784 | MS.gene40674:CDS |
| TATTTATCATCGTTGGGATG+TGG | 0.476215 | 4.1:+33454951 | MS.gene40674:CDS |
| GGTACATGCATTATCATAAC+CGG | 0.485862 | 4.1:+33456415 | MS.gene40674:CDS |
| ACAAATGTCAGAAGCTGAAA+GGG | 0.487072 | 4.1:+33456662 | MS.gene40674:CDS |
| AGAAATGTTACTGAGTGAAA+AGG | 0.489380 | 4.1:+33457706 | MS.gene40674:intron |
| GGGCAAAGAGGGATCTCTAT+AGG | 0.491647 | 4.1:+33456394 | MS.gene40674:CDS |
| AATGAAACAGAACTTATTTG+AGG | 0.494812 | 4.1:+33456686 | MS.gene40674:CDS |
| TAGTGATGAAGCAACAAGAA+TGG | 0.496144 | 4.1:+33455113 | MS.gene40674:CDS |
| GAGCAATAAAGCTGACAATA+CGG | 0.496778 | 4.1:+33457053 | MS.gene40674:CDS |
| CGTAAGCGTGCCAGAGAAGA+AGG | 0.497557 | 4.1:+33457803 | MS.gene40674:CDS |
| GTCCGAGCACGCCACATTGT+GGG | 0.497626 | 4.1:+33455748 | MS.gene40674:CDS |
| CATACTTGGTCAAGTATAGC+TGG | 0.500185 | 4.1:+33456327 | MS.gene40674:CDS |
| CTGTCCAAAGTGCCACAAAC+CGG | 0.503790 | 4.1:+33455956 | MS.gene40674:CDS |
| TCAAGAGAAATCAGCTGAGC+GGG | 0.505415 | 4.1:+33456374 | MS.gene40674:CDS |
| AATTTGGTTAGCTGTATTTG+CGG | 0.507682 | 4.1:+33455999 | MS.gene40674:CDS |
| GGAGGACTTGCGCAGAGTGA+TGG | 0.509123 | 4.1:+33454888 | MS.gene40674:CDS |
| GTGTTTGATGTGGGAGCTCT+GGG | 0.510947 | 4.1:+33455875 | MS.gene40674:CDS |
| ATCAGCTGAGCGGGCAAAGA+GGG | 0.511484 | 4.1:+33456383 | MS.gene40674:CDS |
| ATATCATGACTCTGGCTCGC+TGG | 0.511966 | 4.1:+33455047 | MS.gene40674:CDS |
| TCCACCGGTTTGTGGCACTT+TGG | 0.517904 | 4.1:-33455960 | None:intergenic |
| TATAGCACCATATAAATCAA+AGG | 0.523492 | 4.1:+33456996 | MS.gene40674:CDS |
| GCTGTCGTAAGAACTTTACT+TGG | 0.526473 | 4.1:+33455642 | MS.gene40674:CDS |
| AACAAATGTCAGAAGCTGAA+AGG | 0.528651 | 4.1:+33456661 | MS.gene40674:CDS |
| ATAGCACCATATAAATCAAA+GGG | 0.529766 | 4.1:+33456997 | MS.gene40674:CDS |
| TTTCTGTCTACAACTTCAGC+TGG | 0.532183 | 4.1:-33457848 | None:intergenic |
| TTATTGGATTCTATTAATCT+CGG | 0.532615 | 4.1:+33456961 | MS.gene40674:CDS |
| AAGGAAGGAACCTGAGCAGC+GGG | 0.534714 | 4.1:-33453996 | None:intergenic |
| CTGTACAGTTGGTTGTGTGG+TGG | 0.539491 | 4.1:+33456288 | MS.gene40674:intron |
| AGCAATAAAGCTGACAATAC+GGG | 0.541090 | 4.1:+33457054 | MS.gene40674:CDS |
| GGAATACTCACCAAAATGCT+TGG | 0.544949 | 4.1:-33456022 | None:intergenic |
| CCCCTGTTCGTGTTTGATGT+GGG | 0.548928 | 4.1:+33455866 | MS.gene40674:CDS |
| GACACAGCATTTCTTTGTCA+AGG | 0.556593 | 4.1:+33455554 | MS.gene40674:CDS |
| AGTCTGTGTGAGCTTTATAC+CGG | 0.559653 | 4.1:-33456434 | None:intergenic |
| TGTCCGAGCACGCCACATTG+TGG | 0.561018 | 4.1:+33455747 | MS.gene40674:CDS |
| GGAATCACTGATAGTTGCAC+AGG | 0.563375 | 4.1:+33454769 | MS.gene40674:CDS |
| CATACTTCTCTGCCATATCA+GGG | 0.565467 | 4.1:-33455674 | None:intergenic |
| TGAACTTAATGATTATAGCT+GGG | 0.565641 | 4.1:+33456542 | MS.gene40674:CDS |
| AAGCTCTGCTGTTACACCTA+CGG | 0.573437 | 4.1:-33457750 | None:intergenic |
| TGCTCAGGCTGGTGTTAGTG+TGG | 0.573538 | 4.1:+33455020 | MS.gene40674:CDS |
| TGTATATATGCTGCAACCGT+AGG | 0.574627 | 4.1:+33457734 | MS.gene40674:CDS |
| GCATATTTAAAGGTGTCGAA+AGG | 0.577111 | 4.1:-33456765 | None:intergenic |
| AAACTGAAAGATATCATACA+AGG | 0.580876 | 4.1:+33456474 | MS.gene40674:CDS |
| TTTCTGTACAGTTGGTTGTG+TGG | 0.585716 | 4.1:+33456285 | MS.gene40674:intron |
| TAAATCAAAGGGCATAGAGA+AGG | 0.587058 | 4.1:+33457008 | MS.gene40674:CDS |
| AAGTAAACGCATCAGATGCA+TGG | 0.588761 | 4.1:+33455590 | MS.gene40674:CDS |
| GTGGATGAATATCATGACTC+TGG | 0.592583 | 4.1:+33455039 | MS.gene40674:CDS |
| CTTAATCAGTCAGAAGAGAG+TGG | 0.594834 | 4.1:+33457770 | MS.gene40674:CDS |
| CAAACGCATATGAATATGAA+AGG | 0.599466 | 4.1:-33456605 | None:intergenic |
| ATCAAGAGAAATCAGCTGAG+CGG | 0.602973 | 4.1:+33456373 | MS.gene40674:CDS |
| TTCTTTGTCAAGGTAAACGA+GGG | 0.608990 | 4.1:+33455564 | MS.gene40674:CDS |
| GGAGTATTGATAATCTTCAT+CGG | 0.611843 | 4.1:-33453889 | None:intergenic |
| TCCCACATCAAACACGAACA+GGG | 0.614215 | 4.1:-33455867 | None:intergenic |
| GCAGCGGGAGCAATAGAAGA+GGG | 0.626117 | 4.1:-33453981 | None:intergenic |
| TACTTGACCAAGTATGATCA+CGG | 0.628425 | 4.1:-33456320 | None:intergenic |
| AGCAGCGGGAGCAATAGAAG+AGG | 0.631344 | 4.1:-33453982 | None:intergenic |
| ATTTATATGGTGCTATACTG+TGG | 0.634097 | 4.1:-33456990 | None:intergenic |
| AGTATAGCTGGTCACAGCTG+TGG | 0.637100 | 4.1:+33456339 | MS.gene40674:CDS |
| TCCAAAGTGCCACAAACCGG+TGG | 0.641185 | 4.1:+33455959 | MS.gene40674:CDS |
| AATCAGCTGAGCGGGCAAAG+AGG | 0.650192 | 4.1:+33456382 | MS.gene40674:CDS |
| CCCACATCAAACACGAACAG+GGG | 0.653511 | 4.1:-33455866 | None:intergenic |
| AGTAATGTGTGAAATCTGCA+TGG | 0.653554 | 4.1:+33455080 | MS.gene40674:CDS |
| GAAGGAAGGAACCTGAGCAG+CGG | 0.659810 | 4.1:-33453997 | None:intergenic |
| TTTCTTTGTCAAGGTAAACG+AGG | 0.661438 | 4.1:+33455563 | MS.gene40674:CDS |
| CGAATTGCATTCCCACAATG+TGG | 0.661456 | 4.1:-33455759 | None:intergenic |
| ACACTTGCAGGTGATTACGA+AGG | 0.665460 | 4.1:+33454748 | MS.gene40674:intron |
| CCACATCAAACACGAACAGG+GGG | 0.666654 | 4.1:-33455865 | None:intergenic |
| AACTGAAAGATATCATACAA+GGG | 0.667662 | 4.1:+33456475 | MS.gene40674:CDS |
| GTATTGATAATCTTCATCGG+TGG | 0.686161 | 4.1:-33453886 | None:intergenic |
| GTCGAAGAAGAAGATTCCGT+CGG | 0.701998 | 4.1:+33453921 | MS.gene40674:CDS |
| AAGCGTGCCAGAGAAGAAGG+TGG | 0.717667 | 4.1:+33457806 | MS.gene40674:CDS |
| TGTGAGGTAGAATGTTCATG+TGG | 0.730408 | 4.1:+33455804 | MS.gene40674:CDS |
| AGGTGATGATGACTTGTGTG+AGG | 0.743333 | 4.1:+33455788 | MS.gene40674:CDS |
| GAAGCAACAAGAATGGACTG+TGG | 0.810129 | 4.1:+33455120 | MS.gene40674:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAACATAAATTATTTCA+TGG | - | chr4.1:33456098-33456117 | None:intergenic | 15.0% |
| !! | AATAAAAAAAAGAAACTAAC+AGG | - | chr4.1:33455163-33455182 | None:intergenic | 15.0% |
| !! | ATGAAATAATTTATGTTTCT+TGG | + | chr4.1:33456097-33456116 | MS.gene40674:intron | 15.0% |
| !! | TCATCGAATAAAAAAAAAAA+AGG | - | chr4.1:33454045-33454064 | None:intergenic | 15.0% |
| !!! | AAGTAATGGAAAATTAATAA+TGG | - | chr4.1:33457340-33457359 | None:intergenic | 15.0% |
| !!! | TAATAAAACCATTGTTATTT+GGG | + | chr4.1:33457441-33457460 | MS.gene40674:intron | 15.0% |
| !!! | TCTATGGTTATATATTTTAT+TGG | + | chr4.1:33454446-33454465 | MS.gene40674:intron | 15.0% |
| !!! | TTAATAAAACCATTGTTATT+TGG | + | chr4.1:33457440-33457459 | MS.gene40674:intron | 15.0% |
| !!! | TTATTGTATGATTTTATTGA+AGG | + | chr4.1:33454550-33454569 | MS.gene40674:intron | 15.0% |
| !! | AAAATGGGAAAAATTATTAC+TGG | - | chr4.1:33456268-33456287 | None:intergenic | 20.0% |
| !! | ATATGAATGAATATATTGCA+TGG | + | chr4.1:33457498-33457517 | MS.gene40674:intron | 20.0% |
| !! | CATAAGTTTAGCATATTTAA+AGG | - | chr4.1:33456778-33456797 | None:intergenic | 20.0% |
| !! | CTTTAAATATGCTAAACTTA+TGG | + | chr4.1:33456776-33456795 | MS.gene40674:CDS | 20.0% |
| !! | GCTCAAGATATAAATTAATT+TGG | - | chr4.1:33457616-33457635 | None:intergenic | 20.0% |
| !! | TAGTTTAGCTATTAAATTGA+CGG | - | chr4.1:33454242-33454261 | None:intergenic | 20.0% |
| !! | TGGAAAAATTACATTAACTT+TGG | + | chr4.1:33455511-33455530 | MS.gene40674:intron | 20.0% |
| !! | TTATTGGATTCTATTAATCT+CGG | + | chr4.1:33456961-33456980 | MS.gene40674:CDS | 20.0% |
| !! | TTGAAGTTTATGTAGAAAAA+GGG | + | chr4.1:33454983-33455002 | MS.gene40674:CDS | 20.0% |
| !! | TTGTTGTATGTATCATAATA+TGG | + | chr4.1:33456196-33456215 | MS.gene40674:intron | 20.0% |
| !! | TTTCTTCTTCAAAATTTCAT+CGG | + | chr4.1:33455204-33455223 | MS.gene40674:intron | 20.0% |
| !!! | ACAATGGTTTTATTAAAATC+AGG | - | chr4.1:33457436-33457455 | None:intergenic | 20.0% |
| !!! | ATTTTGAAGAAGAAAAAACA+AGG | - | chr4.1:33455199-33455218 | None:intergenic | 20.0% |
| !!! | CAATGGTTTTATTAAAATCA+GGG | - | chr4.1:33457435-33457454 | None:intergenic | 20.0% |
| !!! | TTGATTAAAATTTGGAACTT+TGG | + | chr4.1:33454145-33454164 | MS.gene40674:intron | 20.0% |
| !!! | TTTGAAGTTTATGTAGAAAA+AGG | + | chr4.1:33454982-33455001 | MS.gene40674:CDS | 20.0% |
| !!! | TTTTGAAGAAGAAAAAACAA+GGG | - | chr4.1:33455198-33455217 | None:intergenic | 20.0% |
| !!! | TTTTGTGTTTATTTAGTCTA+TGG | + | chr4.1:33454430-33454449 | MS.gene40674:intron | 20.0% |
| !!! | TTTTTTTTTTGTTGAGTTTC+TGG | + | chr4.1:33454184-33454203 | MS.gene40674:intron | 20.0% |
| ! | AAACTGAAAGATATCATACA+AGG | + | chr4.1:33456474-33456493 | MS.gene40674:CDS | 25.0% |
| ! | AACTGAAAGATATCATACAA+GGG | + | chr4.1:33456475-33456494 | MS.gene40674:CDS | 25.0% |
| ! | AAGACAATAAGAGAGTTAAA+TGG | + | chr4.1:33455724-33455743 | MS.gene40674:CDS | 25.0% |
| ! | AATGAAAATGAAAAGGTTGA+AGG | - | chr4.1:33454018-33454037 | None:intergenic | 25.0% |
| ! | AATGAAACAGAACTTATTTG+AGG | + | chr4.1:33456686-33456705 | MS.gene40674:CDS | 25.0% |
| ! | AATGCTTATTTATCATCGTT+GGG | + | chr4.1:33454945-33454964 | MS.gene40674:CDS | 25.0% |
| ! | AGGTTTGAATGAAAATGAAA+AGG | - | chr4.1:33454025-33454044 | None:intergenic | 25.0% |
| ! | ATAGCACCATATAAATCAAA+GGG | + | chr4.1:33456997-33457016 | MS.gene40674:CDS | 25.0% |
| ! | ATGAATCAGAAACTGTTAAT+TGG | + | chr4.1:33455913-33455932 | MS.gene40674:CDS | 25.0% |
| ! | ATTCTTGCTCAATTTATTGA+AGG | + | chr4.1:33454384-33454403 | MS.gene40674:intron | 25.0% |
| ! | TAAATGTCTATTGTTGGATT+TGG | + | chr4.1:33457077-33457096 | MS.gene40674:intron | 25.0% |
| ! | TAATATTAACCACTAGAAGT+TGG | - | chr4.1:33454643-33454662 | None:intergenic | 25.0% |
| ! | TAATGCTTATTTATCATCGT+TGG | + | chr4.1:33454944-33454963 | MS.gene40674:CDS | 25.0% |
| ! | TATAGCACCATATAAATCAA+AGG | + | chr4.1:33456996-33457015 | MS.gene40674:CDS | 25.0% |
| ! | TATATGCACAATACAAGTAA+TGG | - | chr4.1:33457354-33457373 | None:intergenic | 25.0% |
| ! | TATGTATCATAATATGGATC+AGG | + | chr4.1:33456202-33456221 | MS.gene40674:intron | 25.0% |
| ! | TGAACTTAATGATTATAGCT+GGG | + | chr4.1:33456542-33456561 | MS.gene40674:CDS | 25.0% |
| ! | TGAATTCTTATATTGAATGC+AGG | + | chr4.1:33456917-33456936 | MS.gene40674:intron | 25.0% |
| ! | TGAGAATATATAATGCAAGA+AGG | - | chr4.1:33456046-33456065 | None:intergenic | 25.0% |
| ! | TTTCATGATTGAATTGTGTA+TGG | + | chr4.1:33457475-33457494 | MS.gene40674:intron | 25.0% |
| !! | TTGAAATGTTTCTGTTATCA+TGG | + | chr4.1:33454582-33454601 | MS.gene40674:intron | 25.0% |
| !!! | TGAAAAACTCTCTAAGATTT+TGG | + | chr4.1:33456737-33456756 | MS.gene40674:CDS | 25.0% |
| AAAAATGTCAGTGCATAGAA+AGG | - | chr4.1:33454711-33454730 | None:intergenic | 30.0% | |
| AAAATGAAAAGGTTGAAGGA+AGG | - | chr4.1:33454014-33454033 | None:intergenic | 30.0% | |
| AAATCCATCCCAAATAACAA+TGG | - | chr4.1:33457452-33457471 | None:intergenic | 30.0% | |
| AATAAATAAGCCATGTCATC+CGG | - | chr4.1:33455438-33455457 | None:intergenic | 30.0% | |
| ACAAGGGAAGATTTCTATTA+CGG | + | chr4.1:33456491-33456510 | MS.gene40674:CDS | 30.0% | |
| ACCTGTTATCAGTAACTAAT+TGG | + | chr4.1:33457191-33457210 | MS.gene40674:intron | 30.0% | |
| ACTTGTATTGTGCATATATG+TGG | + | chr4.1:33457356-33457375 | MS.gene40674:intron | 30.0% | |
| AGAAATGTTACTGAGTGAAA+AGG | + | chr4.1:33457706-33457725 | MS.gene40674:intron | 30.0% | |
| AGAGGAAACAACAAAATCAA+TGG | + | chr4.1:33455289-33455308 | MS.gene40674:intron | 30.0% | |
| AGTTTATGTAGAAAAAGGGA+AGG | + | chr4.1:33454987-33455006 | MS.gene40674:CDS | 30.0% | |
| ATGCTAAACTTATGGAGATA+AGG | + | chr4.1:33456784-33456803 | MS.gene40674:CDS | 30.0% | |
| ATTACGGAAGAAAAACATTC+TGG | + | chr4.1:33456507-33456526 | MS.gene40674:CDS | 30.0% | |
| CAAACGCATATGAATATGAA+AGG | - | chr4.1:33456608-33456627 | None:intergenic | 30.0% | |
| CAGATTCATATAACCTATCA+AGG | + | chr4.1:33455398-33455417 | MS.gene40674:intron | 30.0% | |
| CAGTAACTAATTGGGTTATA+TGG | + | chr4.1:33457200-33457219 | MS.gene40674:intron | 30.0% | |
| CAGTTTACTTTCAAGCTTAA+AGG | - | chr4.1:33456460-33456479 | None:intergenic | 30.0% | |
| CCCTAAGTATATGAAATTGA+CGG | + | chr4.1:33454283-33454302 | MS.gene40674:intron | 30.0% | |
| CCGTCAATTTCATATACTTA+GGG | - | chr4.1:33454286-33454305 | None:intergenic | 30.0% | |
| CCTAAGTATATGAAATTGAC+GGG | + | chr4.1:33454284-33454303 | MS.gene40674:intron | 30.0% | |
| CCTGTTATCAGTAACTAATT+GGG | + | chr4.1:33457192-33457211 | MS.gene40674:intron | 30.0% | |
| CTAAGTATATGAAATTGACG+GGG | + | chr4.1:33454285-33454304 | MS.gene40674:intron | 30.0% | |
| CTGAACTTAATGATTATAGC+TGG | + | chr4.1:33456541-33456560 | MS.gene40674:CDS | 30.0% | |
| CTTGTATTGTGCATATATGT+GGG | + | chr4.1:33457357-33457376 | MS.gene40674:intron | 30.0% | |
| GAAAAATGGTGGTTGTAATT+TGG | + | chr4.1:33455983-33456002 | MS.gene40674:CDS | 30.0% | |
| GATTATAGCTGGGTAAATAA+TGG | + | chr4.1:33456552-33456571 | MS.gene40674:CDS | 30.0% | |
| TAACGCTTAAAAACCTTGAT+AGG | - | chr4.1:33455414-33455433 | None:intergenic | 30.0% | |
| TATGTGAAGTTGAATCGTTT+GGG | + | chr4.1:33454684-33454703 | MS.gene40674:intron | 30.0% | |
| TATGTGCATTCATATACAGA+AGG | + | chr4.1:33454867-33454886 | MS.gene40674:intron | 30.0% | |
| TCTCTTATTGTCTTCAATGT+AGG | - | chr4.1:33455718-33455737 | None:intergenic | 30.0% | |
| TGGTTTAGAGACTAAATTGA+TGG | + | chr4.1:33454358-33454377 | MS.gene40674:intron | 30.0% | |
| TTAAAATCAGGGTGAAATCA+AGG | - | chr4.1:33457424-33457443 | None:intergenic | 30.0% | |
| TTATGTGAAGTTGAATCGTT+TGG | + | chr4.1:33454683-33454702 | MS.gene40674:intron | 30.0% | |
| TTCTGTATATGAATGCACAT+AGG | - | chr4.1:33454868-33454887 | None:intergenic | 30.0% | |
| ! | AATTTGGTTAGCTGTATTTG+CGG | + | chr4.1:33455999-33456018 | MS.gene40674:CDS | 30.0% |
| ! | AATTTTTCCAGTCTTTCATG+AGG | - | chr4.1:33455501-33455520 | None:intergenic | 30.0% |
| ! | ATTTTTCCAGTCTTTCATGA+GGG | - | chr4.1:33455500-33455519 | None:intergenic | 30.0% |
| ! | TCTATGCCCTTTGATTTATA+TGG | - | chr4.1:33457006-33457025 | None:intergenic | 30.0% |
| ! | TTTCATGAGGGTGTAAAAAA+AGG | - | chr4.1:33455488-33455507 | None:intergenic | 30.0% |
| ! | TTTTCGTGGTTTATAGTCTA+TGG | + | chr4.1:33454613-33454632 | MS.gene40674:intron | 30.0% |
| !! | AAAACCATTGTTATTTGGGA+TGG | + | chr4.1:33457445-33457464 | MS.gene40674:intron | 30.0% |
| !! | ATTTATATGGTGCTATACTG+TGG | - | chr4.1:33456993-33457012 | None:intergenic | 30.0% |
| !! | GGAGTATTGATAATCTTCAT+CGG | - | chr4.1:33453892-33453911 | None:intergenic | 30.0% |
| !! | TTGGAACTTTGGAATTGATT+TGG | + | chr4.1:33454156-33454175 | MS.gene40674:intron | 30.0% |
| !! | TTTTCTTCAGTTTGACTTTG+TGG | + | chr4.1:33457677-33457696 | MS.gene40674:intron | 30.0% |
| !!! | AAAACTCTCTAAGATTTTGG+AGG | + | chr4.1:33456740-33456759 | MS.gene40674:CDS | 30.0% |
| AACAAATGTCAGAAGCTGAA+AGG | + | chr4.1:33456661-33456680 | MS.gene40674:CDS | 35.0% | |
| AATGGACCGTACATAAATAG+TGG | + | chr4.1:33455307-33455326 | MS.gene40674:intron | 35.0% | |
| ACAAATGTCAGAAGCTGAAA+GGG | + | chr4.1:33456662-33456681 | MS.gene40674:CDS | 35.0% | |
| ACAACCAACTGTACAGAAAA+TGG | - | chr4.1:33456284-33456303 | None:intergenic | 35.0% | |
| ACTAAGTGAAGTCATCTACA+TGG | - | chr4.1:33454503-33454522 | None:intergenic | 35.0% | |
| AGCAATAAAGCTGACAATAC+GGG | + | chr4.1:33457054-33457073 | MS.gene40674:CDS | 35.0% | |
| AGCATAAAGAGAGAAGCAAA+GGG | - | chr4.1:33457141-33457160 | None:intergenic | 35.0% | |
| AGTAATGTGTGAAATCTGCA+TGG | + | chr4.1:33455080-33455099 | MS.gene40674:CDS | 35.0% | |
| ATGTAGATGACTTCACTTAG+TGG | + | chr4.1:33454502-33454521 | MS.gene40674:intron | 35.0% | |
| CAACCAACTGTACAGAAAAT+GGG | - | chr4.1:33456283-33456302 | None:intergenic | 35.0% | |
| CCCAATTAGTTACTGATAAC+AGG | - | chr4.1:33457195-33457214 | None:intergenic | 35.0% | |
| CCCGTCAATTTCATATACTT+AGG | - | chr4.1:33454287-33454306 | None:intergenic | 35.0% | |
| CTAAATTGAAGTGAGAGTGA+TGG | + | chr4.1:33454338-33454357 | MS.gene40674:intron | 35.0% | |
| GAGCAATAAAGCTGACAATA+CGG | + | chr4.1:33457053-33457072 | MS.gene40674:CDS | 35.0% | |
| GGTACATGCATTATCATAAC+CGG | + | chr4.1:33456415-33456434 | MS.gene40674:CDS | 35.0% | |
| GTTGTTGTAACATGAGAAAG+TGG | + | chr4.1:33457588-33457607 | MS.gene40674:intron | 35.0% | |
| TACGGGTAAATGTCTATTGT+TGG | + | chr4.1:33457071-33457090 | MS.gene40674:intron | 35.0% | |
| TACTTGACCAAGTATGATCA+CGG | - | chr4.1:33456323-33456342 | None:intergenic | 35.0% | |
| TAGTGATGAAGCAACAAGAA+TGG | + | chr4.1:33455113-33455132 | MS.gene40674:CDS | 35.0% | |
| TATTTATCATCGTTGGGATG+TGG | + | chr4.1:33454951-33454970 | MS.gene40674:CDS | 35.0% | |
| TGTAGATGACTTCACTTAGT+GGG | + | chr4.1:33454503-33454522 | MS.gene40674:intron | 35.0% | |
| TGTGTCCAACCTGTAAAAAT+AGG | - | chr4.1:33455540-33455559 | None:intergenic | 35.0% | |
| TTCTTTGTCAAGGTAAACGA+GGG | + | chr4.1:33455564-33455583 | MS.gene40674:CDS | 35.0% | |
| TTTCTTTGTCAAGGTAAACG+AGG | + | chr4.1:33455563-33455582 | MS.gene40674:CDS | 35.0% | |
| ! | ATTCTTGTTGCTTCATCACT+AGG | - | chr4.1:33455114-33455133 | None:intergenic | 35.0% |
| ! | GCGTTTGCGTTTTATATGTT+TGG | + | chr4.1:33456621-33456640 | MS.gene40674:CDS | 35.0% |
| ! | GTATTGATAATCTTCATCGG+TGG | - | chr4.1:33453889-33453908 | None:intergenic | 35.0% |
| ! | GTGCATCGACAATGATTTAT+TGG | + | chr4.1:33456945-33456964 | MS.gene40674:CDS | 35.0% |
| ! | TAAATCAAAGGGCATAGAGA+AGG | + | chr4.1:33457008-33457027 | MS.gene40674:CDS | 35.0% |
| ! | TAAGTGTTGTGCTTTAGATG+AGG | + | chr4.1:33456858-33456877 | MS.gene40674:intron | 35.0% |
| ! | TCATGGAAAAGTGTAATGAC+CGG | - | chr4.1:33456081-33456100 | None:intergenic | 35.0% |
| ! | TTTCCCATTTTCTGTACAGT+TGG | + | chr4.1:33456277-33456296 | MS.gene40674:intron | 35.0% |
| !! | GCATATTTAAAGGTGTCGAA+AGG | - | chr4.1:33456768-33456787 | None:intergenic | 35.0% |
| !! | TTGTTCTGTATCGTCGTTTT+TGG | + | chr4.1:33454208-33454227 | MS.gene40674:intron | 35.0% |
| !!! | TGTTCTGTATCGTCGTTTTT+GGG | + | chr4.1:33454209-33454228 | MS.gene40674:intron | 35.0% |
| AAAAAAGCCACCTTCTTCTC+TGG | - | chr4.1:33457816-33457835 | None:intergenic | 40.0% | |
| AAGTAAACGCATCAGATGCA+TGG | + | chr4.1:33455590-33455609 | MS.gene40674:CDS | 40.0% | |
| AGAAGCAAAGGGATAATACG+AGG | - | chr4.1:33457130-33457149 | None:intergenic | 40.0% | |
| ATCAAGAGAAATCAGCTGAG+CGG | + | chr4.1:33456373-33456392 | MS.gene40674:CDS | 40.0% | |
| ATGGCGTATTGTCATGTTAG+TGG | - | chr4.1:33455261-33455280 | None:intergenic | 40.0% | |
| CAACAACAACCAAGCCTTTA+CGG | - | chr4.1:33456170-33456189 | None:intergenic | 40.0% | |
| CAGCATAAAGAGAGAAGCAA+AGG | - | chr4.1:33457142-33457161 | None:intergenic | 40.0% | |
| CATACACTTTGTGGTCATGT+TGG | + | chr4.1:33457265-33457284 | MS.gene40674:intron | 40.0% | |
| CATACTTCTCTGCCATATCA+GGG | - | chr4.1:33455677-33455696 | None:intergenic | 40.0% | |
| CATACTTGGTCAAGTATAGC+TGG | + | chr4.1:33456327-33456346 | MS.gene40674:CDS | 40.0% | |
| CTTAATCAGTCAGAAGAGAG+TGG | + | chr4.1:33457770-33457789 | MS.gene40674:CDS | 40.0% | |
| GAAGCAAAGGGATAATACGA+GGG | - | chr4.1:33457129-33457148 | None:intergenic | 40.0% | |
| GACACAGCATTTCTTTGTCA+AGG | + | chr4.1:33455554-33455573 | MS.gene40674:CDS | 40.0% | |
| GACCCACCACTATTTATGTA+CGG | - | chr4.1:33455316-33455335 | None:intergenic | 40.0% | |
| GACCGTACATAAATAGTGGT+GGG | + | chr4.1:33455311-33455330 | MS.gene40674:intron | 40.0% | |
| GATCATAGTTGTATGGGGAT+CGG | + | chr4.1:33457381-33457400 | MS.gene40674:intron | 40.0% | |
| GCTGTCGTAAGAACTTTACT+TGG | + | chr4.1:33455642-33455661 | MS.gene40674:CDS | 40.0% | |
| GGAATACTCACCAAAATGCT+TGG | - | chr4.1:33456025-33456044 | None:intergenic | 40.0% | |
| GTCCAACCTGTAAAAATAGG+CGG | - | chr4.1:33455537-33455556 | None:intergenic | 40.0% | |
| GTCTCAACACATACACTTTG+TGG | + | chr4.1:33457256-33457275 | MS.gene40674:intron | 40.0% | |
| GTGCATTCATATACAGAAGG+AGG | + | chr4.1:33454870-33454889 | MS.gene40674:intron | 40.0% | |
| GTGGATGAATATCATGACTC+TGG | + | chr4.1:33455039-33455058 | MS.gene40674:CDS | 40.0% | |
| GTGGGAGATCATAGTTGTAT+GGG | + | chr4.1:33457375-33457394 | MS.gene40674:intron | 40.0% | |
| TATGGTGATCCAACTTCTAG+TGG | + | chr4.1:33454631-33454650 | MS.gene40674:intron | 40.0% | |
| TCATACTTCTCTGCCATATC+AGG | - | chr4.1:33455678-33455697 | None:intergenic | 40.0% | |
| TGACTTCACTTAGTGGGATA+AGG | + | chr4.1:33454509-33454528 | MS.gene40674:intron | 40.0% | |
| TGGCGTATTGTCATGTTAGT+GGG | - | chr4.1:33455260-33455279 | None:intergenic | 40.0% | |
| TGGGAGATCATAGTTGTATG+GGG | + | chr4.1:33457376-33457395 | MS.gene40674:intron | 40.0% | |
| TGTATATATGCTGCAACCGT+AGG | + | chr4.1:33457734-33457753 | MS.gene40674:CDS | 40.0% | |
| TGTGAGGTAGAATGTTCATG+TGG | + | chr4.1:33455804-33455823 | MS.gene40674:CDS | 40.0% | |
| TGTGGGAGATCATAGTTGTA+TGG | + | chr4.1:33457374-33457393 | MS.gene40674:intron | 40.0% | |
| TTCTTCTTCGACGTCTTGAT+CGG | - | chr4.1:33453913-33453932 | None:intergenic | 40.0% | |
| TTGTTTCCTCTCTCACAAGA+TGG | - | chr4.1:33455280-33455299 | None:intergenic | 40.0% | |
| TTTACACCCTCATGAAAGAC+TGG | + | chr4.1:33455491-33455510 | MS.gene40674:intron | 40.0% | |
| TTTCTGTACAGTTGGTTGTG+TGG | + | chr4.1:33456285-33456304 | MS.gene40674:intron | 40.0% | |
| TTTCTGTCTACAACTTCAGC+TGG | - | chr4.1:33457851-33457870 | None:intergenic | 40.0% | |
| TTTGATCCATGTTGCCGTAA+AGG | + | chr4.1:33456153-33456172 | MS.gene40674:intron | 40.0% | |
| ! | AGTCTGTGTGAGCTTTATAC+CGG | - | chr4.1:33456437-33456456 | None:intergenic | 40.0% |
| ! | ATTCTCATCCAACTTGTTCC+CGG | + | chr4.1:33456059-33456078 | MS.gene40674:intron | 40.0% |
| ! | CATGGAAAAGTGTAATGACC+GGG | - | chr4.1:33456080-33456099 | None:intergenic | 40.0% |
| ! | GCTTTATTGCTCCAACAAAC+TGG | - | chr4.1:33457045-33457064 | None:intergenic | 40.0% |
| ! | GTTTTCGTAGAATTCACCGA+CGG | - | chr4.1:33453940-33453959 | None:intergenic | 40.0% |
| !! | CAAGGTTTTTAAGCGTTAGC+CGG | + | chr4.1:33455416-33455435 | MS.gene40674:intron | 40.0% |
| !! | GAAGGCATTTATGTTTGCTC+AGG | + | chr4.1:33455005-33455024 | MS.gene40674:CDS | 40.0% |
| !!! | TCATGGTTGCAACTTTTTCG+TGG | + | chr4.1:33454599-33454618 | MS.gene40674:intron | 40.0% |
| !!! | TGAACTGTTTTGACACTTGC+AGG | + | chr4.1:33454736-33454755 | MS.gene40674:intron | 40.0% |
| AAACCGGTGGAGAAAAATGG+TGG | + | chr4.1:33455972-33455991 | MS.gene40674:CDS | 45.0% | |
| AAGCTCTGCTGTTACACCTA+CGG | - | chr4.1:33457753-33457772 | None:intergenic | 45.0% | |
| AATACGCCATCTTGTGAGAG+AGG | + | chr4.1:33455271-33455290 | MS.gene40674:intron | 45.0% | |
| ACACTTGCAGGTGATTACGA+AGG | + | chr4.1:33454748-33454767 | MS.gene40674:intron | 45.0% | |
| CACAAACCGGTGGAGAAAAA+TGG | + | chr4.1:33455969-33455988 | MS.gene40674:CDS | 45.0% | |
| CGAATTGCATTCCCACAATG+TGG | - | chr4.1:33455762-33455781 | None:intergenic | 45.0% | |
| CTTCAGAGCTTCCAGTTTGT+TGG | + | chr4.1:33457031-33457050 | MS.gene40674:CDS | 45.0% | |
| GCATTTATGTTTGCTCAGGC+TGG | + | chr4.1:33455009-33455028 | MS.gene40674:CDS | 45.0% | |
| GGAATCACTGATAGTTGCAC+AGG | + | chr4.1:33454769-33454788 | MS.gene40674:CDS | 45.0% | |
| GGACCGTACATAAATAGTGG+TGG | + | chr4.1:33455310-33455329 | MS.gene40674:intron | 45.0% | |
| GTCGAAGAAGAAGATTCCGT+CGG | + | chr4.1:33453921-33453940 | MS.gene40674:CDS | 45.0% | |
| TCAAGAGAAATCAGCTGAGC+GGG | + | chr4.1:33456374-33456393 | MS.gene40674:CDS | 45.0% | |
| TCACTTAGTGGGATAAGGCT+TGG | + | chr4.1:33454514-33454533 | MS.gene40674:intron | 45.0% | |
| TCCCACATCAAACACGAACA+GGG | - | chr4.1:33455870-33455889 | None:intergenic | 45.0% | |
| TGTAATGACCGGGAACAAGT+TGG | - | chr4.1:33456070-33456089 | None:intergenic | 45.0% | |
| ! | AGGTGATGATGACTTGTGTG+AGG | + | chr4.1:33455788-33455807 | MS.gene40674:CDS | 45.0% |
| ! | GTATTTGCGGCCAAGCATTT+TGG | + | chr4.1:33456012-33456031 | MS.gene40674:CDS | 45.0% |
| !! | CAACCACCATTTTTCTCCAC+CGG | - | chr4.1:33455978-33455997 | None:intergenic | 45.0% |
| !! | GAAGCAACAAGAATGGACTG+TGG | + | chr4.1:33455120-33455139 | MS.gene40674:CDS | 45.0% |
| !! | TGGTAGAAAGCACCCTGATA+TGG | + | chr4.1:33455662-33455681 | MS.gene40674:CDS | 45.0% |
| !!! | CATTTTTCTCCACCGGTTTG+TGG | - | chr4.1:33455971-33455990 | None:intergenic | 45.0% |
| !!! | CTTTGGCCGCCTATTTTTAC+AGG | + | chr4.1:33455528-33455547 | MS.gene40674:intron | 45.0% |
| !!! | GTATGGGGATCGGTTAGTTT+TGG | + | chr4.1:33457391-33457410 | MS.gene40674:intron | 45.0% |
| !!! | TATAGATTAATTTAATTTTA+TGG | + | chr4.1:33456125-33456144 | MS.gene40674:intron | 5.0% |
| !!! | TTTATTTATTGATTAAAATT+TGG | + | chr4.1:33454137-33454156 | MS.gene40674:intron | 5.0% |
| !!! | TTTATTTTATTTTTTTTGAT+CGG | + | chr4.1:33455452-33455471 | MS.gene40674:intron | 5.0% |
| ACCAAGCCTTTACGGCAACA+TGG | - | chr4.1:33456162-33456181 | None:intergenic | 50.0% | |
| AGTATAGCTGGTCACAGCTG+TGG | + | chr4.1:33456339-33456358 | MS.gene40674:CDS | 50.0% | |
| CCACATCAAACACGAACAGG+GGG | - | chr4.1:33455868-33455887 | None:intergenic | 50.0% | |
| CCCACATCAAACACGAACAG+GGG | - | chr4.1:33455869-33455888 | None:intergenic | 50.0% | |
| CCCCTGTTCGTGTTTGATGT+GGG | + | chr4.1:33455866-33455885 | MS.gene40674:CDS | 50.0% | |
| CTACTGGCCGTGATCATACT+TGG | + | chr4.1:33456313-33456332 | MS.gene40674:CDS | 50.0% | |
| CTCCCACATCAAACACGAAC+AGG | - | chr4.1:33455871-33455890 | None:intergenic | 50.0% | |
| CTGTACAGTTGGTTGTGTGG+TGG | + | chr4.1:33456288-33456307 | MS.gene40674:intron | 50.0% | |
| GGGAATGCAATTCGTGTTGC+AGG | + | chr4.1:33455768-33455787 | MS.gene40674:CDS | 50.0% | |
| GGGATAATACGAGGGAGTTG+CGG | - | chr4.1:33457121-33457140 | None:intergenic | 50.0% | |
| GGGCAAAGAGGGATCTCTAT+AGG | + | chr4.1:33456394-33456413 | MS.gene40674:CDS | 50.0% | |
| GTGTTTGATGTGGGAGCTCT+GGG | + | chr4.1:33455875-33455894 | MS.gene40674:CDS | 50.0% | |
| TAAGCGTTAGCCGGATGACA+TGG | + | chr4.1:33455425-33455444 | MS.gene40674:intron | 50.0% | |
| TCCATGTTGCCGTAAAGGCT+TGG | + | chr4.1:33456158-33456177 | MS.gene40674:intron | 50.0% | |
| ! | ATATCATGACTCTGGCTCGC+TGG | + | chr4.1:33455047-33455066 | MS.gene40674:CDS | 50.0% |
| ! | CTGTCCAAAGTGCCACAAAC+CGG | + | chr4.1:33455956-33455975 | MS.gene40674:CDS | 50.0% |
| !!! | GGCCGCCTATTTTTACAGGT+TGG | + | chr4.1:33455532-33455551 | MS.gene40674:intron | 50.0% |
| AAGCGTGCCAGAGAAGAAGG+TGG | + | chr4.1:33457806-33457825 | MS.gene40674:CDS | 55.0% | |
| AAGGAAGGAACCTGAGCAGC+GGG | - | chr4.1:33453999-33454018 | None:intergenic | 55.0% | |
| AATCAGCTGAGCGGGCAAAG+AGG | + | chr4.1:33456382-33456401 | MS.gene40674:CDS | 55.0% | |
| AGCAGCGGGAGCAATAGAAG+AGG | - | chr4.1:33453985-33454004 | None:intergenic | 55.0% | |
| ATCAGCTGAGCGGGCAAAGA+GGG | + | chr4.1:33456383-33456402 | MS.gene40674:CDS | 55.0% | |
| CCCCCTGTTCGTGTTTGATG+TGG | + | chr4.1:33455865-33455884 | MS.gene40674:CDS | 55.0% | |
| CGGTTTGTGGCACTTTGGAC+AGG | - | chr4.1:33455958-33455977 | None:intergenic | 55.0% | |
| CGTAAGCGTGCCAGAGAAGA+AGG | + | chr4.1:33457803-33457822 | MS.gene40674:CDS | 55.0% | |
| CGTGTTTGATGTGGGAGCTC+TGG | + | chr4.1:33455874-33455893 | MS.gene40674:CDS | 55.0% | |
| GAAGGAAGGAACCTGAGCAG+CGG | - | chr4.1:33454000-33454019 | None:intergenic | 55.0% | |
| GCAGCGGGAGCAATAGAAGA+GGG | - | chr4.1:33453984-33454003 | None:intergenic | 55.0% | |
| GGATCAGCAGCAGCAGTTAG+AGG | + | chr4.1:33456707-33456726 | MS.gene40674:CDS | 55.0% | |
| TTCCCACAATGTGGCGTGCT+CGG | - | chr4.1:33455753-33455772 | None:intergenic | 55.0% | |
| TTCTATTGCTCCCGCTGCTC+AGG | + | chr4.1:33453986-33454005 | MS.gene40674:CDS | 55.0% | |
| ! | TCCAAAGTGCCACAAACCGG+TGG | + | chr4.1:33455959-33455978 | MS.gene40674:CDS | 55.0% |
| ! | TGCTCAGGCTGGTGTTAGTG+TGG | + | chr4.1:33455020-33455039 | MS.gene40674:CDS | 55.0% |
| ! | TGGTTGTGTGGTGGAGCTAC+TGG | + | chr4.1:33456297-33456316 | MS.gene40674:CDS | 55.0% |
| !! | TCCACCGGTTTGTGGCACTT+TGG | - | chr4.1:33455963-33455982 | None:intergenic | 55.0% |
| GGAGGACTTGCGCAGAGTGA+TGG | + | chr4.1:33454888-33454907 | MS.gene40674:CDS | 60.0% | |
| GTCCGAGCACGCCACATTGT+GGG | + | chr4.1:33455748-33455767 | MS.gene40674:CDS | 60.0% | |
| TGTCCGAGCACGCCACATTG+TGG | + | chr4.1:33455747-33455766 | MS.gene40674:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 33453867 | 33457874 | 33453867 | ID=MS.gene40674 |
| chr4.1 | mRNA | 33453867 | 33457874 | 33453867 | ID=MS.gene40674.t1;Parent=MS.gene40674 |
| chr4.1 | exon | 33453867 | 33454007 | 33453867 | ID=MS.gene40674.t1.exon1;Parent=MS.gene40674.t1 |
| chr4.1 | CDS | 33453867 | 33454007 | 33453867 | ID=cds.MS.gene40674.t1;Parent=MS.gene40674.t1 |
| chr4.1 | exon | 33454758 | 33454790 | 33454758 | ID=MS.gene40674.t1.exon2;Parent=MS.gene40674.t1 |
| chr4.1 | CDS | 33454758 | 33454790 | 33454758 | ID=cds.MS.gene40674.t1;Parent=MS.gene40674.t1 |
| chr4.1 | exon | 33454886 | 33455162 | 33454886 | ID=MS.gene40674.t1.exon3;Parent=MS.gene40674.t1 |
| chr4.1 | CDS | 33454886 | 33455162 | 33454886 | ID=cds.MS.gene40674.t1;Parent=MS.gene40674.t1 |
| chr4.1 | exon | 33455550 | 33456033 | 33455550 | ID=MS.gene40674.t1.exon4;Parent=MS.gene40674.t1 |
| chr4.1 | CDS | 33455550 | 33456033 | 33455550 | ID=cds.MS.gene40674.t1;Parent=MS.gene40674.t1 |
| chr4.1 | exon | 33456296 | 33456856 | 33456296 | ID=MS.gene40674.t1.exon5;Parent=MS.gene40674.t1 |
| chr4.1 | CDS | 33456296 | 33456856 | 33456296 | ID=cds.MS.gene40674.t1;Parent=MS.gene40674.t1 |
| chr4.1 | exon | 33456939 | 33457075 | 33456939 | ID=MS.gene40674.t1.exon6;Parent=MS.gene40674.t1 |
| chr4.1 | CDS | 33456939 | 33457075 | 33456939 | ID=cds.MS.gene40674.t1;Parent=MS.gene40674.t1 |
| chr4.1 | exon | 33457708 | 33457874 | 33457708 | ID=MS.gene40674.t1.exon7;Parent=MS.gene40674.t1 |
| chr4.1 | CDS | 33457708 | 33457874 | 33457708 | ID=cds.MS.gene40674.t1;Parent=MS.gene40674.t1 |
| Gene Sequence |
| Protein sequence |
