Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40733.t1 | XP_003603613.1 | 96.3 | 998 | 33 | 1 | 1 | 994 | 1 | 998 | 0.00E+00 | 1789.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40733.t1 | Q8RX56 | 33.7 | 875 | 511 | 15 | 152 | 992 | 259 | 1098 | 2.8e-132 | 474.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40733.t1 | G7J3F7 | 96.3 | 998 | 33 | 1 | 1 | 994 | 1 | 998 | 0.0e+00 | 1789.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057195 | MS.gene40733 | 0.838141 | 3.43E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40733.t1 | MTR_3g109630 | 98.998 | 998 | 6 | 1 | 1 | 994 | 1 | 998 | 0.0 | 2033 |
| MS.gene40733.t1 | MTR_1g114270 | 56.729 | 966 | 373 | 9 | 30 | 994 | 1 | 922 | 0.0 | 1117 |
| MS.gene40733.t1 | MTR_1g044480 | 38.944 | 1004 | 543 | 15 | 37 | 993 | 53 | 1033 | 0.0 | 702 |
| MS.gene40733.t1 | MTR_1g073760 | 38.338 | 999 | 560 | 15 | 37 | 993 | 31 | 1015 | 0.0 | 682 |
| MS.gene40733.t1 | MTR_6g043090 | 37.190 | 968 | 567 | 11 | 58 | 993 | 188 | 1146 | 0.0 | 663 |
| MS.gene40733.t1 | MTR_1g114190 | 43.323 | 674 | 270 | 12 | 179 | 851 | 807 | 1369 | 7.93e-165 | 521 |
| MS.gene40733.t1 | MTR_8g040190 | 31.136 | 986 | 583 | 18 | 36 | 992 | 181 | 1099 | 2.82e-135 | 435 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40733.t1 | AT2G25800 | 71.457 | 995 | 272 | 10 | 3 | 994 | 2 | 987 | 0.0 | 1447 |
| MS.gene40733.t1 | AT2G20010 | 58.628 | 962 | 382 | 10 | 37 | 994 | 2 | 951 | 0.0 | 1158 |
| MS.gene40733.t1 | AT2G20010 | 60.714 | 840 | 320 | 7 | 158 | 994 | 1 | 833 | 0.0 | 1076 |
| MS.gene40733.t1 | AT2G33420 | 39.771 | 1046 | 559 | 18 | 11 | 993 | 1 | 1038 | 0.0 | 766 |
| MS.gene40733.t1 | AT1G04470 | 38.824 | 1020 | 552 | 17 | 38 | 993 | 23 | 1034 | 0.0 | 719 |
| MS.gene40733.t1 | AT5G06970 | 33.830 | 872 | 512 | 15 | 153 | 992 | 260 | 1098 | 1.66e-146 | 465 |
| MS.gene40733.t1 | AT4G11670 | 26.808 | 899 | 557 | 21 | 150 | 991 | 227 | 1081 | 2.22e-88 | 307 |
| MS.gene40733.t1 | AT4G11670 | 26.357 | 903 | 564 | 21 | 146 | 991 | 218 | 1076 | 1.08e-85 | 300 |
| MS.gene40733.t1 | AT4G11670 | 26.327 | 923 | 563 | 23 | 150 | 991 | 227 | 1113 | 2.92e-83 | 293 |
| MS.gene40733.t1 | AT4G11670 | 25.824 | 941 | 557 | 23 | 150 | 991 | 227 | 1125 | 2.63e-81 | 288 |
Find 255 sgRNAs with CRISPR-Local
Find 350 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATGTTGTTAAAGTTTCTT+AGG | 0.168547 | 3.2:-88117990 | None:intergenic |
| TTCTACATTGACTTCGATAT+TGG | 0.198334 | 3.2:+88115239 | MS.gene40733:CDS |
| CAATGTAGAACTCAAAATTT+TGG | 0.201505 | 3.2:-88115226 | None:intergenic |
| GGCTCAAAATTTCAAGGCTT+TGG | 0.212670 | 3.2:+88117126 | MS.gene40733:CDS |
| AAAACACGTAATAATGTATT+TGG | 0.217025 | 3.2:-88117912 | None:intergenic |
| ATGGAGGGCATTGTCTCTTT+AGG | 0.233555 | 3.2:+88115324 | MS.gene40733:CDS |
| ACAAATGGGGATAGCTCTTT+TGG | 0.238042 | 3.2:+88117201 | MS.gene40733:CDS |
| CCTGGTTCTGGTTCTGCTTC+CGG | 0.244028 | 3.2:+88113836 | MS.gene40733:CDS |
| TCTGGTTCTGCTTCCGGTTC+CGG | 0.264298 | 3.2:+88113842 | MS.gene40733:CDS |
| GGTTTGAAATCTCCTGGTTC+TGG | 0.266567 | 3.2:+88113800 | MS.gene40733:CDS |
| TTCTTGTTTGTATTGCTTGC+TGG | 0.274899 | 3.2:+88117615 | MS.gene40733:CDS |
| TTGCGAATCTCGTGAAAATA+TGG | 0.276207 | 3.2:+88116386 | MS.gene40733:CDS |
| GAGTTGAAGCAATTCATTTC+AGG | 0.278627 | 3.2:+88116205 | MS.gene40733:CDS |
| TTTGGAATACTCGGAATCTT+TGG | 0.280205 | 3.2:-88115208 | None:intergenic |
| CATGGACTCGTTATTCTTCC+CGG | 0.286039 | 3.2:-88114836 | None:intergenic |
| CAGGATTGATCCGTTTCTTC+AGG | 0.286621 | 3.2:+88117497 | MS.gene40733:CDS |
| CAGTCTGTCTATTCTAGTCT+TGG | 0.288410 | 3.2:-88116410 | None:intergenic |
| GAGTTTCTCTTCTGAGAATT+TGG | 0.289177 | 3.2:-88117168 | None:intergenic |
| TTGGAGATCCCTCATCTTCC+AGG | 0.293760 | 3.2:+88117478 | MS.gene40733:CDS |
| GCCGCATGTCGAACCTCTTC+TGG | 0.301195 | 3.2:+88113638 | MS.gene40733:CDS |
| TGGAGGGCATTGTCTCTTTA+GGG | 0.304365 | 3.2:+88115325 | MS.gene40733:CDS |
| TTCTGCTTCCGGTTCCGGTC+AGG | 0.305029 | 3.2:+88113847 | MS.gene40733:CDS |
| ATAATGAGAGCTTCCTTTGA+TGG | 0.306004 | 3.2:+88117591 | MS.gene40733:CDS |
| CTCGTCAGTGCCGGCATTGT+TGG | 0.318661 | 3.2:-88117093 | None:intergenic |
| CTATGATTTGTGAATCCTTC+CGG | 0.327209 | 3.2:-88117659 | None:intergenic |
| AAGTTCTAAAGGAGCTGTTT+TGG | 0.333586 | 3.2:+88117694 | MS.gene40733:CDS |
| ATAAGCTCCCCAACCGTTAA+CGG | 0.334980 | 3.2:-88113884 | None:intergenic |
| AGTAAGGTTAAGAAGGCTTT+TGG | 0.339002 | 3.2:+88113779 | MS.gene40733:CDS |
| GAAGAGGACTCTCAAGGTTC+TGG | 0.339762 | 3.2:+88114708 | MS.gene40733:CDS |
| CCTGGGTGAATTTGATGTTC+TGG | 0.342448 | 3.2:+88117266 | MS.gene40733:CDS |
| TGCCACTGGCCAGATGGATT+TGG | 0.344716 | 3.2:+88115128 | MS.gene40733:CDS |
| TTCCACGATCAAAAGTTTCA+TGG | 0.359783 | 3.2:-88115290 | None:intergenic |
| AACTCGCAGGTTGCAACAAA+TGG | 0.362002 | 3.2:+88117186 | MS.gene40733:CDS |
| TCTACATTGACTTCGATATT+GGG | 0.363206 | 3.2:+88115240 | MS.gene40733:CDS |
| GCTCAAAATTTCAAGGCTTT+GGG | 0.363933 | 3.2:+88117127 | MS.gene40733:CDS |
| GAAGATCTCGTAGGCAGTTA+AGG | 0.364153 | 3.2:-88113612 | None:intergenic |
| CAATTTCCCCTGACCGGAAC+CGG | 0.365221 | 3.2:-88113855 | None:intergenic |
| CTTAAAACTTGAACAGCATC+AGG | 0.366499 | 3.2:-88116244 | None:intergenic |
| CTGTCATGTCTCTTGCAAAT+AGG | 0.366778 | 3.2:+88114875 | MS.gene40733:CDS |
| TTTGCATCCTTACATACCTT+TGG | 0.368824 | 3.2:+88114744 | MS.gene40733:CDS |
| GTTATTCTTCCCGGTTTCGA+TGG | 0.369414 | 3.2:-88114827 | None:intergenic |
| AAATACTTTGCAGTGGATCC+TGG | 0.374692 | 3.2:+88117248 | MS.gene40733:CDS |
| TATGATTTGTGAATCCTTCC+GGG | 0.375343 | 3.2:-88117658 | None:intergenic |
| TGTACGTTTCAATTCTTTCT+CGG | 0.375733 | 3.2:-88115425 | None:intergenic |
| TCTAAGAAGAGTCCTGGTTC+TGG | 0.378612 | 3.2:+88113824 | MS.gene40733:CDS |
| TTGGATAGGCCCATCGAAAC+CGG | 0.381362 | 3.2:+88114817 | MS.gene40733:CDS |
| GCCTACATCCTTTGCAAGAA+TGG | 0.382078 | 3.2:-88116077 | None:intergenic |
| TGCTTGCTGGAGGCCCCTCT+CGG | 0.388086 | 3.2:+88117628 | MS.gene40733:CDS |
| TCGTGGAAACGTTGAAACTA+TGG | 0.390886 | 3.2:+88115305 | MS.gene40733:CDS |
| TGTTGTTGAATCTCTTCTCT+TGG | 0.391006 | 3.2:-88113486 | None:intergenic |
| GAAATTGAAACGACCGTTAA+CGG | 0.392100 | 3.2:+88113871 | MS.gene40733:CDS |
| TCTGCTTCCGGTTCCGGTCA+GGG | 0.394873 | 3.2:+88113848 | MS.gene40733:CDS |
| CAGCCGCTGCGCAGCAGAGT+TGG | 0.396522 | 3.2:-88114773 | None:intergenic |
| AGAATGACTATTATTGTTGT+TGG | 0.398818 | 3.2:-88113696 | None:intergenic |
| GCAGATTATTCATGCTGCTT+TGG | 0.399117 | 3.2:+88114798 | MS.gene40733:CDS |
| TTGGAGTCCACAAGCAAATC+AGG | 0.401211 | 3.2:+88116781 | MS.gene40733:CDS |
| CTCTGTGTCGGTCCTGAAAA+GGG | 0.409212 | 3.2:-88117784 | None:intergenic |
| AACTTCTACGGCTGCTAGTA+AGG | 0.411095 | 3.2:+88113763 | MS.gene40733:CDS |
| ACTATTGGCTCAAAATTTCA+AGG | 0.411689 | 3.2:+88117120 | MS.gene40733:CDS |
| TTGAATCTCTTCTCTTGGAA+TGG | 0.413001 | 3.2:-88113481 | None:intergenic |
| TCTCCAGCCGCGTGTCTTGA+AGG | 0.414172 | 3.2:+88117375 | MS.gene40733:CDS |
| ACTCTCAAGGTTCTGGAGGC+TGG | 0.416060 | 3.2:+88114715 | MS.gene40733:CDS |
| GTAGAAGCATTTCATAAATC+CGG | 0.416656 | 3.2:-88114957 | None:intergenic |
| ATTCCATTACCTCCAACTTC+CGG | 0.419659 | 3.2:+88117870 | MS.gene40733:CDS |
| CGCTCAAGTTCCTGAAGAAA+CGG | 0.420917 | 3.2:-88117507 | None:intergenic |
| ACTATTATTGTTGTTGGAAG+AGG | 0.421777 | 3.2:-88113690 | None:intergenic |
| TAACGGTTGGGGAGCTTATG+AGG | 0.423194 | 3.2:+88113888 | MS.gene40733:CDS |
| CTCTCACTGATTCATGTCAC+TGG | 0.423710 | 3.2:+88114911 | MS.gene40733:CDS |
| TGAAACGACCGTTAACGGTT+GGG | 0.425777 | 3.2:+88113876 | MS.gene40733:CDS |
| AAGAAGACCTGGGGAATACT+TGG | 0.427059 | 3.2:+88115048 | MS.gene40733:CDS |
| AGATCGTCGGCGGTAGGCGG+TGG | 0.427261 | 3.2:-88113539 | None:intergenic |
| TCTACGCCATGCATCACTTC+AGG | 0.428363 | 3.2:-88116902 | None:intergenic |
| GTACGTTTCAATTCTTTCTC+GGG | 0.431558 | 3.2:-88115424 | None:intergenic |
| ACTCTGCTGCGCAGCGGCTG+CGG | 0.433323 | 3.2:+88114776 | MS.gene40733:CDS |
| TCGTCGGCGGTAGGCGGTGG+TGG | 0.434640 | 3.2:-88113536 | None:intergenic |
| TCTCTGTGTCGGTCCTGAAA+AGG | 0.436618 | 3.2:-88117785 | None:intergenic |
| CTTTGGCCACGTAATATTGA+AGG | 0.438511 | 3.2:-88116931 | None:intergenic |
| TGTCCGGAAGTTGGAGGTAA+TGG | 0.440626 | 3.2:-88117873 | None:intergenic |
| ACCACAGCCAGATTTAGCTT+TGG | 0.442738 | 3.2:-88116948 | None:intergenic |
| CTTCATTGCAGGTTGGAAGA+AGG | 0.444714 | 3.2:+88114599 | MS.gene40733:intron |
| ACTCGCAGGTTGCAACAAAT+GGG | 0.445481 | 3.2:+88117187 | MS.gene40733:CDS |
| CTGAAGAAACGGATCAATCC+TGG | 0.445795 | 3.2:-88117496 | None:intergenic |
| TACGTGGCCAAAGCTAAATC+TGG | 0.448308 | 3.2:+88116941 | MS.gene40733:CDS |
| GCACTGACGAGATGCACTAT+TGG | 0.452098 | 3.2:+88117105 | MS.gene40733:CDS |
| GCTCAGAATTTCTGCTGGAC+AGG | 0.452501 | 3.2:+88113961 | MS.gene40733:CDS |
| TTATTCTTCCCGGTTTCGAT+GGG | 0.452779 | 3.2:-88114826 | None:intergenic |
| GAATAGACAGACTGAAAGAC+TGG | 0.454811 | 3.2:+88116419 | MS.gene40733:CDS |
| GGATGATTTCAAAGTTCTAA+AGG | 0.458797 | 3.2:+88117683 | MS.gene40733:CDS |
| GACTTATCCAAAGGTATGTA+AGG | 0.460142 | 3.2:-88114751 | None:intergenic |
| ATAAAACATGGCTTAGATCA+TGG | 0.460701 | 3.2:-88117440 | None:intergenic |
| CGCAGAACTTCAACAGAAGA+TGG | 0.462658 | 3.2:-88116815 | None:intergenic |
| GCACAAGGTCTTTCTCCAAC+TGG | 0.462711 | 3.2:-88116276 | None:intergenic |
| GAGGTATTCATCGGAGAGAT+TGG | 0.474537 | 3.2:-88113588 | None:intergenic |
| ACTCAAGAGATGGCATCCTT+TGG | 0.474605 | 3.2:+88116138 | MS.gene40733:CDS |
| TTTCATCGATTTGTTGCCAC+TGG | 0.477890 | 3.2:+88115114 | MS.gene40733:CDS |
| CTCTTTAGAGACCTTTCCTT+AGG | 0.480652 | 3.2:+88113458 | MS.gene40733:CDS |
| ATGGGATTCCTCTGAATCTC+CGG | 0.480843 | 3.2:+88114938 | MS.gene40733:CDS |
| TACATTTATTCCAACAATGC+CGG | 0.483907 | 3.2:+88117083 | MS.gene40733:CDS |
| GAAACGACCGTTAACGGTTG+GGG | 0.484963 | 3.2:+88113877 | MS.gene40733:CDS |
| ATCAGATGGACCCCACTGTC+CGG | 0.485545 | 3.2:-88117889 | None:intergenic |
| GCTTGCTGGAGGCCCCTCTC+GGG | 0.487224 | 3.2:+88117629 | MS.gene40733:CDS |
| ATCACTTCAGGAAGCAATGC+AGG | 0.488114 | 3.2:-88116890 | None:intergenic |
| CGGATCAATCCTGGAAGATG+AGG | 0.488330 | 3.2:-88117487 | None:intergenic |
| ACCTCCAACTTCCGGACAGT+GGG | 0.488634 | 3.2:+88117878 | MS.gene40733:CDS |
| GATTCATGTCACTGGGCAGA+TGG | 0.489380 | 3.2:+88114919 | MS.gene40733:CDS |
| CCTCCTTGCCATTCTTGCAA+AGG | 0.490097 | 3.2:+88116069 | MS.gene40733:CDS |
| GGACCCCACTGTCCGGAAGT+TGG | 0.491064 | 3.2:-88117882 | None:intergenic |
| AATGCAGCAACTCAAGGCTT+CGG | 0.492178 | 3.2:+88114651 | MS.gene40733:CDS |
| AATGTTGTTAAAGTTTCTTA+GGG | 0.492562 | 3.2:-88117989 | None:intergenic |
| AAAGAATTGAAACGTACATC+AGG | 0.492897 | 3.2:+88115430 | MS.gene40733:CDS |
| TGCCTTCTGAAATAATAGAC+AGG | 0.494168 | 3.2:+88117733 | MS.gene40733:CDS |
| GCGTTGCTCAGAATTTCTGC+TGG | 0.499189 | 3.2:+88113956 | MS.gene40733:CDS |
| GGATGCCATCTCTTGAGTAT+TGG | 0.499480 | 3.2:-88116133 | None:intergenic |
| TATCCTTCCTGATTTGCTTG+TGG | 0.499773 | 3.2:-88116788 | None:intergenic |
| CTGCTTCCGGTTCCGGTCAG+GGG | 0.499825 | 3.2:+88113849 | MS.gene40733:CDS |
| TCAGAGATCGTTAACTTCTA+CGG | 0.500517 | 3.2:+88113751 | MS.gene40733:CDS |
| AATGCAGGATGCATTGGTAT+TGG | 0.500944 | 3.2:-88116875 | None:intergenic |
| AGATGGCATCCTTTGGCAGC+AGG | 0.503176 | 3.2:+88116145 | MS.gene40733:CDS |
| TTTAAGAGCTGCAGACCAGT+TGG | 0.503301 | 3.2:+88116261 | MS.gene40733:CDS |
| TTGAAACGACCGTTAACGGT+TGG | 0.505234 | 3.2:+88113875 | MS.gene40733:CDS |
| TTATTCATGCTGCTTTGGAT+AGG | 0.506168 | 3.2:+88114803 | MS.gene40733:CDS |
| ATCAACAAGAATACAGTGAA+TGG | 0.506366 | 3.2:+88114683 | MS.gene40733:CDS |
| GGCTGCTAGTAAGGTTAAGA+AGG | 0.508957 | 3.2:+88113772 | MS.gene40733:CDS |
| CTTTGCAAGAATGGCAAGGA+GGG | 0.509853 | 3.2:-88116068 | None:intergenic |
| GCTACCCTCCATGCATGCTA+TGG | 0.509945 | 3.2:+88116178 | MS.gene40733:CDS |
| ATCTTTAACGAAGGTGGTGA+TGG | 0.510021 | 3.2:-88113509 | None:intergenic |
| TATTGGGATGGGCAGAGAAA+AGG | 0.510276 | 3.2:+88115256 | MS.gene40733:CDS |
| AGTTGCTGCATTAGCTCAAG+TGG | 0.511277 | 3.2:-88114640 | None:intergenic |
| GAGCTTCTGTCTGATGCTGA+TGG | 0.511404 | 3.2:+88115150 | MS.gene40733:CDS |
| ATTCCTTCAAGACACGCGGC+TGG | 0.512629 | 3.2:-88117378 | None:intergenic |
| GGAAGCAATGCAGGATGCAT+TGG | 0.513711 | 3.2:-88116881 | None:intergenic |
| GGAGGGCATTGTCTCTTTAG+GGG | 0.514556 | 3.2:+88115326 | MS.gene40733:CDS |
| AACAGAGATTATGATACGTC+TGG | 0.518236 | 3.2:-88115077 | None:intergenic |
| GCCATTCTTGCAAAGGATGT+AGG | 0.520093 | 3.2:+88116076 | MS.gene40733:CDS |
| TGGAGAAAGCAGACTCAAGC+AGG | 0.520288 | 3.2:+88116014 | MS.gene40733:CDS |
| TCTTCTCTTGGAATGGCCTA+AGG | 0.521382 | 3.2:-88113474 | None:intergenic |
| ACAGAAGCTCCAAATCCATC+TGG | 0.522010 | 3.2:-88115137 | None:intergenic |
| TCTGGTTCTAAGAAGAGTCC+TGG | 0.522127 | 3.2:+88113818 | MS.gene40733:CDS |
| AAAGGGGAAGGATAGACCTC+AGG | 0.522716 | 3.2:-88117767 | None:intergenic |
| TGCAAAGGATGTAGGCAGCC+TGG | 0.523674 | 3.2:+88116084 | MS.gene40733:CDS |
| AACCTGTCTATTATTTCAGA+AGG | 0.523873 | 3.2:-88117735 | None:intergenic |
| AATAATGTATTTGGATCAGA+TGG | 0.524578 | 3.2:-88117903 | None:intergenic |
| CTTGCAAATAGGTCGTATGA+TGG | 0.527450 | 3.2:+88114886 | MS.gene40733:CDS |
| GAAAGTTGACCGAGTGGAGA+AGG | 0.529436 | 3.2:-88113563 | None:intergenic |
| TCGTTTCAATTTCCCCTGAC+CGG | 0.532155 | 3.2:-88113861 | None:intergenic |
| CCTTGTGCAGATAGCTGTTG+AGG | 0.535897 | 3.2:+88116291 | MS.gene40733:CDS |
| ACTCGTTTCCATAGCATGCA+TGG | 0.536398 | 3.2:-88116186 | None:intergenic |
| ATTTGTTGCCACTGGCCAGA+TGG | 0.538861 | 3.2:+88115122 | MS.gene40733:CDS |
| CCGGAAGCAGAACCAGAACC+AGG | 0.540336 | 3.2:-88113836 | None:intergenic |
| ACGTCTCACACGCGAATCCA+TGG | 0.540350 | 3.2:-88113933 | None:intergenic |
| AATACTTTGCAGTGGATCCT+GGG | 0.540872 | 3.2:+88117249 | MS.gene40733:CDS |
| CCGAGTCAGAACTCGCCGCT+TGG | 0.541782 | 3.2:+88113725 | MS.gene40733:CDS |
| GATGAGGGTTTCTGAAGCCA+TGG | 0.541906 | 3.2:+88113916 | MS.gene40733:CDS |
| CTCAATGAGGCTCTCTGTGT+CGG | 0.542053 | 3.2:-88117796 | None:intergenic |
| GGCATTATCTTTAACGAAGG+TGG | 0.543436 | 3.2:-88113515 | None:intergenic |
| CATTGACTTCGATATTGGGA+TGG | 0.544223 | 3.2:+88115244 | MS.gene40733:CDS |
| TGGAACAAATCAAGAAGACC+TGG | 0.545660 | 3.2:+88115037 | MS.gene40733:CDS |
| TTATGGGATAGTTTGTATGT+TGG | 0.550276 | 3.2:+88117459 | MS.gene40733:CDS |
| GCACCTTCTGCTTCGTAAGG+AGG | 0.551903 | 3.2:-88116361 | None:intergenic |
| CTCTTCTTAGAACCAGAACC+AGG | 0.557153 | 3.2:-88113812 | None:intergenic |
| ATTGCACCTTCTGCTTCGTA+AGG | 0.562101 | 3.2:-88116364 | None:intergenic |
| TTCTCAGAAGAGAAACTCGC+AGG | 0.563521 | 3.2:+88117173 | MS.gene40733:CDS |
| GAAGGAAGATCGTCGGCGGT+AGG | 0.565173 | 3.2:-88113545 | None:intergenic |
| TGAGCTAATGCAGCAACTCA+AGG | 0.568356 | 3.2:+88114645 | MS.gene40733:CDS |
| ATTCATGTCACTGGGCAGAT+GGG | 0.568585 | 3.2:+88114920 | MS.gene40733:CDS |
| GAAGCTGAAAGAATGCATCC+AGG | 0.568789 | 3.2:-88116853 | None:intergenic |
| AGACATATAAATCTTCTGCC+AGG | 0.568965 | 3.2:+88117841 | MS.gene40733:CDS |
| ATAGTGCATCTCGTCAGTGC+CGG | 0.569024 | 3.2:-88117102 | None:intergenic |
| TTGCAAGAATGGCAAGGAGG+GGG | 0.571275 | 3.2:-88116066 | None:intergenic |
| GACGATCTTCCTTCTCCACT+CGG | 0.573451 | 3.2:+88113554 | MS.gene40733:CDS |
| TTGTTTGTATTGCTTGCTGG+AGG | 0.576276 | 3.2:+88117618 | MS.gene40733:CDS |
| GCCTCATTGAGCAGTTTAGA+CGG | 0.577385 | 3.2:+88117808 | MS.gene40733:CDS |
| AATACAGTGAATGGCAGAAG+AGG | 0.578035 | 3.2:+88114692 | MS.gene40733:CDS |
| ATTGACTTCGATATTGGGAT+GGG | 0.578379 | 3.2:+88115245 | MS.gene40733:CDS |
| TCATAAATCCGGAGATTCAG+AGG | 0.580170 | 3.2:-88114946 | None:intergenic |
| GAAGAATAACGAGTCCATGC+AGG | 0.580172 | 3.2:+88114840 | MS.gene40733:CDS |
| TCTTGGAATGGCCTAAGGAA+AGG | 0.581203 | 3.2:-88113469 | None:intergenic |
| GATTCAGTGGACAGTGATGA+TGG | 0.583618 | 3.2:+88116313 | MS.gene40733:CDS |
| TTCGCATAAATACTTTGCAG+TGG | 0.584932 | 3.2:+88117241 | MS.gene40733:CDS |
| TGGATAGGCCCATCGAAACC+GGG | 0.585233 | 3.2:+88114818 | MS.gene40733:CDS |
| TACAAACAAGAATCCATCAA+AGG | 0.587937 | 3.2:-88117604 | None:intergenic |
| TCTCACTGATTCATGTCACT+GGG | 0.588827 | 3.2:+88114912 | MS.gene40733:CDS |
| AAGGGGAAGGATAGACCTCA+GGG | 0.591323 | 3.2:-88117766 | None:intergenic |
| GCGAATCATAAATGAAACCC+TGG | 0.591476 | 3.2:+88116835 | MS.gene40733:CDS |
| GCCAAAGCTAAATCTGGCTG+TGG | 0.591978 | 3.2:+88116947 | MS.gene40733:CDS |
| GGTGGCATTATCTTTAACGA+AGG | 0.592180 | 3.2:-88113518 | None:intergenic |
| GATAGCTGTTGAGGATTCAG+TGG | 0.593196 | 3.2:+88116300 | MS.gene40733:CDS |
| GTTCAATCCAAGTATTCCCC+AGG | 0.593786 | 3.2:-88115055 | None:intergenic |
| GGAACAAATCAAGAAGACCT+GGG | 0.600803 | 3.2:+88115038 | MS.gene40733:CDS |
| TGGAAGAAGGATTGAGTCTG+TGG | 0.601665 | 3.2:+88114612 | MS.gene40733:CDS |
| GTATTCATCGGAGAGATTGG+TGG | 0.602433 | 3.2:-88113585 | None:intergenic |
| CCAGAACATCAAATTCACCC+AGG | 0.604022 | 3.2:-88117266 | None:intergenic |
| ACCAGAAGAGGTTCGACATG+CGG | 0.604617 | 3.2:-88113639 | None:intergenic |
| TTAAAACTTGAACAGCATCA+GGG | 0.605982 | 3.2:-88116243 | None:intergenic |
| AGCTTATGAGGAATCAGATG+AGG | 0.607480 | 3.2:+88113900 | MS.gene40733:CDS |
| TCTGTGTCGGTCCTGAAAAG+GGG | 0.608220 | 3.2:-88117783 | None:intergenic |
| CCCCACTGTCCGGAAGTTGG+AGG | 0.609288 | 3.2:-88117879 | None:intergenic |
| AAGCTGAAAGAATGCATCCA+GGG | 0.609415 | 3.2:-88116852 | None:intergenic |
| ACTGAGAGGCTTACCAGAAG+AGG | 0.611640 | 3.2:-88113651 | None:intergenic |
| ACAGCAAGACCTGCTGCCAA+AGG | 0.613633 | 3.2:-88116154 | None:intergenic |
| CCAAGCGGCGAGTTCTGACT+CGG | 0.613768 | 3.2:-88113725 | None:intergenic |
| TGGAAACGTTGAAACTATGG+AGG | 0.615215 | 3.2:+88115308 | MS.gene40733:CDS |
| TTTGGCAGCAGGTCTTGCTG+TGG | 0.615431 | 3.2:+88116156 | MS.gene40733:CDS |
| GGAAGATCGTCGGCGGTAGG+CGG | 0.615592 | 3.2:-88113542 | None:intergenic |
| AGTTAAGGTGAGGTATTCAT+CGG | 0.619093 | 3.2:-88113597 | None:intergenic |
| TCAGTCCAATACTCAAGAGA+TGG | 0.621303 | 3.2:+88116128 | MS.gene40733:CDS |
| TACCTCCAACTTCCGGACAG+TGG | 0.623157 | 3.2:+88117877 | MS.gene40733:CDS |
| TTTGCAAGAATGGCAAGGAG+GGG | 0.623362 | 3.2:-88116067 | None:intergenic |
| GAAGGATTCACAAATCATAG+AGG | 0.624526 | 3.2:+88117662 | MS.gene40733:CDS |
| GGATCAATCCTGGAAGATGA+GGG | 0.625391 | 3.2:-88117486 | None:intergenic |
| CTCCAAATCCATCTGGCCAG+TGG | 0.625417 | 3.2:-88115130 | None:intergenic |
| GAAAGCAGACTCAAGCAGGA+GGG | 0.626703 | 3.2:+88116018 | MS.gene40733:CDS |
| TGTCGGTCCTGAAAAGGGGA+AGG | 0.627708 | 3.2:-88117779 | None:intergenic |
| TTTATGCGAACACAGAGTTG+TGG | 0.627937 | 3.2:-88117228 | None:intergenic |
| CCTTTGCAAGAATGGCAAGG+AGG | 0.631775 | 3.2:-88116069 | None:intergenic |
| TGATAGAAATCTGCAGCAAG+AGG | 0.632292 | 3.2:+88116444 | MS.gene40733:CDS |
| ATGCCTCCTTACGAAGCAGA+AGG | 0.634351 | 3.2:+88116358 | MS.gene40733:CDS |
| CCTCAACAGCTATCTGCACA+AGG | 0.635306 | 3.2:-88116291 | None:intergenic |
| TCCGTCTAAACTGCTCAATG+AGG | 0.636700 | 3.2:-88117809 | None:intergenic |
| GAGGACTCTCAAGGTTCTGG+AGG | 0.638648 | 3.2:+88114711 | MS.gene40733:CDS |
| GCTTATGAGGAATCAGATGA+GGG | 0.638968 | 3.2:+88113901 | MS.gene40733:CDS |
| TAAAACTTGAACAGCATCAG+GGG | 0.639874 | 3.2:-88116242 | None:intergenic |
| AGCGGCTAAGATATTGCTTG+AGG | 0.639941 | 3.2:+88115353 | MS.gene40733:CDS |
| CTCGCAGGTTGCAACAAATG+GGG | 0.641472 | 3.2:+88117188 | MS.gene40733:CDS |
| GTTTCCATAGCATGCATGGA+GGG | 0.644542 | 3.2:-88116182 | None:intergenic |
| ACAAACTATCCCATAAAACA+TGG | 0.645581 | 3.2:-88117452 | None:intergenic |
| TTGCTTCCTGAAGTGATGCA+TGG | 0.649727 | 3.2:+88116896 | MS.gene40733:CDS |
| GAGTGGAGAAGGAAGATCGT+CGG | 0.649957 | 3.2:-88113552 | None:intergenic |
| CATCCTTTGCAAGAATGGCA+AGG | 0.651566 | 3.2:-88116072 | None:intergenic |
| AGAAAGCAGACTCAAGCAGG+AGG | 0.652723 | 3.2:+88116017 | MS.gene40733:CDS |
| AGAACTACGAAGAACCTGCA+TGG | 0.652762 | 3.2:-88114854 | None:intergenic |
| ATATATCTAATGAATATCGT+CGG | 0.658453 | 3.2:+88115376 | MS.gene40733:CDS |
| TGTCTCTTTAGGGGTAGCAG+CGG | 0.659641 | 3.2:+88115335 | MS.gene40733:CDS |
| ATGGCAGAAGAGGACTCTCA+AGG | 0.662747 | 3.2:+88114702 | MS.gene40733:CDS |
| GCAGAGTTGGACTTATCCAA+AGG | 0.663196 | 3.2:-88114760 | None:intergenic |
| CGTTTCCATAGCATGCATGG+AGG | 0.666154 | 3.2:-88116183 | None:intergenic |
| TCTCGTAGGCAGTTAAGGTG+AGG | 0.668289 | 3.2:-88113607 | None:intergenic |
| CTGAATTCCTTCAAGACACG+CGG | 0.671823 | 3.2:-88117382 | None:intergenic |
| AATAGACAGACTGAAAGACT+GGG | 0.674683 | 3.2:+88116420 | MS.gene40733:CDS |
| GGAAACGTTGAAACTATGGA+GGG | 0.678419 | 3.2:+88115309 | MS.gene40733:CDS |
| TTGGTGGAAAGTTGACCGAG+TGG | 0.679788 | 3.2:-88113569 | None:intergenic |
| AGGAATTCAGCAGCTATGTG+AGG | 0.683434 | 3.2:+88117395 | MS.gene40733:CDS |
| AGGTAATGGAATTCTAGACC+TGG | 0.684017 | 3.2:-88117859 | None:intergenic |
| TATCTAATGAATATCGTCGG+AGG | 0.690045 | 3.2:+88115379 | MS.gene40733:CDS |
| AACGATCTCTGAATACCAAG+CGG | 0.693612 | 3.2:-88113740 | None:intergenic |
| TTAGCAATTGATGAACTGAG+AGG | 0.694391 | 3.2:-88113665 | None:intergenic |
| GAACAAATCAAGAAGACCTG+GGG | 0.694702 | 3.2:+88115039 | MS.gene40733:CDS |
| AGTCCACAAGCAAATCAGGA+AGG | 0.695524 | 3.2:+88116785 | MS.gene40733:CDS |
| AGTCCAACTCTGCTGCGCAG+CGG | 0.703256 | 3.2:+88114770 | MS.gene40733:CDS |
| TGCGGCGACGAAGATCTCGT+AGG | 0.722455 | 3.2:-88113621 | None:intergenic |
| ACAGGTTTGCAACTACCCTG+AGG | 0.728126 | 3.2:+88117751 | MS.gene40733:CDS |
| TGGAGAAGGAAGATCGTCGG+CGG | 0.730872 | 3.2:-88113549 | None:intergenic |
| TAGATGCCTTCAATATTACG+TGG | 0.734258 | 3.2:+88116925 | MS.gene40733:CDS |
| CCTCCAACTTCCGGACAGTG+GGG | 0.745165 | 3.2:+88117879 | MS.gene40733:CDS |
| TCAGTGGACAGTGATGATGG+TGG | 0.776008 | 3.2:+88116316 | MS.gene40733:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTCAATATTCAATTAT+TGG | + | chr3.2:88114073-88114092 | MS.gene40733:intron | 10.0% |
| !! | TTTAATTATTCTTTAGTAAA+AGG | + | chr3.2:88115505-88115524 | MS.gene40733:intron | 10.0% |
| !! | TGTAAACCAAAAAATTTAAT+TGG | - | chr3.2:88115764-88115783 | None:intergenic | 15.0% |
| !!! | AAAGAATAATTACTCTTTTA+CGG | + | chr3.2:88117292-88117311 | MS.gene40733:CDS | 15.0% |
| !!! | AATATTCTTTTAGTTGATTA+GGG | + | chr3.2:88116649-88116668 | MS.gene40733:intron | 15.0% |
| !!! | ATTAAATTTTTTGGTTTACA+AGG | + | chr3.2:88115764-88115783 | MS.gene40733:intron | 15.0% |
| !! | AAAACACGTAATAATGTATT+TGG | - | chr3.2:88117915-88117934 | None:intergenic | 20.0% |
| !! | ATATATCTAATGAATATCGT+CGG | + | chr3.2:88115376-88115395 | MS.gene40733:CDS | 20.0% |
| !! | ATCTTTAATAACTGTATATG+TGG | + | chr3.2:88117012-88117031 | MS.gene40733:intron | 20.0% |
| !! | ATTTAATTGGCATGTAAATA+TGG | - | chr3.2:88115751-88115770 | None:intergenic | 20.0% |
| !!! | AATAGTTTAGCTCTTATATA+TGG | + | chr3.2:88116988-88117007 | MS.gene40733:intron | 20.0% |
| !!! | CAATATTCTTTTAGTTGATT+AGG | + | chr3.2:88116648-88116667 | MS.gene40733:intron | 20.0% |
| !!! | GATGATTTTTCGTTTTTATT+TGG | + | chr3.2:88114040-88114059 | MS.gene40733:intron | 20.0% |
| !!! | TACATGCCAATTAAATTTTT+TGG | + | chr3.2:88115755-88115774 | MS.gene40733:intron | 20.0% |
| !!! | TCAAAAGCTCTAATTAATTT+TGG | - | chr3.2:88114285-88114304 | None:intergenic | 20.0% |
| !!! | TGCATAGATTTTACTTATAA+AGG | + | chr3.2:88115657-88115676 | MS.gene40733:intron | 20.0% |
| !!! | TGTTACTTGAAAAAATGTTA+GGG | + | chr3.2:88116521-88116540 | MS.gene40733:intron | 20.0% |
| !!! | TGTTTTTTATTCCAATATTC+AGG | + | chr3.2:88117051-88117070 | MS.gene40733:intron | 20.0% |
| !!! | TTGTTACTTGAAAAAATGTT+AGG | + | chr3.2:88116520-88116539 | MS.gene40733:intron | 20.0% |
| !!! | TTTTACTTTTTAGTTGAACA+TGG | + | chr3.2:88114552-88114571 | MS.gene40733:intron | 20.0% |
| ! | AATAAACATTTACACAGACA+AGG | - | chr3.2:88114467-88114486 | None:intergenic | 25.0% |
| ! | AATAATGTATTTGGATCAGA+TGG | - | chr3.2:88117906-88117925 | None:intergenic | 25.0% |
| ! | AATGTAAAGTAATTCATGCT+TGG | - | chr3.2:88114367-88114386 | None:intergenic | 25.0% |
| ! | AGAATGACTATTATTGTTGT+TGG | - | chr3.2:88113699-88113718 | None:intergenic | 25.0% |
| ! | AGTCAAACAACAAATTTGAA+TGG | - | chr3.2:88114325-88114344 | None:intergenic | 25.0% |
| ! | ATAAATAACATGCTATTGCA+CGG | - | chr3.2:88115862-88115881 | None:intergenic | 25.0% |
| ! | ATTTCAACAAACAGTATCAT+TGG | - | chr3.2:88114175-88114194 | None:intergenic | 25.0% |
| ! | ATTTGCATTGGAATTGAAAA+GGG | + | chr3.2:88114512-88114531 | MS.gene40733:intron | 25.0% |
| ! | GAAAAATCATCAACAAATTC+TGG | - | chr3.2:88114031-88114050 | None:intergenic | 25.0% |
| ! | GATTAGGGATAATATGTTTA+TGG | + | chr3.2:88116664-88116683 | MS.gene40733:intron | 25.0% |
| ! | TCACAATGAATATCATCAAT+GGG | - | chr3.2:88116498-88116517 | None:intergenic | 25.0% |
| ! | TGATTAATTTCTGTGTATTC+TGG | + | chr3.2:88116696-88116715 | MS.gene40733:intron | 25.0% |
| !! | ATCATAATCTCTGTTTTACT+TGG | + | chr3.2:88115085-88115104 | MS.gene40733:CDS | 25.0% |
| !! | CAATGTAGAACTCAAAATTT+TGG | - | chr3.2:88115229-88115248 | None:intergenic | 25.0% |
| !! | GCTTTACAAACTAGAATTTT+GGG | + | chr3.2:88115697-88115716 | MS.gene40733:intron | 25.0% |
| !! | TCATAATCTCTGTTTTACTT+GGG | + | chr3.2:88115086-88115105 | MS.gene40733:CDS | 25.0% |
| !! | TGCAATAGCATGTTATTTAT+GGG | + | chr3.2:88115862-88115881 | MS.gene40733:intron | 25.0% |
| !! | TGCTTTACAAACTAGAATTT+TGG | + | chr3.2:88115696-88115715 | MS.gene40733:intron | 25.0% |
| !!! | ACTCAAAATTTTGGAATACT+CGG | - | chr3.2:88115220-88115239 | None:intergenic | 25.0% |
| !!! | AGAGAAGAAGATTTTTCAAA+CGG | + | chr3.2:88117330-88117349 | MS.gene40733:CDS | 25.0% |
| !!! | GATTTTGAGTGAATTGATTA+AGG | - | chr3.2:88114404-88114423 | None:intergenic | 25.0% |
| !!! | TTGGAATTTGCTTTTAACTT+TGG | + | chr3.2:88115585-88115604 | MS.gene40733:intron | 25.0% |
| AAAGAATTGAAACGTACATC+AGG | + | chr3.2:88115430-88115449 | MS.gene40733:CDS | 30.0% | |
| AACCTGTCTATTATTTCAGA+AGG | - | chr3.2:88117738-88117757 | None:intergenic | 30.0% | |
| ACAAACTATCCCATAAAACA+TGG | - | chr3.2:88117455-88117474 | None:intergenic | 30.0% | |
| ACAGTATCATTGGATTAAAG+TGG | - | chr3.2:88114165-88114184 | None:intergenic | 30.0% | |
| ACTATGTTAGTTCCACATAA+AGG | - | chr3.2:88116742-88116761 | None:intergenic | 30.0% | |
| AGTGAATTGATTAAGGCTAA+AGG | - | chr3.2:88114397-88114416 | None:intergenic | 30.0% | |
| ATCAACAAGAATACAGTGAA+TGG | + | chr3.2:88114683-88114702 | MS.gene40733:CDS | 30.0% | |
| ATTAAGTCATTGCAAACTGT+GGG | + | chr3.2:88116596-88116615 | MS.gene40733:intron | 30.0% | |
| GAATGCTAAGAGATGTTTAA+AGG | - | chr3.2:88115611-88115630 | None:intergenic | 30.0% | |
| GATTTGCATTGGAATTGAAA+AGG | + | chr3.2:88114511-88114530 | MS.gene40733:intron | 30.0% | |
| GTCACAATGAATATCATCAA+TGG | - | chr3.2:88116499-88116518 | None:intergenic | 30.0% | |
| GTTTGAAAAATCTTCTTCTC+TGG | - | chr3.2:88117331-88117350 | None:intergenic | 30.0% | |
| TACAAACAAGAATCCATCAA+AGG | - | chr3.2:88117607-88117626 | None:intergenic | 30.0% | |
| TACATTTATTCCAACAATGC+CGG | + | chr3.2:88117083-88117102 | MS.gene40733:CDS | 30.0% | |
| TATTTCGAGATCCTGAATAT+TGG | - | chr3.2:88117065-88117084 | None:intergenic | 30.0% | |
| TGTACGTTTCAATTCTTTCT+CGG | - | chr3.2:88115428-88115447 | None:intergenic | 30.0% | |
| TGTGTAAGTAAGTGTATGAT+TGG | + | chr3.2:88114242-88114261 | MS.gene40733:intron | 30.0% | |
| TTAAAACTTGAACAGCATCA+GGG | - | chr3.2:88116246-88116265 | None:intergenic | 30.0% | |
| TTGACTAGATTCATTCCATA+AGG | + | chr3.2:88114199-88114218 | MS.gene40733:intron | 30.0% | |
| ! | ACTATTATTGTTGTTGGAAG+AGG | - | chr3.2:88113693-88113712 | None:intergenic | 30.0% |
| ! | GGATGATTTCAAAGTTCTAA+AGG | + | chr3.2:88117683-88117702 | MS.gene40733:CDS | 30.0% |
| ! | GTGCAATAGCATGTTATTTA+TGG | + | chr3.2:88115861-88115880 | MS.gene40733:intron | 30.0% |
| ! | TTATGGGATAGTTTGTATGT+TGG | + | chr3.2:88117459-88117478 | MS.gene40733:CDS | 30.0% |
| !! | ACTATTGGCTCAAAATTTCA+AGG | + | chr3.2:88117120-88117139 | MS.gene40733:CDS | 30.0% |
| !! | GTAGAAGCATTTCATAAATC+CGG | - | chr3.2:88114960-88114979 | None:intergenic | 30.0% |
| !! | TCTACATTGACTTCGATATT+GGG | + | chr3.2:88115240-88115259 | MS.gene40733:CDS | 30.0% |
| !! | TGAAGATTTTGATGAGCTAA+TGG | + | chr3.2:88115017-88115036 | MS.gene40733:CDS | 30.0% |
| !! | TTCTACATTGACTTCGATAT+TGG | + | chr3.2:88115239-88115258 | MS.gene40733:CDS | 30.0% |
| !!! | AATTTTGGCTACTCAAAAAG+TGG | - | chr3.2:88114270-88114289 | None:intergenic | 30.0% |
| AACAGAGATTATGATACGTC+TGG | - | chr3.2:88115080-88115099 | None:intergenic | 35.0% | |
| AATAGACAGACTGAAAGACT+GGG | + | chr3.2:88116420-88116439 | MS.gene40733:CDS | 35.0% | |
| ACAGACTATATAAACTTGCC+TGG | - | chr3.2:88115479-88115498 | None:intergenic | 35.0% | |
| ACTTAACGAAGAACACCTTA+TGG | - | chr3.2:88114217-88114236 | None:intergenic | 35.0% | |
| AGACATATAAATCTTCTGCC+AGG | + | chr3.2:88117841-88117860 | MS.gene40733:CDS | 35.0% | |
| AGTGCTTAATGTGAGAGAAT+TGG | + | chr3.2:88115566-88115585 | MS.gene40733:intron | 35.0% | |
| ATAATGAGAGCTTCCTTTGA+TGG | + | chr3.2:88117591-88117610 | MS.gene40733:CDS | 35.0% | |
| CAGACTATATAAACTTGCCT+GGG | - | chr3.2:88115478-88115497 | None:intergenic | 35.0% | |
| CATTAAGTCATTGCAAACTG+TGG | + | chr3.2:88116595-88116614 | MS.gene40733:intron | 35.0% | |
| CTTAAAACTTGAACAGCATC+AGG | - | chr3.2:88116247-88116266 | None:intergenic | 35.0% | |
| GAAATTGAAACGACCGTTAA+CGG | + | chr3.2:88113871-88113890 | MS.gene40733:CDS | 35.0% | |
| GAAGGATTCACAAATCATAG+AGG | + | chr3.2:88117662-88117681 | MS.gene40733:CDS | 35.0% | |
| GAGTTGAAGCAATTCATTTC+AGG | + | chr3.2:88116205-88116224 | MS.gene40733:CDS | 35.0% | |
| GCTCAAAATTTCAAGGCTTT+GGG | + | chr3.2:88117127-88117146 | MS.gene40733:CDS | 35.0% | |
| GGAATAATTAAGCGTGTGTT+TGG | - | chr3.2:88114446-88114465 | None:intergenic | 35.0% | |
| GTACGTTTCAATTCTTTCTC+GGG | - | chr3.2:88115427-88115446 | None:intergenic | 35.0% | |
| GTCAATTGATTGCCTTTATG+TGG | + | chr3.2:88116727-88116746 | MS.gene40733:intron | 35.0% | |
| GTCTTATGTTCTCTTGAGTT+TGG | - | chr3.2:88116565-88116584 | None:intergenic | 35.0% | |
| GTTTGTTCATGAACAAACCT+AGG | + | chr3.2:88115831-88115850 | MS.gene40733:intron | 35.0% | |
| TAAAACTTGAACAGCATCAG+GGG | - | chr3.2:88116245-88116264 | None:intergenic | 35.0% | |
| TAGATGCCTTCAATATTACG+TGG | + | chr3.2:88116925-88116944 | MS.gene40733:CDS | 35.0% | |
| TATCTAATGAATATCGTCGG+AGG | + | chr3.2:88115379-88115398 | MS.gene40733:CDS | 35.0% | |
| TCAGAGATCGTTAACTTCTA+CGG | + | chr3.2:88113751-88113770 | MS.gene40733:CDS | 35.0% | |
| TGACTACACTAGATTTGCAT+TGG | + | chr3.2:88114500-88114519 | MS.gene40733:intron | 35.0% | |
| TGTTGTTGAATCTCTTCTCT+TGG | - | chr3.2:88113489-88113508 | None:intergenic | 35.0% | |
| TTACTGTGATATCCTAGCTT+TGG | + | chr3.2:88116762-88116781 | MS.gene40733:intron | 35.0% | |
| TTAGCAATTGATGAACTGAG+AGG | - | chr3.2:88113668-88113687 | None:intergenic | 35.0% | |
| TTCCACGATCAAAAGTTTCA+TGG | - | chr3.2:88115293-88115312 | None:intergenic | 35.0% | |
| TTCGCATAAATACTTTGCAG+TGG | + | chr3.2:88117241-88117260 | MS.gene40733:CDS | 35.0% | |
| TTGAATCTCTTCTCTTGGAA+TGG | - | chr3.2:88113484-88113503 | None:intergenic | 35.0% | |
| TTGCGAATCTCGTGAAAATA+TGG | + | chr3.2:88116386-88116405 | MS.gene40733:CDS | 35.0% | |
| TTTGCATCCTTACATACCTT+TGG | + | chr3.2:88114744-88114763 | MS.gene40733:CDS | 35.0% | |
| ! | AGTAAGGTTAAGAAGGCTTT+TGG | + | chr3.2:88113779-88113798 | MS.gene40733:CDS | 35.0% |
| ! | AGTTAAGGTGAGGTATTCAT+CGG | - | chr3.2:88113600-88113619 | None:intergenic | 35.0% |
| ! | ATTGACTTCGATATTGGGAT+GGG | + | chr3.2:88115245-88115264 | MS.gene40733:CDS | 35.0% |
| ! | CTATGATTTGTGAATCCTTC+CGG | - | chr3.2:88117662-88117681 | None:intergenic | 35.0% |
| ! | GACTTATCCAAAGGTATGTA+AGG | - | chr3.2:88114754-88114773 | None:intergenic | 35.0% |
| ! | GAGTTTCTCTTCTGAGAATT+TGG | - | chr3.2:88117171-88117190 | None:intergenic | 35.0% |
| ! | TAACTTGTGAACTTCATTGC+AGG | + | chr3.2:88114588-88114607 | MS.gene40733:intron | 35.0% |
| ! | TACCATGAAACTTTTGATCG+TGG | + | chr3.2:88115288-88115307 | MS.gene40733:CDS | 35.0% |
| ! | TATGATTTGTGAATCCTTCC+GGG | - | chr3.2:88117661-88117680 | None:intergenic | 35.0% |
| ! | TTCTTGTTTGTATTGCTTGC+TGG | + | chr3.2:88117615-88117634 | MS.gene40733:CDS | 35.0% |
| ! | TTGTTGAGTTGTGCAAGTAA+CGG | + | chr3.2:88115805-88115824 | MS.gene40733:intron | 35.0% |
| ! | TTTGGAATACTCGGAATCTT+TGG | - | chr3.2:88115211-88115230 | None:intergenic | 35.0% |
| ! | TTTTGCTGCTGCATAGATAA+TGG | + | chr3.2:88115994-88116013 | MS.gene40733:intron | 35.0% |
| !! | TGCCTTCTGAAATAATAGAC+AGG | + | chr3.2:88117733-88117752 | MS.gene40733:CDS | 35.0% |
| !! | TTATTCATGCTGCTTTGGAT+AGG | + | chr3.2:88114803-88114822 | MS.gene40733:CDS | 35.0% |
| !!! | AAGTTCTAAAGGAGCTGTTT+TGG | + | chr3.2:88117694-88117713 | MS.gene40733:CDS | 35.0% |
| !!! | AGTTCTAAAGGAGCTGTTTT+GGG | + | chr3.2:88117695-88117714 | MS.gene40733:CDS | 35.0% |
| !!! | CTGCTTTTTTGATCTGCTTT+TGG | + | chr3.2:88114106-88114125 | MS.gene40733:intron | 35.0% |
| AAATACTTTGCAGTGGATCC+TGG | + | chr3.2:88117248-88117267 | MS.gene40733:CDS | 40.0% | |
| AACGATCTCTGAATACCAAG+CGG | - | chr3.2:88113743-88113762 | None:intergenic | 40.0% | |
| AAGCTGAAAGAATGCATCCA+GGG | - | chr3.2:88116855-88116874 | None:intergenic | 40.0% | |
| AATACAGTGAATGGCAGAAG+AGG | + | chr3.2:88114692-88114711 | MS.gene40733:CDS | 40.0% | |
| AATACTTTGCAGTGGATCCT+GGG | + | chr3.2:88117249-88117268 | MS.gene40733:CDS | 40.0% | |
| AGCTTATGAGGAATCAGATG+AGG | + | chr3.2:88113900-88113919 | MS.gene40733:CDS | 40.0% | |
| AGTAAAAGGTGACAAACTCG+AGG | + | chr3.2:88115519-88115538 | MS.gene40733:intron | 40.0% | |
| ATCTTTAACGAAGGTGGTGA+TGG | - | chr3.2:88113512-88113531 | None:intergenic | 40.0% | |
| ATTCCAATGCATGTACAGTG+TGG | + | chr3.2:88113997-88114016 | MS.gene40733:intron | 40.0% | |
| ATTCCATTACCTCCAACTTC+CGG | + | chr3.2:88117870-88117889 | MS.gene40733:CDS | 40.0% | |
| CAGTCTGTCTATTCTAGTCT+TGG | - | chr3.2:88116413-88116432 | None:intergenic | 40.0% | |
| CTGTCATGTCTCTTGCAAAT+AGG | + | chr3.2:88114875-88114894 | MS.gene40733:CDS | 40.0% | |
| CTTGCAAATAGGTCGTATGA+TGG | + | chr3.2:88114886-88114905 | MS.gene40733:CDS | 40.0% | |
| CTTTGGCCACGTAATATTGA+AGG | - | chr3.2:88116934-88116953 | None:intergenic | 40.0% | |
| GAACAAATCAAGAAGACCTG+GGG | + | chr3.2:88115039-88115058 | MS.gene40733:CDS | 40.0% | |
| GAATAGACAGACTGAAAGAC+TGG | + | chr3.2:88116419-88116438 | MS.gene40733:CDS | 40.0% | |
| GCGAATCATAAATGAAACCC+TGG | + | chr3.2:88116835-88116854 | MS.gene40733:CDS | 40.0% | |
| GCTTATGAGGAATCAGATGA+GGG | + | chr3.2:88113901-88113920 | MS.gene40733:CDS | 40.0% | |
| GGAAACGTTGAAACTATGGA+GGG | + | chr3.2:88115309-88115328 | MS.gene40733:CDS | 40.0% | |
| GGAACAAATCAAGAAGACCT+GGG | + | chr3.2:88115038-88115057 | MS.gene40733:CDS | 40.0% | |
| GGCATTATCTTTAACGAAGG+TGG | - | chr3.2:88113518-88113537 | None:intergenic | 40.0% | |
| GGCTCAAAATTTCAAGGCTT+TGG | + | chr3.2:88117126-88117145 | MS.gene40733:CDS | 40.0% | |
| GGTGGCATTATCTTTAACGA+AGG | - | chr3.2:88113521-88113540 | None:intergenic | 40.0% | |
| TCAGTCCAATACTCAAGAGA+TGG | + | chr3.2:88116128-88116147 | MS.gene40733:CDS | 40.0% | |
| TCATAAATCCGGAGATTCAG+AGG | - | chr3.2:88114949-88114968 | None:intergenic | 40.0% | |
| TCGTGGAAACGTTGAAACTA+TGG | + | chr3.2:88115305-88115324 | MS.gene40733:CDS | 40.0% | |
| TGATAGAAATCTGCAGCAAG+AGG | + | chr3.2:88116444-88116463 | MS.gene40733:CDS | 40.0% | |
| TGGAAACGTTGAAACTATGG+AGG | + | chr3.2:88115308-88115327 | MS.gene40733:CDS | 40.0% | |
| TGGAACAAATCAAGAAGACC+TGG | + | chr3.2:88115037-88115056 | MS.gene40733:CDS | 40.0% | |
| TTAAGCACTATTACCATCGC+AGG | - | chr3.2:88115555-88115574 | None:intergenic | 40.0% | |
| TTATTCTTCCCGGTTTCGAT+GGG | - | chr3.2:88114829-88114848 | None:intergenic | 40.0% | |
| TTGTGAACTTCATTGCAGGT+TGG | + | chr3.2:88114592-88114611 | MS.gene40733:intron | 40.0% | |
| TTTATGCGAACACAGAGTTG+TGG | - | chr3.2:88117231-88117250 | None:intergenic | 40.0% | |
| ! | AATGCAGGATGCATTGGTAT+TGG | - | chr3.2:88116878-88116897 | None:intergenic | 40.0% |
| ! | ACAAATGGGGATAGCTCTTT+TGG | + | chr3.2:88117201-88117220 | MS.gene40733:CDS | 40.0% |
| ! | CAAATGGGGATAGCTCTTTT+GGG | + | chr3.2:88117202-88117221 | MS.gene40733:CDS | 40.0% |
| ! | CAAGGCAAACAAGCTTTATC+AGG | + | chr3.2:88115782-88115801 | MS.gene40733:intron | 40.0% |
| ! | CTCTTTAGAGACCTTTCCTT+AGG | + | chr3.2:88113458-88113477 | MS.gene40733:CDS | 40.0% |
| ! | GCAGATTATTCATGCTGCTT+TGG | + | chr3.2:88114798-88114817 | MS.gene40733:CDS | 40.0% |
| ! | TGTTGAGTTGTGCAAGTAAC+GGG | + | chr3.2:88115806-88115825 | MS.gene40733:intron | 40.0% |
| ! | TTGTTTGTATTGCTTGCTGG+AGG | + | chr3.2:88117618-88117637 | MS.gene40733:CDS | 40.0% |
| !! | AGGTAATGGAATTCTAGACC+TGG | - | chr3.2:88117862-88117881 | None:intergenic | 40.0% |
| !! | ATTTTGGGTGACTAAGCAAG+TGG | + | chr3.2:88115712-88115731 | MS.gene40733:intron | 40.0% |
| !! | CATTGACTTCGATATTGGGA+TGG | + | chr3.2:88115244-88115263 | MS.gene40733:CDS | 40.0% |
| !! | CTAGCTTTTCATTAACTGCC+AGG | - | chr3.2:88116105-88116124 | None:intergenic | 40.0% |
| !! | TAAGCGTGTGTTTGGCTTTA+CGG | - | chr3.2:88114438-88114457 | None:intergenic | 40.0% |
| !! | TATCCTTCCTGATTTGCTTG+TGG | - | chr3.2:88116791-88116810 | None:intergenic | 40.0% |
| !! | TCTCACTGATTCATGTCACT+GGG | + | chr3.2:88114912-88114931 | MS.gene40733:CDS | 40.0% |
| !! | TTTCATCGATTTGTTGCCAC+TGG | + | chr3.2:88115114-88115133 | MS.gene40733:CDS | 40.0% |
| !! | TTTTGGGTGACTAAGCAAGT+GGG | + | chr3.2:88115713-88115732 | MS.gene40733:intron | 40.0% |
| !!! | GCTTTTGGTTTGAAATCTCC+TGG | + | chr3.2:88113794-88113813 | MS.gene40733:CDS | 40.0% |
| AACTCGCAGGTTGCAACAAA+TGG | + | chr3.2:88117186-88117205 | MS.gene40733:CDS | 45.0% | |
| AACTTCTACGGCTGCTAGTA+AGG | + | chr3.2:88113763-88113782 | MS.gene40733:CDS | 45.0% | |
| AAGAAGACCTGGGGAATACT+TGG | + | chr3.2:88115048-88115067 | MS.gene40733:CDS | 45.0% | |
| AATGCAGCAACTCAAGGCTT+CGG | + | chr3.2:88114651-88114670 | MS.gene40733:CDS | 45.0% | |
| ACACCACACTGTACATGCAT+TGG | - | chr3.2:88114003-88114022 | None:intergenic | 45.0% | |
| ACAGAAGCTCCAAATCCATC+TGG | - | chr3.2:88115140-88115159 | None:intergenic | 45.0% | |
| ACTCAAGAGATGGCATCCTT+TGG | + | chr3.2:88116138-88116157 | MS.gene40733:CDS | 45.0% | |
| ACTCGCAGGTTGCAACAAAT+GGG | + | chr3.2:88117187-88117206 | MS.gene40733:CDS | 45.0% | |
| ACTCGTTTCCATAGCATGCA+TGG | - | chr3.2:88116189-88116208 | None:intergenic | 45.0% | |
| AGAACTACGAAGAACCTGCA+TGG | - | chr3.2:88114857-88114876 | None:intergenic | 45.0% | |
| AGCGGCTAAGATATTGCTTG+AGG | + | chr3.2:88115353-88115372 | MS.gene40733:CDS | 45.0% | |
| AGGAATTCAGCAGCTATGTG+AGG | + | chr3.2:88117395-88117414 | MS.gene40733:CDS | 45.0% | |
| AGGTTTATCATCTCCTGCGA+TGG | + | chr3.2:88115539-88115558 | MS.gene40733:intron | 45.0% | |
| AGTCCACAAGCAAATCAGGA+AGG | + | chr3.2:88116785-88116804 | MS.gene40733:CDS | 45.0% | |
| AGTTGCTGCATTAGCTCAAG+TGG | - | chr3.2:88114643-88114662 | None:intergenic | 45.0% | |
| ATAAGCTCCCCAACCGTTAA+CGG | - | chr3.2:88113887-88113906 | None:intergenic | 45.0% | |
| ATCACTTCAGGAAGCAATGC+AGG | - | chr3.2:88116893-88116912 | None:intergenic | 45.0% | |
| ATGGGATTCCTCTGAATCTC+CGG | + | chr3.2:88114938-88114957 | MS.gene40733:CDS | 45.0% | |
| ATTCATGTCACTGGGCAGAT+GGG | + | chr3.2:88114920-88114939 | MS.gene40733:CDS | 45.0% | |
| ATTGCACCTTCTGCTTCGTA+AGG | - | chr3.2:88116367-88116386 | None:intergenic | 45.0% | |
| CAGGATTGATCCGTTTCTTC+AGG | + | chr3.2:88117497-88117516 | MS.gene40733:CDS | 45.0% | |
| CATCCTTTGCAAGAATGGCA+AGG | - | chr3.2:88116075-88116094 | None:intergenic | 45.0% | |
| CATGGACTCGTTATTCTTCC+CGG | - | chr3.2:88114839-88114858 | None:intergenic | 45.0% | |
| CCAGAACATCAAATTCACCC+AGG | - | chr3.2:88117269-88117288 | None:intergenic | 45.0% | |
| CCTGGGTGAATTTGATGTTC+TGG | + | chr3.2:88117266-88117285 | MS.gene40733:CDS | 45.0% | |
| CGCAGAACTTCAACAGAAGA+TGG | - | chr3.2:88116818-88116837 | None:intergenic | 45.0% | |
| CGCTCAAGTTCCTGAAGAAA+CGG | - | chr3.2:88117510-88117529 | None:intergenic | 45.0% | |
| CTCTTCTTAGAACCAGAACC+AGG | - | chr3.2:88113815-88113834 | None:intergenic | 45.0% | |
| CTGAAGAAACGGATCAATCC+TGG | - | chr3.2:88117499-88117518 | None:intergenic | 45.0% | |
| CTGAATTCCTTCAAGACACG+CGG | - | chr3.2:88117385-88117404 | None:intergenic | 45.0% | |
| CTTTGCAAGAATGGCAAGGA+GGG | - | chr3.2:88116071-88116090 | None:intergenic | 45.0% | |
| GAAGAATAACGAGTCCATGC+AGG | + | chr3.2:88114840-88114859 | MS.gene40733:CDS | 45.0% | |
| GAAGATCTCGTAGGCAGTTA+AGG | - | chr3.2:88113615-88113634 | None:intergenic | 45.0% | |
| GAAGCTGAAAGAATGCATCC+AGG | - | chr3.2:88116856-88116875 | None:intergenic | 45.0% | |
| GATAGCTGTTGAGGATTCAG+TGG | + | chr3.2:88116300-88116319 | MS.gene40733:CDS | 45.0% | |
| GATTCAGTGGACAGTGATGA+TGG | + | chr3.2:88116313-88116332 | MS.gene40733:CDS | 45.0% | |
| GCAGAGTTGGACTTATCCAA+AGG | - | chr3.2:88114763-88114782 | None:intergenic | 45.0% | |
| GCCATTCTTGCAAAGGATGT+AGG | + | chr3.2:88116076-88116095 | MS.gene40733:CDS | 45.0% | |
| GCCTACATCCTTTGCAAGAA+TGG | - | chr3.2:88116080-88116099 | None:intergenic | 45.0% | |
| GCCTCATTGAGCAGTTTAGA+CGG | + | chr3.2:88117808-88117827 | MS.gene40733:CDS | 45.0% | |
| GGATCAATCCTGGAAGATGA+GGG | - | chr3.2:88117489-88117508 | None:intergenic | 45.0% | |
| GGATGCCATCTCTTGAGTAT+TGG | - | chr3.2:88116136-88116155 | None:intergenic | 45.0% | |
| GGCTGCTAGTAAGGTTAAGA+AGG | + | chr3.2:88113772-88113791 | MS.gene40733:CDS | 45.0% | |
| GTATTCATCGGAGAGATTGG+TGG | - | chr3.2:88113588-88113607 | None:intergenic | 45.0% | |
| GTTATTCTTCCCGGTTTCGA+TGG | - | chr3.2:88114830-88114849 | None:intergenic | 45.0% | |
| GTTCAATCCAAGTATTCCCC+AGG | - | chr3.2:88115058-88115077 | None:intergenic | 45.0% | |
| GTTTCCATAGCATGCATGGA+GGG | - | chr3.2:88116185-88116204 | None:intergenic | 45.0% | |
| TACGTGGCCAAAGCTAAATC+TGG | + | chr3.2:88116941-88116960 | MS.gene40733:CDS | 45.0% | |
| TATTGGGATGGGCAGAGAAA+AGG | + | chr3.2:88115256-88115275 | MS.gene40733:CDS | 45.0% | |
| TCCGTCTAAACTGCTCAATG+AGG | - | chr3.2:88117812-88117831 | None:intergenic | 45.0% | |
| TCGTTTCAATTTCCCCTGAC+CGG | - | chr3.2:88113864-88113883 | None:intergenic | 45.0% | |
| TCTAAGAAGAGTCCTGGTTC+TGG | + | chr3.2:88113824-88113843 | MS.gene40733:CDS | 45.0% | |
| TCTTCTCTTGGAATGGCCTA+AGG | - | chr3.2:88113477-88113496 | None:intergenic | 45.0% | |
| TCTTGGAATGGCCTAAGGAA+AGG | - | chr3.2:88113472-88113491 | None:intergenic | 45.0% | |
| TGAAACGACCGTTAACGGTT+GGG | + | chr3.2:88113876-88113895 | MS.gene40733:CDS | 45.0% | |
| TGAGCTAATGCAGCAACTCA+AGG | + | chr3.2:88114645-88114664 | MS.gene40733:CDS | 45.0% | |
| TGGAAGAAGGATTGAGTCTG+TGG | + | chr3.2:88114612-88114631 | MS.gene40733:CDS | 45.0% | |
| TTCTCAGAAGAGAAACTCGC+AGG | + | chr3.2:88117173-88117192 | MS.gene40733:CDS | 45.0% | |
| TTGAAACGACCGTTAACGGT+TGG | + | chr3.2:88113875-88113894 | MS.gene40733:CDS | 45.0% | |
| TTGCTTCCTGAAGTGATGCA+TGG | + | chr3.2:88116896-88116915 | MS.gene40733:CDS | 45.0% | |
| TTGGAGTCCACAAGCAAATC+AGG | + | chr3.2:88116781-88116800 | MS.gene40733:CDS | 45.0% | |
| TTTAAGAGCTGCAGACCAGT+TGG | + | chr3.2:88116261-88116280 | MS.gene40733:CDS | 45.0% | |
| TTTGCAAGAATGGCAAGGAG+GGG | - | chr3.2:88116070-88116089 | None:intergenic | 45.0% | |
| ! | ACCACAGCCAGATTTAGCTT+TGG | - | chr3.2:88116951-88116970 | None:intergenic | 45.0% |
| ! | CTTCATTGCAGGTTGGAAGA+AGG | + | chr3.2:88114599-88114618 | MS.gene40733:intron | 45.0% |
| ! | CTTTTGCAACTTCAGCTAGC+TGG | - | chr3.2:88115176-88115195 | None:intergenic | 45.0% |
| ! | GAGGTATTCATCGGAGAGAT+TGG | - | chr3.2:88113591-88113610 | None:intergenic | 45.0% |
| ! | GGTTTGAAATCTCCTGGTTC+TGG | + | chr3.2:88113800-88113819 | MS.gene40733:CDS | 45.0% |
| !! | AAGGAGCTGTTTTGGGCAAA+TGG | + | chr3.2:88117702-88117721 | MS.gene40733:CDS | 45.0% |
| !! | AGGAGCTGTTTTGGGCAAAT+GGG | + | chr3.2:88117703-88117722 | MS.gene40733:CDS | 45.0% |
| !! | ATGGAGGGCATTGTCTCTTT+AGG | + | chr3.2:88115324-88115343 | MS.gene40733:CDS | 45.0% |
| !! | CTCTCACTGATTCATGTCAC+TGG | + | chr3.2:88114911-88114930 | MS.gene40733:CDS | 45.0% |
| !! | TCTGGTTCTAAGAAGAGTCC+TGG | + | chr3.2:88113818-88113837 | MS.gene40733:CDS | 45.0% |
| !! | TGGAGGGCATTGTCTCTTTA+GGG | + | chr3.2:88115325-88115344 | MS.gene40733:CDS | 45.0% |
| AAAGGGGAAGGATAGACCTC+AGG | - | chr3.2:88117770-88117789 | None:intergenic | 50.0% | |
| AAGGGGAAGGATAGACCTCA+GGG | - | chr3.2:88117769-88117788 | None:intergenic | 50.0% | |
| ACAGGTTTGCAACTACCCTG+AGG | + | chr3.2:88117751-88117770 | MS.gene40733:CDS | 50.0% | |
| ACCAGAAGAGGTTCGACATG+CGG | - | chr3.2:88113642-88113661 | None:intergenic | 50.0% | |
| ACTGAGAGGCTTACCAGAAG+AGG | - | chr3.2:88113654-88113673 | None:intergenic | 50.0% | |
| AGAAAGCAGACTCAAGCAGG+AGG | + | chr3.2:88116017-88116036 | MS.gene40733:CDS | 50.0% | |
| ATAGTGCATCTCGTCAGTGC+CGG | - | chr3.2:88117105-88117124 | None:intergenic | 50.0% | |
| ATGCCTCCTTACGAAGCAGA+AGG | + | chr3.2:88116358-88116377 | MS.gene40733:CDS | 50.0% | |
| ATGGCAGAAGAGGACTCTCA+AGG | + | chr3.2:88114702-88114721 | MS.gene40733:CDS | 50.0% | |
| CCTCAACAGCTATCTGCACA+AGG | - | chr3.2:88116294-88116313 | None:intergenic | 50.0% | |
| CCTCCTTGCCATTCTTGCAA+AGG | + | chr3.2:88116069-88116088 | MS.gene40733:CDS | 50.0% | |
| CCTTGTGCAGATAGCTGTTG+AGG | + | chr3.2:88116291-88116310 | MS.gene40733:CDS | 50.0% | |
| CCTTTGCAAGAATGGCAAGG+AGG | - | chr3.2:88116072-88116091 | None:intergenic | 50.0% | |
| CGGATCAATCCTGGAAGATG+AGG | - | chr3.2:88117490-88117509 | None:intergenic | 50.0% | |
| CGTTTCCATAGCATGCATGG+AGG | - | chr3.2:88116186-88116205 | None:intergenic | 50.0% | |
| CTCAATGAGGCTCTCTGTGT+CGG | - | chr3.2:88117799-88117818 | None:intergenic | 50.0% | |
| CTCGCAGGTTGCAACAAATG+GGG | + | chr3.2:88117188-88117207 | MS.gene40733:CDS | 50.0% | |
| GAAACGACCGTTAACGGTTG+GGG | + | chr3.2:88113877-88113896 | MS.gene40733:CDS | 50.0% | |
| GAAAGCAGACTCAAGCAGGA+GGG | + | chr3.2:88116018-88116037 | MS.gene40733:CDS | 50.0% | |
| GAAAGTTGACCGAGTGGAGA+AGG | - | chr3.2:88113566-88113585 | None:intergenic | 50.0% | |
| GAAGAGGACTCTCAAGGTTC+TGG | + | chr3.2:88114708-88114727 | MS.gene40733:CDS | 50.0% | |
| GACGATCTTCCTTCTCCACT+CGG | + | chr3.2:88113554-88113573 | MS.gene40733:CDS | 50.0% | |
| GAGCTTCTGTCTGATGCTGA+TGG | + | chr3.2:88115150-88115169 | MS.gene40733:CDS | 50.0% | |
| GAGTGGAGAAGGAAGATCGT+CGG | - | chr3.2:88113555-88113574 | None:intergenic | 50.0% | |
| GATTCATGTCACTGGGCAGA+TGG | + | chr3.2:88114919-88114938 | MS.gene40733:CDS | 50.0% | |
| GCACAAGGTCTTTCTCCAAC+TGG | - | chr3.2:88116279-88116298 | None:intergenic | 50.0% | |
| GCCAAAGCTAAATCTGGCTG+TGG | + | chr3.2:88116947-88116966 | MS.gene40733:CDS | 50.0% | |
| GCGTTGCTCAGAATTTCTGC+TGG | + | chr3.2:88113956-88113975 | MS.gene40733:CDS | 50.0% | |
| GCTCAGAATTTCTGCTGGAC+AGG | + | chr3.2:88113961-88113980 | MS.gene40733:CDS | 50.0% | |
| GGAAGCAATGCAGGATGCAT+TGG | - | chr3.2:88116884-88116903 | None:intergenic | 50.0% | |
| TAACGGTTGGGGAGCTTATG+AGG | + | chr3.2:88113888-88113907 | MS.gene40733:CDS | 50.0% | |
| TCTACGCCATGCATCACTTC+AGG | - | chr3.2:88116905-88116924 | None:intergenic | 50.0% | |
| TCTCGTAGGCAGTTAAGGTG+AGG | - | chr3.2:88113610-88113629 | None:intergenic | 50.0% | |
| TGCTTGTGGACTCCAAAGCT+AGG | - | chr3.2:88116777-88116796 | None:intergenic | 50.0% | |
| TGGAGAAAGCAGACTCAAGC+AGG | + | chr3.2:88116014-88116033 | MS.gene40733:CDS | 50.0% | |
| TGTCCGGAAGTTGGAGGTAA+TGG | - | chr3.2:88117876-88117895 | None:intergenic | 50.0% | |
| TTGCAAGAATGGCAAGGAGG+GGG | - | chr3.2:88116069-88116088 | None:intergenic | 50.0% | |
| TTGGAGATCCCTCATCTTCC+AGG | + | chr3.2:88117478-88117497 | MS.gene40733:CDS | 50.0% | |
| TTGGATAGGCCCATCGAAAC+CGG | + | chr3.2:88114817-88114836 | MS.gene40733:CDS | 50.0% | |
| TTGGTGGAAAGTTGACCGAG+TGG | - | chr3.2:88113572-88113591 | None:intergenic | 50.0% | |
| ! | ATTTGTTGCCACTGGCCAGA+TGG | + | chr3.2:88115122-88115141 | MS.gene40733:CDS | 50.0% |
| ! | CTCTGTGTCGGTCCTGAAAA+GGG | - | chr3.2:88117787-88117806 | None:intergenic | 50.0% |
| ! | GCACTGACGAGATGCACTAT+TGG | + | chr3.2:88117105-88117124 | MS.gene40733:CDS | 50.0% |
| ! | GGTCTATCCTTCCCCTTTTC+AGG | + | chr3.2:88117772-88117791 | MS.gene40733:CDS | 50.0% |
| ! | TCTCTGTGTCGGTCCTGAAA+AGG | - | chr3.2:88117788-88117807 | None:intergenic | 50.0% |
| ! | TCTGTGTCGGTCCTGAAAAG+GGG | - | chr3.2:88117786-88117805 | None:intergenic | 50.0% |
| ! | TGTCTCTTTAGGGGTAGCAG+CGG | + | chr3.2:88115335-88115354 | MS.gene40733:CDS | 50.0% |
| !! | CTGTTTTGGGCAAATGGGGA+CGG | + | chr3.2:88117708-88117727 | MS.gene40733:CDS | 50.0% |
| !! | GATGAGGGTTTCTGAAGCCA+TGG | + | chr3.2:88113916-88113935 | MS.gene40733:CDS | 50.0% |
| !! | GGAGCTGTTTTGGGCAAATG+GGG | + | chr3.2:88117704-88117723 | MS.gene40733:CDS | 50.0% |
| !! | GGAGGGCATTGTCTCTTTAG+GGG | + | chr3.2:88115326-88115345 | MS.gene40733:CDS | 50.0% |
| !! | TCAGTGGACAGTGATGATGG+TGG | + | chr3.2:88116316-88116335 | MS.gene40733:CDS | 50.0% |
| !! | TCTACGTACTGCTTTTGCCC+AGG | + | chr3.2:88115458-88115477 | MS.gene40733:CDS | 50.0% |
| ACAGCAAGACCTGCTGCCAA+AGG | - | chr3.2:88116157-88116176 | None:intergenic | 55.0% | |
| ACCTCCAACTTCCGGACAGT+GGG | + | chr3.2:88117878-88117897 | MS.gene40733:CDS | 55.0% | |
| ACGTCTCACACGCGAATCCA+TGG | - | chr3.2:88113936-88113955 | None:intergenic | 55.0% | |
| AGATGGCATCCTTTGGCAGC+AGG | + | chr3.2:88116145-88116164 | MS.gene40733:CDS | 55.0% | |
| ATCAGATGGACCCCACTGTC+CGG | - | chr3.2:88117892-88117911 | None:intergenic | 55.0% | |
| ATTCCTTCAAGACACGCGGC+TGG | - | chr3.2:88117381-88117400 | None:intergenic | 55.0% | |
| CAATTTCCCCTGACCGGAAC+CGG | - | chr3.2:88113858-88113877 | None:intergenic | 55.0% | |
| CTCCAAATCCATCTGGCCAG+TGG | - | chr3.2:88115133-88115152 | None:intergenic | 55.0% | |
| GCACCTTCTGCTTCGTAAGG+AGG | - | chr3.2:88116364-88116383 | None:intergenic | 55.0% | |
| GCTACCCTCCATGCATGCTA+TGG | + | chr3.2:88116178-88116197 | MS.gene40733:CDS | 55.0% | |
| GCTATTGCACGGATGCACCT+AGG | - | chr3.2:88115851-88115870 | None:intergenic | 55.0% | |
| TACCTCCAACTTCCGGACAG+TGG | + | chr3.2:88117877-88117896 | MS.gene40733:CDS | 55.0% | |
| TGCAAAGGATGTAGGCAGCC+TGG | + | chr3.2:88116084-88116103 | MS.gene40733:CDS | 55.0% | |
| TGGAGAAGGAAGATCGTCGG+CGG | - | chr3.2:88113552-88113571 | None:intergenic | 55.0% | |
| TGGATAGGCCCATCGAAACC+GGG | + | chr3.2:88114818-88114837 | MS.gene40733:CDS | 55.0% | |
| TGTCGGTCCTGAAAAGGGGA+AGG | - | chr3.2:88117782-88117801 | None:intergenic | 55.0% | |
| TTCCGGGAAAAAGCCCGAGA+GGG | - | chr3.2:88117645-88117664 | None:intergenic | 55.0% | |
| TTTGGCAGCAGGTCTTGCTG+TGG | + | chr3.2:88116156-88116175 | MS.gene40733:CDS | 55.0% | |
| ! | GAGGACTCTCAAGGTTCTGG+AGG | + | chr3.2:88114711-88114730 | MS.gene40733:CDS | 55.0% |
| ! | TGCCACTGGCCAGATGGATT+TGG | + | chr3.2:88115128-88115147 | MS.gene40733:CDS | 55.0% |
| !! | ACTCTCAAGGTTCTGGAGGC+TGG | + | chr3.2:88114715-88114734 | MS.gene40733:CDS | 55.0% |
| !! | CCTGGTTCTGGTTCTGCTTC+CGG | + | chr3.2:88113836-88113855 | MS.gene40733:CDS | 55.0% |
| !! | TCTGGTTCTGCTTCCGGTTC+CGG | + | chr3.2:88113842-88113861 | MS.gene40733:CDS | 55.0% |
| AGTCCAACTCTGCTGCGCAG+CGG | + | chr3.2:88114770-88114789 | MS.gene40733:CDS | 60.0% | |
| CCGGAAGCAGAACCAGAACC+AGG | - | chr3.2:88113839-88113858 | None:intergenic | 60.0% | |
| CCTCCAACTTCCGGACAGTG+GGG | + | chr3.2:88117879-88117898 | MS.gene40733:CDS | 60.0% | |
| CTTCCGGGAAAAAGCCCGAG+AGG | - | chr3.2:88117646-88117665 | None:intergenic | 60.0% | |
| GAAGGAAGATCGTCGGCGGT+AGG | - | chr3.2:88113548-88113567 | None:intergenic | 60.0% | |
| GCCGCATGTCGAACCTCTTC+TGG | + | chr3.2:88113638-88113657 | MS.gene40733:CDS | 60.0% | |
| TCCGGGAAAAAGCCCGAGAG+GGG | - | chr3.2:88117644-88117663 | None:intergenic | 60.0% | |
| TCTCCAGCCGCGTGTCTTGA+AGG | + | chr3.2:88117375-88117394 | MS.gene40733:CDS | 60.0% | |
| TCTGCTTCCGGTTCCGGTCA+GGG | + | chr3.2:88113848-88113867 | MS.gene40733:CDS | 60.0% | |
| TGCGGCGACGAAGATCTCGT+AGG | - | chr3.2:88113624-88113643 | None:intergenic | 60.0% | |
| TTCTGCTTCCGGTTCCGGTC+AGG | + | chr3.2:88113847-88113866 | MS.gene40733:CDS | 60.0% | |
| ! | CCAAGCGGCGAGTTCTGACT+CGG | - | chr3.2:88113728-88113747 | None:intergenic | 60.0% |
| !! | CTCGTCAGTGCCGGCATTGT+TGG | - | chr3.2:88117096-88117115 | None:intergenic | 60.0% |
| !! | CTCTCGGGCTTTTTCCCGGA+AGG | + | chr3.2:88117644-88117663 | MS.gene40733:CDS | 60.0% |
| !! | GCAAGGAGGGGGAGAGCATT+TGG | - | chr3.2:88116058-88116077 | None:intergenic | 60.0% |
| CCCCACTGTCCGGAAGTTGG+AGG | - | chr3.2:88117882-88117901 | None:intergenic | 65.0% | |
| CCGAGTCAGAACTCGCCGCT+TGG | + | chr3.2:88113725-88113744 | MS.gene40733:CDS | 65.0% | |
| CTGCTTCCGGTTCCGGTCAG+GGG | + | chr3.2:88113849-88113868 | MS.gene40733:CDS | 65.0% | |
| GGAAGATCGTCGGCGGTAGG+CGG | - | chr3.2:88113545-88113564 | None:intergenic | 65.0% | |
| GGACCCCACTGTCCGGAAGT+TGG | - | chr3.2:88117885-88117904 | None:intergenic | 65.0% | |
| ! | TGCTTGCTGGAGGCCCCTCT+CGG | + | chr3.2:88117628-88117647 | MS.gene40733:CDS | 65.0% |
| !! | GCCCCTCTCGGGCTTTTTCC+CGG | + | chr3.2:88117640-88117659 | MS.gene40733:CDS | 65.0% |
| !! | GGAGGGGGAGAGCATTTGGC+TGG | - | chr3.2:88116054-88116073 | None:intergenic | 65.0% |
| ACTCTGCTGCGCAGCGGCTG+CGG | + | chr3.2:88114776-88114795 | MS.gene40733:CDS | 70.0% | |
| AGATCGTCGGCGGTAGGCGG+TGG | - | chr3.2:88113542-88113561 | None:intergenic | 70.0% | |
| CAGCCGCTGCGCAGCAGAGT+TGG | - | chr3.2:88114776-88114795 | None:intergenic | 70.0% | |
| ! | GCTTGCTGGAGGCCCCTCTC+GGG | + | chr3.2:88117629-88117648 | MS.gene40733:CDS | 70.0% |
| TCGTCGGCGGTAGGCGGTGG+TGG | - | chr3.2:88113539-88113558 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 88113446 | 88118004 | 88113446 | ID=MS.gene40733 |
| chr3.2 | mRNA | 88113446 | 88118004 | 88113446 | ID=MS.gene40733.t1;Parent=MS.gene40733 |
| chr3.2 | exon | 88113446 | 88113982 | 88113446 | ID=MS.gene40733.t1.exon1;Parent=MS.gene40733.t1 |
| chr3.2 | CDS | 88113446 | 88113982 | 88113446 | ID=cds.MS.gene40733.t1;Parent=MS.gene40733.t1 |
| chr3.2 | exon | 88114610 | 88115479 | 88114610 | ID=MS.gene40733.t1.exon2;Parent=MS.gene40733.t1 |
| chr3.2 | CDS | 88114610 | 88115479 | 88114610 | ID=cds.MS.gene40733.t1;Parent=MS.gene40733.t1 |
| chr3.2 | exon | 88116010 | 88116465 | 88116010 | ID=MS.gene40733.t1.exon3;Parent=MS.gene40733.t1 |
| chr3.2 | CDS | 88116010 | 88116465 | 88116010 | ID=cds.MS.gene40733.t1;Parent=MS.gene40733.t1 |
| chr3.2 | exon | 88116779 | 88116968 | 88116779 | ID=MS.gene40733.t1.exon4;Parent=MS.gene40733.t1 |
| chr3.2 | CDS | 88116779 | 88116968 | 88116779 | ID=cds.MS.gene40733.t1;Parent=MS.gene40733.t1 |
| chr3.2 | exon | 88117073 | 88118004 | 88117073 | ID=MS.gene40733.t1.exon5;Parent=MS.gene40733.t1 |
| chr3.2 | CDS | 88117073 | 88118004 | 88117073 | ID=cds.MS.gene40733.t1;Parent=MS.gene40733.t1 |
| Gene Sequence |
| Protein sequence |
