Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41196.t1 | XP_013456085.1 | 96.1 | 484 | 19 | 0 | 1 | 484 | 1 | 484 | 1.40E-266 | 928.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41196.t1 | Q10137 | 27.0 | 267 | 171 | 7 | 155 | 400 | 2 | 265 | 7.7e-11 | 70.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41196.t1 | A0A072UL27 | 96.1 | 484 | 19 | 0 | 1 | 484 | 1 | 484 | 1.0e-266 | 928.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052609 | MS.gene41196 | 0.800337 | 1.51E-48 | -1.69E-46 |
| MS.gene052775 | MS.gene41196 | 0.801966 | 7.02E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41196.t1 | MTR_4g063605 | 96.074 | 484 | 19 | 0 | 1 | 484 | 1 | 484 | 0.0 | 970 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41196.t1 | AT3G46450 | 50.513 | 487 | 230 | 5 | 1 | 482 | 1 | 481 | 2.15e-162 | 469 |
| MS.gene41196.t1 | AT3G46450 | 50.513 | 487 | 230 | 5 | 1 | 482 | 1 | 481 | 2.15e-162 | 469 |
| MS.gene41196.t1 | AT3G46450 | 49.697 | 495 | 230 | 6 | 1 | 482 | 1 | 489 | 2.30e-159 | 461 |
Find 117 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATAAGTATTATCGTATTT+TGG | 0.089032 | 4.1:+36992160 | MS.gene41196:CDS |
| CACAAAACCAAATACCTTTC+TGG | 0.191441 | 4.1:-36990188 | None:intergenic |
| TTGCCTACCCACCATTTAAA+TGG | 0.217975 | 4.1:+36987322 | MS.gene41196:CDS |
| ATGTGTGAATTGTTCTAAAA+TGG | 0.228006 | 4.1:+36991969 | MS.gene41196:CDS |
| TTCAAAAGTGGGCTGTGTTC+AGG | 0.251395 | 4.1:+36987346 | MS.gene41196:CDS |
| TCAGTATCACAGGTAGAATA+TGG | 0.282203 | 4.1:+36991360 | MS.gene41196:intron |
| TTGTGTCTGGCAAGGTCTGC+AGG | 0.284744 | 4.1:+36987287 | MS.gene41196:CDS |
| CCAGCAGCAGCAGAATTGTT+AGG | 0.345640 | 4.1:+36992028 | MS.gene41196:CDS |
| ATATCTTTGTGCAAAGCCTT+TGG | 0.349948 | 4.1:-36987139 | None:intergenic |
| AGAGTGCAACCTCATGAAAC+TGG | 0.353698 | 4.1:+36992003 | MS.gene41196:CDS |
| GTGGGCTGTGTTCAGGGGTT+TGG | 0.370104 | 4.1:+36987353 | MS.gene41196:CDS |
| GCAATGGAAAGAACTAATAA+TGG | 0.372345 | 4.1:-36987974 | None:intergenic |
| GAGCAAATCGAGGTTTATCT+TGG | 0.375243 | 4.1:-36991180 | None:intergenic |
| TATCTTTGTGCAAAGCCTTT+GGG | 0.386982 | 4.1:-36987138 | None:intergenic |
| ACTACGTCTACATCCAACTA+TGG | 0.397066 | 4.1:+36992086 | MS.gene41196:CDS |
| CCCTGTCTCATTGTAAGGCT+TGG | 0.403991 | 4.1:+36991133 | MS.gene41196:CDS |
| TGTGGTCAAATATGGTGTTC+TGG | 0.416093 | 4.1:+36991086 | MS.gene41196:CDS |
| AGATTACCTGAAGAAAAGTC+TGG | 0.416322 | 4.1:-36991569 | None:intergenic |
| AGAGTAGATGCCCTTGTGTC+TGG | 0.419220 | 4.1:+36987274 | MS.gene41196:CDS |
| ACAGACCCTGTCTCATTGTA+AGG | 0.420449 | 4.1:+36991128 | MS.gene41196:CDS |
| ATCTTGCAGAATGGAAGAAC+AGG | 0.423646 | 4.1:-36991481 | None:intergenic |
| GGTCATAGTTGTTGCTTTGA+CGG | 0.427086 | 4.1:-36992119 | None:intergenic |
| GTTGTCATAGCTCTTGGTGC+TGG | 0.427292 | 4.1:+36992183 | MS.gene41196:CDS |
| TGCTGAACCGGCTCCTGTGC+AGG | 0.432616 | 4.1:+36988075 | MS.gene41196:CDS |
| TTCAGAAATATCTGCTGAAC+CGG | 0.436907 | 4.1:+36988063 | MS.gene41196:CDS |
| TCAACACTGCCATCATATCT+TGG | 0.436939 | 4.1:+36991934 | MS.gene41196:CDS |
| GCAATAACACGAGCAATTGC+TGG | 0.437422 | 4.1:-36991546 | None:intergenic |
| GCTGGAAATGTGGTCAAATA+TGG | 0.437920 | 4.1:+36991078 | MS.gene41196:CDS |
| TCAAAAGTGGGCTGTGTTCA+GGG | 0.438998 | 4.1:+36987347 | MS.gene41196:CDS |
| CCTAACAATTCTGCTGCTGC+TGG | 0.448203 | 4.1:-36992028 | None:intergenic |
| AACAAACAACCAAGACGATT+AGG | 0.448537 | 4.1:-36991510 | None:intergenic |
| CCTGTCTCATTGTAAGGCTT+GGG | 0.451557 | 4.1:+36991134 | MS.gene41196:CDS |
| CCCTCAAATTACAGTATTGG+TGG | 0.455195 | 4.1:+36991410 | MS.gene41196:CDS |
| CAGTATCACAGGTAGAATAT+GGG | 0.455947 | 4.1:+36991361 | MS.gene41196:intron |
| AAGGGATTAGTTTGCCAGAA+AGG | 0.456937 | 4.1:+36990174 | MS.gene41196:CDS |
| GACTTTGGAAGCAGTGCTGT+GGG | 0.461131 | 4.1:+36987192 | MS.gene41196:CDS |
| TAAAACTTCAGGAGCTCTCT+CGG | 0.463316 | 4.1:-36990105 | None:intergenic |
| AATTCTTTCAGTAGAAGAGC+TGG | 0.470395 | 4.1:+36991060 | MS.gene41196:CDS |
| TGCAGGATAATTTGAATACT+AGG | 0.474906 | 4.1:+36988092 | MS.gene41196:CDS |
| CCCAAGCCTTACAATGAGAC+AGG | 0.475196 | 4.1:-36991134 | None:intergenic |
| CATTTAAATGGATTCAAAAG+TGG | 0.478870 | 4.1:+36987334 | MS.gene41196:CDS |
| AAATTATCCTGCACAGGAGC+CGG | 0.479392 | 4.1:-36988082 | None:intergenic |
| CCACCAATACTGTAATTTGA+GGG | 0.482481 | 4.1:-36991410 | None:intergenic |
| CGGTCATCTAATACCATAGT+TGG | 0.485418 | 4.1:-36992099 | None:intergenic |
| TTGCTGCTTTAGAAGCTGTA+AGG | 0.485821 | 4.1:+36987241 | MS.gene41196:CDS |
| TCCACCAATACTGTAATTTG+AGG | 0.487804 | 4.1:-36991411 | None:intergenic |
| AAACCCTCAAATTACAGTAT+TGG | 0.490708 | 4.1:+36991407 | MS.gene41196:CDS |
| AACGAAGAGCTGGAAAATCA+AGG | 0.492588 | 4.1:+36990155 | MS.gene41196:CDS |
| GCGTATTGTCTTCTTGATTG+AGG | 0.494104 | 4.1:-36991020 | None:intergenic |
| AAACAAAACAGTGCTATCAC+TGG | 0.494792 | 4.1:+36987078 | MS.gene41196:CDS |
| GATCACTTTCCTAATCGTCT+TGG | 0.495856 | 4.1:+36991501 | MS.gene41196:CDS |
| TGTGTGAATTGTTCTAAAAT+GGG | 0.496722 | 4.1:+36991970 | MS.gene41196:CDS |
| CAGCAGCAGCAGAATTGTTA+GGG | 0.497606 | 4.1:+36992029 | MS.gene41196:CDS |
| TGTGTCTGGCAAGGTCTGCA+GGG | 0.502343 | 4.1:+36987288 | MS.gene41196:CDS |
| ATTTGCATGGGAATTCTCAA+TGG | 0.503124 | 4.1:-36991450 | None:intergenic |
| GACTCAACTCAACGAAGAGC+TGG | 0.511333 | 4.1:+36990145 | MS.gene41196:CDS |
| ATTTAAATGGATTCAAAAGT+GGG | 0.513377 | 4.1:+36987335 | MS.gene41196:CDS |
| GATCTTTGCTTCAGTATCAC+AGG | 0.515027 | 4.1:+36991350 | MS.gene41196:intron |
| AGCAAATCGAGGTTTATCTT+GGG | 0.515766 | 4.1:-36991179 | None:intergenic |
| AAAACTTCAGGAGCTCTCTC+GGG | 0.516604 | 4.1:-36990104 | None:intergenic |
| CAAGAAGACAATACGCTGGC+GGG | 0.519577 | 4.1:+36991027 | MS.gene41196:CDS |
| TGCAGACCTTGCCAGACACA+AGG | 0.523801 | 4.1:-36987285 | None:intergenic |
| CACCATGCGTCAATGAAACA+AGG | 0.525789 | 4.1:-36987170 | None:intergenic |
| AGATAAACCTCGATTTGCTC+AGG | 0.528310 | 4.1:+36991183 | MS.gene41196:CDS |
| ATTTAAATGGTGGGTAGGCA+AGG | 0.528331 | 4.1:-36987320 | None:intergenic |
| AACAGCCTTTACTGATGCAC+TGG | 0.530440 | 4.1:+36987997 | MS.gene41196:CDS |
| TTGTCTTCTTGATTGAGGTA+AGG | 0.532061 | 4.1:-36991015 | None:intergenic |
| AATCCATTTAAATGGTGGGT+AGG | 0.532716 | 4.1:-36987325 | None:intergenic |
| TTTGAATCCATTTAAATGGT+GGG | 0.533081 | 4.1:-36987329 | None:intergenic |
| TCAAATATGGTGTTCTGGCA+TGG | 0.535129 | 4.1:+36991091 | MS.gene41196:CDS |
| ACATTCCAGTGCATCAGTAA+AGG | 0.536622 | 4.1:-36988002 | None:intergenic |
| TCATTGACGCATGGTGACTT+TGG | 0.537854 | 4.1:+36987177 | MS.gene41196:CDS |
| GTATTCAAATTATCCTGCAC+AGG | 0.542724 | 4.1:-36988088 | None:intergenic |
| CTTCGGTTTATATGGGAGAG+AGG | 0.544472 | 4.1:+36987019 | None:intergenic |
| ACAGGATCTCAGTATTTGCA+TGG | 0.546008 | 4.1:-36991463 | None:intergenic |
| GGGTTTGGTTAAAAGCATGC+AGG | 0.548426 | 4.1:+36987368 | MS.gene41196:CDS |
| CTGCTGGTCCCAGTTTCATG+AGG | 0.549096 | 4.1:-36992012 | None:intergenic |
| CAAAAGTGGGCTGTGTTCAG+GGG | 0.551310 | 4.1:+36987348 | MS.gene41196:CDS |
| CTGGTTGCGTCGCGTCCCAA+AGG | 0.563821 | 4.1:+36987123 | MS.gene41196:CDS |
| CAGCTGCCTCCAAGATATGA+TGG | 0.565306 | 4.1:-36991943 | None:intergenic |
| AGATGCCCTTGTGTCTGGCA+AGG | 0.565370 | 4.1:+36987279 | MS.gene41196:CDS |
| TTCGGTTTATATGGGAGAGA+GGG | 0.566140 | 4.1:+36987020 | None:intergenic |
| ATCAGTAAAGGCTGTTGCAA+TGG | 0.567300 | 4.1:-36987990 | None:intergenic |
| TGACTTTGGAAGCAGTGCTG+TGG | 0.568986 | 4.1:+36987191 | MS.gene41196:CDS |
| GGTTTATATGGGAGAGAGGG+TGG | 0.571830 | 4.1:+36987023 | None:intergenic |
| ACGAAGAGCTGGAAAATCAA+GGG | 0.572330 | 4.1:+36990156 | MS.gene41196:CDS |
| CCCCTTGTTTCATTGACGCA+TGG | 0.577087 | 4.1:+36987168 | MS.gene41196:CDS |
| AGGAAAGTGATCTTGCAGAA+TGG | 0.579301 | 4.1:-36991490 | None:intergenic |
| ACACTGCCATCATATCTTGG+AGG | 0.583075 | 4.1:+36991937 | MS.gene41196:CDS |
| ACAGTATTGGTGGACTGTGA+AGG | 0.583388 | 4.1:+36991420 | MS.gene41196:CDS |
| TGGGATAGCTTGCAGCACAT+TGG | 0.587085 | 4.1:+36991153 | MS.gene41196:CDS |
| GATTACCTGAAGAAAAGTCT+GGG | 0.589318 | 4.1:-36991568 | None:intergenic |
| TTTGGCCAATCTTACACACC+AGG | 0.590862 | 4.1:-36992216 | None:intergenic |
| AACAAAACAGTGCTATCACT+GGG | 0.597539 | 4.1:+36987079 | MS.gene41196:CDS |
| TAGAAGCTGTGTAAAATCTG+TGG | 0.605768 | 4.1:-36990973 | None:intergenic |
| CAGGATCTCAGTATTTGCAT+GGG | 0.606115 | 4.1:-36991462 | None:intergenic |
| AGAATTAGTAATATGATCTG+AGG | 0.616840 | 4.1:-36988035 | None:intergenic |
| TGACAGCGGTTCTCAACACC+TGG | 0.616965 | 4.1:-36992140 | None:intergenic |
| CAGTAGAAGAGCTGGAAATG+TGG | 0.618720 | 4.1:+36991068 | MS.gene41196:CDS |
| GAGTGCAACCTCATGAAACT+GGG | 0.622128 | 4.1:+36992004 | MS.gene41196:CDS |
| CCAAGCCTTACAATGAGACA+GGG | 0.623318 | 4.1:-36991133 | None:intergenic |
| GTTGGATGTAGACGTAGTGA+TGG | 0.623773 | 4.1:-36992081 | None:intergenic |
| AGTATCACAGGTAGAATATG+GGG | 0.625550 | 4.1:+36991362 | MS.gene41196:intron |
| GGTGCTGGAGTATACGAACC+TGG | 0.628612 | 4.1:+36992198 | MS.gene41196:CDS |
| GCAGACCTTGCCAGACACAA+GGG | 0.633261 | 4.1:-36987284 | None:intergenic |
| CTAATTGCCTGAGCAAATCG+AGG | 0.635399 | 4.1:-36991190 | None:intergenic |
| ACCATGCGTCAATGAAACAA+GGG | 0.635590 | 4.1:-36987169 | None:intergenic |
| CAGCAGCAGAATTGTTAGGG+AGG | 0.639469 | 4.1:+36992032 | MS.gene41196:CDS |
| GATGCACTGGAATGTAGTGA+TGG | 0.651523 | 4.1:+36988010 | MS.gene41196:CDS |
| TCAAGAAGACAATACGCTGG+CGG | 0.653895 | 4.1:+36991026 | MS.gene41196:CDS |
| TCAAAGCAACAACTATGACC+AGG | 0.665242 | 4.1:+36992122 | MS.gene41196:CDS |
| ATTGTTCTAAAATGGGCAAG+CGG | 0.677673 | 4.1:+36991977 | MS.gene41196:CDS |
| TACGATAATACTTATGACAG+CGG | 0.678800 | 4.1:-36992154 | None:intergenic |
| CCATGCGTCAATGAAACAAG+GGG | 0.685581 | 4.1:-36987168 | None:intergenic |
| CAATCAAGAAGACAATACGC+TGG | 0.698783 | 4.1:+36991023 | MS.gene41196:CDS |
| ACTTTGGAAGCAGTGCTGTG+GGG | 0.718142 | 4.1:+36987193 | MS.gene41196:CDS |
| GGATGATATCAGTGACAACG+AGG | 0.724876 | 4.1:+36992053 | MS.gene41196:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCATTGAATATTTTTTTTT+GGG | + | chr4.1:36990768-36990787 | MS.gene41196:intron | 10.0% |
| !!! | TATTTACCTTTTTTTTTTTT+TGG | + | chr4.1:36990493-36990512 | MS.gene41196:intron | 10.0% |
| !!! | TTTTTTTTTTTTATCAAGAT+TGG | - | chr4.1:36989430-36989449 | None:intergenic | 10.0% |
| !! | AAAAAAAAGGTAAATATTGT+TGG | - | chr4.1:36990489-36990508 | None:intergenic | 15.0% |
| !! | AAAATTATCATCTTTATGTT+TGG | + | chr4.1:36988455-36988474 | MS.gene41196:intron | 15.0% |
| !! | AACATTAAATAAAATCACTT+AGG | + | chr4.1:36990670-36990689 | MS.gene41196:intron | 15.0% |
| !!! | AAGTTTTAGAATATGAAAAA+TGG | + | chr4.1:36990120-36990139 | MS.gene41196:CDS | 15.0% |
| !!! | AATCATTTTTTAGTTTTTGT+TGG | + | chr4.1:36990298-36990317 | MS.gene41196:intron | 15.0% |
| !!! | ATTTAACAAGTTTTAGAAAT+TGG | + | chr4.1:36987524-36987543 | MS.gene41196:intron | 15.0% |
| !!! | GATCATTGAATATTTTTTTT+TGG | + | chr4.1:36990767-36990786 | MS.gene41196:intron | 15.0% |
| !! | AACTAGAACATAAACAAATA+TGG | - | chr4.1:36989792-36989811 | None:intergenic | 20.0% |
| !! | AAGAAAAAGTTAAAGATAGA+AGG | + | chr4.1:36991877-36991896 | MS.gene41196:CDS | 20.0% |
| !! | AATAGCAAATATGTTAAATG+TGG | - | chr4.1:36988349-36988368 | None:intergenic | 20.0% |
| !! | ACCATTAATTAACAAATCAA+AGG | - | chr4.1:36990555-36990574 | None:intergenic | 20.0% |
| !! | ACTAGAACATAAACAAATAT+GGG | - | chr4.1:36989791-36989810 | None:intergenic | 20.0% |
| !! | AGGCATATATCTAATTTATA+TGG | - | chr4.1:36989648-36989667 | None:intergenic | 20.0% |
| !! | ATAGCAAATATGTTAAATGT+GGG | - | chr4.1:36988348-36988367 | None:intergenic | 20.0% |
| !! | ATATTTACTTGCATATTTCT+TGG | + | chr4.1:36990888-36990907 | MS.gene41196:intron | 20.0% |
| !! | ATTAAAAAGTAAGTGTAGTT+AGG | + | chr4.1:36988830-36988849 | MS.gene41196:intron | 20.0% |
| !! | ATTCAGTTACATAGTAAAAA+TGG | - | chr4.1:36987481-36987500 | None:intergenic | 20.0% |
| !! | GGCATATATCTAATTTATAT+GGG | - | chr4.1:36989647-36989666 | None:intergenic | 20.0% |
| !! | TATGTCAATATATATTCCTT+GGG | + | chr4.1:36989354-36989373 | MS.gene41196:intron | 20.0% |
| !! | TCTATTTCAAACTAATCTAT+TGG | + | chr4.1:36990259-36990278 | MS.gene41196:intron | 20.0% |
| !! | TTATTTACATATGACATTTG+TGG | + | chr4.1:36989278-36989297 | MS.gene41196:intron | 20.0% |
| !!! | AACATATTTTCAGTTCTAAT+AGG | + | chr4.1:36988400-36988419 | MS.gene41196:intron | 20.0% |
| !!! | AATGCAATTTTAATTATCCT+AGG | + | chr4.1:36991732-36991751 | MS.gene41196:intron | 20.0% |
| !!! | ACCTTTGATTTGTTAATTAA+TGG | + | chr4.1:36990551-36990570 | MS.gene41196:intron | 20.0% |
| !!! | ATGCAATTTTAATTATCCTA+GGG | + | chr4.1:36991733-36991752 | MS.gene41196:intron | 20.0% |
| !!! | ATTTAAATGGATTCAAAAGT+GGG | + | chr4.1:36987335-36987354 | MS.gene41196:CDS | 20.0% |
| !!! | ATTTTAAGCATTTGAATCAT+AGG | + | chr4.1:36991837-36991856 | MS.gene41196:intron | 20.0% |
| !!! | CATAAGTATTATCGTATTTT+GGG | + | chr4.1:36992161-36992180 | MS.gene41196:CDS | 20.0% |
| !!! | CTATTTTCTTTGTTGTTTTA+GGG | - | chr4.1:36991612-36991631 | None:intergenic | 20.0% |
| !!! | TAATTTGAAACAATTGTTAC+CGG | + | chr4.1:36989472-36989491 | MS.gene41196:intron | 20.0% |
| !!! | TATCATGTTATAGAATTTTC+CGG | - | chr4.1:36990229-36990248 | None:intergenic | 20.0% |
| !!! | TCAAGTTATTATTAACCTTT+TGG | + | chr4.1:36988231-36988250 | MS.gene41196:intron | 20.0% |
| !!! | TCATAAGTATTATCGTATTT+TGG | + | chr4.1:36992160-36992179 | MS.gene41196:CDS | 20.0% |
| !!! | TTTAAAGAAAGCACAAATTT+TGG | - | chr4.1:36991810-36991829 | None:intergenic | 20.0% |
| !!! | TTTAATTGTGTTTTCAGTTT+CGG | - | chr4.1:36988816-36988835 | None:intergenic | 20.0% |
| !!! | TTTAGATTTAGTGTTGAATT+AGG | + | chr4.1:36989709-36989728 | MS.gene41196:intron | 20.0% |
| !!! | TTTTCATATTCTAAAACTTC+AGG | - | chr4.1:36990119-36990138 | None:intergenic | 20.0% |
| ! | AACAAAGAAAATAGCAAAGA+GGG | + | chr4.1:36991618-36991637 | MS.gene41196:intron | 25.0% |
| ! | AACACTAAATCTAAATCAAG+AGG | - | chr4.1:36989704-36989723 | None:intergenic | 25.0% |
| ! | AATACTAGGTATATGATTTG+AGG | + | chr4.1:36988106-36988125 | MS.gene41196:intron | 25.0% |
| ! | ACAAAGAAAATTCAGAAACA+GGG | - | chr4.1:36988515-36988534 | None:intergenic | 25.0% |
| ! | ACTATGTAACTGAATTATCT+TGG | + | chr4.1:36987486-36987505 | MS.gene41196:intron | 25.0% |
| ! | ACTGAAAAAAACATCTATTG+TGG | + | chr4.1:36989246-36989265 | MS.gene41196:intron | 25.0% |
| ! | AGAATTAGTAATATGATCTG+AGG | - | chr4.1:36988038-36988057 | None:intergenic | 25.0% |
| ! | AGACGACCAAAAAAAAAAAA+AGG | - | chr4.1:36990502-36990521 | None:intergenic | 25.0% |
| ! | AGCTAACTTTACCAATTAAA+TGG | - | chr4.1:36988285-36988304 | None:intergenic | 25.0% |
| ! | ATACTAGGTATATGATTTGA+GGG | + | chr4.1:36988107-36988126 | MS.gene41196:intron | 25.0% |
| ! | ATTCAAGAGAAATAATAGCT+AGG | + | chr4.1:36988651-36988670 | MS.gene41196:intron | 25.0% |
| ! | ATTTCTCAAATGTTCTTTCA+TGG | - | chr4.1:36988561-36988580 | None:intergenic | 25.0% |
| ! | CTTAACCTTTACAGAAAAAA+GGG | - | chr4.1:36987811-36987830 | None:intergenic | 25.0% |
| ! | GTATGTCAATATATATTCCT+TGG | + | chr4.1:36989353-36989372 | MS.gene41196:intron | 25.0% |
| ! | TACAAAGAAAATTCAGAAAC+AGG | - | chr4.1:36988516-36988535 | None:intergenic | 25.0% |
| ! | TATGCTATTGCTATCTAATA+AGG | - | chr4.1:36990871-36990890 | None:intergenic | 25.0% |
| ! | TGAAAATCACTTTATTCAAG+AGG | - | chr4.1:36990030-36990049 | None:intergenic | 25.0% |
| ! | TTAACCTTTACAGAAAAAAG+GGG | - | chr4.1:36987810-36987829 | None:intergenic | 25.0% |
| ! | TTAATTGATGTTCGAATTGT+AGG | - | chr4.1:36989146-36989165 | None:intergenic | 25.0% |
| ! | TTTAGTGATCTTAGAGTTAA+TGG | + | chr4.1:36988432-36988451 | MS.gene41196:intron | 25.0% |
| ! | TTTGAATCCATTTAAATGGT+GGG | - | chr4.1:36987332-36987351 | None:intergenic | 25.0% |
| ! | TTTGATACCATCTTAGAATT+TGG | - | chr4.1:36989741-36989760 | None:intergenic | 25.0% |
| !! | CACTTTTGAATCCATTTAAA+TGG | - | chr4.1:36987336-36987355 | None:intergenic | 25.0% |
| !! | CATTTAAATGGATTCAAAAG+TGG | + | chr4.1:36987334-36987353 | MS.gene41196:CDS | 25.0% |
| !! | TTAGATTTTGCACAATTTCA+GGG | - | chr4.1:36988963-36988982 | None:intergenic | 25.0% |
| !! | TTTTGAATCCATTTAAATGG+TGG | - | chr4.1:36987333-36987352 | None:intergenic | 25.0% |
| !!! | ATGTGTGAATTGTTCTAAAA+TGG | + | chr4.1:36991969-36991988 | MS.gene41196:CDS | 25.0% |
| !!! | GCTATTTTCTTTGTTGTTTT+AGG | - | chr4.1:36991613-36991632 | None:intergenic | 25.0% |
| !!! | TGCAATTTTAATTATCCTAG+GGG | + | chr4.1:36991734-36991753 | MS.gene41196:intron | 25.0% |
| !!! | TGTGTGAATTGTTCTAAAAT+GGG | + | chr4.1:36991970-36991989 | MS.gene41196:CDS | 25.0% |
| !!! | TTTAACTTTTTCTTAGTAGC+TGG | - | chr4.1:36991871-36991890 | None:intergenic | 25.0% |
| !!! | TTTTAGGGTGAATAAATGAA+GGG | - | chr4.1:36991597-36991616 | None:intergenic | 25.0% |
| AAAAACGTACAAAAAACAGC+TGG | + | chr4.1:36987104-36987123 | MS.gene41196:CDS | 30.0% | |
| AAACCCTCAAATTACAGTAT+TGG | + | chr4.1:36991407-36991426 | MS.gene41196:CDS | 30.0% | |
| AAGTTCTTTGAATTTGTGCT+AGG | - | chr4.1:36989990-36990009 | None:intergenic | 30.0% | |
| ACAGGGATAATTAGAAACAT+AGG | - | chr4.1:36988498-36988517 | None:intergenic | 30.0% | |
| ACATATTCAATTGTGAGATC+CGG | - | chr4.1:36990627-36990646 | None:intergenic | 30.0% | |
| AGACTTCTCTATTACAACAT+TGG | + | chr4.1:36988853-36988872 | MS.gene41196:intron | 30.0% | |
| AGATTTATGTTCCCTTTCTA+TGG | + | chr4.1:36987693-36987712 | MS.gene41196:intron | 30.0% | |
| AGTAACCAGAATTTCGAAAA+TGG | - | chr4.1:36989207-36989226 | None:intergenic | 30.0% | |
| CAACAAAGAAAATAGCAAAG+AGG | + | chr4.1:36991617-36991636 | MS.gene41196:intron | 30.0% | |
| CAATTAAATGGTCCTCAATT+AGG | - | chr4.1:36988273-36988292 | None:intergenic | 30.0% | |
| CCTTAACCTTTACAGAAAAA+AGG | - | chr4.1:36987812-36987831 | None:intergenic | 30.0% | |
| CTAAAGTGAATTACTCACTT+TGG | + | chr4.1:36990596-36990615 | MS.gene41196:intron | 30.0% | |
| CTAATTGAGGACCATTTAAT+TGG | + | chr4.1:36988271-36988290 | MS.gene41196:intron | 30.0% | |
| CTACTAATCACATCATAACA+AGG | - | chr4.1:36988151-36988170 | None:intergenic | 30.0% | |
| CTCAGTCAATAAAAAAACGA+GGG | + | chr4.1:36991649-36991668 | MS.gene41196:intron | 30.0% | |
| GAGATAGTCTTTACAAAACT+TGG | + | chr4.1:36989668-36989687 | MS.gene41196:intron | 30.0% | |
| GCAATGGAAAGAACTAATAA+TGG | - | chr4.1:36987977-36987996 | None:intergenic | 30.0% | |
| GCTATATTACTAGTTGAAGT+CGG | - | chr4.1:36989904-36989923 | None:intergenic | 30.0% | |
| GTAAATATTCAGTAGACAGA+GGG | - | chr4.1:36991275-36991294 | None:intergenic | 30.0% | |
| GTCTGAACTATGACAAAATT+TGG | + | chr4.1:36988744-36988763 | MS.gene41196:intron | 30.0% | |
| TAAAGCTGTCTATAAGGATT+GGG | + | chr4.1:36989924-36989943 | MS.gene41196:intron | 30.0% | |
| TAAATATTCAGTAGACAGAG+GGG | - | chr4.1:36991274-36991293 | None:intergenic | 30.0% | |
| TAAATCTAAATCAAGAGGTG+AGG | - | chr4.1:36989699-36989718 | None:intergenic | 30.0% | |
| TACGATAATACTTATGACAG+CGG | - | chr4.1:36992157-36992176 | None:intergenic | 30.0% | |
| TATAGCTAAAGCTGTCTATA+AGG | + | chr4.1:36989918-36989937 | MS.gene41196:intron | 30.0% | |
| TCACGTATATAGCAGAATTT+GGG | - | chr4.1:36987911-36987930 | None:intergenic | 30.0% | |
| TCTCAGTCAATAAAAAAACG+AGG | + | chr4.1:36991648-36991667 | MS.gene41196:intron | 30.0% | |
| TGCAGGATAATTTGAATACT+AGG | + | chr4.1:36988092-36988111 | MS.gene41196:CDS | 30.0% | |
| TGTAAATATTCAGTAGACAG+AGG | - | chr4.1:36991276-36991295 | None:intergenic | 30.0% | |
| TTAACTCTCAAGTATATAGC+TGG | - | chr4.1:36988711-36988730 | None:intergenic | 30.0% | |
| TTATCATCTTTATGTTTGGC+AGG | + | chr4.1:36988459-36988478 | MS.gene41196:intron | 30.0% | |
| TTCACGTATATAGCAGAATT+TGG | - | chr4.1:36987912-36987931 | None:intergenic | 30.0% | |
| ! | ATTTGTGGTCTGTTCTTTTT+GGG | + | chr4.1:36989293-36989312 | MS.gene41196:intron | 30.0% |
| ! | CTTAGATTTTGCACAATTTC+AGG | - | chr4.1:36988964-36988983 | None:intergenic | 30.0% |
| ! | TCAACATTCTACAGTACTTT+TGG | - | chr4.1:36989517-36989536 | None:intergenic | 30.0% |
| ! | TTTCTCTTTGTTTCCAAACA+AGG | - | chr4.1:36990346-36990365 | None:intergenic | 30.0% |
| !! | AGTTTTGTAAAGACTATCTC+AGG | - | chr4.1:36989668-36989687 | None:intergenic | 30.0% |
| !! | TTTGATTTTCCAACAAGACT+CGG | - | chr4.1:36989095-36989114 | None:intergenic | 30.0% |
| !!! | CCTTTTTTCTGTAAAGGTTA+AGG | + | chr4.1:36987809-36987828 | MS.gene41196:intron | 30.0% |
| !!! | GTTTTAGGGTGAATAAATGA+AGG | - | chr4.1:36991598-36991617 | None:intergenic | 30.0% |
| !!! | TGTGCATAATTTTGCTATTC+CGG | + | chr4.1:36990207-36990226 | MS.gene41196:intron | 30.0% |
| AAACAAAACAGTGCTATCAC+TGG | + | chr4.1:36987078-36987097 | MS.gene41196:CDS | 35.0% | |
| AAACCCAAAAACCAGATCAA+GGG | - | chr4.1:36989959-36989978 | None:intergenic | 35.0% | |
| AAAGCAAACATGAGAACTAG+TGG | - | chr4.1:36991235-36991254 | None:intergenic | 35.0% | |
| AAATATTCAGTAGACAGAGG+GGG | - | chr4.1:36991273-36991292 | None:intergenic | 35.0% | |
| AACAAAACAGTGCTATCACT+GGG | + | chr4.1:36987079-36987098 | MS.gene41196:CDS | 35.0% | |
| AACAAACAACCAAGACGATT+AGG | - | chr4.1:36991513-36991532 | None:intergenic | 35.0% | |
| AAGTGAATTACTCACTTTGG+AGG | + | chr4.1:36990599-36990618 | MS.gene41196:intron | 35.0% | |
| AATCTACCAAGTCCATAGAA+AGG | - | chr4.1:36987708-36987727 | None:intergenic | 35.0% | |
| AATGAAAAGACTGTGTAGTC+TGG | + | chr4.1:36989167-36989186 | MS.gene41196:intron | 35.0% | |
| AATTCTTTCAGTAGAAGAGC+TGG | + | chr4.1:36991060-36991079 | MS.gene41196:CDS | 35.0% | |
| AGATTACCTGAAGAAAAGTC+TGG | - | chr4.1:36991572-36991591 | None:intergenic | 35.0% | |
| AGCAAATCGAGGTTTATCTT+GGG | - | chr4.1:36991182-36991201 | None:intergenic | 35.0% | |
| AGTATCACAGGTAGAATATG+GGG | + | chr4.1:36991362-36991381 | MS.gene41196:intron | 35.0% | |
| AGTTTCAAAATCTTGGTCAG+AGG | + | chr4.1:36990843-36990862 | MS.gene41196:intron | 35.0% | |
| ATATCTTTGTGCAAAGCCTT+TGG | - | chr4.1:36987142-36987161 | None:intergenic | 35.0% | |
| ATCATTCATGTTGAAACCCA+AGG | - | chr4.1:36989373-36989392 | None:intergenic | 35.0% | |
| ATCTACCAAGTCCATAGAAA+GGG | - | chr4.1:36987707-36987726 | None:intergenic | 35.0% | |
| ATTTGCATGGGAATTCTCAA+TGG | - | chr4.1:36991453-36991472 | None:intergenic | 35.0% | |
| CACAAAACCAAATACCTTTC+TGG | - | chr4.1:36990191-36990210 | None:intergenic | 35.0% | |
| CAGTATCACAGGTAGAATAT+GGG | + | chr4.1:36991361-36991380 | MS.gene41196:intron | 35.0% | |
| CATAGTTCAGACTTCAGTTT+AGG | - | chr4.1:36988736-36988755 | None:intergenic | 35.0% | |
| CCACCAATACTGTAATTTGA+GGG | - | chr4.1:36991413-36991432 | None:intergenic | 35.0% | |
| CTAAAGCTGTCTATAAGGAT+TGG | + | chr4.1:36989923-36989942 | MS.gene41196:intron | 35.0% | |
| GATACTGAAGCAAAGATCAT+TGG | - | chr4.1:36991348-36991367 | None:intergenic | 35.0% | |
| GATTACCTGAAGAAAAGTCT+GGG | - | chr4.1:36991571-36991590 | None:intergenic | 35.0% | |
| GGAGATACTATGAGAGATTT+AGG | - | chr4.1:36989121-36989140 | None:intergenic | 35.0% | |
| GTATTCAAATTATCCTGCAC+AGG | - | chr4.1:36988091-36988110 | None:intergenic | 35.0% | |
| GTTGTTGATCATGAAGTACA+CGG | + | chr4.1:36991686-36991705 | MS.gene41196:intron | 35.0% | |
| TAGAAGCTGTGTAAAATCTG+TGG | - | chr4.1:36990976-36990995 | None:intergenic | 35.0% | |
| TATCTTTGTGCAAAGCCTTT+GGG | - | chr4.1:36987141-36987160 | None:intergenic | 35.0% | |
| TATTGAGCCGATAATGTACA+GGG | + | chr4.1:36989541-36989560 | MS.gene41196:intron | 35.0% | |
| TCAGTATCACAGGTAGAATA+TGG | + | chr4.1:36991360-36991379 | MS.gene41196:intron | 35.0% | |
| TCCACCAATACTGTAATTTG+AGG | - | chr4.1:36991414-36991433 | None:intergenic | 35.0% | |
| TCTATCCAAGACCTGTTATT+GGG | + | chr4.1:36989762-36989781 | MS.gene41196:intron | 35.0% | |
| TGCTATATACGTGAAGCATA+TGG | + | chr4.1:36987917-36987936 | MS.gene41196:intron | 35.0% | |
| TTAATACTCTCTCTTCTACC+AGG | + | chr4.1:36987940-36987959 | MS.gene41196:intron | 35.0% | |
| TTATTGAGCCGATAATGTAC+AGG | + | chr4.1:36989540-36989559 | MS.gene41196:intron | 35.0% | |
| TTCAGAAATATCTGCTGAAC+CGG | + | chr4.1:36988063-36988082 | MS.gene41196:CDS | 35.0% | |
| TTGAAACAATTGTTACCGGA+GGG | + | chr4.1:36989476-36989495 | MS.gene41196:intron | 35.0% | |
| TTGAGCGAGTTTCAAAATCT+TGG | + | chr4.1:36990836-36990855 | MS.gene41196:intron | 35.0% | |
| TTGATGTTCGAATTGTAGGT+AGG | - | chr4.1:36989142-36989161 | None:intergenic | 35.0% | |
| TTGTCTTCTTGATTGAGGTA+AGG | - | chr4.1:36991018-36991037 | None:intergenic | 35.0% | |
| TTTCTGTAAAGGTTAAGGAG+CGG | + | chr4.1:36987814-36987833 | MS.gene41196:intron | 35.0% | |
| ! | ATAATGGTCTTGATAGTACC+TGG | - | chr4.1:36987961-36987980 | None:intergenic | 35.0% |
| ! | ATTTTGCACAATTTCAGGGA+TGG | - | chr4.1:36988959-36988978 | None:intergenic | 35.0% |
| ! | CATTTGTGGTCTGTTCTTTT+TGG | + | chr4.1:36989292-36989311 | MS.gene41196:intron | 35.0% |
| ! | GTTGAGTCCAAATTCTAAGA+TGG | + | chr4.1:36989731-36989750 | MS.gene41196:intron | 35.0% |
| ! | TGTGTAGTCTGGTTTATTCA+TGG | + | chr4.1:36989178-36989197 | MS.gene41196:intron | 35.0% |
| ! | TTTGAAACAATTGTTACCGG+AGG | + | chr4.1:36989475-36989494 | MS.gene41196:intron | 35.0% |
| !! | AATCCATTTAAATGGTGGGT+AGG | - | chr4.1:36987328-36987347 | None:intergenic | 35.0% |
| !! | ATTGTTCTAAAATGGGCAAG+CGG | + | chr4.1:36991977-36991996 | MS.gene41196:CDS | 35.0% |
| !! | TAGTTTGCCAGAAAGGTATT+TGG | + | chr4.1:36990181-36990200 | MS.gene41196:intron | 35.0% |
| !! | TTAGTGCCTTATTTCCAACT+TGG | + | chr4.1:36989043-36989062 | MS.gene41196:intron | 35.0% |
| !!! | TATTAACCTTTTGGCTCAGA+GGG | + | chr4.1:36988240-36988259 | MS.gene41196:intron | 35.0% |
| !!! | TTATTAACCTTTTGGCTCAG+AGG | + | chr4.1:36988239-36988258 | MS.gene41196:intron | 35.0% |
| AAAAACCAGATCAAGGGATG+AGG | - | chr4.1:36989953-36989972 | None:intergenic | 40.0% | |
| AAAACCAGATCAAGGGATGA+GGG | - | chr4.1:36989952-36989971 | None:intergenic | 40.0% | |
| AAATAACCCTCTGAGCCAAA+AGG | - | chr4.1:36988249-36988268 | None:intergenic | 40.0% | |
| AACGAAGAGCTGGAAAATCA+AGG | + | chr4.1:36990155-36990174 | MS.gene41196:CDS | 40.0% | |
| AAGTACTTAATCCCCGAGTT+GGG | - | chr4.1:36990732-36990751 | None:intergenic | 40.0% | |
| AATATGGGTGACCCAATAAC+AGG | - | chr4.1:36989776-36989795 | None:intergenic | 40.0% | |
| ACAGGATCTCAGTATTTGCA+TGG | - | chr4.1:36991466-36991485 | None:intergenic | 40.0% | |
| ACATTCCAGTGCATCAGTAA+AGG | - | chr4.1:36988005-36988024 | None:intergenic | 40.0% | |
| ACCATGCGTCAATGAAACAA+GGG | - | chr4.1:36987172-36987191 | None:intergenic | 40.0% | |
| ACGAAGAGCTGGAAAATCAA+GGG | + | chr4.1:36990156-36990175 | MS.gene41196:CDS | 40.0% | |
| ACTACGTCTACATCCAACTA+TGG | + | chr4.1:36992086-36992105 | MS.gene41196:CDS | 40.0% | |
| ACTTTATTCATCCCCAACTC+GGG | + | chr4.1:36990717-36990736 | MS.gene41196:intron | 40.0% | |
| AGGAAAGTGATCTTGCAGAA+TGG | - | chr4.1:36991493-36991512 | None:intergenic | 40.0% | |
| ATAAACGTGTTGCACAGACA+AGG | - | chr4.1:36991783-36991802 | None:intergenic | 40.0% | |
| ATCAGTAAAGGCTGTTGCAA+TGG | - | chr4.1:36987993-36988012 | None:intergenic | 40.0% | |
| ATCTTGCAGAATGGAAGAAC+AGG | - | chr4.1:36991484-36991503 | None:intergenic | 40.0% | |
| ATGTTCCCTTTCTATGGACT+TGG | + | chr4.1:36987699-36987718 | MS.gene41196:intron | 40.0% | |
| ATGTTTGGCAGGTTTCTTTC+TGG | + | chr4.1:36988470-36988489 | MS.gene41196:intron | 40.0% | |
| CAAACCCAAAAACCAGATCA+AGG | - | chr4.1:36989960-36989979 | None:intergenic | 40.0% | |
| CAACCAACATGCTCAGAAAA+CGG | - | chr4.1:36989319-36989338 | None:intergenic | 40.0% | |
| CAAGAAGACGTTGTAGAAAC+TGG | - | chr4.1:36989013-36989032 | None:intergenic | 40.0% | |
| CAATCAAGAAGACAATACGC+TGG | + | chr4.1:36991023-36991042 | MS.gene41196:CDS | 40.0% | |
| CACTTTATTCATCCCCAACT+CGG | + | chr4.1:36990716-36990735 | MS.gene41196:intron | 40.0% | |
| CAGGATCTCAGTATTTGCAT+GGG | - | chr4.1:36991465-36991484 | None:intergenic | 40.0% | |
| CATCGATGTTTGTGTACTTC+TGG | + | chr4.1:36987554-36987573 | MS.gene41196:intron | 40.0% | |
| CGGTCATCTAATACCATAGT+TGG | - | chr4.1:36992102-36992121 | None:intergenic | 40.0% | |
| GAGCAAATCGAGGTTTATCT+TGG | - | chr4.1:36991183-36991202 | None:intergenic | 40.0% | |
| GAGGGTTATTTGCCTAATTG+AGG | + | chr4.1:36988258-36988277 | MS.gene41196:intron | 40.0% | |
| GATCACTTTCCTAATCGTCT+TGG | + | chr4.1:36991501-36991520 | MS.gene41196:CDS | 40.0% | |
| GATCTTTGCTTCAGTATCAC+AGG | + | chr4.1:36991350-36991369 | MS.gene41196:intron | 40.0% | |
| GCACAAACACCACTAAATCA+TGG | - | chr4.1:36990933-36990952 | None:intergenic | 40.0% | |
| GCGTATTGTCTTCTTGATTG+AGG | - | chr4.1:36991023-36991042 | None:intergenic | 40.0% | |
| GCTGGAAATGTGGTCAAATA+TGG | + | chr4.1:36991078-36991097 | MS.gene41196:CDS | 40.0% | |
| GTCTATCCAAGACCTGTTAT+TGG | + | chr4.1:36989761-36989780 | MS.gene41196:intron | 40.0% | |
| GTTAAATGTGGGATCATCCA+GGG | - | chr4.1:36988337-36988356 | None:intergenic | 40.0% | |
| GTTAGTAGTCGTTAGTAGTC+TGG | + | chr4.1:36988913-36988932 | MS.gene41196:intron | 40.0% | |
| TAAAACTTCAGGAGCTCTCT+CGG | - | chr4.1:36990108-36990127 | None:intergenic | 40.0% | |
| TAACAAGCACCAACATCGAA+AGG | - | chr4.1:36989588-36989607 | None:intergenic | 40.0% | |
| TAAGTACTTAATCCCCGAGT+TGG | - | chr4.1:36990733-36990752 | None:intergenic | 40.0% | |
| TCAAAGCAACAACTATGACC+AGG | + | chr4.1:36992122-36992141 | MS.gene41196:CDS | 40.0% | |
| TCAAATATGGTGTTCTGGCA+TGG | + | chr4.1:36991091-36991110 | MS.gene41196:CDS | 40.0% | |
| TCAACACTGCCATCATATCT+TGG | + | chr4.1:36991934-36991953 | MS.gene41196:CDS | 40.0% | |
| TGTGGTCAAATATGGTGTTC+TGG | + | chr4.1:36991086-36991105 | MS.gene41196:CDS | 40.0% | |
| TGTTAAATGTGGGATCATCC+AGG | - | chr4.1:36988338-36988357 | None:intergenic | 40.0% | |
| TTAGAGAGTAAAGCGAGCAA+AGG | - | chr4.1:36990580-36990599 | None:intergenic | 40.0% | |
| TTGCCTACCCACCATTTAAA+TGG | + | chr4.1:36987322-36987341 | MS.gene41196:CDS | 40.0% | |
| TTGTTTCCAAACAAGGAGAC+AGG | - | chr4.1:36990339-36990358 | None:intergenic | 40.0% | |
| ! | AGATAAACCTCGATTTGCTC+AGG | + | chr4.1:36991183-36991202 | MS.gene41196:CDS | 40.0% |
| ! | AGTGCACCAAGTTGGAAATA+AGG | - | chr4.1:36989052-36989071 | None:intergenic | 40.0% |
| ! | AGTTGCTTTGCACAATTGAG+CGG | + | chr4.1:36990398-36990417 | MS.gene41196:intron | 40.0% |
| ! | CCCTCAAATTACAGTATTGG+TGG | + | chr4.1:36991410-36991429 | MS.gene41196:CDS | 40.0% |
| ! | CGAAAGGCTAAGGTTGATTT+GGG | - | chr4.1:36989572-36989591 | None:intergenic | 40.0% |
| ! | GGCTTCCATTTTCGAAATTC+TGG | + | chr4.1:36989199-36989218 | MS.gene41196:intron | 40.0% |
| ! | GTTCTAGTTGACTTAGTCCT+AGG | + | chr4.1:36989803-36989822 | MS.gene41196:intron | 40.0% |
| ! | TATTGCCCAGACTTTTCTTC+AGG | + | chr4.1:36991563-36991582 | MS.gene41196:CDS | 40.0% |
| ! | TCGAAAGGCTAAGGTTGATT+TGG | - | chr4.1:36989573-36989592 | None:intergenic | 40.0% |
| ! | TGTTCCACGACGTTTTATGT+GGG | + | chr4.1:36987585-36987604 | MS.gene41196:intron | 40.0% |
| ! | TTGTAGAAACTGGTTCAGTG+TGG | - | chr4.1:36989003-36989022 | None:intergenic | 40.0% |
| ! | TTGTTCCACGACGTTTTATG+TGG | + | chr4.1:36987584-36987603 | MS.gene41196:intron | 40.0% |
| !! | AAGGGATTAGTTTGCCAGAA+AGG | + | chr4.1:36990174-36990193 | MS.gene41196:CDS | 40.0% |
| !! | ATTTAAATGGTGGGTAGGCA+AGG | - | chr4.1:36987323-36987342 | None:intergenic | 40.0% |
| !! | GAAAGGCTAAGGTTGATTTG+GGG | - | chr4.1:36989571-36989590 | None:intergenic | 40.0% |
| !! | GGTCATAGTTGTTGCTTTGA+CGG | - | chr4.1:36992122-36992141 | None:intergenic | 40.0% |
| !! | TTGCTGCTTTAGAAGCTGTA+AGG | + | chr4.1:36987241-36987260 | MS.gene41196:CDS | 40.0% |
| !!! | CATCCCTTGATCTGGTTTTT+GGG | + | chr4.1:36989953-36989972 | MS.gene41196:intron | 40.0% |
| !!! | CTGGTTTTTGGGTTTGAGTT+AGG | + | chr4.1:36989964-36989983 | MS.gene41196:intron | 40.0% |
| !!! | GTAGCCCCTTTTTTCTGTAA+AGG | + | chr4.1:36987803-36987822 | MS.gene41196:intron | 40.0% |
| !!! | TCATCCCTTGATCTGGTTTT+TGG | + | chr4.1:36989952-36989971 | MS.gene41196:intron | 40.0% |
| !!! | TTTTGGGTTGTCATAGCTCT+TGG | + | chr4.1:36992177-36992196 | MS.gene41196:CDS | 40.0% |
| AAAACTTCAGGAGCTCTCTC+GGG | - | chr4.1:36990107-36990126 | None:intergenic | 45.0% | |
| AAAGGTTAAGGAGCGGAGAA+CGG | + | chr4.1:36987821-36987840 | MS.gene41196:intron | 45.0% | |
| AAATTATCCTGCACAGGAGC+CGG | - | chr4.1:36988085-36988104 | None:intergenic | 45.0% | |
| AACAGCCTTTACTGATGCAC+TGG | + | chr4.1:36987997-36988016 | MS.gene41196:CDS | 45.0% | |
| ACAAATGCATAAGAGCCCTC+CGG | - | chr4.1:36989494-36989513 | None:intergenic | 45.0% | |
| ACACTGCCATCATATCTTGG+AGG | + | chr4.1:36991937-36991956 | MS.gene41196:CDS | 45.0% | |
| ACAGACCCTGTCTCATTGTA+AGG | + | chr4.1:36991128-36991147 | MS.gene41196:CDS | 45.0% | |
| AGAGTGCAACCTCATGAAAC+TGG | + | chr4.1:36992003-36992022 | MS.gene41196:CDS | 45.0% | |
| AGTACTTAATCCCCGAGTTG+GGG | - | chr4.1:36990731-36990750 | None:intergenic | 45.0% | |
| AGTAGTCGTTAGTAGTCTGG+TGG | + | chr4.1:36988916-36988935 | MS.gene41196:intron | 45.0% | |
| CACCATGCGTCAATGAAACA+AGG | - | chr4.1:36987173-36987192 | None:intergenic | 45.0% | |
| CAGCAGCAGCAGAATTGTTA+GGG | + | chr4.1:36992029-36992048 | MS.gene41196:CDS | 45.0% | |
| CAGTAGAAGAGCTGGAAATG+TGG | + | chr4.1:36991068-36991087 | MS.gene41196:CDS | 45.0% | |
| CCAAGCCTTACAATGAGACA+GGG | - | chr4.1:36991136-36991155 | None:intergenic | 45.0% | |
| CCATGCGTCAATGAAACAAG+GGG | - | chr4.1:36987171-36987190 | None:intergenic | 45.0% | |
| CCTGTCTCATTGTAAGGCTT+GGG | + | chr4.1:36991134-36991153 | MS.gene41196:CDS | 45.0% | |
| CTAATTGCCTGAGCAAATCG+AGG | - | chr4.1:36991193-36991212 | None:intergenic | 45.0% | |
| CTTGGTTTCTTCTGTTGCAG+TGG | + | chr4.1:36990906-36990925 | MS.gene41196:intron | 45.0% | |
| CTTTATTCATCCCCAACTCG+GGG | + | chr4.1:36990718-36990737 | MS.gene41196:intron | 45.0% | |
| GAGTGCAACCTCATGAAACT+GGG | + | chr4.1:36992004-36992023 | MS.gene41196:CDS | 45.0% | |
| GATATGCAACAACCAAACCC+TGG | + | chr4.1:36988317-36988336 | MS.gene41196:intron | 45.0% | |
| GATGCACTGGAATGTAGTGA+TGG | + | chr4.1:36988010-36988029 | MS.gene41196:CDS | 45.0% | |
| GCAATAACACGAGCAATTGC+TGG | - | chr4.1:36991549-36991568 | None:intergenic | 45.0% | |
| GGATGATATCAGTGACAACG+AGG | + | chr4.1:36992053-36992072 | MS.gene41196:CDS | 45.0% | |
| GGGCGCATCAAATATTGAAG+AGG | + | chr4.1:36991754-36991773 | MS.gene41196:intron | 45.0% | |
| GTAACCCACATAAAACGTCG+TGG | - | chr4.1:36987592-36987611 | None:intergenic | 45.0% | |
| GTTGGATGTAGACGTAGTGA+TGG | - | chr4.1:36992084-36992103 | None:intergenic | 45.0% | |
| TCAAGAAGACAATACGCTGG+CGG | + | chr4.1:36991026-36991045 | MS.gene41196:CDS | 45.0% | |
| TCAATATTTGATGCGCCCCT+AGG | - | chr4.1:36991752-36991771 | None:intergenic | 45.0% | |
| TCATTGACGCATGGTGACTT+TGG | + | chr4.1:36987177-36987196 | MS.gene41196:CDS | 45.0% | |
| TCGGATCTCAAAACACACAC+AGG | - | chr4.1:36989885-36989904 | None:intergenic | 45.0% | |
| TCTACTCCTGTCTCCTTGTT+TGG | + | chr4.1:36990330-36990349 | MS.gene41196:intron | 45.0% | |
| TCTCAAAACACACACAGGAC+TGG | - | chr4.1:36989880-36989899 | None:intergenic | 45.0% | |
| TGACTTAGTCCTAGGCATGA+GGG | + | chr4.1:36989811-36989830 | MS.gene41196:intron | 45.0% | |
| TGCAGTGGACCATGATTTAG+TGG | + | chr4.1:36990921-36990940 | MS.gene41196:intron | 45.0% | |
| TTGACTTAGTCCTAGGCATG+AGG | + | chr4.1:36989810-36989829 | MS.gene41196:intron | 45.0% | |
| ! | ATTACTCACTTTGGAGGAGC+CGG | + | chr4.1:36990605-36990624 | MS.gene41196:intron | 45.0% |
| ! | CAACCTTAGCCTTTCGATGT+TGG | + | chr4.1:36989576-36989595 | MS.gene41196:intron | 45.0% |
| ! | GGGTTTGGTTAAAAGCATGC+AGG | + | chr4.1:36987368-36987387 | MS.gene41196:CDS | 45.0% |
| !! | ACAGTATTGGTGGACTGTGA+AGG | + | chr4.1:36991420-36991439 | MS.gene41196:CDS | 45.0% |
| !! | TCAAAAGTGGGCTGTGTTCA+GGG | + | chr4.1:36987347-36987366 | MS.gene41196:CDS | 45.0% |
| !! | TTCAAAAGTGGGCTGTGTTC+AGG | + | chr4.1:36987346-36987365 | MS.gene41196:CDS | 45.0% |
| AGAGCGTGGAAAATAGCAGG+TGG | - | chr4.1:36989851-36989870 | None:intergenic | 50.0% | |
| AGAGTAGATGCCCTTGTGTC+TGG | + | chr4.1:36987274-36987293 | MS.gene41196:CDS | 50.0% | |
| ATGTGGGATCATCCAGGGTT+TGG | - | chr4.1:36988332-36988351 | None:intergenic | 50.0% | |
| CAAGAAGACAATACGCTGGC+GGG | + | chr4.1:36991027-36991046 | MS.gene41196:CDS | 50.0% | |
| CAGCAGCAGAATTGTTAGGG+AGG | + | chr4.1:36992032-36992051 | MS.gene41196:CDS | 50.0% | |
| CAGCTGCCTCCAAGATATGA+TGG | - | chr4.1:36991946-36991965 | None:intergenic | 50.0% | |
| CCAGCAGCAGCAGAATTGTT+AGG | + | chr4.1:36992028-36992047 | MS.gene41196:CDS | 50.0% | |
| CCCAAGCCTTACAATGAGAC+AGG | - | chr4.1:36991137-36991156 | None:intergenic | 50.0% | |
| CCCTGTCTCATTGTAAGGCT+TGG | + | chr4.1:36991133-36991152 | MS.gene41196:CDS | 50.0% | |
| CCTAACAATTCTGCTGCTGC+TGG | - | chr4.1:36992031-36992050 | None:intergenic | 50.0% | |
| CGTAGAGCGTGGAAAATAGC+AGG | - | chr4.1:36989854-36989873 | None:intergenic | 50.0% | |
| GACTCAACTCAACGAAGAGC+TGG | + | chr4.1:36990145-36990164 | MS.gene41196:CDS | 50.0% | |
| GACTTAGTCCTAGGCATGAG+GGG | + | chr4.1:36989812-36989831 | MS.gene41196:intron | 50.0% | |
| GAGTCAGCACTTGCATCAGT+TGG | - | chr4.1:36988789-36988808 | None:intergenic | 50.0% | |
| GCACCAACATCGAAAGGCTA+AGG | - | chr4.1:36989582-36989601 | None:intergenic | 50.0% | |
| GGGTCAGCCCTGTACATTAT+CGG | - | chr4.1:36989551-36989570 | None:intergenic | 50.0% | |
| GGTGACCCAATAACAGGTCT+TGG | - | chr4.1:36989770-36989789 | None:intergenic | 50.0% | |
| TCCTGCAAAGTGCACCAAGT+TGG | - | chr4.1:36989060-36989079 | None:intergenic | 50.0% | |
| ! | ACTTTGGAAGCAGTGCTGTG+GGG | + | chr4.1:36987193-36987212 | MS.gene41196:CDS | 50.0% |
| ! | AGAGTCTAGCCGAGTCTTGT+TGG | + | chr4.1:36989083-36989102 | MS.gene41196:intron | 50.0% |
| ! | CCCCTTGTTTCATTGACGCA+TGG | + | chr4.1:36987168-36987187 | MS.gene41196:CDS | 50.0% |
| ! | GACTTTGGAAGCAGTGCTGT+GGG | + | chr4.1:36987192-36987211 | MS.gene41196:CDS | 50.0% |
| ! | GGTCGTCTGTACGCTCTTTT+TGG | + | chr4.1:36990514-36990533 | MS.gene41196:intron | 50.0% |
| ! | GTTGTCATAGCTCTTGGTGC+TGG | + | chr4.1:36992183-36992202 | MS.gene41196:CDS | 50.0% |
| ! | TGACTTTGGAAGCAGTGCTG+TGG | + | chr4.1:36987191-36987210 | MS.gene41196:CDS | 50.0% |
| ! | TGGGATAGCTTGCAGCACAT+TGG | + | chr4.1:36991153-36991172 | MS.gene41196:CDS | 50.0% |
| !! | CAAAAGTGGGCTGTGTTCAG+GGG | + | chr4.1:36987348-36987367 | MS.gene41196:CDS | 50.0% |
| !! | TCCAACTTGGTGCACTTTGC+AGG | + | chr4.1:36989056-36989075 | MS.gene41196:intron | 50.0% |
| !! | TCTCGGGTTGACTGCGAAAA+AGG | - | chr4.1:36990091-36990110 | None:intergenic | 50.0% |
| AGATGCCCTTGTGTCTGGCA+AGG | + | chr4.1:36987279-36987298 | MS.gene41196:CDS | 55.0% | |
| CTGCTGGTCCCAGTTTCATG+AGG | - | chr4.1:36992015-36992034 | None:intergenic | 55.0% | |
| GCAGACCTTGCCAGACACAA+GGG | - | chr4.1:36987287-36987306 | None:intergenic | 55.0% | |
| GGAACCCTCATCCCTTGATC+TGG | + | chr4.1:36989945-36989964 | MS.gene41196:intron | 55.0% | |
| TGACAGCGGTTCTCAACACC+TGG | - | chr4.1:36992143-36992162 | None:intergenic | 55.0% | |
| TGCAGACCTTGCCAGACACA+AGG | - | chr4.1:36987288-36987307 | None:intergenic | 55.0% | |
| TGTGTCTGGCAAGGTCTGCA+GGG | + | chr4.1:36987288-36987307 | MS.gene41196:CDS | 55.0% | |
| TTGTGTCTGGCAAGGTCTGC+AGG | + | chr4.1:36987287-36987306 | MS.gene41196:CDS | 55.0% | |
| ! | GGTGCTGGAGTATACGAACC+TGG | + | chr4.1:36992198-36992217 | MS.gene41196:CDS | 55.0% |
| !! | GCATGAGGGGTGTTCTCGTT+TGG | + | chr4.1:36989825-36989844 | MS.gene41196:intron | 55.0% |
| !! | GGGCCGTTTTCTGAGCATGT+TGG | + | chr4.1:36989313-36989332 | MS.gene41196:intron | 55.0% |
| AGGACTGGACACGTAGAGCG+TGG | - | chr4.1:36989865-36989884 | None:intergenic | 60.0% | |
| CGAGAACACCCCTCATGCCT+AGG | - | chr4.1:36989823-36989842 | None:intergenic | 60.0% | |
| ! | GTGGGCTGTGTTCAGGGGTT+TGG | + | chr4.1:36987353-36987372 | MS.gene41196:CDS | 60.0% |
| CTGGTTGCGTCGCGTCCCAA+AGG | + | chr4.1:36987123-36987142 | MS.gene41196:CDS | 65.0% | |
| ! | TGCTGAACCGGCTCCTGTGC+AGG | + | chr4.1:36988075-36988094 | MS.gene41196:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 36987030 | 36992227 | 36987030 | ID=MS.gene41196 |
| chr4.1 | mRNA | 36987030 | 36992227 | 36987030 | ID=MS.gene41196.t1;Parent=MS.gene41196 |
| chr4.1 | exon | 36987030 | 36987389 | 36987030 | ID=MS.gene41196.t1.exon1;Parent=MS.gene41196.t1 |
| chr4.1 | CDS | 36987030 | 36987389 | 36987030 | ID=cds.MS.gene41196.t1;Parent=MS.gene41196.t1 |
| chr4.1 | exon | 36987962 | 36988113 | 36987962 | ID=MS.gene41196.t1.exon2;Parent=MS.gene41196.t1 |
| chr4.1 | CDS | 36987962 | 36988113 | 36987962 | ID=cds.MS.gene41196.t1;Parent=MS.gene41196.t1 |
| chr4.1 | exon | 36990100 | 36990195 | 36990100 | ID=MS.gene41196.t1.exon3;Parent=MS.gene41196.t1 |
| chr4.1 | CDS | 36990100 | 36990195 | 36990100 | ID=cds.MS.gene41196.t1;Parent=MS.gene41196.t1 |
| chr4.1 | exon | 36990955 | 36991211 | 36990955 | ID=MS.gene41196.t1.exon4;Parent=MS.gene41196.t1 |
| chr4.1 | CDS | 36990955 | 36991211 | 36990955 | ID=cds.MS.gene41196.t1;Parent=MS.gene41196.t1 |
| chr4.1 | exon | 36991364 | 36991584 | 36991364 | ID=MS.gene41196.t1.exon5;Parent=MS.gene41196.t1 |
| chr4.1 | CDS | 36991364 | 36991584 | 36991364 | ID=cds.MS.gene41196.t1;Parent=MS.gene41196.t1 |
| chr4.1 | exon | 36991859 | 36992227 | 36991859 | ID=MS.gene41196.t1.exon6;Parent=MS.gene41196.t1 |
| chr4.1 | CDS | 36991859 | 36992227 | 36991859 | ID=cds.MS.gene41196.t1;Parent=MS.gene41196.t1 |
| Gene Sequence |
| Protein sequence |
