Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41566.t1 | XP_003600821.2 | 73.6 | 371 | 82 | 2 | 1 | 355 | 1 | 371 | 9.20E-154 | 553.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41566.t1 | Q9FJ45 | 43.9 | 374 | 178 | 11 | 1 | 346 | 1 | 370 | 5.0e-76 | 286.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41566.t1 | G7JAK8 | 73.6 | 371 | 82 | 2 | 1 | 355 | 1 | 371 | 6.6e-154 | 553.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene54327 | MS.gene41566 | PPI |
MS.gene01537 | MS.gene41566 | PPI |
MS.gene002554 | MS.gene41566 | PPI |
MS.gene002555 | MS.gene41566 | PPI |
MS.gene002553 | MS.gene41566 | PPI |
MS.gene004227 | MS.gene41566 | PPI |
MS.gene01535 | MS.gene41566 | PPI |
MS.gene54325 | MS.gene41566 | PPI |
MS.gene54326 | MS.gene41566 | PPI |
MS.gene004228 | MS.gene41566 | PPI |
MS.gene01536 | MS.gene41566 | PPI |
MS.gene41566 | MS.gene004229 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41566.t1 | MTR_3g069780 | 73.585 | 371 | 82 | 2 | 1 | 355 | 1 | 371 | 0.0 | 545 |
MS.gene41566.t1 | MTR_3g438030 | 72.776 | 371 | 85 | 2 | 1 | 355 | 1 | 371 | 0.0 | 541 |
MS.gene41566.t1 | MTR_3g069520 | 72.581 | 372 | 82 | 4 | 1 | 355 | 1 | 369 | 0.0 | 531 |
MS.gene41566.t1 | MTR_3g448360 | 70.777 | 373 | 89 | 5 | 1 | 355 | 1 | 371 | 0.0 | 524 |
MS.gene41566.t1 | MTR_3g463960 | 60.465 | 387 | 121 | 6 | 1 | 355 | 2 | 388 | 3.26e-157 | 446 |
MS.gene41566.t1 | MTR_3g463950 | 60.465 | 387 | 121 | 6 | 1 | 355 | 2 | 388 | 3.26e-157 | 446 |
MS.gene41566.t1 | MTR_3g463970 | 60.465 | 387 | 121 | 6 | 1 | 355 | 2 | 388 | 3.26e-157 | 446 |
MS.gene41566.t1 | MTR_3g463940 | 60.465 | 387 | 121 | 6 | 1 | 355 | 2 | 388 | 3.26e-157 | 446 |
MS.gene41566.t1 | MTR_3g463930 | 59.137 | 394 | 122 | 5 | 1 | 355 | 2 | 395 | 1.01e-156 | 445 |
MS.gene41566.t1 | MTR_2g079090 | 60.858 | 373 | 114 | 8 | 1 | 355 | 1 | 359 | 2.07e-151 | 431 |
MS.gene41566.t1 | MTR_0029s0050 | 60.858 | 373 | 114 | 8 | 1 | 355 | 1 | 359 | 8.49e-150 | 426 |
MS.gene41566.t1 | MTR_2g079080 | 60.054 | 373 | 117 | 8 | 1 | 355 | 1 | 359 | 1.25e-148 | 424 |
MS.gene41566.t1 | MTR_0029s0100 | 60.322 | 373 | 116 | 8 | 1 | 355 | 1 | 359 | 1.15e-147 | 421 |
MS.gene41566.t1 | MTR_2g043980 | 54.521 | 376 | 129 | 10 | 1 | 355 | 7 | 361 | 4.07e-128 | 372 |
MS.gene41566.t1 | MTR_2g015650 | 47.978 | 371 | 169 | 8 | 6 | 355 | 7 | 374 | 9.74e-111 | 328 |
MS.gene41566.t1 | MTR_2g015670 | 46.479 | 355 | 162 | 8 | 17 | 355 | 18 | 360 | 1.48e-101 | 304 |
MS.gene41566.t1 | MTR_2g015630 | 44.023 | 343 | 162 | 7 | 35 | 352 | 36 | 373 | 1.26e-89 | 274 |
MS.gene41566.t1 | MTR_2g015580 | 41.144 | 367 | 183 | 7 | 5 | 348 | 27 | 383 | 1.21e-88 | 272 |
MS.gene41566.t1 | MTR_2g015590 | 42.229 | 341 | 170 | 8 | 28 | 345 | 29 | 365 | 1.06e-84 | 261 |
MS.gene41566.t1 | MTR_3g466190 | 77.711 | 166 | 10 | 3 | 52 | 205 | 1 | 151 | 3.45e-78 | 239 |
MS.gene41566.t1 | MTR_3g466190 | 89.744 | 78 | 8 | 0 | 278 | 355 | 152 | 229 | 2.13e-45 | 155 |
MS.gene41566.t1 | MTR_2g043990 | 46.801 | 297 | 109 | 9 | 1 | 276 | 69 | 337 | 1.41e-72 | 229 |
MS.gene41566.t1 | MTR_3g466240 | 54.762 | 210 | 68 | 5 | 104 | 303 | 2 | 194 | 9.78e-67 | 209 |
MS.gene41566.t1 | MTR_4g104240 | 34.985 | 343 | 188 | 11 | 27 | 345 | 36 | 367 | 5.86e-63 | 205 |
MS.gene41566.t1 | MTR_2g015590 | 41.176 | 272 | 137 | 6 | 28 | 277 | 29 | 299 | 2.93e-58 | 192 |
MS.gene41566.t1 | MTR_7g087190 | 31.854 | 383 | 214 | 11 | 1 | 347 | 14 | 385 | 9.56e-53 | 179 |
MS.gene41566.t1 | MTR_1g030268 | 35.795 | 352 | 181 | 11 | 28 | 347 | 38 | 376 | 1.71e-50 | 173 |
MS.gene41566.t1 | MTR_7g116870 | 34.582 | 347 | 188 | 12 | 28 | 345 | 31 | 367 | 2.64e-49 | 170 |
MS.gene41566.t1 | MTR_8g028160 | 33.062 | 369 | 199 | 14 | 13 | 345 | 18 | 374 | 5.43e-49 | 169 |
MS.gene41566.t1 | MTR_7g111780 | 33.333 | 339 | 189 | 10 | 30 | 347 | 36 | 358 | 5.01e-48 | 166 |
MS.gene41566.t1 | MTR_1g030220 | 33.154 | 371 | 180 | 13 | 28 | 355 | 38 | 383 | 9.97e-48 | 166 |
MS.gene41566.t1 | MTR_6g007090 | 33.333 | 381 | 197 | 14 | 4 | 347 | 12 | 372 | 1.51e-46 | 162 |
MS.gene41566.t1 | MTR_8g089805 | 30.263 | 380 | 217 | 10 | 4 | 347 | 14 | 381 | 1.93e-46 | 162 |
MS.gene41566.t1 | MTR_1g030275 | 35.393 | 356 | 177 | 14 | 28 | 347 | 37 | 375 | 4.88e-46 | 161 |
MS.gene41566.t1 | MTR_1g030230 | 32.964 | 361 | 197 | 8 | 20 | 347 | 22 | 370 | 7.02e-46 | 161 |
MS.gene41566.t1 | MTR_1g030340 | 32.410 | 361 | 184 | 9 | 28 | 347 | 40 | 381 | 1.41e-43 | 155 |
MS.gene41566.t1 | MTR_7g033150 | 32.231 | 363 | 192 | 11 | 28 | 350 | 33 | 381 | 4.66e-42 | 151 |
MS.gene41566.t1 | MTR_7g033165 | 31.356 | 354 | 195 | 10 | 28 | 346 | 31 | 371 | 6.06e-41 | 148 |
MS.gene41566.t1 | MTR_7g113860 | 29.708 | 377 | 217 | 14 | 3 | 345 | 10 | 372 | 1.78e-40 | 147 |
MS.gene41566.t1 | MTR_7g113860 | 31.445 | 353 | 198 | 13 | 26 | 345 | 25 | 366 | 7.67e-40 | 145 |
MS.gene41566.t1 | MTR_7g033155 | 31.551 | 374 | 191 | 12 | 28 | 350 | 36 | 395 | 7.10e-39 | 142 |
MS.gene41566.t1 | MTR_6g007095 | 31.070 | 383 | 209 | 11 | 1 | 345 | 7 | 372 | 2.63e-38 | 145 |
MS.gene41566.t1 | MTR_6g007095 | 30.088 | 339 | 176 | 10 | 50 | 347 | 372 | 690 | 7.90e-29 | 117 |
MS.gene41566.t1 | MTR_1g030268 | 35.211 | 284 | 152 | 7 | 28 | 287 | 38 | 313 | 1.74e-37 | 137 |
MS.gene41566.t1 | MTR_1g082390 | 28.177 | 362 | 215 | 10 | 20 | 348 | 21 | 370 | 1.38e-36 | 136 |
MS.gene41566.t1 | MTR_8g038680 | 29.888 | 358 | 196 | 12 | 28 | 347 | 26 | 366 | 5.03e-36 | 134 |
MS.gene41566.t1 | MTR_6g007100 | 31.034 | 348 | 189 | 13 | 28 | 347 | 31 | 355 | 4.23e-33 | 126 |
MS.gene41566.t1 | MTR_8g022810 | 31.268 | 355 | 201 | 16 | 2 | 333 | 17 | 351 | 8.53e-33 | 126 |
MS.gene41566.t1 | MTR_1g030265 | 32.667 | 300 | 160 | 9 | 81 | 347 | 53 | 343 | 1.39e-32 | 125 |
MS.gene41566.t1 | MTR_7g111780 | 31.439 | 264 | 147 | 8 | 105 | 347 | 9 | 259 | 1.26e-31 | 120 |
MS.gene41566.t1 | MTR_8g031420 | 30.081 | 369 | 202 | 17 | 2 | 340 | 5 | 347 | 1.39e-29 | 117 |
MS.gene41566.t1 | MTR_8g089805 | 27.365 | 296 | 174 | 8 | 86 | 347 | 25 | 313 | 1.41e-28 | 113 |
MS.gene41566.t1 | MTR_7g033165 | 31.801 | 261 | 148 | 6 | 28 | 263 | 31 | 286 | 1.16e-27 | 110 |
MS.gene41566.t1 | MTR_8g031430 | 30.606 | 330 | 193 | 13 | 30 | 340 | 37 | 349 | 2.00e-27 | 111 |
MS.gene41566.t1 | MTR_2g033930 | 28.313 | 332 | 201 | 9 | 30 | 340 | 32 | 347 | 2.33e-27 | 110 |
MS.gene41566.t1 | MTR_8g031390 | 29.825 | 342 | 189 | 15 | 26 | 340 | 31 | 348 | 2.67e-27 | 111 |
MS.gene41566.t1 | MTR_2g044100 | 30.058 | 346 | 200 | 14 | 23 | 343 | 36 | 364 | 1.03e-26 | 109 |
MS.gene41566.t1 | MTR_3g098270 | 27.954 | 347 | 193 | 12 | 28 | 341 | 32 | 354 | 3.24e-26 | 108 |
MS.gene41566.t1 | MTR_5g022630 | 30.168 | 358 | 196 | 14 | 4 | 330 | 17 | 351 | 8.40e-26 | 106 |
MS.gene41566.t1 | MTR_3g052580 | 29.118 | 340 | 192 | 12 | 30 | 341 | 28 | 346 | 9.13e-26 | 107 |
MS.gene41566.t1 | MTR_3g052490 | 29.651 | 344 | 186 | 13 | 30 | 341 | 32 | 351 | 1.11e-25 | 106 |
MS.gene41566.t1 | MTR_3g052580 | 28.689 | 366 | 201 | 14 | 4 | 341 | 12 | 345 | 1.12e-25 | 107 |
MS.gene41566.t1 | MTR_4g056280 | 28.177 | 362 | 212 | 14 | 5 | 338 | 3 | 344 | 1.26e-25 | 106 |
MS.gene41566.t1 | MTR_8g014910 | 27.248 | 367 | 206 | 14 | 3 | 338 | 11 | 347 | 1.53e-25 | 105 |
MS.gene41566.t1 | MTR_8g031400 | 30.000 | 340 | 192 | 13 | 26 | 340 | 31 | 349 | 5.80e-25 | 104 |
MS.gene41566.t1 | MTR_1g025720 | 29.305 | 331 | 185 | 13 | 28 | 331 | 35 | 343 | 8.01e-25 | 103 |
MS.gene41566.t1 | MTR_7g113860 | 27.946 | 297 | 178 | 11 | 79 | 345 | 8 | 298 | 9.58e-25 | 102 |
MS.gene41566.t1 | MTR_5g074270 | 28.571 | 329 | 201 | 12 | 28 | 335 | 31 | 346 | 1.15e-24 | 103 |
MS.gene41566.t1 | MTR_4g122200 | 25.789 | 380 | 224 | 12 | 1 | 353 | 15 | 363 | 5.37e-24 | 101 |
MS.gene41566.t1 | MTR_1g025760 | 28.955 | 335 | 194 | 12 | 30 | 339 | 80 | 395 | 5.92e-24 | 102 |
MS.gene41566.t1 | MTR_1g025680 | 29.189 | 370 | 201 | 18 | 3 | 339 | 8 | 349 | 2.34e-23 | 100 |
MS.gene41566.t1 | MTR_1g025780 | 29.204 | 339 | 186 | 15 | 30 | 339 | 41 | 354 | 3.82e-23 | 99.4 |
MS.gene41566.t1 | MTR_5g078210 | 28.097 | 331 | 178 | 13 | 32 | 330 | 27 | 329 | 1.15e-22 | 97.8 |
MS.gene41566.t1 | MTR_5g022640 | 27.606 | 355 | 217 | 11 | 7 | 339 | 23 | 359 | 1.72e-22 | 97.4 |
MS.gene41566.t1 | MTR_8g075200 | 26.954 | 371 | 223 | 12 | 1 | 339 | 2 | 356 | 2.12e-22 | 97.8 |
MS.gene41566.t1 | MTR_8g031390 | 30.508 | 295 | 159 | 13 | 26 | 297 | 31 | 302 | 4.12e-22 | 95.5 |
MS.gene41566.t1 | MTR_3g052480 | 29.412 | 374 | 196 | 17 | 4 | 341 | 12 | 353 | 4.67e-22 | 96.3 |
MS.gene41566.t1 | MTR_4g056160 | 27.545 | 334 | 201 | 10 | 30 | 338 | 27 | 344 | 6.33e-22 | 95.5 |
MS.gene41566.t1 | MTR_8g079050 | 27.968 | 379 | 203 | 18 | 3 | 340 | 11 | 360 | 6.49e-22 | 95.9 |
MS.gene41566.t1 | MTR_2g100620 | 26.686 | 341 | 193 | 14 | 30 | 338 | 31 | 346 | 7.22e-22 | 95.5 |
MS.gene41566.t1 | MTR_1g025700 | 28.099 | 363 | 213 | 15 | 5 | 339 | 22 | 364 | 8.91e-22 | 95.5 |
MS.gene41566.t1 | MTR_3g464730 | 27.874 | 348 | 200 | 14 | 20 | 339 | 20 | 344 | 5.11e-21 | 93.2 |
MS.gene41566.t1 | MTR_4g087985 | 26.254 | 339 | 214 | 10 | 30 | 340 | 36 | 366 | 6.96e-21 | 92.8 |
MS.gene41566.t1 | MTR_5g078210 | 28.443 | 334 | 167 | 12 | 32 | 335 | 27 | 318 | 8.09e-21 | 92.0 |
MS.gene41566.t1 | MTR_2g033920 | 27.139 | 339 | 200 | 11 | 29 | 340 | 34 | 352 | 1.22e-20 | 92.0 |
MS.gene41566.t1 | MTR_5g084790 | 26.431 | 367 | 224 | 13 | 2 | 343 | 6 | 351 | 3.19e-20 | 90.9 |
MS.gene41566.t1 | MTR_3g082830 | 24.850 | 334 | 217 | 9 | 30 | 343 | 38 | 357 | 9.10e-20 | 89.7 |
MS.gene41566.t1 | MTR_2g015080 | 24.796 | 367 | 219 | 16 | 1 | 333 | 13 | 356 | 9.63e-20 | 89.7 |
MS.gene41566.t1 | MTR_4g035353 | 24.490 | 343 | 227 | 8 | 18 | 341 | 19 | 348 | 1.29e-19 | 89.4 |
MS.gene41566.t1 | MTR_8g075220 | 26.525 | 377 | 222 | 13 | 1 | 339 | 1 | 360 | 2.94e-19 | 88.2 |
MS.gene41566.t1 | MTR_5g093090 | 25.000 | 368 | 216 | 13 | 6 | 340 | 6 | 346 | 4.20e-19 | 87.8 |
MS.gene41566.t1 | MTR_1g025910 | 26.667 | 330 | 196 | 14 | 35 | 339 | 41 | 349 | 5.54e-19 | 87.4 |
MS.gene41566.t1 | MTR_3g114090 | 30.267 | 337 | 191 | 15 | 28 | 339 | 34 | 351 | 5.55e-19 | 87.4 |
MS.gene41566.t1 | MTR_5g084750 | 27.485 | 342 | 198 | 14 | 30 | 343 | 30 | 349 | 1.45e-18 | 85.9 |
MS.gene41566.t1 | MTR_1g060490 | 28.173 | 323 | 186 | 15 | 27 | 329 | 34 | 330 | 1.90e-18 | 85.5 |
MS.gene41566.t1 | MTR_8g022790 | 25.664 | 339 | 194 | 11 | 30 | 340 | 37 | 345 | 3.91e-18 | 84.7 |
MS.gene41566.t1 | MTR_3g021460 | 24.518 | 363 | 218 | 11 | 2 | 340 | 5 | 335 | 4.94e-18 | 84.3 |
MS.gene41566.t1 | MTR_5g084770 | 27.424 | 361 | 214 | 14 | 3 | 338 | 6 | 343 | 1.74e-17 | 82.8 |
MS.gene41566.t1 | MTR_3g005660 | 27.327 | 333 | 193 | 13 | 32 | 335 | 38 | 350 | 1.85e-17 | 83.2 |
MS.gene41566.t1 | MTR_8g022810 | 32.735 | 223 | 123 | 10 | 2 | 205 | 17 | 231 | 2.36e-17 | 82.0 |
MS.gene41566.t1 | MTR_7g116520 | 26.301 | 346 | 193 | 15 | 29 | 340 | 33 | 350 | 2.62e-17 | 82.4 |
MS.gene41566.t1 | MTR_2g461580 | 24.571 | 350 | 216 | 10 | 2 | 331 | 5 | 326 | 2.88e-17 | 82.4 |
MS.gene41566.t1 | MTR_0009s0250 | 25.588 | 340 | 215 | 12 | 30 | 354 | 33 | 349 | 3.88e-17 | 82.0 |
MS.gene41566.t1 | MTR_3g114120 | 27.515 | 338 | 184 | 16 | 30 | 334 | 47 | 356 | 3.20e-16 | 79.3 |
MS.gene41566.t1 | MTR_0565s0010 | 24.620 | 329 | 204 | 11 | 32 | 335 | 34 | 343 | 7.31e-16 | 78.2 |
MS.gene41566.t1 | MTR_1g060500 | 27.356 | 329 | 189 | 16 | 27 | 329 | 37 | 341 | 2.31e-15 | 76.6 |
MS.gene41566.t1 | MTR_3g435540 | 25.521 | 384 | 223 | 16 | 4 | 350 | 3 | 360 | 2.74e-15 | 76.6 |
MS.gene41566.t1 | MTR_1g092750 | 25.649 | 308 | 196 | 11 | 31 | 324 | 41 | 329 | 2.75e-15 | 76.6 |
MS.gene41566.t1 | MTR_3g023220 | 25.602 | 332 | 178 | 14 | 31 | 331 | 34 | 327 | 5.39e-15 | 75.5 |
MS.gene41566.t1 | MTR_1g024890 | 25.369 | 339 | 217 | 9 | 23 | 340 | 25 | 348 | 5.56e-15 | 75.9 |
MS.gene41566.t1 | MTR_4g108690 | 25.526 | 333 | 204 | 12 | 32 | 339 | 29 | 342 | 1.24e-14 | 74.7 |
MS.gene41566.t1 | MTR_1g092760 | 24.272 | 309 | 198 | 11 | 31 | 324 | 40 | 327 | 5.75e-14 | 72.4 |
MS.gene41566.t1 | MTR_7g116570 | 23.392 | 342 | 220 | 11 | 29 | 345 | 33 | 357 | 1.11e-13 | 71.6 |
MS.gene41566.t1 | MTR_4g019880 | 24.119 | 369 | 220 | 15 | 2 | 340 | 12 | 350 | 1.36e-13 | 71.6 |
MS.gene41566.t1 | MTR_5g087690 | 25.000 | 336 | 208 | 13 | 22 | 336 | 44 | 356 | 1.72e-13 | 71.2 |
MS.gene41566.t1 | MTR_7g104220 | 25.466 | 322 | 189 | 13 | 31 | 329 | 43 | 336 | 2.17e-13 | 70.9 |
MS.gene41566.t1 | MTR_1g079540 | 23.837 | 344 | 220 | 9 | 27 | 345 | 28 | 354 | 4.70e-13 | 70.1 |
MS.gene41566.t1 | MTR_1108s0010 | 33.784 | 148 | 86 | 4 | 191 | 338 | 68 | 203 | 1.00e-12 | 67.0 |
MS.gene41566.t1 | MTR_1g092740 | 23.171 | 328 | 208 | 12 | 31 | 337 | 39 | 343 | 1.08e-12 | 68.6 |
MS.gene41566.t1 | MTR_2g033920 | 25.735 | 272 | 169 | 8 | 29 | 277 | 34 | 295 | 2.10e-12 | 67.4 |
MS.gene41566.t1 | MTR_1g082410 | 26.158 | 367 | 175 | 19 | 3 | 347 | 12 | 304 | 2.32e-12 | 67.4 |
MS.gene41566.t1 | MTR_8g087870 | 26.923 | 286 | 165 | 11 | 31 | 293 | 30 | 294 | 4.91e-12 | 66.6 |
MS.gene41566.t1 | MTR_2g017955 | 28.384 | 229 | 133 | 8 | 2 | 206 | 7 | 228 | 2.95e-11 | 64.7 |
MS.gene41566.t1 | MTR_2g017925 | 25.212 | 353 | 207 | 13 | 4 | 331 | 9 | 329 | 8.74e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene41566.t1 | AT5G45910 | 43.850 | 374 | 178 | 11 | 1 | 346 | 1 | 370 | 7.02e-93 | 282 |
MS.gene41566.t1 | AT2G27360 | 42.274 | 343 | 168 | 9 | 28 | 345 | 31 | 368 | 2.54e-81 | 253 |
MS.gene41566.t1 | AT1G31550 | 41.349 | 341 | 172 | 9 | 28 | 345 | 34 | 369 | 6.80e-80 | 249 |
MS.gene41566.t1 | AT1G28590 | 39.710 | 345 | 179 | 8 | 28 | 348 | 34 | 373 | 8.29e-77 | 242 |
MS.gene41566.t1 | AT1G28610 | 40.988 | 344 | 169 | 10 | 29 | 346 | 30 | 365 | 1.02e-76 | 241 |
MS.gene41566.t1 | AT1G28600 | 40.000 | 355 | 184 | 9 | 15 | 345 | 15 | 364 | 1.88e-76 | 241 |
MS.gene41566.t1 | AT1G31550 | 40.762 | 341 | 171 | 10 | 28 | 345 | 34 | 366 | 4.88e-76 | 239 |
MS.gene41566.t1 | AT1G28670 | 39.130 | 345 | 180 | 8 | 28 | 347 | 33 | 372 | 1.12e-75 | 238 |
MS.gene41566.t1 | AT1G28570 | 38.251 | 366 | 194 | 9 | 4 | 345 | 11 | 368 | 1.46e-74 | 236 |
MS.gene41566.t1 | AT1G28640 | 38.372 | 344 | 183 | 8 | 28 | 347 | 33 | 371 | 1.97e-73 | 233 |
MS.gene41566.t1 | AT1G28660 | 38.841 | 345 | 180 | 9 | 28 | 347 | 33 | 371 | 6.11e-73 | 231 |
MS.gene41566.t1 | AT1G28580 | 36.164 | 365 | 204 | 8 | 5 | 345 | 12 | 371 | 1.12e-72 | 231 |
MS.gene41566.t1 | AT1G28660 | 38.841 | 345 | 179 | 10 | 28 | 347 | 33 | 370 | 4.73e-72 | 229 |
MS.gene41566.t1 | AT1G28650 | 38.841 | 345 | 180 | 9 | 28 | 347 | 35 | 373 | 9.30e-72 | 228 |
MS.gene41566.t1 | AT3G48460 | 33.152 | 368 | 205 | 11 | 8 | 345 | 12 | 368 | 9.57e-59 | 194 |
MS.gene41566.t1 | AT1G28570 | 33.811 | 349 | 161 | 9 | 4 | 345 | 11 | 296 | 4.00e-54 | 181 |
MS.gene41566.t1 | AT1G28580 | 34.364 | 291 | 165 | 7 | 76 | 345 | 5 | 290 | 9.16e-54 | 179 |
MS.gene41566.t1 | AT4G01130 | 33.048 | 351 | 192 | 12 | 28 | 345 | 32 | 372 | 7.25e-49 | 169 |
MS.gene41566.t1 | AT1G56670 | 31.421 | 366 | 211 | 10 | 4 | 345 | 14 | 363 | 4.98e-47 | 164 |
MS.gene41566.t1 | AT1G54790 | 32.213 | 357 | 192 | 13 | 25 | 345 | 27 | 369 | 6.74e-45 | 158 |
MS.gene41566.t1 | AT1G28570 | 39.000 | 200 | 115 | 4 | 150 | 345 | 9 | 205 | 3.59e-44 | 152 |
MS.gene41566.t1 | AT5G14450 | 30.986 | 355 | 197 | 11 | 28 | 347 | 39 | 380 | 3.08e-42 | 151 |
MS.gene41566.t1 | AT1G67830 | 31.519 | 349 | 191 | 11 | 21 | 333 | 21 | 357 | 6.76e-42 | 150 |
MS.gene41566.t1 | AT1G09390 | 31.694 | 366 | 210 | 11 | 4 | 345 | 11 | 360 | 2.49e-41 | 149 |
MS.gene41566.t1 | AT5G03980 | 30.499 | 341 | 175 | 8 | 15 | 337 | 14 | 310 | 2.87e-41 | 147 |
MS.gene41566.t1 | AT3G62280 | 32.036 | 334 | 195 | 10 | 31 | 345 | 37 | 357 | 4.11e-41 | 148 |
MS.gene41566.t1 | AT1G54790 | 30.239 | 377 | 217 | 13 | 1 | 345 | 6 | 368 | 5.32e-41 | 148 |
MS.gene41566.t1 | AT3G26430 | 30.056 | 356 | 201 | 11 | 28 | 347 | 29 | 372 | 2.76e-38 | 140 |
MS.gene41566.t1 | AT1G54790 | 28.822 | 399 | 220 | 14 | 1 | 345 | 6 | 394 | 4.41e-38 | 140 |
MS.gene41566.t1 | AT3G05180 | 29.429 | 350 | 201 | 12 | 28 | 343 | 34 | 371 | 7.70e-38 | 139 |
MS.gene41566.t1 | AT4G01130 | 31.868 | 273 | 157 | 7 | 28 | 277 | 32 | 298 | 6.25e-34 | 128 |
MS.gene41566.t1 | AT3G27950 | 29.024 | 379 | 210 | 12 | 6 | 347 | 8 | 364 | 1.75e-32 | 125 |
MS.gene41566.t1 | AT1G56670 | 30.743 | 296 | 171 | 7 | 4 | 277 | 14 | 297 | 2.23e-31 | 120 |
MS.gene41566.t1 | AT1G28600 | 39.286 | 196 | 95 | 6 | 15 | 188 | 15 | 208 | 4.51e-31 | 117 |
MS.gene41566.t1 | AT4G01130 | 28.669 | 293 | 169 | 10 | 86 | 345 | 1 | 286 | 4.70e-30 | 117 |
MS.gene41566.t1 | AT5G40990 | 29.348 | 368 | 213 | 13 | 6 | 341 | 6 | 358 | 8.50e-28 | 112 |
MS.gene41566.t1 | AT1G71120 | 27.134 | 328 | 206 | 10 | 30 | 340 | 31 | 342 | 2.88e-27 | 110 |
MS.gene41566.t1 | AT1G28610 | 39.888 | 178 | 78 | 7 | 29 | 182 | 30 | 202 | 9.31e-27 | 107 |
MS.gene41566.t1 | AT2G40250 | 28.487 | 337 | 191 | 14 | 27 | 333 | 33 | 349 | 1.54e-26 | 108 |
MS.gene41566.t1 | AT1G53920 | 27.394 | 376 | 233 | 13 | 3 | 354 | 19 | 378 | 8.18e-26 | 107 |
MS.gene41566.t1 | AT5G45950 | 29.794 | 339 | 178 | 15 | 30 | 338 | 40 | 348 | 1.39e-25 | 105 |
MS.gene41566.t1 | AT1G06990 | 27.297 | 370 | 220 | 15 | 3 | 342 | 6 | 356 | 1.41e-25 | 105 |
MS.gene41566.t1 | AT3G14225 | 28.235 | 340 | 198 | 12 | 30 | 341 | 37 | 358 | 5.42e-25 | 104 |
MS.gene41566.t1 | AT3G62280 | 30.682 | 264 | 157 | 7 | 31 | 277 | 37 | 291 | 5.68e-25 | 103 |
MS.gene41566.t1 | AT3G14225 | 28.070 | 342 | 200 | 12 | 30 | 341 | 37 | 362 | 5.98e-25 | 104 |
MS.gene41566.t1 | AT1G23500 | 26.796 | 362 | 208 | 12 | 5 | 340 | 9 | 339 | 1.49e-24 | 102 |
MS.gene41566.t1 | AT4G10950 | 26.549 | 339 | 208 | 10 | 26 | 340 | 66 | 387 | 3.04e-24 | 102 |
MS.gene41566.t1 | AT1G53940 | 30.409 | 342 | 188 | 15 | 30 | 341 | 39 | 360 | 8.82e-24 | 101 |
MS.gene41566.t1 | AT1G73610 | 27.381 | 336 | 187 | 13 | 29 | 339 | 34 | 337 | 1.66e-23 | 100 |
MS.gene41566.t1 | AT5G15720 | 25.843 | 356 | 211 | 11 | 30 | 355 | 30 | 362 | 2.62e-23 | 99.8 |
MS.gene41566.t1 | AT1G53990 | 28.142 | 366 | 212 | 15 | 3 | 341 | 8 | 349 | 2.79e-23 | 99.8 |
MS.gene41566.t1 | AT1G75920 | 29.240 | 342 | 180 | 14 | 28 | 339 | 27 | 336 | 3.27e-23 | 99.4 |
MS.gene41566.t1 | AT1G20120 | 27.353 | 340 | 206 | 10 | 28 | 342 | 76 | 399 | 4.62e-23 | 99.8 |
MS.gene41566.t1 | AT2G31540 | 27.005 | 374 | 217 | 16 | 1 | 342 | 9 | 358 | 6.10e-23 | 98.6 |
MS.gene41566.t1 | AT3G16370 | 28.205 | 351 | 203 | 14 | 20 | 343 | 22 | 350 | 7.81e-23 | 98.2 |
MS.gene41566.t1 | AT1G20132 | 28.402 | 338 | 192 | 12 | 30 | 339 | 61 | 376 | 1.06e-22 | 98.2 |
MS.gene41566.t1 | AT5G03820 | 27.224 | 371 | 212 | 16 | 1 | 338 | 4 | 349 | 2.26e-22 | 97.1 |
MS.gene41566.t1 | AT5G03820 | 27.493 | 371 | 211 | 17 | 1 | 338 | 32 | 377 | 4.12e-22 | 96.7 |
MS.gene41566.t1 | AT2G30310 | 26.705 | 352 | 219 | 13 | 4 | 333 | 11 | 345 | 8.25e-22 | 95.5 |
MS.gene41566.t1 | AT1G71250 | 25.826 | 333 | 211 | 9 | 30 | 341 | 41 | 358 | 1.08e-21 | 95.5 |
MS.gene41566.t1 | AT4G10950 | 26.254 | 339 | 205 | 11 | 26 | 340 | 66 | 383 | 1.30e-21 | 95.5 |
MS.gene41566.t1 | AT1G75890 | 27.711 | 332 | 187 | 13 | 30 | 331 | 47 | 355 | 1.91e-21 | 94.4 |
MS.gene41566.t1 | AT1G75890 | 27.711 | 332 | 187 | 13 | 30 | 331 | 76 | 384 | 4.18e-21 | 94.0 |
MS.gene41566.t1 | AT2G42990 | 26.074 | 349 | 221 | 11 | 7 | 334 | 6 | 338 | 5.67e-21 | 92.8 |
MS.gene41566.t1 | AT1G75880 | 27.327 | 333 | 202 | 13 | 30 | 339 | 52 | 367 | 8.22e-21 | 92.8 |
MS.gene41566.t1 | AT2G19060 | 27.763 | 371 | 208 | 17 | 2 | 345 | 4 | 341 | 9.12e-21 | 92.4 |
MS.gene41566.t1 | AT1G58430 | 26.061 | 330 | 204 | 12 | 28 | 333 | 33 | 346 | 1.46e-20 | 92.0 |
MS.gene41566.t1 | AT5G63170 | 27.217 | 327 | 180 | 13 | 30 | 330 | 28 | 322 | 2.82e-20 | 90.9 |
MS.gene41566.t1 | AT1G75880 | 28.144 | 334 | 199 | 14 | 30 | 339 | 52 | 368 | 4.00e-20 | 90.9 |
MS.gene41566.t1 | AT1G20135 | 24.930 | 357 | 203 | 13 | 3 | 333 | 9 | 326 | 4.28e-20 | 90.1 |
MS.gene41566.t1 | AT1G75890 | 26.629 | 353 | 193 | 14 | 30 | 339 | 47 | 376 | 5.97e-20 | 90.5 |
MS.gene41566.t1 | AT1G75920 | 27.762 | 353 | 186 | 13 | 28 | 339 | 22 | 346 | 6.15e-20 | 90.1 |
MS.gene41566.t1 | AT1G75920 | 28.763 | 299 | 164 | 11 | 64 | 339 | 36 | 308 | 8.91e-20 | 89.0 |
MS.gene41566.t1 | AT1G75910 | 26.099 | 364 | 204 | 15 | 9 | 339 | 5 | 336 | 1.68e-19 | 88.6 |
MS.gene41566.t1 | AT1G75900 | 28.783 | 337 | 189 | 14 | 30 | 338 | 43 | 356 | 3.33e-19 | 88.2 |
MS.gene41566.t1 | AT2G24560 | 25.862 | 348 | 221 | 14 | 4 | 330 | 11 | 342 | 5.13e-19 | 87.4 |
MS.gene41566.t1 | AT5G42170 | 28.571 | 336 | 189 | 15 | 30 | 338 | 50 | 361 | 5.73e-19 | 87.4 |
MS.gene41566.t1 | AT2G03980 | 25.680 | 331 | 194 | 12 | 28 | 330 | 41 | 347 | 7.29e-19 | 87.0 |
MS.gene41566.t1 | AT2G03980 | 25.680 | 331 | 194 | 12 | 28 | 330 | 41 | 347 | 7.29e-19 | 87.0 |
MS.gene41566.t1 | AT2G03980 | 25.680 | 331 | 194 | 12 | 28 | 330 | 41 | 347 | 7.29e-19 | 87.0 |
MS.gene41566.t1 | AT2G03980 | 25.680 | 331 | 194 | 12 | 28 | 330 | 41 | 347 | 7.29e-19 | 87.0 |
MS.gene41566.t1 | AT2G30220 | 25.568 | 352 | 222 | 12 | 4 | 333 | 11 | 344 | 7.47e-19 | 87.0 |
MS.gene41566.t1 | AT1G54020 | 25.806 | 341 | 214 | 13 | 6 | 331 | 8 | 324 | 7.76e-19 | 87.0 |
MS.gene41566.t1 | AT1G20130 | 26.627 | 338 | 205 | 11 | 30 | 339 | 204 | 526 | 8.15e-19 | 88.2 |
MS.gene41566.t1 | AT1G59406 | 27.248 | 367 | 214 | 14 | 1 | 339 | 1 | 342 | 9.13e-19 | 86.7 |
MS.gene41566.t1 | AT1G59030 | 27.248 | 367 | 214 | 14 | 1 | 339 | 1 | 342 | 9.13e-19 | 86.7 |
MS.gene41566.t1 | AT1G58725 | 27.248 | 367 | 214 | 14 | 1 | 339 | 1 | 342 | 9.13e-19 | 86.7 |
MS.gene41566.t1 | AT5G41890 | 29.023 | 348 | 187 | 15 | 32 | 340 | 33 | 359 | 1.08e-18 | 86.7 |
MS.gene41566.t1 | AT1G75930 | 29.080 | 337 | 185 | 14 | 28 | 338 | 27 | 335 | 1.09e-18 | 86.3 |
MS.gene41566.t1 | AT1G20130 | 26.627 | 338 | 205 | 11 | 30 | 339 | 184 | 506 | 1.16e-18 | 87.4 |
MS.gene41566.t1 | AT3G14820 | 27.893 | 337 | 189 | 13 | 30 | 338 | 32 | 342 | 2.03e-18 | 85.5 |
MS.gene41566.t1 | AT3G50400 | 26.992 | 389 | 198 | 19 | 3 | 340 | 5 | 358 | 6.05e-18 | 84.7 |
MS.gene41566.t1 | AT5G15720 | 26.259 | 278 | 160 | 8 | 30 | 277 | 30 | 292 | 6.19e-18 | 84.0 |
MS.gene41566.t1 | AT4G28780 | 27.221 | 349 | 198 | 16 | 29 | 345 | 30 | 354 | 8.14e-18 | 84.0 |
MS.gene41566.t1 | AT5G08460 | 26.332 | 319 | 182 | 12 | 4 | 291 | 27 | 323 | 8.24e-18 | 84.3 |
MS.gene41566.t1 | AT4G26790 | 25.000 | 332 | 215 | 10 | 28 | 339 | 27 | 344 | 3.90e-17 | 82.0 |
MS.gene41566.t1 | AT4G26790 | 25.000 | 332 | 215 | 10 | 28 | 339 | 27 | 344 | 3.90e-17 | 82.0 |
MS.gene41566.t1 | AT2G19010 | 27.545 | 334 | 196 | 13 | 32 | 345 | 32 | 339 | 5.31e-17 | 81.6 |
MS.gene41566.t1 | AT2G19010 | 27.545 | 334 | 196 | 13 | 32 | 345 | 62 | 369 | 7.84e-17 | 81.3 |
MS.gene41566.t1 | AT1G33811 | 27.371 | 369 | 212 | 18 | 1 | 335 | 4 | 350 | 9.04e-17 | 80.9 |
MS.gene41566.t1 | AT3G53100 | 24.405 | 336 | 206 | 12 | 30 | 338 | 29 | 343 | 1.30e-16 | 80.5 |
MS.gene41566.t1 | AT5G37690 | 25.076 | 331 | 202 | 12 | 32 | 337 | 29 | 338 | 1.70e-16 | 80.1 |
MS.gene41566.t1 | AT3G04290 | 25.833 | 360 | 219 | 13 | 5 | 340 | 10 | 345 | 1.87e-16 | 80.1 |
MS.gene41566.t1 | AT5G03610 | 24.865 | 370 | 223 | 15 | 1 | 339 | 5 | 350 | 2.35e-16 | 79.7 |
MS.gene41566.t1 | AT2G19050 | 24.478 | 335 | 205 | 10 | 32 | 343 | 33 | 342 | 7.56e-16 | 78.2 |
MS.gene41566.t1 | AT4G30140 | 25.610 | 328 | 208 | 12 | 32 | 345 | 35 | 340 | 1.19e-15 | 77.4 |
MS.gene41566.t1 | AT1G58520 | 26.765 | 340 | 185 | 12 | 30 | 339 | 30 | 335 | 1.35e-15 | 77.4 |
MS.gene41566.t1 | AT1G58525 | 26.765 | 340 | 185 | 12 | 30 | 339 | 30 | 335 | 1.35e-15 | 77.4 |
MS.gene41566.t1 | AT5G33370 | 25.000 | 340 | 205 | 13 | 29 | 340 | 29 | 346 | 1.84e-15 | 77.0 |
MS.gene41566.t1 | AT5G55050 | 27.327 | 333 | 195 | 13 | 30 | 333 | 39 | 353 | 2.98e-15 | 76.6 |
MS.gene41566.t1 | AT5G15720 | 24.333 | 300 | 187 | 9 | 80 | 355 | 48 | 331 | 6.20e-15 | 75.5 |
MS.gene41566.t1 | AT3G09930 | 25.000 | 328 | 215 | 10 | 21 | 333 | 30 | 341 | 7.59e-15 | 75.1 |
MS.gene41566.t1 | AT3G09930 | 25.000 | 328 | 215 | 10 | 21 | 333 | 30 | 341 | 7.59e-15 | 75.1 |
MS.gene41566.t1 | AT2G36325 | 23.810 | 315 | 212 | 9 | 31 | 333 | 48 | 346 | 7.69e-15 | 75.1 |
MS.gene41566.t1 | AT1G53940 | 29.562 | 274 | 154 | 11 | 29 | 277 | 38 | 297 | 1.31e-14 | 73.9 |
MS.gene41566.t1 | AT1G75920 | 26.036 | 338 | 165 | 13 | 28 | 339 | 27 | 305 | 1.32e-13 | 71.2 |
MS.gene41566.t1 | AT3G14210 | 25.526 | 333 | 203 | 12 | 26 | 337 | 32 | 340 | 3.54e-13 | 70.5 |
MS.gene41566.t1 | AT1G54030 | 23.053 | 321 | 200 | 11 | 29 | 333 | 51 | 340 | 3.41e-12 | 67.8 |
MS.gene41566.t1 | AT5G37690 | 24.316 | 329 | 199 | 13 | 32 | 337 | 29 | 330 | 5.15e-12 | 66.6 |
MS.gene41566.t1 | AT3G43550 | 28.520 | 277 | 149 | 11 | 30 | 277 | 30 | 286 | 9.19e-12 | 65.5 |
MS.gene41566.t1 | AT5G03590 | 39.024 | 123 | 61 | 6 | 1 | 117 | 5 | 119 | 1.40e-11 | 63.5 |
MS.gene41566.t1 | AT1G53970 | 48.438 | 64 | 31 | 1 | 30 | 91 | 20 | 83 | 6.49e-11 | 58.9 |
MS.gene41566.t1 | AT1G53970 | 48.438 | 64 | 31 | 1 | 30 | 91 | 20 | 83 | 6.49e-11 | 58.9 |
MS.gene41566.t1 | AT2G31550 | 27.485 | 171 | 109 | 5 | 175 | 342 | 59 | 217 | 8.56e-11 | 61.6 |
Find 59 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTATGTCTTAGTGTCTTTA+TGG | 0.130396 | 3.1:-50461529 | None:intergenic |
ATCCTTCGAAACTAATAAAT+TGG | 0.141859 | 3.1:+50461831 | MS.gene41566:CDS |
GCGGTAGAGTTGGTGGTTTC+AGG | 0.166299 | 3.1:+50461372 | MS.gene41566:CDS |
AAAGAAGACTATGATAAATT+TGG | 0.244489 | 3.1:+50461450 | MS.gene41566:CDS |
ATGGCTGTAGGAAAACTTTA+TGG | 0.267852 | 3.1:+50460466 | MS.gene41566:CDS |
GTTGTCAAAAGCAAGATTTC+CGG | 0.336765 | 3.1:-50460434 | None:intergenic |
CCTTGAATATGCAATTTGAT+TGG | 0.379794 | 3.1:+50460927 | MS.gene41566:CDS |
TTTAATTGATTCAACAATCA+AGG | 0.383921 | 3.1:-50461194 | None:intergenic |
TCCCAAGCACCACAACAATA+TGG | 0.396989 | 3.1:+50461606 | MS.gene41566:CDS |
CACCATATTGTTGTGGTGCT+TGG | 0.401211 | 3.1:-50461608 | None:intergenic |
CCAATCAAATTGCATATTCA+AGG | 0.407925 | 3.1:-50460927 | None:intergenic |
AAATGATCATCAAAATGATA+TGG | 0.413861 | 3.1:-50461776 | None:intergenic |
ACCATATTGTTGTGGTGCTT+GGG | 0.427024 | 3.1:-50461607 | None:intergenic |
GTTTCAGGGAACTTTCCAAT+AGG | 0.428199 | 3.1:+50461387 | MS.gene41566:CDS |
TATTTGTTTATGAGCTGCTT+CGG | 0.437249 | 3.1:-50461870 | None:intergenic |
AACGTACTTTAAACATTCAT+CGG | 0.439640 | 3.1:+50460492 | MS.gene41566:CDS |
CGACTCATCATAGATTTCAT+AGG | 0.447348 | 3.1:+50460532 | MS.gene41566:CDS |
TCCTTCGAAACTAATAAATT+GGG | 0.449302 | 3.1:+50461832 | MS.gene41566:CDS |
CGGTAGAGTTGGTGGTTTCA+GGG | 0.454891 | 3.1:+50461373 | MS.gene41566:CDS |
TTTAGAGAAGGATTTGCAAA+AGG | 0.456617 | 3.1:-50461914 | None:intergenic |
AGAAGGAGCGGTAGAGTTGG+TGG | 0.458890 | 3.1:+50461365 | MS.gene41566:CDS |
CTTGATGTCAATTATTTCAA+AGG | 0.468135 | 3.1:+50460887 | MS.gene41566:CDS |
TTGTTTATAGTGGGAGAGAT+TGG | 0.468383 | 3.1:+50461112 | MS.gene41566:intron |
AAGTGAGCAGTACACCCTAT+TGG | 0.473926 | 3.1:-50461402 | None:intergenic |
TTAATTGTAGCCGAGGCGTA+TGG | 0.477134 | 3.1:+50460773 | MS.gene41566:intron |
TTTCAGGGAACTTTCCAATA+GGG | 0.477863 | 3.1:+50461388 | MS.gene41566:CDS |
TCCCAATTTATTAGTTTCGA+AGG | 0.478073 | 3.1:-50461833 | None:intergenic |
TCACAGGCTTTAATTGAAGA+AGG | 0.478739 | 3.1:+50461348 | MS.gene41566:intron |
AATATACTATCTTAGCTTGA+GGG | 0.487430 | 3.1:-50461554 | None:intergenic |
ACGTACTTTAAACATTCATC+GGG | 0.505288 | 3.1:+50460493 | MS.gene41566:CDS |
TCCTTGTGTAAAACTAAAGA+AGG | 0.509172 | 3.1:+50460968 | MS.gene41566:CDS |
TGAAGAAGGAGCGGTAGAGT+TGG | 0.509215 | 3.1:+50461362 | MS.gene41566:CDS |
AAGGCATGTTGTGGAGGAAG+TGG | 0.510426 | 3.1:+50461752 | MS.gene41566:CDS |
AAGCTGAAGATGGCTTCATA+TGG | 0.511676 | 3.1:-50460391 | None:intergenic |
TTAATTGATTCAACAATCAA+GGG | 0.514350 | 3.1:-50461193 | None:intergenic |
TAATTGTAGCCGAGGCGTAT+GGG | 0.515369 | 3.1:+50460774 | MS.gene41566:intron |
TAAGCTATCTCGAAAGAAGC+GGG | 0.516119 | 3.1:-50461938 | None:intergenic |
TTAGAGAAGGATTTGCAAAA+GGG | 0.516449 | 3.1:-50461913 | None:intergenic |
TATGAAGCCATCTTCAGCTT+CGG | 0.518684 | 3.1:+50460394 | MS.gene41566:CDS |
GCTCATAAACAAATAACTAA+AGG | 0.524203 | 3.1:+50461878 | MS.gene41566:CDS |
TTATAGTGGGAGAGATTGGT+AGG | 0.533892 | 3.1:+50461116 | MS.gene41566:intron |
TTGATGATCATTTCTGTGGA+TGG | 0.551682 | 3.1:+50461786 | MS.gene41566:CDS |
AGAGTCACCGAAGCTGAAGA+TGG | 0.567715 | 3.1:-50460401 | None:intergenic |
CTCCACACACCATATTGTTG+TGG | 0.568965 | 3.1:-50461615 | None:intergenic |
GATGTCAATTATTTCAAAGG+TGG | 0.575920 | 3.1:+50460890 | MS.gene41566:CDS |
TCATCGGGACGTTTATCAGA+TGG | 0.578128 | 3.1:+50460508 | MS.gene41566:CDS |
TCGAAACTAATAAATTGGGA+TGG | 0.581957 | 3.1:+50461836 | MS.gene41566:CDS |
AAAAGCAAGATTTCCGGTGT+CGG | 0.587575 | 3.1:-50460428 | None:intergenic |
AAATATACTATCTTAGCTTG+AGG | 0.588022 | 3.1:-50461555 | None:intergenic |
ATTAGTATCACCTTTGCATG+TGG | 0.589824 | 3.1:+50460331 | MS.gene41566:CDS |
TTTGGTATAACATACATTGG+TGG | 0.589894 | 3.1:-50461221 | None:intergenic |
CTAAGCTATCTCGAAAGAAG+CGG | 0.590135 | 3.1:-50461939 | None:intergenic |
ATAACTAAAGGTTTAATCGA+AGG | 0.596792 | 3.1:+50461890 | MS.gene41566:CDS |
GGCTTTAATTGAAGAAGGAG+CGG | 0.599772 | 3.1:+50461353 | MS.gene41566:intron |
AAATGGCAACCCATACGCCT+CGG | 0.615092 | 3.1:-50460783 | None:intergenic |
TATTACAGAACTGCGAGAGA+TGG | 0.617839 | 3.1:+50461168 | MS.gene41566:CDS |
TGAGCTGCTTCGGTAAAGTG+TGG | 0.626679 | 3.1:-50461860 | None:intergenic |
AACAAGCCACCTATGGCTGT+AGG | 0.672703 | 3.1:+50460454 | MS.gene41566:CDS |
GGTGACTCTATAACCGACAC+CGG | 0.692180 | 3.1:+50460415 | MS.gene41566:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATTTAATTGCTTAAATT+TGG | - | chr3.1:50461242-50461261 | None:intergenic | 10.0% |
!! | AAAAAATCGTTGTTTATAGT+GGG | + | chr3.1:50461103-50461122 | MS.gene41566:intron | 20.0% |
!! | AAAGAAGACTATGATAAATT+TGG | + | chr3.1:50461450-50461469 | MS.gene41566:CDS | 20.0% |
!! | AAATGATCATCAAAATGATA+TGG | - | chr3.1:50461779-50461798 | None:intergenic | 20.0% |
!! | AAATTTGGTATAACATACAT+TGG | - | chr3.1:50461227-50461246 | None:intergenic | 20.0% |
!! | CATTTATTTAATTGTTTCAC+AGG | + | chr3.1:50461332-50461351 | MS.gene41566:intron | 20.0% |
!! | TAACTTTATATCAATAATGC+AGG | + | chr3.1:50461701-50461720 | MS.gene41566:intron | 20.0% |
!!! | TTAATTGATTCAACAATCAA+GGG | - | chr3.1:50461196-50461215 | None:intergenic | 20.0% |
!!! | TTTAATTGATTCAACAATCA+AGG | - | chr3.1:50461197-50461216 | None:intergenic | 20.0% |
! | AACGTACTTTAAACATTCAT+CGG | + | chr3.1:50460492-50460511 | MS.gene41566:CDS | 25.0% |
! | ATAACTAAAGGTTTAATCGA+AGG | + | chr3.1:50461890-50461909 | MS.gene41566:CDS | 25.0% |
! | ATCCTTCGAAACTAATAAAT+TGG | + | chr3.1:50461831-50461850 | MS.gene41566:CDS | 25.0% |
! | CAAAAAATCGTTGTTTATAG+TGG | + | chr3.1:50461102-50461121 | MS.gene41566:intron | 25.0% |
! | CTTGATGTCAATTATTTCAA+AGG | + | chr3.1:50460887-50460906 | MS.gene41566:CDS | 25.0% |
! | GCTCATAAACAAATAACTAA+AGG | + | chr3.1:50461878-50461897 | MS.gene41566:CDS | 25.0% |
! | TCACACAAAAATAATATGCA+GGG | - | chr3.1:50461007-50461026 | None:intergenic | 25.0% |
! | TCCTTCGAAACTAATAAATT+GGG | + | chr3.1:50461832-50461851 | MS.gene41566:CDS | 25.0% |
! | TTCACACAAAAATAATATGC+AGG | - | chr3.1:50461008-50461027 | None:intergenic | 25.0% |
! | TTTATGTCTTAGTGTCTTTA+TGG | - | chr3.1:50461532-50461551 | None:intergenic | 25.0% |
!! | AAATATACTATCTTAGCTTG+AGG | - | chr3.1:50461558-50461577 | None:intergenic | 25.0% |
!! | AATATACTATCTTAGCTTGA+GGG | - | chr3.1:50461557-50461576 | None:intergenic | 25.0% |
!! | GGAGTAATTATTTTCTTTCT+TGG | + | chr3.1:50461634-50461653 | MS.gene41566:intron | 25.0% |
!! | TTTTACATCAACTTGACTTT+TGG | - | chr3.1:50460831-50460850 | None:intergenic | 25.0% |
!!! | AAGTCAAGTTGATGTAAAAA+AGG | + | chr3.1:50460832-50460851 | MS.gene41566:CDS | 25.0% |
!!! | ACTTTTGGTGATATTTTTGT+AGG | - | chr3.1:50460816-50460835 | None:intergenic | 25.0% |
!!! | AGTCAAGTTGATGTAAAAAA+GGG | + | chr3.1:50460833-50460852 | MS.gene41566:CDS | 25.0% |
!!! | CTTTTGGTGATATTTTTGTA+GGG | - | chr3.1:50460815-50460834 | None:intergenic | 25.0% |
AAAATAATATGCAGGGAGTT+AGG | - | chr3.1:50461000-50461019 | None:intergenic | 30.0% | |
ACGTACTTTAAACATTCATC+GGG | + | chr3.1:50460493-50460512 | MS.gene41566:CDS | 30.0% | |
CCAATCAAATTGCATATTCA+AGG | - | chr3.1:50460930-50460949 | None:intergenic | 30.0% | |
CCTTGAATATGCAATTTGAT+TGG | + | chr3.1:50460927-50460946 | MS.gene41566:CDS | 30.0% | |
GATGTCAATTATTTCAAAGG+TGG | + | chr3.1:50460890-50460909 | MS.gene41566:CDS | 30.0% | |
GTTTACTTCATTTGTAGAGT+TGG | + | chr3.1:50461292-50461311 | MS.gene41566:intron | 30.0% | |
TATTTGTTTATGAGCTGCTT+CGG | - | chr3.1:50461873-50461892 | None:intergenic | 30.0% | |
TCCTTGTGTAAAACTAAAGA+AGG | + | chr3.1:50460968-50460987 | MS.gene41566:CDS | 30.0% | |
TCGAAACTAATAAATTGGGA+TGG | + | chr3.1:50461836-50461855 | MS.gene41566:CDS | 30.0% | |
TTAGAGAAGGATTTGCAAAA+GGG | - | chr3.1:50461916-50461935 | None:intergenic | 30.0% | |
TTTAGAGAAGGATTTGCAAA+AGG | - | chr3.1:50461917-50461936 | None:intergenic | 30.0% | |
TTTGGTATAACATACATTGG+TGG | - | chr3.1:50461224-50461243 | None:intergenic | 30.0% | |
! | AAGGGAGTTAATTTTGCTTA+TGG | + | chr3.1:50460851-50460870 | MS.gene41566:CDS | 30.0% |
! | TCCCAATTTATTAGTTTCGA+AGG | - | chr3.1:50461836-50461855 | None:intergenic | 30.0% |
!! | CATTTTGATGATCATTTCTG+TGG | + | chr3.1:50461782-50461801 | MS.gene41566:CDS | 30.0% |
!!! | ACCTTCTTTAGTTTTACACA+AGG | - | chr3.1:50460972-50460991 | None:intergenic | 30.0% |
!!! | TCTTTAGTTTTACACAAGGA+GGG | - | chr3.1:50460968-50460987 | None:intergenic | 30.0% |
!!! | TTCTTTAGTTTTACACAAGG+AGG | - | chr3.1:50460969-50460988 | None:intergenic | 30.0% |
ATGGCTGTAGGAAAACTTTA+TGG | + | chr3.1:50460466-50460485 | MS.gene41566:CDS | 35.0% | |
ATTAGTATCACCTTTGCATG+TGG | + | chr3.1:50460331-50460350 | MS.gene41566:CDS | 35.0% | |
CGACTCATCATAGATTTCAT+AGG | + | chr3.1:50460532-50460551 | MS.gene41566:CDS | 35.0% | |
GTTGTCAAAAGCAAGATTTC+CGG | - | chr3.1:50460437-50460456 | None:intergenic | 35.0% | |
TACTTCATTTGTAGAGTTGG+TGG | + | chr3.1:50461295-50461314 | MS.gene41566:intron | 35.0% | |
TGTCAATTTAATTGTAGCCG+AGG | + | chr3.1:50460766-50460785 | MS.gene41566:intron | 35.0% | |
TTCAAAAATGCCACATGCAA+AGG | - | chr3.1:50460344-50460363 | None:intergenic | 35.0% | |
TTTCAGGGAACTTTCCAATA+GGG | + | chr3.1:50461388-50461407 | MS.gene41566:CDS | 35.0% | |
! | GGAGTTAATTTTGCTTATGG+TGG | + | chr3.1:50460854-50460873 | MS.gene41566:CDS | 35.0% |
! | TAAAGTTTTCCTACAGCCAT+AGG | - | chr3.1:50460466-50460485 | None:intergenic | 35.0% |
! | TCACAGGCTTTAATTGAAGA+AGG | + | chr3.1:50461348-50461367 | MS.gene41566:intron | 35.0% |
! | TGATAAGGTCGAGATTTTGA+AGG | + | chr3.1:50461733-50461752 | MS.gene41566:CDS | 35.0% |
! | TGCAGGTTTTACTTCTGATA+AGG | + | chr3.1:50461718-50461737 | MS.gene41566:intron | 35.0% |
! | TTGATGATCATTTCTGTGGA+TGG | + | chr3.1:50461786-50461805 | MS.gene41566:CDS | 35.0% |
! | TTGTTTATAGTGGGAGAGAT+TGG | + | chr3.1:50461112-50461131 | MS.gene41566:intron | 35.0% |
! | TTTTTGTAGGGCGGTAAAAA+TGG | - | chr3.1:50460803-50460822 | None:intergenic | 35.0% |
!! | TTGGTGATATTTTTGTAGGG+CGG | - | chr3.1:50460812-50460831 | None:intergenic | 35.0% |
AAAAGCAAGATTTCCGGTGT+CGG | - | chr3.1:50460431-50460450 | None:intergenic | 40.0% | |
AAGCTGAAGATGGCTTCATA+TGG | - | chr3.1:50460394-50460413 | None:intergenic | 40.0% | |
ACCATATTGTTGTGGTGCTT+GGG | - | chr3.1:50461610-50461629 | None:intergenic | 40.0% | |
CTAAGCTATCTCGAAAGAAG+CGG | - | chr3.1:50461942-50461961 | None:intergenic | 40.0% | |
GTTTCAGGGAACTTTCCAAT+AGG | + | chr3.1:50461387-50461406 | MS.gene41566:CDS | 40.0% | |
TAAGCTATCTCGAAAGAAGC+GGG | - | chr3.1:50461941-50461960 | None:intergenic | 40.0% | |
TATGAAGCCATCTTCAGCTT+CGG | + | chr3.1:50460394-50460413 | MS.gene41566:CDS | 40.0% | |
TATTACAGAACTGCGAGAGA+TGG | + | chr3.1:50461168-50461187 | MS.gene41566:CDS | 40.0% | |
! | GGCTTTAATTGAAGAAGGAG+CGG | + | chr3.1:50461353-50461372 | MS.gene41566:intron | 40.0% |
! | TTATAGTGGGAGAGATTGGT+AGG | + | chr3.1:50461116-50461135 | MS.gene41566:intron | 40.0% |
! | TTTTGACAACAAGCCACCTA+TGG | + | chr3.1:50460447-50460466 | MS.gene41566:CDS | 40.0% |
!! | ATTTTGAAGGCATGTTGTGG+AGG | + | chr3.1:50461746-50461765 | MS.gene41566:CDS | 40.0% |
!! | GAGATTTTGAAGGCATGTTG+TGG | + | chr3.1:50461743-50461762 | MS.gene41566:CDS | 40.0% |
!!! | AAAGAAGCGGGTTTTAGAGA+AGG | - | chr3.1:50461929-50461948 | None:intergenic | 40.0% |
AAGTGAGCAGTACACCCTAT+TGG | - | chr3.1:50461405-50461424 | None:intergenic | 45.0% | |
CACCACAACAATATGGTGTG+TGG | + | chr3.1:50461613-50461632 | MS.gene41566:intron | 45.0% | |
CACCATATTGTTGTGGTGCT+TGG | - | chr3.1:50461611-50461630 | None:intergenic | 45.0% | |
CTCCACACACCATATTGTTG+TGG | - | chr3.1:50461618-50461637 | None:intergenic | 45.0% | |
TAATTGTAGCCGAGGCGTAT+GGG | + | chr3.1:50460774-50460793 | MS.gene41566:intron | 45.0% | |
TCATCGGGACGTTTATCAGA+TGG | + | chr3.1:50460508-50460527 | MS.gene41566:CDS | 45.0% | |
TCCCAAGCACCACAACAATA+TGG | + | chr3.1:50461606-50461625 | MS.gene41566:CDS | 45.0% | |
TTAATTGTAGCCGAGGCGTA+TGG | + | chr3.1:50460773-50460792 | MS.gene41566:intron | 45.0% | |
! | AGTTTTCCTACAGCCATAGG+TGG | - | chr3.1:50460463-50460482 | None:intergenic | 45.0% |
AAATGGCAACCCATACGCCT+CGG | - | chr3.1:50460786-50460805 | None:intergenic | 50.0% | |
AACAAGCCACCTATGGCTGT+AGG | + | chr3.1:50460454-50460473 | MS.gene41566:CDS | 50.0% | |
AAGGCATGTTGTGGAGGAAG+TGG | + | chr3.1:50461752-50461771 | MS.gene41566:CDS | 50.0% | |
AGAGTCACCGAAGCTGAAGA+TGG | - | chr3.1:50460404-50460423 | None:intergenic | 50.0% | |
GGTGACTCTATAACCGACAC+CGG | + | chr3.1:50460415-50460434 | MS.gene41566:CDS | 50.0% | |
TGAAGAAGGAGCGGTAGAGT+TGG | + | chr3.1:50461362-50461381 | MS.gene41566:CDS | 50.0% | |
TGAGCTGCTTCGGTAAAGTG+TGG | - | chr3.1:50461863-50461882 | None:intergenic | 50.0% | |
!! | CGGTAGAGTTGGTGGTTTCA+GGG | + | chr3.1:50461373-50461392 | MS.gene41566:CDS | 50.0% |
AGAAGGAGCGGTAGAGTTGG+TGG | + | chr3.1:50461365-50461384 | MS.gene41566:CDS | 55.0% | |
!! | GCGGTAGAGTTGGTGGTTTC+AGG | + | chr3.1:50461372-50461391 | MS.gene41566:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 50460313 | 50461961 | 50460313 | ID=MS.gene41566 |
chr3.1 | mRNA | 50460313 | 50461961 | 50460313 | ID=MS.gene41566.t1;Parent=MS.gene41566 |
chr3.1 | exon | 50460313 | 50460553 | 50460313 | ID=MS.gene41566.t1.exon1;Parent=MS.gene41566.t1 |
chr3.1 | CDS | 50460313 | 50460553 | 50460313 | ID=cds.MS.gene41566.t1;Parent=MS.gene41566.t1 |
chr3.1 | exon | 50460783 | 50460989 | 50460783 | ID=MS.gene41566.t1.exon2;Parent=MS.gene41566.t1 |
chr3.1 | CDS | 50460783 | 50460989 | 50460783 | ID=cds.MS.gene41566.t1;Parent=MS.gene41566.t1 |
chr3.1 | exon | 50461122 | 50461228 | 50461122 | ID=MS.gene41566.t1.exon3;Parent=MS.gene41566.t1 |
chr3.1 | CDS | 50461122 | 50461228 | 50461122 | ID=cds.MS.gene41566.t1;Parent=MS.gene41566.t1 |
chr3.1 | exon | 50461354 | 50461627 | 50461354 | ID=MS.gene41566.t1.exon4;Parent=MS.gene41566.t1 |
chr3.1 | CDS | 50461354 | 50461627 | 50461354 | ID=cds.MS.gene41566.t1;Parent=MS.gene41566.t1 |
chr3.1 | exon | 50461723 | 50461961 | 50461723 | ID=MS.gene41566.t1.exon5;Parent=MS.gene41566.t1 |
chr3.1 | CDS | 50461723 | 50461961 | 50461723 | ID=cds.MS.gene41566.t1;Parent=MS.gene41566.t1 |
Gene Sequence |
Protein sequence |