Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42328.t1 | XP_013462137.1 | 98.6 | 365 | 5 | 0 | 1 | 365 | 1 | 365 | 1.50E-204 | 721.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42328.t1 | Q55480 | 27.8 | 281 | 191 | 6 | 79 | 353 | 57 | 331 | 5.3e-20 | 100.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42328.t1 | A0A072V2T6 | 98.6 | 365 | 5 | 0 | 1 | 365 | 1 | 365 | 1.1e-204 | 721.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052732 | MS.gene42328 | 0.800369 | 1.49E-48 | -1.69E-46 |
| MS.gene053144 | MS.gene42328 | 0.840937 | 6.44E-58 | -1.69E-46 |
| MS.gene054584 | MS.gene42328 | 0.840279 | 9.57E-58 | -1.69E-46 |
| MS.gene055891 | MS.gene42328 | 0.811818 | 5.79E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42328.t1 | MTR_3g112040 | 98.630 | 365 | 5 | 0 | 1 | 365 | 1 | 365 | 0.0 | 736 |
| MS.gene42328.t1 | MTR_4g461070 | 25.688 | 327 | 211 | 14 | 27 | 333 | 12 | 326 | 2.16e-13 | 70.9 |
| MS.gene42328.t1 | MTR_1g064060 | 25.688 | 327 | 211 | 14 | 27 | 333 | 12 | 326 | 1.09e-12 | 68.6 |
| MS.gene42328.t1 | MTR_6g089480 | 27.068 | 266 | 170 | 10 | 73 | 322 | 15 | 272 | 2.80e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42328.t1 | AT1G19600 | 71.745 | 361 | 93 | 2 | 1 | 361 | 1 | 352 | 0.0 | 525 |
| MS.gene42328.t1 | AT4G27600 | 25.161 | 310 | 207 | 8 | 21 | 317 | 123 | 420 | 1.81e-13 | 71.6 |
| MS.gene42328.t1 | AT5G03300 | 26.000 | 300 | 184 | 12 | 62 | 337 | 50 | 335 | 2.78e-11 | 64.7 |
| MS.gene42328.t1 | AT5G03300 | 26.042 | 288 | 173 | 11 | 78 | 337 | 7 | 282 | 2.96e-11 | 63.9 |
| MS.gene42328.t1 | AT5G03300 | 26.042 | 288 | 173 | 11 | 78 | 337 | 7 | 282 | 2.96e-11 | 63.9 |
Find 97 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAGCCCATTGACAGTATT+TGG | 0.179071 | 3.2:-89384175 | None:intergenic |
| GGAATTTCCAGTGGAATTAT+TGG | 0.233472 | 3.2:+89381994 | MS.gene42328:CDS |
| CGCGGTCTTAGTAGCGGTTT+TGG | 0.244989 | 3.2:+89381973 | MS.gene42328:CDS |
| CTTCCACTTCTTCACCGTTT+TGG | 0.250587 | 3.2:-89381636 | None:intergenic |
| GGTCTGTCATCCGCTGTCTT+GGG | 0.266802 | 3.2:+89385019 | MS.gene42328:CDS |
| TCCTTTCTTCTTACGAAGTC+TGG | 0.272279 | 3.2:-89382085 | None:intergenic |
| CCTCCTTGTTTCCTTGGACT+TGG | 0.281953 | 3.2:+89383106 | MS.gene42328:CDS |
| GAATTTCCAGTGGAATTATT+GGG | 0.286099 | 3.2:+89381995 | MS.gene42328:CDS |
| CTTCTAAAGTTGCTGGAATC+TGG | 0.311664 | 3.2:+89383891 | MS.gene42328:CDS |
| AGAATCAGCCGAATTAGATT+TGG | 0.313667 | 3.2:-89381905 | None:intergenic |
| GGAAGGCCTCCTTGTTTCCT+TGG | 0.333006 | 3.2:+89383100 | MS.gene42328:CDS |
| GTTAATAACATGTCCTCTAA+TGG | 0.333970 | 3.2:+89382051 | MS.gene42328:CDS |
| GGGTCTGTCATCCGCTGTCT+TGG | 0.334564 | 3.2:+89385018 | MS.gene42328:CDS |
| ATCTAATTCGGCTGATTCTT+CGG | 0.362015 | 3.2:+89381909 | MS.gene42328:CDS |
| ATGATACGTGTCTCAGCTAT+AGG | 0.363253 | 3.2:+89384877 | MS.gene42328:CDS |
| ATGGAGCCGCCGGGTTCGCC+GGG | 0.363421 | 3.2:-89381742 | None:intergenic |
| CTCAAATGCTGTCAAAGTTC+AGG | 0.372122 | 3.2:+89382505 | MS.gene42328:CDS |
| GAAGCTCCTCCTTTCATCTT+GGG | 0.375802 | 3.2:+89381655 | MS.gene42328:CDS |
| TTCTTGCCAAATACTGTCAA+TGG | 0.375803 | 3.2:+89384169 | MS.gene42328:CDS |
| ACAACCACTTCTAAAGTTGC+TGG | 0.376914 | 3.2:+89383884 | MS.gene42328:CDS |
| GTGGTAACATTGGGCTCTAA+TGG | 0.381141 | 3.2:+89384195 | MS.gene42328:CDS |
| TAAATAAAATACCTCAAAAC+TGG | 0.388543 | 3.2:-89383129 | None:intergenic |
| ACAACGTGGCTCACGTTGAT+TGG | 0.397762 | 3.2:+89381701 | MS.gene42328:CDS |
| TGATACGTGTCTCAGCTATA+GGG | 0.397872 | 3.2:+89384878 | MS.gene42328:CDS |
| GGAAGCTCCTCCTTTCATCT+TGG | 0.400538 | 3.2:+89381654 | MS.gene42328:CDS |
| AATGGAGCCGCCGGGTTCGC+CGG | 0.402506 | 3.2:-89381743 | None:intergenic |
| TTCAGTTGCCTCATCCTCAT+TGG | 0.418935 | 3.2:-89383934 | None:intergenic |
| AGTTAAATCCAAATCTAATT+CGG | 0.420268 | 3.2:+89381897 | MS.gene42328:CDS |
| GTCTGTCATCCGCTGTCTTG+GGG | 0.420429 | 3.2:+89385020 | MS.gene42328:CDS |
| GGAAAGATCAACACCATTAG+AGG | 0.445924 | 3.2:-89382064 | None:intergenic |
| GTGAGGTGACGTCTGAGAAT+TGG | 0.447667 | 3.2:+89385043 | MS.gene42328:CDS |
| AGAAACTCTACAGCAGCTAT+AGG | 0.450539 | 3.2:-89384150 | None:intergenic |
| GTTTGCTTGGTAGATGAGTT+GGG | 0.451246 | 3.2:+89382458 | MS.gene42328:CDS |
| CAATGGGCTGTGGTAACATT+GGG | 0.455667 | 3.2:+89384186 | MS.gene42328:CDS |
| AGCAATTGCTTTAGCCAAGC+AGG | 0.464569 | 3.2:+89383079 | MS.gene42328:CDS |
| TCCAGACTTCGTAAGAAGAA+AGG | 0.466474 | 3.2:+89382084 | MS.gene42328:CDS |
| GCAACTGATGCTACAGGAGC+TGG | 0.467026 | 3.2:+89384910 | MS.gene42328:CDS |
| TGTTTGCTTGGTAGATGAGT+TGG | 0.468046 | 3.2:+89382457 | MS.gene42328:CDS |
| TTTGACAGCATTTGAGAGAC+AGG | 0.468071 | 3.2:-89382498 | None:intergenic |
| GATCGAATCCCCGGCGAACC+CGG | 0.472235 | 3.2:+89381733 | MS.gene42328:CDS |
| TTTCTGCCAGTGTGTTTGCT+TGG | 0.476580 | 3.2:+89382445 | MS.gene42328:intron |
| AATCATTTGCATATGCCATC+AGG | 0.476947 | 3.2:-89385108 | None:intergenic |
| AACAAGGAGGCCTTCCTGCT+TGG | 0.477864 | 3.2:-89383093 | None:intergenic |
| CTAGAAGAATGCTGCAAAGT+AGG | 0.487460 | 3.2:+89384982 | MS.gene42328:CDS |
| TCTTGCCAAATACTGTCAAT+GGG | 0.492586 | 3.2:+89384170 | MS.gene42328:CDS |
| TCCTTGCTTGATCGAATCCC+CGG | 0.497823 | 3.2:+89381724 | MS.gene42328:CDS |
| CTGCTTTGCCAATGAGGATG+AGG | 0.514676 | 3.2:+89383926 | MS.gene42328:CDS |
| TCAAAGGCAACTGATGCTAC+AGG | 0.526527 | 3.2:+89384904 | MS.gene42328:CDS |
| AGTGGAATTATTGGGGCTTG+TGG | 0.533854 | 3.2:+89382003 | MS.gene42328:CDS |
| TCAATGGGCTGTGGTAACAT+TGG | 0.536513 | 3.2:+89384185 | MS.gene42328:CDS |
| AAGGATCTTCCCACACCTGA+TGG | 0.552256 | 3.2:+89385093 | MS.gene42328:CDS |
| TTTGCATATGCCATCAGGTG+TGG | 0.552548 | 3.2:-89385103 | None:intergenic |
| AGTGTTGCTAATACAATTCG+CGG | 0.558488 | 3.2:+89381955 | MS.gene42328:CDS |
| GAACCAAAACGGTGAAGAAG+TGG | 0.558780 | 3.2:+89381633 | MS.gene42328:CDS |
| GATTCCAGCAACTTTAGAAG+TGG | 0.559177 | 3.2:-89383888 | None:intergenic |
| ACAGACGGGAATGGAGCCGC+CGG | 0.559547 | 3.2:-89381752 | None:intergenic |
| AGACCTCTGCTTTGCCAATG+AGG | 0.560816 | 3.2:+89383920 | MS.gene42328:CDS |
| AAAGTAGGCACATGCAGTGG+TGG | 0.565562 | 3.2:+89384997 | MS.gene42328:CDS |
| TCGGTGATGAAAACTCTGGC+TGG | 0.566523 | 3.2:+89381928 | MS.gene42328:CDS |
| CTCAAAACTGGCCAAGTCCA+AGG | 0.569241 | 3.2:-89383117 | None:intergenic |
| CTCAGCTATAGGGGAATCAA+AGG | 0.569436 | 3.2:+89384888 | MS.gene42328:CDS |
| GGTTGAAGACCCAAGATGAA+AGG | 0.569671 | 3.2:-89381664 | None:intergenic |
| ACAAGCCCCAATAATTCCAC+TGG | 0.570040 | 3.2:-89382001 | None:intergenic |
| GTACAAGCAGATGCAAGTAA+AGG | 0.580174 | 3.2:+89385074 | MS.gene42328:CDS |
| AATTTCCAGTGGAATTATTG+GGG | 0.586841 | 3.2:+89381996 | MS.gene42328:CDS |
| AATGGATGCATTGCTAGACA+TGG | 0.589417 | 3.2:+89384213 | MS.gene42328:CDS |
| TGGCCAAGTCCAAGGAAACA+AGG | 0.593991 | 3.2:-89383109 | None:intergenic |
| GAAGAAAGGACACACTGCAC+AGG | 0.596188 | 3.2:+89382098 | MS.gene42328:CDS |
| TTCTTCGGTGATGAAAACTC+TGG | 0.599367 | 3.2:+89381924 | MS.gene42328:CDS |
| GATACGTGTCTCAGCTATAG+GGG | 0.601517 | 3.2:+89384879 | MS.gene42328:CDS |
| TTGCATATGCCATCAGGTGT+GGG | 0.603963 | 3.2:-89385102 | None:intergenic |
| CAGACGGGAATGGAGCCGCC+GGG | 0.604311 | 3.2:-89381751 | None:intergenic |
| AGAATGAATACAGACGGGAA+TGG | 0.607999 | 3.2:-89381761 | None:intergenic |
| CATTGCTAGACATGGGAAGG+AGG | 0.610577 | 3.2:+89384221 | MS.gene42328:CDS |
| AGAGCTTGAAAATATACTGA+AGG | 0.611914 | 3.2:+89381873 | MS.gene42328:CDS |
| AAGTAGGCACATGCAGTGGT+GGG | 0.616134 | 3.2:+89384998 | MS.gene42328:CDS |
| GCCGGGGATTCGATCAAGCA+AGG | 0.617835 | 3.2:-89381725 | None:intergenic |
| TCTGTCATCCGCTGTCTTGG+GGG | 0.618671 | 3.2:+89385021 | MS.gene42328:CDS |
| TTGACAGCATTTGAGAGACA+GGG | 0.620761 | 3.2:-89382497 | None:intergenic |
| ATGCATTGCTAGACATGGGA+AGG | 0.623044 | 3.2:+89384218 | MS.gene42328:CDS |
| ACAATTCGCGGTCTTAGTAG+CGG | 0.628517 | 3.2:+89381967 | MS.gene42328:CDS |
| ACGTTGTCAACAAGTGCAGA+TGG | 0.628653 | 3.2:-89381685 | None:intergenic |
| CATCCTCATTGGCAAAGCAG+AGG | 0.630402 | 3.2:-89383923 | None:intergenic |
| CAAATACTGTCAATGGGCTG+TGG | 0.635742 | 3.2:+89384176 | MS.gene42328:CDS |
| GGCTCAAGAATTGATGACAG+AGG | 0.637655 | 3.2:+89382625 | MS.gene42328:intron |
| TGAAGACCCAAGATGAAAGG+AGG | 0.644437 | 3.2:-89381661 | None:intergenic |
| ATGGATGCATTGCTAGACAT+GGG | 0.645323 | 3.2:+89384214 | MS.gene42328:CDS |
| TGGAGCCGCCGGGTTCGCCG+GGG | 0.645437 | 3.2:-89381741 | None:intergenic |
| ATTGCTTTAGCCAAGCAGGA+AGG | 0.651155 | 3.2:+89383083 | MS.gene42328:CDS |
| TGACGTCTGAGAATTGGCAA+TGG | 0.654014 | 3.2:+89385049 | MS.gene42328:CDS |
| CGAATCCCCGGCGAACCCGG+CGG | 0.668188 | 3.2:+89381736 | MS.gene42328:CDS |
| GTGATGAAAACTCTGGCTGG+TGG | 0.671255 | 3.2:+89381931 | MS.gene42328:CDS |
| ATCTGCACTTGTTGACAACG+TGG | 0.692364 | 3.2:+89381687 | MS.gene42328:CDS |
| TGCAAAGTAGGCACATGCAG+TGG | 0.714840 | 3.2:+89384994 | MS.gene42328:CDS |
| GCTTGTGGTGATGATGAACA+AGG | 0.749640 | 3.2:+89382018 | MS.gene42328:CDS |
| CCAAGTCCAAGGAAACAAGG+AGG | 0.765177 | 3.2:-89383106 | None:intergenic |
| AGTTGGGTAACAGAACAATG+CGG | 0.811612 | 3.2:+89382474 | MS.gene42328:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAATAGTAATAATAATAA+AGG | - | chr3.2:89382821-89382840 | None:intergenic | 10.0% |
| !! | TATTAAATATTTATACTGTT+AGG | - | chr3.2:89383756-89383775 | None:intergenic | 10.0% |
| !!! | AATTACCATTAAAATTTTAT+AGG | - | chr3.2:89383281-89383300 | None:intergenic | 10.0% |
| !!! | ATATTTTATGATGAATTTTA+GGG | + | chr3.2:89384110-89384129 | MS.gene42328:intron | 10.0% |
| !!! | ATCTTTTAAAAAAAATTTTG+GGG | - | chr3.2:89383178-89383197 | None:intergenic | 10.0% |
| !!! | ATTACCATTAAAATTTTATA+GGG | - | chr3.2:89383280-89383299 | None:intergenic | 10.0% |
| !!! | CAAAATTTTTTTTAAAAGAT+TGG | + | chr3.2:89383178-89383197 | MS.gene42328:intron | 10.0% |
| !!! | CAATCTTTTAAAAAAAATTT+TGG | - | chr3.2:89383180-89383199 | None:intergenic | 10.0% |
| !!! | GTTAAAATAAAAAAAGTATT+TGG | - | chr3.2:89382414-89382433 | None:intergenic | 10.0% |
| !!! | TTTTTATTTTAACATTAACT+TGG | + | chr3.2:89382421-89382440 | MS.gene42328:intron | 10.0% |
| !! | AAAAATACACAATGAAATTA+AGG | - | chr3.2:89384061-89384080 | None:intergenic | 15.0% |
| !! | AAAGTAAATAAATTCTTTGT+AGG | + | chr3.2:89383416-89383435 | MS.gene42328:intron | 15.0% |
| !! | ACTAATAATATATCATCTAA+GGG | + | chr3.2:89382964-89382983 | MS.gene42328:intron | 15.0% |
| !! | GATATATTTATTAATTTCAG+TGG | + | chr3.2:89383012-89383031 | MS.gene42328:intron | 15.0% |
| !! | TACTAATAATATATCATCTA+AGG | + | chr3.2:89382963-89382982 | MS.gene42328:intron | 15.0% |
| !!! | AATAAAAAGTTTTCAAAACA+GGG | - | chr3.2:89383339-89383358 | None:intergenic | 15.0% |
| !!! | ATATTTTTATGTTCTTTCTT+AGG | + | chr3.2:89381840-89381859 | MS.gene42328:intron | 15.0% |
| !!! | ATGTTTTATAAATTATGCAA+AGG | - | chr3.2:89383808-89383827 | None:intergenic | 15.0% |
| !!! | GATATTTTATGATGAATTTT+AGG | + | chr3.2:89384109-89384128 | MS.gene42328:intron | 15.0% |
| !!! | TAATAAAAAGTTTTCAAAAC+AGG | - | chr3.2:89383340-89383359 | None:intergenic | 15.0% |
| !!! | TATAACTTTTTAACTCAAAA+AGG | + | chr3.2:89383564-89383583 | MS.gene42328:intron | 15.0% |
| !!! | TATTTTATGATGAATTTTAG+GGG | + | chr3.2:89384111-89384130 | MS.gene42328:intron | 15.0% |
| !!! | TGAAAACTTATAATTTTGTA+GGG | + | chr3.2:89383447-89383466 | MS.gene42328:intron | 15.0% |
| !!! | TTGAAAACTTATAATTTTGT+AGG | + | chr3.2:89383446-89383465 | MS.gene42328:intron | 15.0% |
| !! | AATATTTATACTGTTAGGAT+AGG | - | chr3.2:89383751-89383770 | None:intergenic | 20.0% |
| !! | AGAGATTCTAAATGAAAAAA+AGG | - | chr3.2:89382590-89382609 | None:intergenic | 20.0% |
| !! | AGATGATATATTATTAGTAG+CGG | - | chr3.2:89382962-89382981 | None:intergenic | 20.0% |
| !! | AGTTAAATCCAAATCTAATT+CGG | + | chr3.2:89381897-89381916 | MS.gene42328:CDS | 20.0% |
| !! | ATGATATCTTGATAAAAATC+AGG | - | chr3.2:89383999-89384018 | None:intergenic | 20.0% |
| !! | TAAATAAAATACCTCAAAAC+TGG | - | chr3.2:89383132-89383151 | None:intergenic | 20.0% |
| !! | TATTTATTAATTTCAGTGGT+TGG | + | chr3.2:89383016-89383035 | MS.gene42328:intron | 20.0% |
| !! | TCATTATTATCAGTAAAGAT+TGG | + | chr3.2:89384640-89384659 | MS.gene42328:intron | 20.0% |
| !! | TGTTATACTAACATTATAGA+CGG | - | chr3.2:89384487-89384506 | None:intergenic | 20.0% |
| !! | TTCATTGAAATATATAAGAC+AGG | - | chr3.2:89382713-89382732 | None:intergenic | 20.0% |
| !!! | CAGAGATCTTATTTTATAAA+GGG | - | chr3.2:89384433-89384452 | None:intergenic | 20.0% |
| !!! | TAGTCCCTATAAAATTTTAA+TGG | + | chr3.2:89383273-89383292 | MS.gene42328:intron | 20.0% |
| !!! | TCAGAGATCTTATTTTATAA+AGG | - | chr3.2:89384434-89384453 | None:intergenic | 20.0% |
| !!! | TGAAAACTTTTTATTAAGCA+TGG | + | chr3.2:89383344-89383363 | MS.gene42328:intron | 20.0% |
| !!! | TTTTAAAAAAAATTTTGGGG+AGG | - | chr3.2:89383175-89383194 | None:intergenic | 20.0% |
| !!! | TTTTTAACTCAAAAAGGAAA+AGG | + | chr3.2:89383570-89383589 | MS.gene42328:intron | 20.0% |
| ! | AAAATAATGATAGAAGGAAC+CGG | - | chr3.2:89384285-89384304 | None:intergenic | 25.0% |
| ! | AAAATGTGAGTTTGACATTA+TGG | - | chr3.2:89384790-89384809 | None:intergenic | 25.0% |
| ! | AAATATACCAAAGTTCTATG+AGG | + | chr3.2:89384543-89384562 | MS.gene42328:intron | 25.0% |
| ! | AAATCTTAACCTAAACACAA+AGG | - | chr3.2:89382551-89382570 | None:intergenic | 25.0% |
| ! | AATAGTAGAATGAATACAGA+CGG | - | chr3.2:89381770-89381789 | None:intergenic | 25.0% |
| ! | AATCTTAACCTAAACACAAA+GGG | - | chr3.2:89382550-89382569 | None:intergenic | 25.0% |
| ! | AGGTTTGATTAATAGAAAAC+TGG | + | chr3.2:89383207-89383226 | MS.gene42328:intron | 25.0% |
| ! | ATATCAGGGATTTAAATGAT+TGG | + | chr3.2:89382785-89382804 | MS.gene42328:intron | 25.0% |
| ! | ATCTTGATAAAAATCAGGAT+TGG | - | chr3.2:89383994-89384013 | None:intergenic | 25.0% |
| ! | CATACTAAAAAGTTTCTCTT+CGG | + | chr3.2:89382914-89382933 | MS.gene42328:intron | 25.0% |
| ! | GGTTTGATTAATAGAAAACT+GGG | + | chr3.2:89383208-89383227 | MS.gene42328:intron | 25.0% |
| ! | GTACTGTAAAATGAAAATGA+TGG | + | chr3.2:89382861-89382880 | MS.gene42328:intron | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | - | chr3.2:89382312-89382331 | None:intergenic | 25.0% |
| ! | TTACATACCACAATATTATG+AGG | - | chr3.2:89383309-89383328 | None:intergenic | 25.0% |
| !! | TGAAAACTCATGATTTTGTA+GGG | - | chr3.2:89383249-89383268 | None:intergenic | 25.0% |
| !! | TTGAAAACTCATGATTTTGT+AGG | - | chr3.2:89383250-89383269 | None:intergenic | 25.0% |
| !! | TTTTAGTCCTCATAATATTG+TGG | + | chr3.2:89383299-89383318 | MS.gene42328:intron | 25.0% |
| !!! | AATTATGTTGCTTTCATATC+AGG | + | chr3.2:89382770-89382789 | MS.gene42328:intron | 25.0% |
| !!! | AGATCTTATTTTATAAAGGG+AGG | - | chr3.2:89384430-89384449 | None:intergenic | 25.0% |
| !!! | ATCTCTTTTCTTTGTTTGAT+AGG | + | chr3.2:89382604-89382623 | MS.gene42328:intron | 25.0% |
| !!! | ATTATGTTGCTTTCATATCA+GGG | + | chr3.2:89382771-89382790 | MS.gene42328:intron | 25.0% |
| AAATAATGATAGAAGGAACC+GGG | - | chr3.2:89384284-89384303 | None:intergenic | 30.0% | |
| AACTACATCTATCATGTCAA+CGG | - | chr3.2:89384709-89384728 | None:intergenic | 30.0% | |
| AATTAAGGCAGTCAATAACT+TGG | - | chr3.2:89384046-89384065 | None:intergenic | 30.0% | |
| AATTTCCAGTGGAATTATTG+GGG | + | chr3.2:89381996-89382015 | MS.gene42328:CDS | 30.0% | |
| ACAAAAATCCACTTGCAAAA+AGG | - | chr3.2:89384939-89384958 | None:intergenic | 30.0% | |
| AGAGCTTGAAAATATACTGA+AGG | + | chr3.2:89381873-89381892 | MS.gene42328:CDS | 30.0% | |
| AGTCCCTATAAAATGCAAAT+AGG | + | chr3.2:89383388-89383407 | MS.gene42328:intron | 30.0% | |
| ATAGTAGAATGAATACAGAC+GGG | - | chr3.2:89381769-89381788 | None:intergenic | 30.0% | |
| ATGTTCAGTAATTGTTTGTG+TGG | - | chr3.2:89383643-89383662 | None:intergenic | 30.0% | |
| ATTTCACCCATTAGGAAATT+AGG | + | chr3.2:89384385-89384404 | MS.gene42328:intron | 30.0% | |
| CAAACTCCTAATTTCCTAAT+GGG | - | chr3.2:89384394-89384413 | None:intergenic | 30.0% | |
| GAACTTTGGTATATTTGAGT+TGG | - | chr3.2:89384539-89384558 | None:intergenic | 30.0% | |
| GAATTTCCAGTGGAATTATT+GGG | + | chr3.2:89381995-89382014 | MS.gene42328:CDS | 30.0% | |
| GGCCATAACATAAAAAGTAA+GGG | - | chr3.2:89382145-89382164 | None:intergenic | 30.0% | |
| GTCCCTATAAAATGCAAATA+GGG | + | chr3.2:89383389-89383408 | MS.gene42328:intron | 30.0% | |
| GTTAATAACATGTCCTCTAA+TGG | + | chr3.2:89382051-89382070 | MS.gene42328:CDS | 30.0% | |
| GTTTGCAAAGACAAGATATA+AGG | - | chr3.2:89382895-89382914 | None:intergenic | 30.0% | |
| TATTAGTCACAATGACTGTT+TGG | - | chr3.2:89382378-89382397 | None:intergenic | 30.0% | |
| TTTAGCTAATTTCACCCATT+AGG | + | chr3.2:89384377-89384396 | MS.gene42328:intron | 30.0% | |
| ! | AATATATGATAGTGCACTAG+GGG | + | chr3.2:89383725-89383744 | MS.gene42328:intron | 30.0% |
| ! | AGAAAGGAGTTGAATTTTCT+AGG | - | chr3.2:89383491-89383510 | None:intergenic | 30.0% |
| ! | AGTCCCTATTTGCATTTTAT+AGG | - | chr3.2:89383395-89383414 | None:intergenic | 30.0% |
| ! | ATCATTATTTTCCCCTCTTT+GGG | + | chr3.2:89384294-89384313 | MS.gene42328:intron | 30.0% |
| ! | CATTTTACAGTACATTGTAG+TGG | - | chr3.2:89382854-89382873 | None:intergenic | 30.0% |
| ! | CCTGTTTTATATGTTATACC+CGG | + | chr3.2:89384263-89384282 | MS.gene42328:intron | 30.0% |
| ! | GAAAGGAGTTGAATTTTCTA+GGG | - | chr3.2:89383490-89383509 | None:intergenic | 30.0% |
| ! | GAATATATGATAGTGCACTA+GGG | + | chr3.2:89383724-89383743 | MS.gene42328:intron | 30.0% |
| ! | GCATTTTATAGGGACTATAT+TGG | - | chr3.2:89383384-89383403 | None:intergenic | 30.0% |
| ! | GTCCCTATTTGCATTTTATA+GGG | - | chr3.2:89383394-89383413 | None:intergenic | 30.0% |
| ! | TATCATTATTTTCCCCTCTT+TGG | + | chr3.2:89384293-89384312 | MS.gene42328:intron | 30.0% |
| ! | TGAATATATGATAGTGCACT+AGG | + | chr3.2:89383723-89383742 | MS.gene42328:intron | 30.0% |
| ! | TTTTATAGGGACTATATTGG+AGG | - | chr3.2:89383381-89383400 | None:intergenic | 30.0% |
| !! | AAAAAAAATTTTGGGGAGGA+GGG | - | chr3.2:89383171-89383190 | None:intergenic | 30.0% |
| !! | TAAAAAAAATTTTGGGGAGG+AGG | - | chr3.2:89383172-89383191 | None:intergenic | 30.0% |
| !! | TATATTTGAGTTGGATCCAT+GGG | - | chr3.2:89384530-89384549 | None:intergenic | 30.0% |
| !! | TTGATGACAGAGGATTTTAA+AGG | + | chr3.2:89382635-89382654 | MS.gene42328:CDS | 30.0% |
| !! | TTTGCAAGTGGATTTTTGTA+CGG | + | chr3.2:89384940-89384959 | MS.gene42328:CDS | 30.0% |
| !! | TTTTAAAAGATTGGGTACAC+AGG | + | chr3.2:89383187-89383206 | MS.gene42328:intron | 30.0% |
| !!! | ATCTCTTTATTTTGGCAAGA+TGG | + | chr3.2:89383848-89383867 | MS.gene42328:intron | 30.0% |
| !!! | CTCCCTTACTTTTTATGTTA+TGG | + | chr3.2:89382140-89382159 | MS.gene42328:intron | 30.0% |
| AATCTTCCAAGTACTTACGT+CGG | + | chr3.2:89382253-89382272 | MS.gene42328:intron | 35.0% | |
| ACAGAACAATATGATCTCGT+TGG | - | chr3.2:89383690-89383709 | None:intergenic | 35.0% | |
| AGAATCAGCCGAATTAGATT+TGG | - | chr3.2:89381908-89381927 | None:intergenic | 35.0% | |
| ATATGATCTCGTTGGGAAAA+TGG | - | chr3.2:89383682-89383701 | None:intergenic | 35.0% | |
| ATTGGTCAACATTAGCATCA+TGG | + | chr3.2:89384658-89384677 | MS.gene42328:intron | 35.0% | |
| CAAAGTTCTATGAGGAATGA+GGG | + | chr3.2:89384551-89384570 | MS.gene42328:intron | 35.0% | |
| CAGAACAATATGATCTCGTT+GGG | - | chr3.2:89383689-89383708 | None:intergenic | 35.0% | |
| CATCTGACAAGTAAAACGAT+TGG | - | chr3.2:89384860-89384879 | None:intergenic | 35.0% | |
| CCAAACTCCTAATTTCCTAA+TGG | - | chr3.2:89384395-89384414 | None:intergenic | 35.0% | |
| CCATTAGGAAATTAGGAGTT+TGG | + | chr3.2:89384392-89384411 | MS.gene42328:intron | 35.0% | |
| CCGGGTATAACATATAAAAC+AGG | - | chr3.2:89384266-89384285 | None:intergenic | 35.0% | |
| GAGGGGAAAATAATGATAGA+AGG | - | chr3.2:89384291-89384310 | None:intergenic | 35.0% | |
| GGAATTTCCAGTGGAATTAT+TGG | + | chr3.2:89381994-89382013 | MS.gene42328:CDS | 35.0% | |
| GGGAGAAAAAACTACTAGAA+AGG | - | chr3.2:89383507-89383526 | None:intergenic | 35.0% | |
| GGGCCATAACATAAAAAGTA+AGG | - | chr3.2:89382146-89382165 | None:intergenic | 35.0% | |
| TCTTGCCAAATACTGTCAAT+GGG | + | chr3.2:89384170-89384189 | MS.gene42328:CDS | 35.0% | |
| TTCTTGCCAAATACTGTCAA+TGG | + | chr3.2:89384169-89384188 | MS.gene42328:CDS | 35.0% | |
| TTGGTCAACATTAGCATCAT+GGG | + | chr3.2:89384659-89384678 | MS.gene42328:intron | 35.0% | |
| TTGGTTCAGACAAAAAGCTT+CGG | - | chr3.2:89381620-89381639 | None:intergenic | 35.0% | |
| ! | AAATGAAAATGATGGTGCGT+TGG | + | chr3.2:89382869-89382888 | MS.gene42328:intron | 35.0% |
| ! | AGTGTTGCTAATACAATTCG+CGG | + | chr3.2:89381955-89381974 | MS.gene42328:CDS | 35.0% |
| ! | ATCTAATTCGGCTGATTCTT+CGG | + | chr3.2:89381909-89381928 | MS.gene42328:CDS | 35.0% |
| ! | ATGAGGCAACTGAACTTTTA+AGG | + | chr3.2:89383943-89383962 | MS.gene42328:CDS | 35.0% |
| ! | ATTTTTGTACGGAGTGGTTA+AGG | + | chr3.2:89384951-89384970 | MS.gene42328:CDS | 35.0% |
| ! | CTCTCTTGTTTATCCAAAGA+GGG | - | chr3.2:89382166-89382185 | None:intergenic | 35.0% |
| ! | GCTTTTTGTCTGAACCAAAA+CGG | + | chr3.2:89381622-89381641 | MS.gene42328:CDS | 35.0% |
| ! | TCTCTCTTGTTTATCCAAAG+AGG | - | chr3.2:89382167-89382186 | None:intergenic | 35.0% |
| ! | TTATTGACTGCAAGACACAA+TGG | + | chr3.2:89384333-89384352 | MS.gene42328:intron | 35.0% |
| ! | TTTTATGTTATGGCCCTCTT+TGG | + | chr3.2:89382150-89382169 | MS.gene42328:intron | 35.0% |
| ! | TTTTTGTACGGAGTGGTTAA+GGG | + | chr3.2:89384952-89384971 | MS.gene42328:CDS | 35.0% |
| !! | AGAGGATTTTAAAGGCTCTA+AGG | + | chr3.2:89382643-89382662 | MS.gene42328:CDS | 35.0% |
| !! | ATATTTGAGTTGGATCCATG+GGG | - | chr3.2:89384529-89384548 | None:intergenic | 35.0% |
| !! | GTATATTTGAGTTGGATCCA+TGG | - | chr3.2:89384531-89384550 | None:intergenic | 35.0% |
| !! | TCACGACGATCTCTTTATTT+TGG | + | chr3.2:89383840-89383859 | MS.gene42328:intron | 35.0% |
| !!! | TTTATTTTGGCAAGATGGTC+AGG | + | chr3.2:89383853-89383872 | MS.gene42328:intron | 35.0% |
| AATGGATGCATTGCTAGACA+TGG | + | chr3.2:89384213-89384232 | MS.gene42328:CDS | 40.0% | |
| AGAAACTCTACAGCAGCTAT+AGG | - | chr3.2:89384153-89384172 | None:intergenic | 40.0% | |
| AGAATGAATACAGACGGGAA+TGG | - | chr3.2:89381764-89381783 | None:intergenic | 40.0% | |
| AGACGGAACATTAAGCTAGT+AGG | - | chr3.2:89384470-89384489 | None:intergenic | 40.0% | |
| AGTTGGGTAACAGAACAATG+CGG | + | chr3.2:89382474-89382493 | MS.gene42328:CDS | 40.0% | |
| ATGATACGTGTCTCAGCTAT+AGG | + | chr3.2:89384877-89384896 | MS.gene42328:CDS | 40.0% | |
| ATGGATGCATTGCTAGACAT+GGG | + | chr3.2:89384214-89384233 | MS.gene42328:CDS | 40.0% | |
| CAAAATTTGCATTCTCCCCA+TGG | + | chr3.2:89384511-89384530 | MS.gene42328:intron | 40.0% | |
| CCAAAGTTCTATGAGGAATG+AGG | + | chr3.2:89384550-89384569 | MS.gene42328:intron | 40.0% | |
| CCTCATTCCTCATAGAACTT+TGG | - | chr3.2:89384553-89384572 | None:intergenic | 40.0% | |
| CTAGAAGAATGCTGCAAAGT+AGG | + | chr3.2:89384982-89385001 | MS.gene42328:CDS | 40.0% | |
| CTCAAATGCTGTCAAAGTTC+AGG | + | chr3.2:89382505-89382524 | MS.gene42328:CDS | 40.0% | |
| CTCAAGTTCCCTTTGTGTTT+AGG | + | chr3.2:89382539-89382558 | MS.gene42328:intron | 40.0% | |
| GGAAAGATCAACACCATTAG+AGG | - | chr3.2:89382067-89382086 | None:intergenic | 40.0% | |
| GGTTAACTCAACACTAGACA+TGG | + | chr3.2:89384354-89384373 | MS.gene42328:intron | 40.0% | |
| GTACAAGCAGATGCAAGTAA+AGG | + | chr3.2:89385074-89385093 | MS.gene42328:CDS | 40.0% | |
| GTCACAATGACTGTTTGGAT+TGG | - | chr3.2:89382373-89382392 | None:intergenic | 40.0% | |
| GTTTGCTTGGTAGATGAGTT+GGG | + | chr3.2:89382458-89382477 | MS.gene42328:CDS | 40.0% | |
| TATCTACCGACGTAAGTACT+TGG | - | chr3.2:89382262-89382281 | None:intergenic | 40.0% | |
| TCCAGACTTCGTAAGAAGAA+AGG | + | chr3.2:89382084-89382103 | MS.gene42328:CDS | 40.0% | |
| TCCTTTCTTCTTACGAAGTC+TGG | - | chr3.2:89382088-89382107 | None:intergenic | 40.0% | |
| TGATACGTGTCTCAGCTATA+GGG | + | chr3.2:89384878-89384897 | MS.gene42328:CDS | 40.0% | |
| TGTTTGCTTGGTAGATGAGT+TGG | + | chr3.2:89382457-89382476 | MS.gene42328:CDS | 40.0% | |
| TTAGTAGCGGTAGACCTATA+TGG | - | chr3.2:89382949-89382968 | None:intergenic | 40.0% | |
| TTCGGTATGTCCATCCATAT+AGG | + | chr3.2:89382932-89382951 | MS.gene42328:intron | 40.0% | |
| TTCTTCGGTGATGAAAACTC+TGG | + | chr3.2:89381924-89381943 | MS.gene42328:CDS | 40.0% | |
| TTGACAGCATTTGAGAGACA+GGG | - | chr3.2:89382500-89382519 | None:intergenic | 40.0% | |
| TTTGACAGCATTTGAGAGAC+AGG | - | chr3.2:89382501-89382520 | None:intergenic | 40.0% | |
| ! | ACTGAACTTTTCCCCAATGT+TGG | - | chr3.2:89384747-89384766 | None:intergenic | 40.0% |
| ! | GATTCCAGCAACTTTAGAAG+TGG | - | chr3.2:89383891-89383910 | None:intergenic | 40.0% |
| ! | TTTTTCTCCCACTTGAGCTT+GGG | + | chr3.2:89383517-89383536 | MS.gene42328:intron | 40.0% |
| !! | AAGTGGATTTTTGTACGGAG+TGG | + | chr3.2:89384945-89384964 | MS.gene42328:CDS | 40.0% |
| !! | ACAACCACTTCTAAAGTTGC+TGG | + | chr3.2:89383884-89383903 | MS.gene42328:CDS | 40.0% |
| !! | CTTCTAAAGTTGCTGGAATC+TGG | + | chr3.2:89383891-89383910 | MS.gene42328:CDS | 40.0% |
| !!! | TTTTTTCTCCCACTTGAGCT+TGG | + | chr3.2:89383516-89383535 | MS.gene42328:intron | 40.0% |
| AATGAGGGAAGGAGGTAGAA+GGG | + | chr3.2:89384566-89384585 | MS.gene42328:intron | 45.0% | |
| ACAAACTTCCCAAGCTCAAG+TGG | - | chr3.2:89383528-89383547 | None:intergenic | 45.0% | |
| ACAAGCCCCAATAATTCCAC+TGG | - | chr3.2:89382004-89382023 | None:intergenic | 45.0% | |
| ACAATTCGCGGTCTTAGTAG+CGG | + | chr3.2:89381967-89381986 | MS.gene42328:CDS | 45.0% | |
| ACGTTGTCAACAAGTGCAGA+TGG | - | chr3.2:89381688-89381707 | None:intergenic | 45.0% | |
| AGCAATTGCTTTAGCCAAGC+AGG | + | chr3.2:89383079-89383098 | MS.gene42328:CDS | 45.0% | |
| AGCACACTGTAGTCCAACAT+TGG | + | chr3.2:89384731-89384750 | MS.gene42328:intron | 45.0% | |
| AGTGGAATTATTGGGGCTTG+TGG | + | chr3.2:89382003-89382022 | MS.gene42328:CDS | 45.0% | |
| ATGCATTGCTAGACATGGGA+AGG | + | chr3.2:89384218-89384237 | MS.gene42328:CDS | 45.0% | |
| ATTGCTTTAGCCAAGCAGGA+AGG | + | chr3.2:89383083-89383102 | MS.gene42328:CDS | 45.0% | |
| CAAACTTCCCAAGCTCAAGT+GGG | - | chr3.2:89383527-89383546 | None:intergenic | 45.0% | |
| CACACTGTAGTCCAACATTG+GGG | + | chr3.2:89384733-89384752 | MS.gene42328:intron | 45.0% | |
| CACAGCCCATTGACAGTATT+TGG | - | chr3.2:89384178-89384197 | None:intergenic | 45.0% | |
| CATCTACCAAGCAAACACAC+TGG | - | chr3.2:89382454-89382473 | None:intergenic | 45.0% | |
| CTCAGCTATAGGGGAATCAA+AGG | + | chr3.2:89384888-89384907 | MS.gene42328:CDS | 45.0% | |
| GAACCAAAACGGTGAAGAAG+TGG | + | chr3.2:89381633-89381652 | MS.gene42328:CDS | 45.0% | |
| GAAGCTCCTCCTTTCATCTT+GGG | + | chr3.2:89381655-89381674 | MS.gene42328:CDS | 45.0% | |
| GATACGTGTCTCAGCTATAG+GGG | + | chr3.2:89384879-89384898 | MS.gene42328:CDS | 45.0% | |
| GCACACTGTAGTCCAACATT+GGG | + | chr3.2:89384732-89384751 | MS.gene42328:intron | 45.0% | |
| GGTTGAAGACCCAAGATGAA+AGG | - | chr3.2:89381667-89381686 | None:intergenic | 45.0% | |
| GTTCTATGAGGAATGAGGGA+AGG | + | chr3.2:89384555-89384574 | MS.gene42328:intron | 45.0% | |
| TAGCGGTAGACCTATATGGA+TGG | - | chr3.2:89382945-89382964 | None:intergenic | 45.0% | |
| TCAAAGGCAACTGATGCTAC+AGG | + | chr3.2:89384904-89384923 | MS.gene42328:CDS | 45.0% | |
| TGAAGACCCAAGATGAAAGG+AGG | - | chr3.2:89381664-89381683 | None:intergenic | 45.0% | |
| TGACGTCTGAGAATTGGCAA+TGG | + | chr3.2:89385049-89385068 | MS.gene42328:CDS | 45.0% | |
| TTCAGTTGCCTCATCCTCAT+TGG | - | chr3.2:89383937-89383956 | None:intergenic | 45.0% | |
| TTGCATATGCCATCAGGTGT+GGG | - | chr3.2:89385105-89385124 | None:intergenic | 45.0% | |
| TTTCTGCCAGTGTGTTTGCT+TGG | + | chr3.2:89382445-89382464 | MS.gene42328:intron | 45.0% | |
| TTTGCATATGCCATCAGGTG+TGG | - | chr3.2:89385106-89385125 | None:intergenic | 45.0% | |
| ! | ATCTGCACTTGTTGACAACG+TGG | + | chr3.2:89381687-89381706 | MS.gene42328:CDS | 45.0% |
| ! | CTTCCACTTCTTCACCGTTT+TGG | - | chr3.2:89381639-89381658 | None:intergenic | 45.0% |
| ! | GCTTGTGGTGATGATGAACA+AGG | + | chr3.2:89382018-89382037 | MS.gene42328:CDS | 45.0% |
| ! | GGCTCAAGAATTGATGACAG+AGG | + | chr3.2:89382625-89382644 | MS.gene42328:intron | 45.0% |
| ! | GTGGTAACATTGGGCTCTAA+TGG | + | chr3.2:89384195-89384214 | MS.gene42328:CDS | 45.0% |
| !! | CAAATACTGTCAATGGGCTG+TGG | + | chr3.2:89384176-89384195 | MS.gene42328:CDS | 45.0% |
| !! | CAATGGGCTGTGGTAACATT+GGG | + | chr3.2:89384186-89384205 | MS.gene42328:CDS | 45.0% |
| !! | TCAATGGGCTGTGGTAACAT+TGG | + | chr3.2:89384185-89384204 | MS.gene42328:CDS | 45.0% |
| !!! | AGCGGTTTTGGAATTTCCAG+TGG | + | chr3.2:89381985-89382004 | MS.gene42328:CDS | 45.0% |
| !! | AACATAATTTAAATATATAA+TGG | - | chr3.2:89382759-89382778 | None:intergenic | 5.0% |
| !!! | AAAATTTTTTTTAAAAGATT+GGG | + | chr3.2:89383179-89383198 | MS.gene42328:intron | 5.0% |
| !!! | AATCTTTTAAAAAAAATTTT+GGG | - | chr3.2:89383179-89383198 | None:intergenic | 5.0% |
| AAAGTAGGCACATGCAGTGG+TGG | + | chr3.2:89384997-89385016 | MS.gene42328:CDS | 50.0% | |
| AACTGCACGCATTCCCAAAG+AGG | - | chr3.2:89384310-89384329 | None:intergenic | 50.0% | |
| AAGGATCTTCCCACACCTGA+TGG | + | chr3.2:89385093-89385112 | MS.gene42328:CDS | 50.0% | |
| AAGTAGGCACATGCAGTGGT+GGG | + | chr3.2:89384998-89385017 | MS.gene42328:CDS | 50.0% | |
| ACAACGTGGCTCACGTTGAT+TGG | + | chr3.2:89381701-89381720 | MS.gene42328:CDS | 50.0% | |
| ACTGCACGCATTCCCAAAGA+GGG | - | chr3.2:89384309-89384328 | None:intergenic | 50.0% | |
| AGACCTCTGCTTTGCCAATG+AGG | + | chr3.2:89383920-89383939 | MS.gene42328:CDS | 50.0% | |
| CATCCTCATTGGCAAAGCAG+AGG | - | chr3.2:89383926-89383945 | None:intergenic | 50.0% | |
| CATTGCTAGACATGGGAAGG+AGG | + | chr3.2:89384221-89384240 | MS.gene42328:CDS | 50.0% | |
| CCAAGTCCAAGGAAACAAGG+AGG | - | chr3.2:89383109-89383128 | None:intergenic | 50.0% | |
| CTATGAGGAATGAGGGAAGG+AGG | + | chr3.2:89384558-89384577 | MS.gene42328:intron | 50.0% | |
| CTCAAAACTGGCCAAGTCCA+AGG | - | chr3.2:89383120-89383139 | None:intergenic | 50.0% | |
| CTGCTTTGCCAATGAGGATG+AGG | + | chr3.2:89383926-89383945 | MS.gene42328:CDS | 50.0% | |
| GAAGAAAGGACACACTGCAC+AGG | + | chr3.2:89382098-89382117 | MS.gene42328:CDS | 50.0% | |
| GAATGAGGGAAGGAGGTAGA+AGG | + | chr3.2:89384565-89384584 | MS.gene42328:intron | 50.0% | |
| GGAAGCTCCTCCTTTCATCT+TGG | + | chr3.2:89381654-89381673 | MS.gene42328:CDS | 50.0% | |
| GTGAGGTGACGTCTGAGAAT+TGG | + | chr3.2:89385043-89385062 | MS.gene42328:CDS | 50.0% | |
| GTGATGAAAACTCTGGCTGG+TGG | + | chr3.2:89381931-89381950 | MS.gene42328:CDS | 50.0% | |
| TCCTTGCTTGATCGAATCCC+CGG | + | chr3.2:89381724-89381743 | MS.gene42328:CDS | 50.0% | |
| TCGGTGATGAAAACTCTGGC+TGG | + | chr3.2:89381928-89381947 | MS.gene42328:CDS | 50.0% | |
| TGCAAAGTAGGCACATGCAG+TGG | + | chr3.2:89384994-89385013 | MS.gene42328:CDS | 50.0% | |
| TGGCCAAGTCCAAGGAAACA+AGG | - | chr3.2:89383112-89383131 | None:intergenic | 50.0% | |
| ! | AGGAGGTAGAAGGGTGTACT+CGG | + | chr3.2:89384575-89384594 | MS.gene42328:intron | 50.0% |
| ! | CCTCCTTGTTTCCTTGGACT+TGG | + | chr3.2:89383106-89383125 | MS.gene42328:CDS | 50.0% |
| ! | CTTGGACTTGGCCAGTTTTG+AGG | + | chr3.2:89383118-89383137 | MS.gene42328:CDS | 50.0% |
| ! | GCTGGAGACCTTTTTGCAAG+TGG | + | chr3.2:89384928-89384947 | MS.gene42328:CDS | 50.0% |
| AACAAGGAGGCCTTCCTGCT+TGG | - | chr3.2:89383096-89383115 | None:intergenic | 55.0% | |
| CTGCACGCATTCCCAAAGAG+GGG | - | chr3.2:89384308-89384327 | None:intergenic | 55.0% | |
| GCAACTGATGCTACAGGAGC+TGG | + | chr3.2:89384910-89384929 | MS.gene42328:CDS | 55.0% | |
| GGACACACTGCACAGGTAGT+AGG | + | chr3.2:89382105-89382124 | MS.gene42328:intron | 55.0% | |
| GGTCTGTCATCCGCTGTCTT+GGG | + | chr3.2:89385019-89385038 | MS.gene42328:CDS | 55.0% | |
| GTCTGTCATCCGCTGTCTTG+GGG | + | chr3.2:89385020-89385039 | MS.gene42328:CDS | 55.0% | |
| TCTGTCATCCGCTGTCTTGG+GGG | + | chr3.2:89385021-89385040 | MS.gene42328:CDS | 55.0% | |
| ! | CGCGGTCTTAGTAGCGGTTT+TGG | + | chr3.2:89381973-89381992 | MS.gene42328:CDS | 55.0% |
| ! | GGAAGGCCTCCTTGTTTCCT+TGG | + | chr3.2:89383100-89383119 | MS.gene42328:CDS | 55.0% |
| GCCGGGGATTCGATCAAGCA+AGG | - | chr3.2:89381728-89381747 | None:intergenic | 60.0% | |
| GGGTCTGTCATCCGCTGTCT+TGG | + | chr3.2:89385018-89385037 | MS.gene42328:CDS | 60.0% | |
| TCACCTCACCCCCAAGACAG+CGG | - | chr3.2:89385032-89385051 | None:intergenic | 60.0% | |
| ACAGACGGGAATGGAGCCGC+CGG | - | chr3.2:89381755-89381774 | None:intergenic | 65.0% | |
| CATCCGCTGTCTTGGGGGTG+AGG | + | chr3.2:89385026-89385045 | MS.gene42328:CDS | 65.0% | |
| GATCGAATCCCCGGCGAACC+CGG | + | chr3.2:89381733-89381752 | MS.gene42328:CDS | 65.0% | |
| AATGGAGCCGCCGGGTTCGC+CGG | - | chr3.2:89381746-89381765 | None:intergenic | 70.0% | |
| CAGACGGGAATGGAGCCGCC+GGG | - | chr3.2:89381754-89381773 | None:intergenic | 70.0% | |
| ATGGAGCCGCCGGGTTCGCC+GGG | - | chr3.2:89381745-89381764 | None:intergenic | 75.0% | |
| CGAATCCCCGGCGAACCCGG+CGG | + | chr3.2:89381736-89381755 | MS.gene42328:CDS | 75.0% | |
| ! | TGGAGCCGCCGGGTTCGCCG+GGG | - | chr3.2:89381744-89381763 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 89381610 | 89385128 | 89381610 | ID=MS.gene42328 |
| chr3.2 | mRNA | 89381610 | 89385128 | 89381610 | ID=MS.gene42328.t1;Parent=MS.gene42328 |
| chr3.2 | exon | 89381610 | 89381768 | 89381610 | ID=MS.gene42328.t1.exon1;Parent=MS.gene42328.t1 |
| chr3.2 | CDS | 89381610 | 89381768 | 89381610 | ID=cds.MS.gene42328.t1;Parent=MS.gene42328.t1 |
| chr3.2 | exon | 89381862 | 89382119 | 89381862 | ID=MS.gene42328.t1.exon2;Parent=MS.gene42328.t1 |
| chr3.2 | CDS | 89381862 | 89382119 | 89381862 | ID=cds.MS.gene42328.t1;Parent=MS.gene42328.t1 |
| chr3.2 | exon | 89382455 | 89382526 | 89382455 | ID=MS.gene42328.t1.exon3;Parent=MS.gene42328.t1 |
| chr3.2 | CDS | 89382455 | 89382526 | 89382455 | ID=cds.MS.gene42328.t1;Parent=MS.gene42328.t1 |
| chr3.2 | exon | 89382626 | 89382664 | 89382626 | ID=MS.gene42328.t1.exon4;Parent=MS.gene42328.t1 |
| chr3.2 | CDS | 89382626 | 89382664 | 89382626 | ID=cds.MS.gene42328.t1;Parent=MS.gene42328.t1 |
| chr3.2 | exon | 89383032 | 89383139 | 89383032 | ID=MS.gene42328.t1.exon5;Parent=MS.gene42328.t1 |
| chr3.2 | CDS | 89383032 | 89383139 | 89383032 | ID=cds.MS.gene42328.t1;Parent=MS.gene42328.t1 |
| chr3.2 | exon | 89383867 | 89383964 | 89383867 | ID=MS.gene42328.t1.exon6;Parent=MS.gene42328.t1 |
| chr3.2 | CDS | 89383867 | 89383964 | 89383867 | ID=cds.MS.gene42328.t1;Parent=MS.gene42328.t1 |
| chr3.2 | exon | 89384131 | 89384242 | 89384131 | ID=MS.gene42328.t1.exon7;Parent=MS.gene42328.t1 |
| chr3.2 | CDS | 89384131 | 89384242 | 89384131 | ID=cds.MS.gene42328.t1;Parent=MS.gene42328.t1 |
| chr3.2 | exon | 89384877 | 89385128 | 89384877 | ID=MS.gene42328.t1.exon8;Parent=MS.gene42328.t1 |
| chr3.2 | CDS | 89384877 | 89385128 | 89384877 | ID=cds.MS.gene42328.t1;Parent=MS.gene42328.t1 |
| Gene Sequence |
| Protein sequence |
