Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42344.t1 | XP_013462118.1 | 98.8 | 492 | 6 | 0 | 1 | 492 | 1 | 492 | 2.50E-266 | 927.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42344.t1 | Q8RY60 | 66.3 | 466 | 129 | 4 | 1 | 446 | 1 | 458 | 1.6e-157 | 557.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42344.t1 | A0A072V458 | 98.8 | 492 | 6 | 0 | 1 | 492 | 1 | 492 | 1.8e-266 | 927.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene064542 | MS.gene42344 | PPI |
| MS.gene42344 | MS.gene73119 | PPI |
| MS.gene035805 | MS.gene42344 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42344.t1 | MTR_3g111830 | 98.780 | 492 | 6 | 0 | 1 | 492 | 1 | 492 | 0.0 | 995 |
| MS.gene42344.t1 | MTR_4g092610 | 56.440 | 427 | 180 | 3 | 1 | 427 | 1 | 421 | 5.17e-166 | 476 |
| MS.gene42344.t1 | MTR_2g010520 | 56.440 | 427 | 184 | 1 | 1 | 427 | 1 | 425 | 1.87e-161 | 464 |
| MS.gene42344.t1 | MTR_2g010520 | 65.506 | 316 | 109 | 0 | 1 | 316 | 1 | 316 | 5.53e-149 | 429 |
| MS.gene42344.t1 | MTR_4g117360 | 50.575 | 435 | 188 | 9 | 9 | 436 | 31 | 445 | 2.10e-141 | 416 |
| MS.gene42344.t1 | MTR_6g052300 | 43.776 | 482 | 244 | 6 | 4 | 480 | 10 | 469 | 5.29e-139 | 409 |
| MS.gene42344.t1 | MTR_6g045467 | 48.724 | 431 | 182 | 6 | 9 | 434 | 27 | 423 | 1.79e-134 | 397 |
| MS.gene42344.t1 | MTR_6g045467 | 48.724 | 431 | 182 | 6 | 9 | 434 | 27 | 423 | 2.35e-134 | 397 |
| MS.gene42344.t1 | MTR_6g051860 | 57.143 | 301 | 129 | 0 | 7 | 307 | 75 | 375 | 6.80e-126 | 374 |
| MS.gene42344.t1 | MTR_6g045467 | 47.585 | 414 | 178 | 6 | 9 | 417 | 27 | 406 | 6.24e-123 | 366 |
| MS.gene42344.t1 | MTR_2g010520 | 67.568 | 259 | 84 | 0 | 1 | 259 | 1 | 259 | 1.12e-121 | 357 |
| MS.gene42344.t1 | MTR_7g094620 | 46.882 | 433 | 203 | 10 | 9 | 431 | 31 | 446 | 3.16e-117 | 353 |
| MS.gene42344.t1 | MTR_7g010900 | 41.915 | 470 | 223 | 8 | 9 | 462 | 31 | 466 | 1.41e-114 | 347 |
| MS.gene42344.t1 | MTR_6g045467 | 47.042 | 355 | 150 | 5 | 84 | 434 | 1 | 321 | 2.36e-105 | 319 |
| MS.gene42344.t1 | MTR_6g045467 | 46.761 | 355 | 151 | 5 | 84 | 434 | 4 | 324 | 2.49e-105 | 318 |
| MS.gene42344.t1 | MTR_6g045467 | 46.761 | 355 | 151 | 5 | 84 | 434 | 4 | 324 | 4.97e-105 | 318 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42344.t1 | AT1G47330 | 66.667 | 495 | 143 | 5 | 1 | 479 | 1 | 489 | 0.0 | 648 |
| MS.gene42344.t1 | AT1G47330 | 63.285 | 414 | 130 | 5 | 82 | 479 | 1 | 408 | 2.18e-178 | 508 |
| MS.gene42344.t1 | AT2G14520 | 55.581 | 439 | 157 | 4 | 1 | 427 | 1 | 413 | 4.85e-163 | 468 |
| MS.gene42344.t1 | AT2G14520 | 56.613 | 431 | 171 | 4 | 1 | 427 | 1 | 419 | 1.12e-162 | 467 |
| MS.gene42344.t1 | AT2G14520 | 56.613 | 431 | 171 | 4 | 1 | 427 | 1 | 419 | 1.12e-162 | 467 |
| MS.gene42344.t1 | AT4G33700 | 55.972 | 427 | 181 | 3 | 1 | 427 | 1 | 420 | 4.13e-159 | 458 |
| MS.gene42344.t1 | AT5G52790 | 49.550 | 444 | 178 | 3 | 2 | 441 | 3 | 404 | 1.43e-146 | 429 |
| MS.gene42344.t1 | AT5G52790 | 50.000 | 432 | 178 | 4 | 2 | 433 | 3 | 396 | 3.83e-144 | 419 |
| MS.gene42344.t1 | AT5G52790 | 49.519 | 416 | 172 | 4 | 2 | 417 | 3 | 380 | 5.95e-135 | 395 |
| MS.gene42344.t1 | AT5G52790 | 49.519 | 416 | 172 | 4 | 2 | 417 | 3 | 380 | 5.95e-135 | 395 |
| MS.gene42344.t1 | AT5G52790 | 48.931 | 421 | 169 | 3 | 2 | 418 | 3 | 381 | 2.28e-134 | 396 |
| MS.gene42344.t1 | AT4G14230 | 48.148 | 432 | 198 | 6 | 9 | 436 | 30 | 439 | 5.51e-132 | 392 |
| MS.gene42344.t1 | AT4G14240 | 48.843 | 432 | 193 | 7 | 9 | 436 | 31 | 438 | 4.46e-129 | 384 |
| MS.gene42344.t1 | AT4G33700 | 64.769 | 281 | 99 | 0 | 1 | 281 | 1 | 281 | 1.48e-128 | 375 |
| MS.gene42344.t1 | AT1G03270 | 48.506 | 435 | 188 | 10 | 9 | 431 | 29 | 439 | 4.00e-128 | 382 |
| MS.gene42344.t1 | AT4G14240 | 48.148 | 432 | 187 | 8 | 9 | 436 | 31 | 429 | 9.28e-124 | 370 |
| MS.gene42344.t1 | AT4G33700 | 53.198 | 344 | 154 | 3 | 84 | 427 | 1 | 337 | 1.86e-117 | 349 |
| MS.gene42344.t1 | AT2G14520 | 52.874 | 348 | 148 | 4 | 84 | 427 | 1 | 336 | 2.81e-116 | 346 |
| MS.gene42344.t1 | AT4G14240 | 46.927 | 358 | 163 | 6 | 82 | 436 | 1 | 334 | 3.13e-100 | 306 |
Find 105 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTCCAAAGATGAGAATT+AGG | 0.181579 | 3.2:+89270414 | None:intergenic |
| CTTAACAACTGGGAATATTT+TGG | 0.190462 | 3.2:+89270648 | None:intergenic |
| CCATTGTCATTATTGAATTC+AGG | 0.202132 | 3.2:+89269332 | None:intergenic |
| GTTACCCTAATTCTCATCTT+TGG | 0.237922 | 3.2:-89270419 | MS.gene42344:CDS |
| GTTCGCTCTCCTGCATAAAC+TGG | 0.247690 | 3.2:+89269295 | None:intergenic |
| AGCACACCTTACCTTGCTTA+TGG | 0.258974 | 3.2:+89270179 | None:intergenic |
| ACTCTTGGACTCATGTCTTT+AGG | 0.262493 | 3.2:-89270730 | MS.gene42344:CDS |
| AAGGGAAAATGCCTTTGATA+TGG | 0.302600 | 3.2:+89269471 | None:intergenic |
| CTCATGGCTGGTCTCACTCT+TGG | 0.312346 | 3.2:-89270745 | MS.gene42344:CDS |
| AGGAGAGCGAACAAACATTA+TGG | 0.326640 | 3.2:-89269284 | MS.gene42344:CDS |
| TTATGCTGCTGTCTTGATTT+CGG | 0.334551 | 3.2:-89270441 | MS.gene42344:CDS |
| AGTTAACATGAATGCTTCTA+AGG | 0.340623 | 3.2:-89267262 | MS.gene42344:CDS |
| AGATGCTGATTCTTAACAAC+TGG | 0.362278 | 3.2:+89270637 | None:intergenic |
| CCTTCTAATTTAGCAGTTCA+AGG | 0.367178 | 3.2:-89267210 | MS.gene42344:CDS |
| AAACATTATGGGACTTGTTC+TGG | 0.370883 | 3.2:-89269272 | MS.gene42344:intron |
| GCACACCTTACCTTGCTTAT+GGG | 0.393731 | 3.2:+89270180 | None:intergenic |
| TTGTACATATTGATAATCAT+AGG | 0.399731 | 3.2:-89270787 | MS.gene42344:CDS |
| AAAAGTGCTCCCTTGGATAA+AGG | 0.403057 | 3.2:-89268184 | MS.gene42344:intron |
| CTCGAAGTTCTCATCAAATC+TGG | 0.404865 | 3.2:-89270697 | MS.gene42344:CDS |
| CATTGTCATTATTGAATTCA+GGG | 0.415244 | 3.2:+89269333 | None:intergenic |
| CATATTGATAATCATAGGTT+TGG | 0.415652 | 3.2:-89270782 | MS.gene42344:CDS |
| CTCTCCAAAGATGAGAATTA+GGG | 0.416189 | 3.2:+89270415 | None:intergenic |
| TCTCTTTATGGTTGATTCAA+AGG | 0.420745 | 3.2:-89268510 | MS.gene42344:CDS |
| CAGGTGCTTGATCGGATGTT+GGG | 0.423011 | 3.2:-89269793 | MS.gene42344:CDS |
| CCACCCAACGAAGTGGTTGT+TGG | 0.425913 | 3.2:-89267830 | MS.gene42344:CDS |
| GAAAAGCTGCTCTGTTAAAG+AGG | 0.428710 | 3.2:-89269765 | MS.gene42344:CDS |
| ACTTTCCGATATTTGATCAA+TGG | 0.429420 | 3.2:+89267131 | None:intergenic |
| GATGTTGTGGAACTAAATTC+TGG | 0.432619 | 3.2:-89270810 | MS.gene42344:CDS |
| TACCACCATTGATCAAATAT+CGG | 0.434482 | 3.2:-89267136 | MS.gene42344:CDS |
| TGTAATCGAAGAGCTTCTTC+AGG | 0.437035 | 3.2:-89267789 | MS.gene42344:intron |
| CTTGCTTATGGGATAAGCTA+TGG | 0.437062 | 3.2:+89270191 | None:intergenic |
| TTAGAGTTGCATCCAAATCA+AGG | 0.438762 | 3.2:+89269452 | None:intergenic |
| TGCTTCGCTGGTCTCATGGC+TGG | 0.439945 | 3.2:-89270757 | MS.gene42344:CDS |
| ATAGGTTTGGTATGCTTCGC+TGG | 0.451471 | 3.2:-89270769 | MS.gene42344:CDS |
| GGTTGTTGGTGTTATTTCAA+TGG | 0.455509 | 3.2:-89267816 | MS.gene42344:CDS |
| TCTACAGCTACTTCTGCAAC+GGG | 0.456138 | 3.2:-89267165 | MS.gene42344:CDS |
| CCTTGAACTGCTAAATTAGA+AGG | 0.461877 | 3.2:+89267210 | None:intergenic |
| TTCAAGGGCACCGGCTATGA+TGG | 0.468114 | 3.2:+89269528 | None:intergenic |
| GGTATGCTTCGCTGGTCTCA+TGG | 0.469307 | 3.2:-89270761 | MS.gene42344:CDS |
| GGAGAGCGAACAAACATTAT+GGG | 0.473611 | 3.2:-89269283 | MS.gene42344:CDS |
| CACTTCGTTGGGTGGAAACA+CGG | 0.476023 | 3.2:+89267838 | None:intergenic |
| TCAGGTGCTTGATCGGATGT+TGG | 0.476103 | 3.2:-89269794 | MS.gene42344:intron |
| ACACCAACAACCACTTCGTT+GGG | 0.477670 | 3.2:+89267827 | None:intergenic |
| TTGTACACGATACGGATTGA+TGG | 0.481123 | 3.2:-89270265 | MS.gene42344:CDS |
| GCTGTAGAAATCGAATTAGT+TGG | 0.483806 | 3.2:+89267180 | None:intergenic |
| GATCGGAAATTCCTTAGCTA+TGG | 0.485986 | 3.2:-89270596 | MS.gene42344:CDS |
| AGGGAAAATGCCTTTGATAT+GGG | 0.486803 | 3.2:+89269472 | None:intergenic |
| TAAATCTCTACCTTTATCCA+AGG | 0.493315 | 3.2:+89268174 | None:intergenic |
| TTCAGTCAATTCAAGGGCAC+CGG | 0.499613 | 3.2:+89269519 | None:intergenic |
| TAAGAGATGGCTGCAGATGT+AGG | 0.500315 | 3.2:-89270832 | None:intergenic |
| AACACCAACAACCACTTCGT+TGG | 0.500800 | 3.2:+89267826 | None:intergenic |
| GGCTGCAACAGATTTGCATC+AGG | 0.502522 | 3.2:+89267231 | None:intergenic |
| TTGGGTGGAAACACGGGCAA+GGG | 0.503791 | 3.2:+89267845 | None:intergenic |
| CTGAATTCAATAATGACAAT+GGG | 0.509825 | 3.2:-89269331 | MS.gene42344:CDS |
| TTCTACAGCTACTTCTGCAA+CGG | 0.509991 | 3.2:-89267166 | MS.gene42344:CDS |
| TGAGGAACAACTAGAGTTCA+AGG | 0.516832 | 3.2:-89268227 | MS.gene42344:CDS |
| AGTAGAGTCCCAGTTTATGC+AGG | 0.520155 | 3.2:-89269304 | MS.gene42344:CDS |
| TTCGCTCTCCTGCATAAACT+GGG | 0.527846 | 3.2:+89269296 | None:intergenic |
| CATGAATGCTTCTAAGGAGA+AGG | 0.530301 | 3.2:-89267256 | MS.gene42344:CDS |
| TACATATGTAGGTACAGTGT+TGG | 0.530341 | 3.2:-89268002 | MS.gene42344:intron |
| CAAGGACAGCTGTAGGAACA+AGG | 0.530759 | 3.2:-89268209 | MS.gene42344:CDS |
| TGCCTTTGATATGGGAGTCA+TGG | 0.532757 | 3.2:+89269480 | None:intergenic |
| GTTGGGTGGAAACACGGGCA+AGG | 0.534220 | 3.2:+89267844 | None:intergenic |
| GAAATCAAGACAGCAGCATA+AGG | 0.534769 | 3.2:+89270443 | None:intergenic |
| AGGGAGCATTATCAAGGTCC+AGG | 0.534989 | 3.2:+89267864 | None:intergenic |
| CGGAAATTCCTTAGCTATGG+AGG | 0.535191 | 3.2:-89270593 | MS.gene42344:intron |
| TGTTGGTGTTATTTCAATGG+AGG | 0.536577 | 3.2:-89267813 | MS.gene42344:CDS |
| CAAGCTGTTTGTACACGATA+CGG | 0.539871 | 3.2:-89270273 | MS.gene42344:CDS |
| TTGCTTATGGGATAAGCTAT+GGG | 0.544758 | 3.2:+89270192 | None:intergenic |
| CTTGATCGGATGTTGGGTAA+AGG | 0.545868 | 3.2:-89269787 | MS.gene42344:CDS |
| ACTTCGTTGGGTGGAAACAC+GGG | 0.546891 | 3.2:+89267839 | None:intergenic |
| CCTGAATTCAATAATGACAA+TGG | 0.546972 | 3.2:-89269332 | MS.gene42344:CDS |
| CAGATTTGATGAGAACTTCG+AGG | 0.550852 | 3.2:+89270698 | None:intergenic |
| CGGGCAAGGGAGCATTATCA+AGG | 0.558047 | 3.2:+89267858 | None:intergenic |
| CCTAATTCTCATCTTTGGAG+AGG | 0.564389 | 3.2:-89270414 | MS.gene42344:intron |
| AAATCTCTACCTTTATCCAA+GGG | 0.565221 | 3.2:+89268175 | None:intergenic |
| TAGAGTTGCATCCAAATCAA+GGG | 0.567063 | 3.2:+89269453 | None:intergenic |
| AGGTTGTTCATATTGCATCC+TGG | 0.569511 | 3.2:-89267882 | MS.gene42344:CDS |
| TTAAAAGCAGGCGTTGCTGG+TGG | 0.574837 | 3.2:+89267917 | None:intergenic |
| CGTGTTTCCACCCAACGAAG+TGG | 0.574989 | 3.2:-89267837 | MS.gene42344:CDS |
| GATATTTGATCAATGGTGGT+AGG | 0.578278 | 3.2:+89267138 | None:intergenic |
| GCTGCAGATGTAGGATGTTG+TGG | 0.578971 | 3.2:-89270823 | MS.gene42344:CDS |
| AATTGTTACCTCCATAGCTA+AGG | 0.579727 | 3.2:+89270585 | None:intergenic |
| CCAACAACCACTTCGTTGGG+TGG | 0.582637 | 3.2:+89267830 | None:intergenic |
| TGCCATGACTCCCATATCAA+AGG | 0.585212 | 3.2:-89269482 | MS.gene42344:CDS |
| ACACGATACGGATTGATGGT+TGG | 0.586203 | 3.2:-89270261 | MS.gene42344:CDS |
| TCTGCGTAGGCTGGGAAAGG+AGG | 0.586913 | 3.2:-89269574 | MS.gene42344:intron |
| TATCGGAAAGTGAGTCACTC+AGG | 0.588739 | 3.2:-89267119 | MS.gene42344:CDS |
| TTCCGATATTTGATCAATGG+TGG | 0.589597 | 3.2:+89267134 | None:intergenic |
| TATACTGAATGAATTTCAGA+AGG | 0.592402 | 3.2:-89268320 | MS.gene42344:CDS |
| GATGAGACAACCATCATAGC+CGG | 0.601218 | 3.2:-89269538 | MS.gene42344:CDS |
| TAGAGTTCAAGGACAGCTGT+AGG | 0.603806 | 3.2:-89268216 | MS.gene42344:CDS |
| AAAAGCTGCTCTGTTAAAGA+GGG | 0.612879 | 3.2:-89269764 | MS.gene42344:CDS |
| GCGGCATGGATGCGATGTTG+AGG | 0.613691 | 3.2:+89270670 | None:intergenic |
| TCACACGATACTGTGACTGC+TGG | 0.619416 | 3.2:-89267977 | MS.gene42344:CDS |
| AAAAGAAGAACACGAACAAG+CGG | 0.620527 | 3.2:+89270225 | None:intergenic |
| GATGCTGATTCTTAACAACT+GGG | 0.626895 | 3.2:+89270638 | None:intergenic |
| TATCGTGTACAAACAGCTTG+AGG | 0.643312 | 3.2:+89270276 | None:intergenic |
| CATAGCTTATCCCATAAGCA+AGG | 0.643663 | 3.2:-89270190 | MS.gene42344:intron |
| ATCAAGACAGCAGCATAAGG+TGG | 0.647982 | 3.2:+89270446 | None:intergenic |
| ACTGCTGGTAGTAAGATTGA+CGG | 0.652137 | 3.2:-89267962 | MS.gene42344:CDS |
| AAGGACAGCTGTAGGAACAA+GGG | 0.671823 | 3.2:-89268208 | MS.gene42344:CDS |
| ATACTGAATGAATTTCAGAA+GGG | 0.676158 | 3.2:-89268319 | MS.gene42344:CDS |
| TCATTCAGTATATCATACAG+AGG | 0.709636 | 3.2:+89268331 | None:intergenic |
| GCTGGTAGTAAGATTGACGG+CGG | 0.746959 | 3.2:-89267959 | MS.gene42344:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAATATCCAAAAAAATTA+AGG | - | chr3.2:89269685-89269704 | MS.gene42344:intron | 15.0% |
| !! | CTATGATAAAAGATAAAATA+AGG | - | chr3.2:89267909-89267928 | MS.gene42344:CDS | 15.0% |
| !!! | AAATTATGGTTTTGATATTT+TGG | - | chr3.2:89269230-89269249 | MS.gene42344:intron | 15.0% |
| !!! | AATTATGGTTTTGATATTTT+GGG | - | chr3.2:89269231-89269250 | MS.gene42344:intron | 15.0% |
| !!! | TAATGGACATTATTATTAAT+CGG | + | chr3.2:89268738-89268757 | None:intergenic | 15.0% |
| !!! | TTATTTATCTATGTGATTTT+AGG | - | chr3.2:89267551-89267570 | MS.gene42344:intron | 15.0% |
| !! | ACATTATTCACTATATATCA+CGG | + | chr3.2:89268991-89269010 | None:intergenic | 20.0% |
| !! | ACCAATTCATTGTAATTTAA+TGG | - | chr3.2:89269372-89269391 | MS.gene42344:intron | 20.0% |
| !! | ATGAGATAATTTATAACAAG+AGG | + | chr3.2:89268876-89268895 | None:intergenic | 20.0% |
| !! | TGAGATAATTTATAACAAGA+GGG | + | chr3.2:89268875-89268894 | None:intergenic | 20.0% |
| !! | TTATACAAACAAGACTATAA+TGG | + | chr3.2:89267825-89267844 | None:intergenic | 20.0% |
| !! | TTATGATAGAAGACTAATAA+TGG | + | chr3.2:89268755-89268774 | None:intergenic | 20.0% |
| !!! | AAGTTGTTGATATGATTTTA+TGG | - | chr3.2:89269530-89269549 | MS.gene42344:CDS | 20.0% |
| !!! | TTGTACATATTGATAATCAT+AGG | - | chr3.2:89267149-89267168 | MS.gene42344:CDS | 20.0% |
| ! | AAAAATGAATTCAGTGAACA+AGG | + | chr3.2:89267630-89267649 | None:intergenic | 25.0% |
| ! | AAAGTGATCTAATTAAACTG+GGG | + | chr3.2:89270526-89270545 | None:intergenic | 25.0% |
| ! | ACAAAGTGATCTAATTAAAC+TGG | + | chr3.2:89270528-89270547 | None:intergenic | 25.0% |
| ! | ACAATAGCATCAAGAAAAAT+AGG | + | chr3.2:89267469-89267488 | None:intergenic | 25.0% |
| ! | ATACTGAATGAATTTCAGAA+GGG | - | chr3.2:89269617-89269636 | MS.gene42344:intron | 25.0% |
| ! | ATATGAAAAAGAATTTACCG+AGG | + | chr3.2:89269490-89269509 | None:intergenic | 25.0% |
| ! | ATCATACTATAGTAATATGC+AGG | + | chr3.2:89268093-89268112 | None:intergenic | 25.0% |
| ! | ATCCAAAAAAATTAAGGATG+AGG | - | chr3.2:89269691-89269710 | MS.gene42344:intron | 25.0% |
| ! | CAAAGTGATCTAATTAAACT+GGG | + | chr3.2:89270527-89270546 | None:intergenic | 25.0% |
| ! | CATAAACAATAATGATAGTC+AGG | + | chr3.2:89269187-89269206 | None:intergenic | 25.0% |
| ! | CATATGCATGAAATGAAAAT+TGG | - | chr3.2:89269505-89269524 | MS.gene42344:CDS | 25.0% |
| ! | CATTGTCATTATTGAATTCA+GGG | + | chr3.2:89268606-89268625 | None:intergenic | 25.0% |
| ! | CTGAATTCAATAATGACAAT+GGG | - | chr3.2:89268605-89268624 | MS.gene42344:intron | 25.0% |
| ! | GCCATTAAATTACAATGAAT+TGG | + | chr3.2:89269376-89269395 | None:intergenic | 25.0% |
| ! | TACTATTCTTGTAATCATGT+TGG | - | chr3.2:89268800-89268819 | MS.gene42344:intron | 25.0% |
| ! | TATACTGAATGAATTTCAGA+AGG | - | chr3.2:89269616-89269635 | MS.gene42344:intron | 25.0% |
| ! | TATAGTGAATAATGTTTGTG+AGG | - | chr3.2:89268996-89269015 | MS.gene42344:intron | 25.0% |
| !! | AATAAGTTGAAAACAGCTTA+TGG | - | chr3.2:89267973-89267992 | MS.gene42344:CDS | 25.0% |
| !! | AATTAGATCACTTTGTTGTA+TGG | - | chr3.2:89270532-89270551 | MS.gene42344:intron | 25.0% |
| !! | ATGAAGATTGTGATATTTTC+AGG | - | chr3.2:89268124-89268143 | MS.gene42344:intron | 25.0% |
| !! | CATATTGATAATCATAGGTT+TGG | - | chr3.2:89267154-89267173 | MS.gene42344:CDS | 25.0% |
| !! | TTACTTTGTACTCTTTTGAT+CGG | - | chr3.2:89267323-89267342 | MS.gene42344:intron | 25.0% |
| !! | TTTTCTCTGTATCCTTAATA+GGG | - | chr3.2:89269841-89269860 | MS.gene42344:intron | 25.0% |
| !! | TTTTTCACTTATATACATCC+AGG | - | chr3.2:89269396-89269415 | MS.gene42344:intron | 25.0% |
| !!! | CTATACTTTCTTGTTTTGTA+AGG | - | chr3.2:89267590-89267609 | MS.gene42344:intron | 25.0% |
| !!! | GGTTTTAAACTTACTTGTTA+TGG | + | chr3.2:89270478-89270497 | None:intergenic | 25.0% |
| !!! | TGTTTTTGAAATATCATCTG+TGG | - | chr3.2:89269818-89269837 | MS.gene42344:intron | 25.0% |
| !!! | TTAATTTTGTTTTTCTGCGT+AGG | - | chr3.2:89268349-89268368 | MS.gene42344:CDS | 25.0% |
| !!! | TTCCTCATCCTTAATTTTTT+TGG | + | chr3.2:89269696-89269715 | None:intergenic | 25.0% |
| !!! | TTTTGATGATTATCTCTTTG+AGG | - | chr3.2:89269901-89269920 | MS.gene42344:intron | 25.0% |
| AAAAACATAATGTCAACACG+AGG | + | chr3.2:89269805-89269824 | None:intergenic | 30.0% | |
| AAACAAAAGAACTTGATCAC+AGG | + | chr3.2:89268292-89268311 | None:intergenic | 30.0% | |
| AAATCTCTACCTTTATCCAA+GGG | + | chr3.2:89269764-89269783 | None:intergenic | 30.0% | |
| AAGTGATCTAATTAAACTGG+GGG | + | chr3.2:89270525-89270544 | None:intergenic | 30.0% | |
| ACAATTGCAGCAATAACAAA+TGG | + | chr3.2:89270318-89270337 | None:intergenic | 30.0% | |
| ACATACATGCATAACTATAG+TGG | + | chr3.2:89270187-89270206 | None:intergenic | 30.0% | |
| ACTTTCATAAGACCCTATTA+AGG | + | chr3.2:89269856-89269875 | None:intergenic | 30.0% | |
| ACTTTCCGATATTTGATCAA+TGG | + | chr3.2:89270808-89270827 | None:intergenic | 30.0% | |
| AGTTAACATGAATGCTTCTA+AGG | - | chr3.2:89270674-89270693 | MS.gene42344:CDS | 30.0% | |
| ATCAAATTTGTGTGCATTTC+AGG | - | chr3.2:89270415-89270434 | MS.gene42344:CDS | 30.0% | |
| ATGAGGAAATCATGATTACT+GGG | + | chr3.2:89269559-89269578 | None:intergenic | 30.0% | |
| CCAGGTTAAAAATCTCTTTA+TGG | - | chr3.2:89269414-89269433 | MS.gene42344:intron | 30.0% | |
| CCATTGTCATTATTGAATTC+AGG | + | chr3.2:89268607-89268626 | None:intergenic | 30.0% | |
| CCTGAATTCAATAATGACAA+TGG | - | chr3.2:89268604-89268623 | MS.gene42344:intron | 30.0% | |
| GTATTCAGTTTAGTGTAGTT+TGG | - | chr3.2:89270575-89270594 | MS.gene42344:intron | 30.0% | |
| TAAATCTCTACCTTTATCCA+AGG | + | chr3.2:89269765-89269784 | None:intergenic | 30.0% | |
| TACCACCATTGATCAAATAT+CGG | - | chr3.2:89270800-89270819 | MS.gene42344:CDS | 30.0% | |
| TATCGTCGTTTATTGTTAAC+AGG | - | chr3.2:89268552-89268571 | MS.gene42344:intron | 30.0% | |
| TCATTCAGTATATCATACAG+AGG | + | chr3.2:89269608-89269627 | None:intergenic | 30.0% | |
| TGATCATCAGAAAAATTCCT+CGG | - | chr3.2:89269470-89269489 | MS.gene42344:CDS | 30.0% | |
| ! | AAGACTTTTGTGGATTTTCA+TGG | - | chr3.2:89268203-89268222 | MS.gene42344:CDS | 30.0% |
| ! | AATTTTCTATTACACCACAC+AGG | + | chr3.2:89269266-89269285 | None:intergenic | 30.0% |
| ! | AGTCTTTTCAGTCAATTCAA+GGG | + | chr3.2:89268426-89268445 | None:intergenic | 30.0% |
| ! | CACAATCTTCATATTTTCAC+AGG | + | chr3.2:89268116-89268135 | None:intergenic | 30.0% |
| ! | CCATAAAGAGATTTTTAACC+TGG | + | chr3.2:89269417-89269436 | None:intergenic | 30.0% |
| ! | CTTAACAACTGGGAATATTT+TGG | + | chr3.2:89267291-89267310 | None:intergenic | 30.0% |
| ! | GTTTTCTCTGTATCCTTAAT+AGG | - | chr3.2:89269840-89269859 | MS.gene42344:intron | 30.0% |
| ! | TCTCTTTATGGTTGATTCAA+AGG | - | chr3.2:89269426-89269445 | MS.gene42344:intron | 30.0% |
| ! | TTTGAAATGCATAGTTCAAG+AGG | - | chr3.2:89268243-89268262 | MS.gene42344:CDS | 30.0% |
| !! | AAGAAAATGGATTTTCTGCA+TGG | - | chr3.2:89269302-89269321 | MS.gene42344:CDS | 30.0% |
| !! | CTGATGATCATTTTTCTTAG+AGG | + | chr3.2:89269460-89269479 | None:intergenic | 30.0% |
| !! | GTGATCAAGTTCTTTTGTTT+CGG | - | chr3.2:89268292-89268311 | MS.gene42344:CDS | 30.0% |
| !!! | ATGGTTTTGATATTTTGGGA+AGG | - | chr3.2:89269235-89269254 | MS.gene42344:intron | 30.0% |
| !!! | GTTGTTTTGATAAGCTATCT+TGG | - | chr3.2:89267936-89267955 | MS.gene42344:CDS | 30.0% |
| !!! | TGGTTTTGATATTTTGGGAA+GGG | - | chr3.2:89269236-89269255 | MS.gene42344:intron | 30.0% |
| AAAAGAAGAACACGAACAAG+CGG | + | chr3.2:89267714-89267733 | None:intergenic | 35.0% | |
| AAAAGCTGCTCTGTTAAAGA+GGG | - | chr3.2:89268172-89268191 | MS.gene42344:intron | 35.0% | |
| AAACGACGATAGAAACATAG+TGG | + | chr3.2:89268543-89268562 | None:intergenic | 35.0% | |
| AAATTTGTGTGCATTTCAGG+AGG | - | chr3.2:89270418-89270437 | MS.gene42344:CDS | 35.0% | |
| AAGGGAAAATGCCTTTGATA+TGG | + | chr3.2:89268468-89268487 | None:intergenic | 35.0% | |
| AAGTTTGTGGTTGATCTACT+CGG | - | chr3.2:89269872-89269891 | MS.gene42344:intron | 35.0% | |
| AATTGTTACCTCCATAGCTA+AGG | + | chr3.2:89267354-89267373 | None:intergenic | 35.0% | |
| AGGGAAAATGCCTTTGATAT+GGG | + | chr3.2:89268467-89268486 | None:intergenic | 35.0% | |
| ATGCATAGTTCAAGAGGAAT+TGG | - | chr3.2:89268249-89268268 | MS.gene42344:CDS | 35.0% | |
| CCTTCTAATTTAGCAGTTCA+AGG | - | chr3.2:89270726-89270745 | MS.gene42344:CDS | 35.0% | |
| CCTTGAACTGCTAAATTAGA+AGG | + | chr3.2:89270729-89270748 | None:intergenic | 35.0% | |
| CGAATTAGCATATAAGACAC+TGG | + | chr3.2:89270393-89270412 | None:intergenic | 35.0% | |
| CTCTCCAAAGATGAGAATTA+GGG | + | chr3.2:89267524-89267543 | None:intergenic | 35.0% | |
| GAAAATTTGTATCGAGTGAC+TGG | - | chr3.2:89269279-89269298 | MS.gene42344:CDS | 35.0% | |
| GATATTTGATCAATGGTGGT+AGG | + | chr3.2:89270801-89270820 | None:intergenic | 35.0% | |
| GATGAGGAAATCATGATTAC+TGG | + | chr3.2:89269560-89269579 | None:intergenic | 35.0% | |
| GATGTTGTGGAACTAAATTC+TGG | - | chr3.2:89267126-89267145 | MS.gene42344:CDS | 35.0% | |
| GCTGTAGAAATCGAATTAGT+TGG | + | chr3.2:89270759-89270778 | None:intergenic | 35.0% | |
| GGATGCAACTCTAAATTTGT+GGG | - | chr3.2:89268493-89268512 | MS.gene42344:CDS | 35.0% | |
| GTTACCCTAATTCTCATCTT+TGG | - | chr3.2:89267517-89267536 | MS.gene42344:intron | 35.0% | |
| TACATATGTAGGTACAGTGT+TGG | - | chr3.2:89269934-89269953 | MS.gene42344:intron | 35.0% | |
| TAGAGTTGCATCCAAATCAA+GGG | + | chr3.2:89268486-89268505 | None:intergenic | 35.0% | |
| TATGGGATTCATGTTAAGCT+CGG | - | chr3.2:89269146-89269165 | MS.gene42344:intron | 35.0% | |
| TCACAAGACAATTTAGAGAG+TGG | + | chr3.2:89270499-89270518 | None:intergenic | 35.0% | |
| TGCATGGTACATCATAAGAA+TGG | - | chr3.2:89269318-89269337 | MS.gene42344:CDS | 35.0% | |
| TGGATGCAACTCTAAATTTG+TGG | - | chr3.2:89268492-89268511 | MS.gene42344:CDS | 35.0% | |
| TGTTTGTGAGGTTTAATGCT+AGG | - | chr3.2:89269008-89269027 | MS.gene42344:intron | 35.0% | |
| TTAGAGTTGCATCCAAATCA+AGG | + | chr3.2:89268487-89268506 | None:intergenic | 35.0% | |
| TTATGCTGCTGTCTTGATTT+CGG | - | chr3.2:89267495-89267514 | MS.gene42344:CDS | 35.0% | |
| TTCCGATATTTGATCAATGG+TGG | + | chr3.2:89270805-89270824 | None:intergenic | 35.0% | |
| TTGCTTATGGGATAAGCTAT+GGG | + | chr3.2:89267747-89267766 | None:intergenic | 35.0% | |
| ! | AAACATTATGGGACTTGTTC+TGG | - | chr3.2:89268664-89268683 | MS.gene42344:intron | 35.0% |
| ! | AATCCCATAAACCTTTTCCT+CGG | + | chr3.2:89269135-89269154 | None:intergenic | 35.0% |
| ! | CAGTCTTTTCAGTCAATTCA+AGG | + | chr3.2:89268427-89268446 | None:intergenic | 35.0% |
| ! | TAGGGTCTTATGAAAGTTTG+TGG | - | chr3.2:89269859-89269878 | MS.gene42344:intron | 35.0% |
| !! | AACAACTGGGAATATTTTGG+CGG | + | chr3.2:89267288-89267307 | None:intergenic | 35.0% |
| !! | AGATGCTGATTCTTAACAAC+TGG | + | chr3.2:89267302-89267321 | None:intergenic | 35.0% |
| !! | ATTCTTTGTTTCTGCACTGA+AGG | - | chr3.2:89268576-89268595 | MS.gene42344:intron | 35.0% |
| !! | GATCCTTGCAAAAAAGTACT+AGG | - | chr3.2:89269104-89269123 | MS.gene42344:intron | 35.0% |
| !! | GATGCTGATTCTTAACAACT+GGG | + | chr3.2:89267301-89267320 | None:intergenic | 35.0% |
| !! | GGTTGTTGGTGTTATTTCAA+TGG | - | chr3.2:89270120-89270139 | MS.gene42344:intron | 35.0% |
| !! | TGTTGGTGTTATTTCAATGG+AGG | - | chr3.2:89270123-89270142 | MS.gene42344:intron | 35.0% |
| !! | TTCTTTGTTTCTGCACTGAA+GGG | - | chr3.2:89268577-89268596 | MS.gene42344:intron | 35.0% |
| !!! | AAAGGCATTTTCCCTTGATT+TGG | - | chr3.2:89268472-89268491 | MS.gene42344:CDS | 35.0% |
| !!! | GATATTTTCAGGTGCTTGAT+CGG | - | chr3.2:89268135-89268154 | MS.gene42344:intron | 35.0% |
| AATTTCGAAGTCGCAGTACA+AGG | + | chr3.2:89269215-89269234 | None:intergenic | 40.0% | |
| ACTCTTGGACTCATGTCTTT+AGG | - | chr3.2:89267206-89267225 | MS.gene42344:CDS | 40.0% | |
| ACTGCTGGTAGTAAGATTGA+CGG | - | chr3.2:89269974-89269993 | MS.gene42344:intron | 40.0% | |
| AGCACATATGACAGGAACAT+TGG | + | chr3.2:89270352-89270371 | None:intergenic | 40.0% | |
| AGGAGAGCGAACAAACATTA+TGG | - | chr3.2:89268652-89268671 | MS.gene42344:intron | 40.0% | |
| AGGTTGTTCATATTGCATCC+TGG | - | chr3.2:89270054-89270073 | MS.gene42344:intron | 40.0% | |
| ATCGAGTGACTGGAAGAAAA+TGG | - | chr3.2:89269289-89269308 | MS.gene42344:CDS | 40.0% | |
| ATTATGTGTGTGTCTGTGTG+TGG | - | chr3.2:89267784-89267803 | MS.gene42344:intron | 40.0% | |
| CAAGCTGTTTGTACACGATA+CGG | - | chr3.2:89267663-89267682 | MS.gene42344:intron | 40.0% | |
| CACACAGACACACACATAAT+TGG | + | chr3.2:89267784-89267803 | None:intergenic | 40.0% | |
| CAGATTTGATGAGAACTTCG+AGG | + | chr3.2:89267241-89267260 | None:intergenic | 40.0% | |
| CATAGCTTATCCCATAAGCA+AGG | - | chr3.2:89267746-89267765 | MS.gene42344:intron | 40.0% | |
| CCTCTCCAAAGATGAGAATT+AGG | + | chr3.2:89267525-89267544 | None:intergenic | 40.0% | |
| CTCGAAGTTCTCATCAAATC+TGG | - | chr3.2:89267239-89267258 | MS.gene42344:CDS | 40.0% | |
| CTTATCCCATAAGCAAGGTA+AGG | - | chr3.2:89267751-89267770 | MS.gene42344:intron | 40.0% | |
| CTTGCTTATGGGATAAGCTA+TGG | + | chr3.2:89267748-89267767 | None:intergenic | 40.0% | |
| GAAAAGCTGCTCTGTTAAAG+AGG | - | chr3.2:89268171-89268190 | MS.gene42344:intron | 40.0% | |
| GAAACAACAGCACATATGAC+AGG | + | chr3.2:89270360-89270379 | None:intergenic | 40.0% | |
| GAAATCAAGACAGCAGCATA+AGG | + | chr3.2:89267496-89267515 | None:intergenic | 40.0% | |
| GATCAAGTCATGACTAATGC+AGG | - | chr3.2:89270646-89270665 | MS.gene42344:CDS | 40.0% | |
| GATCGGAAATTCCTTAGCTA+TGG | - | chr3.2:89267340-89267359 | MS.gene42344:intron | 40.0% | |
| GGAGAGCGAACAAACATTAT+GGG | - | chr3.2:89268653-89268672 | MS.gene42344:intron | 40.0% | |
| GTACTGCGACTTCGAAATTA+TGG | - | chr3.2:89269216-89269235 | MS.gene42344:intron | 40.0% | |
| GTGACTGTTGGTACATATGT+AGG | - | chr3.2:89269923-89269942 | MS.gene42344:intron | 40.0% | |
| GTGAGGTTTAATGCTAGGAT+TGG | - | chr3.2:89269013-89269032 | MS.gene42344:intron | 40.0% | |
| TATCGTGTACAAACAGCTTG+AGG | + | chr3.2:89267663-89267682 | None:intergenic | 40.0% | |
| TGAAACACTGCAGAATGATG+AGG | + | chr3.2:89269576-89269595 | None:intergenic | 40.0% | |
| TGAGGAACAACTAGAGTTCA+AGG | - | chr3.2:89269709-89269728 | MS.gene42344:intron | 40.0% | |
| TGTAATCGAAGAGCTTCTTC+AGG | - | chr3.2:89270147-89270166 | MS.gene42344:intron | 40.0% | |
| TTCTACAGCTACTTCTGCAA+CGG | - | chr3.2:89270770-89270789 | MS.gene42344:CDS | 40.0% | |
| ! | CATGAATGCTTCTAAGGAGA+AGG | - | chr3.2:89270680-89270699 | MS.gene42344:CDS | 40.0% |
| ! | CCTAATTCTCATCTTTGGAG+AGG | - | chr3.2:89267522-89267541 | MS.gene42344:intron | 40.0% |
| ! | TGTGGATTTTCATGGCAATG+AGG | - | chr3.2:89268211-89268230 | MS.gene42344:CDS | 40.0% |
| ! | TTGAGATTTTGAGCAGACGA+TGG | - | chr3.2:89268702-89268721 | MS.gene42344:intron | 40.0% |
| ! | TTGTACACGATACGGATTGA+TGG | - | chr3.2:89267671-89267690 | MS.gene42344:intron | 40.0% |
| !! | AAAAGTGCTCCCTTGGATAA+AGG | - | chr3.2:89269752-89269771 | MS.gene42344:CDS | 40.0% |
| !! | CAACGCCTGCTTTTAAAAAG+CGG | - | chr3.2:89270026-89270045 | MS.gene42344:intron | 40.0% |
| !! | GCTTTTAAAAAGCGGCATAG+AGG | - | chr3.2:89270034-89270053 | MS.gene42344:intron | 40.0% |
| !! | TATCTCTTTGAGGTGACTGT+TGG | - | chr3.2:89269911-89269930 | MS.gene42344:intron | 40.0% |
| !! | TTGCAAAAAAGTACTAGGCC+TGG | - | chr3.2:89269109-89269128 | MS.gene42344:intron | 40.0% |
| !! | TTTGTTTTTCTGCGTAGGCT+GGG | - | chr3.2:89268354-89268373 | MS.gene42344:intron | 40.0% |
| !! | TTTTTAAAAGCAGGCGTTGC+TGG | + | chr3.2:89270025-89270044 | None:intergenic | 40.0% |
| !!! | AGGCCTAGTACTTTTTTGCA+AGG | + | chr3.2:89269110-89269129 | None:intergenic | 40.0% |
| !!! | CTATGCCGCTTTTTAAAAGC+AGG | + | chr3.2:89270034-89270053 | None:intergenic | 40.0% |
| !!! | GGTGGACTTTTTTTCACTTG+TGG | + | chr3.2:89270004-89270023 | None:intergenic | 40.0% |
| !!! | TTTTGTTTTTCTGCGTAGGC+TGG | - | chr3.2:89268353-89268372 | MS.gene42344:intron | 40.0% |
| AACACCAACAACCACTTCGT+TGG | + | chr3.2:89270113-89270132 | None:intergenic | 45.0% | |
| AAGGACAGCTGTAGGAACAA+GGG | - | chr3.2:89269728-89269747 | MS.gene42344:CDS | 45.0% | |
| ACACCAACAACCACTTCGTT+GGG | + | chr3.2:89270112-89270131 | None:intergenic | 45.0% | |
| AGCACACCTTACCTTGCTTA+TGG | + | chr3.2:89267760-89267779 | None:intergenic | 45.0% | |
| AGTAGAGTCCCAGTTTATGC+AGG | - | chr3.2:89268632-89268651 | MS.gene42344:intron | 45.0% | |
| ATCAAGACAGCAGCATAAGG+TGG | + | chr3.2:89267493-89267512 | None:intergenic | 45.0% | |
| CGGAAATTCCTTAGCTATGG+AGG | - | chr3.2:89267343-89267362 | MS.gene42344:intron | 45.0% | |
| CTTGATCGGATGTTGGGTAA+AGG | - | chr3.2:89268149-89268168 | MS.gene42344:intron | 45.0% | |
| CTTTGTGCTCTCACTTAGCA+TGG | - | chr3.2:89268320-89268339 | MS.gene42344:CDS | 45.0% | |
| GATGAGACAACCATCATAGC+CGG | - | chr3.2:89268398-89268417 | MS.gene42344:intron | 45.0% | |
| GCACACCTTACCTTGCTTAT+GGG | + | chr3.2:89267759-89267778 | None:intergenic | 45.0% | |
| GCTATCTTGGACAGCTTATG+TGG | - | chr3.2:89267949-89267968 | MS.gene42344:CDS | 45.0% | |
| GGCGACAAAGTTTCTCATCT+TGG | - | chr3.2:89270553-89270572 | MS.gene42344:intron | 45.0% | |
| TAGAGTTCAAGGACAGCTGT+AGG | - | chr3.2:89269720-89269739 | MS.gene42344:intron | 45.0% | |
| TATCGGAAAGTGAGTCACTC+AGG | - | chr3.2:89270817-89270836 | MS.gene42344:CDS | 45.0% | |
| TCTACAGCTACTTCTGCAAC+GGG | - | chr3.2:89270771-89270790 | MS.gene42344:CDS | 45.0% | |
| TGCCATGACTCCCATATCAA+AGG | - | chr3.2:89268454-89268473 | MS.gene42344:intron | 45.0% | |
| TGCCTTTGATATGGGAGTCA+TGG | + | chr3.2:89268459-89268478 | None:intergenic | 45.0% | |
| TGGCCGAGGAAAAGGTTTAT+GGG | - | chr3.2:89269129-89269148 | MS.gene42344:intron | 45.0% | |
| TTCGCTCTCCTGCATAAACT+GGG | + | chr3.2:89268643-89268662 | None:intergenic | 45.0% | |
| ! | ACACGATACGGATTGATGGT+TGG | - | chr3.2:89267675-89267694 | MS.gene42344:intron | 45.0% |
| ! | ATAGGTTTGGTATGCTTCGC+TGG | - | chr3.2:89267167-89267186 | MS.gene42344:CDS | 45.0% |
| ! | TTCAGTCAATTCAAGGGCAC+CGG | + | chr3.2:89268420-89268439 | None:intergenic | 45.0% |
| ACTTCGTTGGGTGGAAACAC+GGG | + | chr3.2:89270100-89270119 | None:intergenic | 50.0% | |
| CAAGGACAGCTGTAGGAACA+AGG | - | chr3.2:89269727-89269746 | MS.gene42344:CDS | 50.0% | |
| CACTTCGTTGGGTGGAAACA+CGG | + | chr3.2:89270101-89270120 | None:intergenic | 50.0% | |
| CAGGTGCTTGATCGGATGTT+GGG | - | chr3.2:89268143-89268162 | MS.gene42344:intron | 50.0% | |
| CTGGCCGAGGAAAAGGTTTA+TGG | - | chr3.2:89269128-89269147 | MS.gene42344:intron | 50.0% | |
| GCTGCAGATGTAGGATGTTG+TGG | - | chr3.2:89267113-89267132 | MS.gene42344:CDS | 50.0% | |
| GCTGGTAGTAAGATTGACGG+CGG | - | chr3.2:89269977-89269996 | MS.gene42344:intron | 50.0% | |
| GGCTGCAACAGATTTGCATC+AGG | + | chr3.2:89270708-89270727 | None:intergenic | 50.0% | |
| GTTCGCTCTCCTGCATAAAC+TGG | + | chr3.2:89268644-89268663 | None:intergenic | 50.0% | |
| TCACACGATACTGTGACTGC+TGG | - | chr3.2:89269959-89269978 | MS.gene42344:intron | 50.0% | |
| TCAGGTGCTTGATCGGATGT+TGG | - | chr3.2:89268142-89268161 | MS.gene42344:intron | 50.0% | |
| TTGGGAAGGGTTTACCTGTG+TGG | - | chr3.2:89269249-89269268 | MS.gene42344:intron | 50.0% | |
| ! | CATAAACCTTTTCCTCGGCC+AGG | + | chr3.2:89269130-89269149 | None:intergenic | 50.0% |
| ! | GGCAGAGCTCAAGACTTTTG+TGG | - | chr3.2:89268193-89268212 | MS.gene42344:CDS | 50.0% |
| ! | TTAAAAGCAGGCGTTGCTGG+TGG | + | chr3.2:89270022-89270041 | None:intergenic | 50.0% |
| ! | TTTTCTGCGTAGGCTGGGAA+AGG | - | chr3.2:89268359-89268378 | MS.gene42344:intron | 50.0% |
| !! | AGGGAGCATTATCAAGGTCC+AGG | + | chr3.2:89270075-89270094 | None:intergenic | 50.0% |
| !! | CAAGGGAAAAAGTGCTCCCT+TGG | - | chr3.2:89269745-89269764 | MS.gene42344:CDS | 50.0% |
| !!! | CTGGGAATATTTTGGCGGCA+TGG | + | chr3.2:89267283-89267302 | None:intergenic | 50.0% |
| CCAACAACCACTTCGTTGGG+TGG | + | chr3.2:89270109-89270128 | None:intergenic | 55.0% | |
| CCACCCAACGAAGTGGTTGT+TGG | - | chr3.2:89270106-89270125 | MS.gene42344:intron | 55.0% | |
| CGTGTTTCCACCCAACGAAG+TGG | - | chr3.2:89270099-89270118 | MS.gene42344:intron | 55.0% | |
| TTGGGTGGAAACACGGGCAA+GGG | + | chr3.2:89270094-89270113 | None:intergenic | 55.0% | |
| ! | GGTATGCTTCGCTGGTCTCA+TGG | - | chr3.2:89267175-89267194 | MS.gene42344:CDS | 55.0% |
| !! | AAAAGTACTAGGCCTGGCCG+AGG | - | chr3.2:89269115-89269134 | MS.gene42344:intron | 55.0% |
| !! | CGGGCAAGGGAGCATTATCA+AGG | + | chr3.2:89270081-89270100 | None:intergenic | 55.0% |
| !! | CTCATGGCTGGTCTCACTCT+TGG | - | chr3.2:89267191-89267210 | MS.gene42344:CDS | 55.0% |
| !! | TTCAAGGGCACCGGCTATGA+TGG | + | chr3.2:89268411-89268430 | None:intergenic | 55.0% |
| ACTAGGCCTGGCCGAGGAAA+AGG | - | chr3.2:89269121-89269140 | MS.gene42344:intron | 60.0% | |
| GCGGCATGGATGCGATGTTG+AGG | + | chr3.2:89267269-89267288 | None:intergenic | 60.0% | |
| GTTGGGTGGAAACACGGGCA+AGG | + | chr3.2:89270095-89270114 | None:intergenic | 60.0% | |
| TCTGCGTAGGCTGGGAAAGG+AGG | - | chr3.2:89268362-89268381 | MS.gene42344:intron | 60.0% | |
| ! | TGCTTCGCTGGTCTCATGGC+TGG | - | chr3.2:89267179-89267198 | MS.gene42344:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 89267110 | 89270848 | 89267110 | ID=MS.gene42344 |
| chr3.2 | mRNA | 89267110 | 89270848 | 89267110 | ID=MS.gene42344.t1;Parent=MS.gene42344 |
| chr3.2 | exon | 89270594 | 89270848 | 89270594 | ID=MS.gene42344.t1.exon1;Parent=MS.gene42344.t1 |
| chr3.2 | CDS | 89270594 | 89270848 | 89270594 | ID=cds.MS.gene42344.t1;Parent=MS.gene42344.t1 |
| chr3.2 | exon | 89270415 | 89270498 | 89270415 | ID=MS.gene42344.t1.exon2;Parent=MS.gene42344.t1 |
| chr3.2 | CDS | 89270415 | 89270498 | 89270415 | ID=cds.MS.gene42344.t1;Parent=MS.gene42344.t1 |
| chr3.2 | exon | 89270191 | 89270304 | 89270191 | ID=MS.gene42344.t1.exon3;Parent=MS.gene42344.t1 |
| chr3.2 | CDS | 89270191 | 89270304 | 89270191 | ID=cds.MS.gene42344.t1;Parent=MS.gene42344.t1 |
| chr3.2 | exon | 89269726 | 89269812 | 89269726 | ID=MS.gene42344.t1.exon4;Parent=MS.gene42344.t1 |
| chr3.2 | CDS | 89269726 | 89269812 | 89269726 | ID=cds.MS.gene42344.t1;Parent=MS.gene42344.t1 |
| chr3.2 | exon | 89269448 | 89269587 | 89269448 | ID=MS.gene42344.t1.exon5;Parent=MS.gene42344.t1 |
| chr3.2 | CDS | 89269448 | 89269587 | 89269448 | ID=cds.MS.gene42344.t1;Parent=MS.gene42344.t1 |
| chr3.2 | exon | 89269273 | 89269360 | 89269273 | ID=MS.gene42344.t1.exon6;Parent=MS.gene42344.t1 |
| chr3.2 | CDS | 89269273 | 89269360 | 89269273 | ID=cds.MS.gene42344.t1;Parent=MS.gene42344.t1 |
| chr3.2 | exon | 89268467 | 89268540 | 89268467 | ID=MS.gene42344.t1.exon7;Parent=MS.gene42344.t1 |
| chr3.2 | CDS | 89268467 | 89268540 | 89268467 | ID=cds.MS.gene42344.t1;Parent=MS.gene42344.t1 |
| chr3.2 | exon | 89268185 | 89268369 | 89268185 | ID=MS.gene42344.t1.exon8;Parent=MS.gene42344.t1 |
| chr3.2 | CDS | 89268185 | 89268369 | 89268185 | ID=cds.MS.gene42344.t1;Parent=MS.gene42344.t1 |
| chr3.2 | exon | 89267790 | 89268013 | 89267790 | ID=MS.gene42344.t1.exon9;Parent=MS.gene42344.t1 |
| chr3.2 | CDS | 89267790 | 89268013 | 89267790 | ID=cds.MS.gene42344.t1;Parent=MS.gene42344.t1 |
| chr3.2 | exon | 89267475 | 89267521 | 89267475 | ID=MS.gene42344.t1.exon10;Parent=MS.gene42344.t1 |
| chr3.2 | CDS | 89267475 | 89267521 | 89267475 | ID=cds.MS.gene42344.t1;Parent=MS.gene42344.t1 |
| chr3.2 | exon | 89267110 | 89267290 | 89267110 | ID=MS.gene42344.t1.exon11;Parent=MS.gene42344.t1 |
| chr3.2 | CDS | 89267110 | 89267290 | 89267110 | ID=cds.MS.gene42344.t1;Parent=MS.gene42344.t1 |
| Gene Sequence |
| Protein sequence |
