Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43329.t1 | XP_003589912.1 | 99.3 | 1119 | 7 | 1 | 1 | 1118 | 1 | 1119 | 0.00E+00 | 2222.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43329.t1 | Q84WU2 | 77.0 | 1123 | 245 | 8 | 1 | 1118 | 1 | 1115 | 0.0e+00 | 1770.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43329.t1 | G7I2I7 | 99.3 | 1119 | 7 | 1 | 1 | 1118 | 1 | 1119 | 0.0e+00 | 2222.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052609 | MS.gene43329 | 0.806978 | 6.33E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43329.t1 | MTR_1g041240 | 99.285 | 1119 | 7 | 1 | 1 | 1118 | 1 | 1119 | 0.0 | 2311 |
MS.gene43329.t1 | MTR_1g041240 | 99.196 | 1119 | 7 | 2 | 1 | 1118 | 1 | 1118 | 0.0 | 2305 |
MS.gene43329.t1 | MTR_1g041240 | 99.106 | 1119 | 7 | 2 | 1 | 1118 | 1 | 1117 | 0.0 | 2302 |
MS.gene43329.t1 | MTR_3g079840 | 79.074 | 1123 | 226 | 6 | 1 | 1118 | 1 | 1119 | 0.0 | 1838 |
MS.gene43329.t1 | MTR_3g079840 | 78.985 | 1123 | 226 | 6 | 1 | 1118 | 1 | 1118 | 0.0 | 1836 |
MS.gene43329.t1 | MTR_5g086700 | 78.616 | 1127 | 228 | 8 | 1 | 1118 | 1 | 1123 | 0.0 | 1825 |
MS.gene43329.t1 | MTR_5g086700 | 78.527 | 1127 | 226 | 9 | 1 | 1118 | 1 | 1120 | 0.0 | 1817 |
MS.gene43329.t1 | MTR_5g091550 | 58.451 | 284 | 104 | 3 | 536 | 806 | 147 | 429 | 1.21e-98 | 322 |
MS.gene43329.t1 | MTR_5g091550 | 46.377 | 138 | 73 | 1 | 50 | 186 | 10 | 147 | 1.08e-35 | 142 |
MS.gene43329.t1 | MTR_5g091550 | 57.785 | 289 | 103 | 4 | 536 | 806 | 147 | 434 | 4.54e-97 | 317 |
MS.gene43329.t1 | MTR_5g091550 | 46.377 | 138 | 73 | 1 | 50 | 186 | 10 | 147 | 1.08e-35 | 143 |
MS.gene43329.t1 | MTR_5g091450 | 51.130 | 354 | 161 | 6 | 530 | 879 | 156 | 501 | 1.06e-96 | 326 |
MS.gene43329.t1 | MTR_5g091450 | 54.305 | 151 | 63 | 3 | 38 | 186 | 16 | 162 | 2.57e-46 | 179 |
MS.gene43329.t1 | MTR_5g091410 | 56.272 | 279 | 116 | 4 | 547 | 823 | 15 | 289 | 4.87e-92 | 306 |
MS.gene43329.t1 | MTR_5g091530 | 53.103 | 290 | 115 | 2 | 530 | 819 | 84 | 352 | 1.03e-89 | 294 |
MS.gene43329.t1 | MTR_5g091530 | 45.238 | 84 | 46 | 0 | 98 | 181 | 2 | 85 | 8.21e-18 | 87.4 |
MS.gene43329.t1 | MTR_5g091430 | 53.817 | 262 | 117 | 3 | 563 | 823 | 2 | 260 | 2.85e-81 | 276 |
MS.gene43329.t1 | MTR_5g091180 | 45.088 | 397 | 189 | 9 | 431 | 823 | 80 | 451 | 3.73e-81 | 280 |
MS.gene43329.t1 | MTR_5g091180 | 49.342 | 152 | 69 | 3 | 32 | 181 | 25 | 170 | 7.56e-40 | 159 |
MS.gene43329.t1 | MTR_1g042160 | 43.077 | 130 | 71 | 2 | 59 | 185 | 13 | 142 | 3.88e-31 | 125 |
MS.gene43329.t1 | MTR_3g108660 | 34.247 | 292 | 164 | 11 | 201 | 479 | 107 | 383 | 4.64e-29 | 126 |
MS.gene43329.t1 | MTR_3g108660 | 34.247 | 292 | 164 | 11 | 201 | 479 | 107 | 383 | 6.54e-29 | 125 |
MS.gene43329.t1 | MTR_7g107200 | 38.509 | 161 | 87 | 3 | 59 | 215 | 13 | 165 | 1.47e-28 | 119 |
MS.gene43329.t1 | MTR_1g010040 | 30.618 | 356 | 198 | 14 | 201 | 522 | 107 | 447 | 1.32e-26 | 118 |
MS.gene43329.t1 | MTR_1g010040 | 28.857 | 350 | 212 | 11 | 201 | 522 | 107 | 447 | 1.40e-26 | 118 |
MS.gene43329.t1 | MTR_8g011730 | 38.760 | 129 | 75 | 2 | 57 | 181 | 12 | 140 | 3.92e-23 | 102 |
MS.gene43329.t1 | MTR_7g107160 | 35.036 | 137 | 78 | 2 | 60 | 185 | 131 | 267 | 9.66e-22 | 100 |
MS.gene43329.t1 | MTR_7g107160 | 39.189 | 74 | 45 | 0 | 112 | 185 | 1 | 74 | 2.19e-13 | 74.3 |
MS.gene43329.t1 | MTR_1g044450 | 41.985 | 131 | 65 | 6 | 58 | 183 | 64 | 188 | 4.17e-21 | 100 |
MS.gene43329.t1 | MTR_4g130940 | 25.876 | 371 | 212 | 13 | 201 | 555 | 92 | 415 | 5.65e-21 | 99.8 |
MS.gene43329.t1 | MTR_4g130940 | 25.876 | 371 | 212 | 13 | 201 | 555 | 92 | 415 | 5.96e-21 | 99.8 |
MS.gene43329.t1 | MTR_3g087140 | 26.101 | 318 | 183 | 8 | 202 | 478 | 24 | 330 | 1.84e-20 | 95.1 |
MS.gene43329.t1 | MTR_6g022290 | 26.230 | 305 | 196 | 12 | 201 | 490 | 29 | 319 | 2.28e-20 | 97.1 |
MS.gene43329.t1 | MTR_3g100480 | 26.837 | 313 | 182 | 13 | 202 | 487 | 585 | 877 | 5.21e-20 | 97.1 |
MS.gene43329.t1 | MTR_1g073790 | 40.458 | 131 | 67 | 6 | 58 | 183 | 61 | 185 | 7.45e-20 | 96.7 |
MS.gene43329.t1 | MTR_1g073800 | 38.760 | 129 | 74 | 5 | 58 | 183 | 48 | 174 | 1.38e-19 | 93.6 |
MS.gene43329.t1 | MTR_8g090190 | 26.706 | 337 | 192 | 11 | 202 | 496 | 24 | 347 | 2.01e-19 | 92.0 |
MS.gene43329.t1 | MTR_5g030360 | 25.581 | 301 | 200 | 10 | 201 | 490 | 154 | 441 | 3.59e-19 | 94.0 |
MS.gene43329.t1 | MTR_3g106700 | 33.793 | 145 | 84 | 3 | 54 | 186 | 401 | 545 | 3.64e-19 | 94.7 |
MS.gene43329.t1 | MTR_3g106700 | 30.159 | 126 | 82 | 4 | 62 | 181 | 71 | 196 | 3.16e-15 | 81.6 |
MS.gene43329.t1 | MTR_6g022310 | 25.939 | 293 | 190 | 13 | 201 | 479 | 127 | 406 | 9.35e-18 | 89.0 |
MS.gene43329.t1 | MTR_4g115880 | 24.274 | 379 | 187 | 14 | 199 | 484 | 195 | 566 | 1.59e-17 | 88.2 |
MS.gene43329.t1 | MTR_6g022300 | 24.351 | 308 | 198 | 12 | 201 | 490 | 67 | 357 | 1.94e-17 | 87.8 |
MS.gene43329.t1 | MTR_3g100480 | 25.369 | 339 | 184 | 14 | 202 | 487 | 585 | 907 | 3.39e-17 | 87.8 |
MS.gene43329.t1 | MTR_8g006190 | 31.343 | 134 | 79 | 3 | 72 | 198 | 6 | 133 | 5.00e-17 | 85.5 |
MS.gene43329.t1 | MTR_8g006190 | 29.008 | 131 | 85 | 3 | 58 | 181 | 157 | 286 | 1.90e-11 | 68.2 |
MS.gene43329.t1 | MTR_2g070390 | 25.161 | 310 | 201 | 10 | 201 | 490 | 22 | 320 | 5.72e-17 | 86.7 |
MS.gene43329.t1 | MTR_4g123750 | 29.452 | 146 | 91 | 4 | 52 | 186 | 13 | 157 | 4.18e-15 | 78.2 |
MS.gene43329.t1 | MTR_8g471100 | 24.746 | 295 | 202 | 12 | 194 | 480 | 206 | 488 | 7.83e-15 | 79.3 |
MS.gene43329.t1 | MTR_8g067060 | 24.746 | 295 | 202 | 12 | 194 | 480 | 197 | 479 | 8.00e-15 | 79.3 |
MS.gene43329.t1 | MTR_5g430360 | 26.887 | 212 | 145 | 7 | 281 | 490 | 70 | 273 | 1.07e-14 | 79.0 |
MS.gene43329.t1 | MTR_8g006190 | 30.252 | 119 | 70 | 3 | 87 | 198 | 13 | 125 | 1.66e-12 | 71.2 |
MS.gene43329.t1 | MTR_8g006190 | 29.008 | 131 | 85 | 3 | 58 | 181 | 149 | 278 | 1.55e-11 | 68.2 |
MS.gene43329.t1 | MTR_8g064910 | 22.884 | 319 | 212 | 12 | 188 | 490 | 41 | 341 | 1.69e-11 | 68.2 |
MS.gene43329.t1 | MTR_4g111860 | 23.667 | 300 | 197 | 13 | 200 | 480 | 86 | 372 | 2.53e-11 | 67.8 |
MS.gene43329.t1 | MTR_5g091460 | 65.116 | 43 | 15 | 0 | 563 | 605 | 2 | 44 | 7.26e-11 | 58.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43329.t1 | AT5G06600 | 78.578 | 1125 | 225 | 11 | 1 | 1118 | 1 | 1116 | 0.0 | 1820 |
MS.gene43329.t1 | AT5G06600 | 78.489 | 1125 | 225 | 11 | 1 | 1118 | 1 | 1115 | 0.0 | 1817 |
MS.gene43329.t1 | AT3G11910 | 77.649 | 1123 | 238 | 8 | 1 | 1118 | 1 | 1115 | 0.0 | 1813 |
MS.gene43329.t1 | AT3G11910 | 77.649 | 1123 | 238 | 8 | 1 | 1118 | 1 | 1115 | 0.0 | 1813 |
MS.gene43329.t1 | AT3G11910 | 77.560 | 1123 | 238 | 8 | 1 | 1118 | 1 | 1114 | 0.0 | 1811 |
MS.gene43329.t1 | AT3G11910 | 77.560 | 1123 | 238 | 8 | 1 | 1118 | 1 | 1114 | 0.0 | 1811 |
MS.gene43329.t1 | AT5G06600 | 79.516 | 991 | 188 | 10 | 1 | 984 | 1 | 983 | 0.0 | 1611 |
MS.gene43329.t1 | AT3G58250 | 49.219 | 128 | 62 | 2 | 59 | 183 | 10 | 137 | 9.38e-34 | 133 |
MS.gene43329.t1 | AT3G58270 | 45.238 | 126 | 68 | 1 | 59 | 183 | 8 | 133 | 1.65e-29 | 121 |
MS.gene43329.t1 | AT3G58270 | 45.238 | 126 | 68 | 1 | 59 | 183 | 8 | 133 | 1.65e-29 | 121 |
MS.gene43329.t1 | AT3G58270 | 45.238 | 126 | 68 | 1 | 59 | 183 | 8 | 133 | 1.65e-29 | 121 |
MS.gene43329.t1 | AT3G49600 | 29.345 | 351 | 214 | 12 | 201 | 528 | 106 | 445 | 6.40e-28 | 122 |
MS.gene43329.t1 | AT3G49600 | 29.345 | 351 | 214 | 12 | 201 | 528 | 106 | 445 | 6.40e-28 | 122 |
MS.gene43329.t1 | AT3G49600 | 31.250 | 288 | 179 | 9 | 201 | 480 | 106 | 382 | 1.34e-27 | 121 |
MS.gene43329.t1 | AT3G58370 | 46.094 | 128 | 65 | 3 | 59 | 182 | 9 | 136 | 1.90e-27 | 114 |
MS.gene43329.t1 | AT3G58210 | 42.188 | 128 | 71 | 2 | 59 | 183 | 8 | 135 | 1.11e-26 | 112 |
MS.gene43329.t1 | AT3G58340 | 40.323 | 124 | 73 | 1 | 59 | 181 | 8 | 131 | 1.01e-25 | 110 |
MS.gene43329.t1 | AT3G58340 | 40.323 | 124 | 73 | 1 | 59 | 181 | 8 | 131 | 1.03e-25 | 109 |
MS.gene43329.t1 | AT3G58360 | 41.270 | 126 | 73 | 1 | 59 | 183 | 8 | 133 | 1.39e-24 | 105 |
MS.gene43329.t1 | AT3G58410 | 38.889 | 126 | 73 | 2 | 59 | 183 | 8 | 130 | 1.53e-24 | 106 |
MS.gene43329.t1 | AT2G05420 | 39.850 | 133 | 70 | 3 | 60 | 183 | 10 | 141 | 1.44e-22 | 100 |
MS.gene43329.t1 | AT3G58350 | 37.984 | 129 | 76 | 3 | 59 | 183 | 8 | 136 | 3.24e-22 | 99.0 |
MS.gene43329.t1 | AT3G58350 | 37.984 | 129 | 76 | 3 | 59 | 183 | 8 | 136 | 3.24e-22 | 99.0 |
MS.gene43329.t1 | AT2G05410 | 40.945 | 127 | 71 | 3 | 60 | 183 | 9 | 134 | 3.27e-22 | 99.0 |
MS.gene43329.t1 | AT2G22310 | 25.316 | 316 | 187 | 7 | 202 | 478 | 24 | 329 | 1.74e-21 | 98.2 |
MS.gene43329.t1 | AT3G58260 | 30.213 | 235 | 119 | 8 | 60 | 257 | 9 | 235 | 2.25e-21 | 97.1 |
MS.gene43329.t1 | AT1G04300 | 42.748 | 131 | 64 | 6 | 58 | 183 | 68 | 192 | 2.51e-21 | 101 |
MS.gene43329.t1 | AT3G58410 | 36.641 | 131 | 65 | 2 | 59 | 188 | 29 | 142 | 4.58e-21 | 96.3 |
MS.gene43329.t1 | AT3G27040 | 37.008 | 127 | 78 | 2 | 59 | 183 | 9 | 135 | 5.83e-21 | 94.7 |
MS.gene43329.t1 | AT3G58200 | 36.842 | 114 | 70 | 2 | 59 | 170 | 8 | 121 | 1.68e-20 | 94.4 |
MS.gene43329.t1 | AT3G58290 | 33.566 | 143 | 82 | 3 | 51 | 181 | 3 | 144 | 2.85e-20 | 92.8 |
MS.gene43329.t1 | AT4G39910 | 26.549 | 339 | 194 | 13 | 202 | 496 | 24 | 351 | 3.81e-20 | 94.4 |
MS.gene43329.t1 | AT5G52330 | 38.060 | 134 | 72 | 6 | 58 | 186 | 19 | 146 | 4.79e-20 | 94.4 |
MS.gene43329.t1 | AT5G52330 | 38.060 | 134 | 72 | 6 | 58 | 186 | 19 | 146 | 4.79e-20 | 94.4 |
MS.gene43329.t1 | AT5G52330 | 38.060 | 134 | 72 | 6 | 58 | 186 | 19 | 146 | 4.79e-20 | 94.4 |
MS.gene43329.t1 | AT1G04300 | 41.727 | 139 | 62 | 8 | 58 | 183 | 68 | 200 | 5.36e-20 | 97.1 |
MS.gene43329.t1 | AT1G31390 | 38.710 | 124 | 72 | 2 | 52 | 171 | 1 | 124 | 1.15e-19 | 90.9 |
MS.gene43329.t1 | AT3G58440 | 38.095 | 126 | 75 | 3 | 59 | 183 | 10 | 133 | 5.26e-19 | 92.8 |
MS.gene43329.t1 | AT3G44800 | 37.008 | 127 | 78 | 2 | 59 | 183 | 5 | 131 | 8.79e-19 | 89.7 |
MS.gene43329.t1 | AT3G17380 | 32.639 | 144 | 89 | 2 | 51 | 186 | 13 | 156 | 9.28e-19 | 89.0 |
MS.gene43329.t1 | AT3G17380 | 29.412 | 136 | 91 | 3 | 52 | 183 | 168 | 302 | 1.61e-14 | 76.3 |
MS.gene43329.t1 | AT2G01790 | 35.714 | 126 | 77 | 2 | 62 | 183 | 11 | 136 | 1.35e-18 | 87.8 |
MS.gene43329.t1 | AT3G44790 | 39.370 | 127 | 69 | 4 | 59 | 181 | 5 | 127 | 1.44e-18 | 88.6 |
MS.gene43329.t1 | AT5G43560 | 39.535 | 129 | 71 | 5 | 58 | 183 | 69 | 193 | 1.46e-18 | 92.4 |
MS.gene43329.t1 | AT5G43560 | 39.535 | 129 | 71 | 5 | 58 | 183 | 69 | 193 | 1.46e-18 | 92.4 |
MS.gene43329.t1 | AT2G25320 | 34.483 | 145 | 82 | 4 | 54 | 186 | 399 | 542 | 4.30e-18 | 91.3 |
MS.gene43329.t1 | AT2G25320 | 27.215 | 158 | 103 | 6 | 50 | 197 | 61 | 216 | 5.50e-15 | 80.9 |
MS.gene43329.t1 | AT2G25320 | 34.483 | 145 | 82 | 4 | 54 | 186 | 400 | 543 | 4.37e-18 | 91.3 |
MS.gene43329.t1 | AT2G25320 | 27.215 | 158 | 103 | 6 | 50 | 197 | 62 | 217 | 5.69e-15 | 80.9 |
MS.gene43329.t1 | AT2G25320 | 34.483 | 145 | 82 | 4 | 54 | 186 | 400 | 543 | 8.99e-18 | 90.1 |
MS.gene43329.t1 | AT2G25320 | 27.215 | 158 | 103 | 6 | 50 | 197 | 62 | 217 | 8.26e-15 | 80.5 |
MS.gene43329.t1 | AT1G04300 | 42.241 | 116 | 57 | 5 | 72 | 183 | 64 | 173 | 9.18e-18 | 89.7 |
MS.gene43329.t1 | AT1G31400 | 37.209 | 129 | 74 | 3 | 59 | 183 | 8 | 133 | 2.35e-17 | 84.3 |
MS.gene43329.t1 | AT2G22310 | 28.571 | 196 | 120 | 5 | 293 | 478 | 112 | 297 | 2.85e-17 | 85.1 |
MS.gene43329.t1 | AT2G22310 | 28.571 | 196 | 120 | 5 | 293 | 478 | 107 | 292 | 3.12e-17 | 84.7 |
MS.gene43329.t1 | AT3G14400 | 26.349 | 315 | 195 | 12 | 201 | 490 | 24 | 326 | 5.25e-17 | 86.7 |
MS.gene43329.t1 | AT4G24560 | 28.065 | 310 | 184 | 14 | 201 | 487 | 542 | 835 | 6.78e-17 | 87.0 |
MS.gene43329.t1 | AT4G09780 | 33.333 | 162 | 100 | 6 | 24 | 181 | 182 | 339 | 7.96e-17 | 84.7 |
MS.gene43329.t1 | AT5G46740 | 24.638 | 345 | 233 | 10 | 162 | 487 | 121 | 457 | 8.51e-17 | 86.3 |
MS.gene43329.t1 | AT2G25330 | 25.698 | 179 | 121 | 6 | 30 | 198 | 16 | 192 | 1.06e-15 | 82.8 |
MS.gene43329.t1 | AT2G25330 | 32.394 | 142 | 84 | 3 | 57 | 186 | 357 | 498 | 1.35e-14 | 79.0 |
MS.gene43329.t1 | AT3G58240 | 34.848 | 132 | 83 | 3 | 54 | 183 | 3 | 133 | 2.50e-15 | 79.0 |
MS.gene43329.t1 | AT3G58400 | 35.849 | 106 | 66 | 2 | 79 | 183 | 24 | 128 | 2.55e-15 | 78.6 |
MS.gene43329.t1 | AT4G09780 | 31.395 | 172 | 101 | 6 | 24 | 181 | 182 | 350 | 3.02e-15 | 80.1 |
MS.gene43329.t1 | AT3G58220 | 31.579 | 133 | 85 | 5 | 56 | 183 | 7 | 138 | 1.80e-14 | 75.1 |
MS.gene43329.t1 | AT3G58220 | 31.579 | 133 | 85 | 5 | 56 | 183 | 7 | 138 | 1.93e-14 | 76.6 |
MS.gene43329.t1 | AT3G58220 | 31.579 | 133 | 85 | 5 | 56 | 183 | 7 | 138 | 2.54e-14 | 75.9 |
MS.gene43329.t1 | AT4G17895 | 25.000 | 336 | 196 | 15 | 184 | 489 | 157 | 466 | 3.04e-14 | 77.8 |
MS.gene43329.t1 | AT4G09770 | 31.126 | 151 | 92 | 5 | 49 | 195 | 150 | 292 | 5.61e-14 | 74.3 |
MS.gene43329.t1 | AT4G09770 | 31.126 | 151 | 92 | 5 | 49 | 195 | 150 | 292 | 5.61e-14 | 74.3 |
MS.gene43329.t1 | AT4G09770 | 31.126 | 151 | 92 | 5 | 49 | 195 | 176 | 318 | 5.88e-14 | 74.7 |
MS.gene43329.t1 | AT2G32870 | 31.507 | 146 | 88 | 6 | 54 | 189 | 272 | 415 | 1.78e-13 | 74.3 |
MS.gene43329.t1 | AT5G26260 | 31.496 | 127 | 79 | 3 | 63 | 181 | 66 | 192 | 2.54e-13 | 73.2 |
MS.gene43329.t1 | AT5G46740 | 28.169 | 213 | 139 | 8 | 279 | 487 | 46 | 248 | 2.69e-13 | 74.3 |
MS.gene43329.t1 | AT5G26320 | 29.771 | 131 | 82 | 3 | 63 | 183 | 65 | 195 | 3.18e-13 | 73.2 |
MS.gene43329.t1 | AT3G20360 | 31.061 | 132 | 82 | 4 | 56 | 179 | 220 | 350 | 1.61e-12 | 70.9 |
MS.gene43329.t1 | AT3G28220 | 33.600 | 125 | 74 | 5 | 60 | 180 | 239 | 358 | 3.34e-12 | 70.1 |
MS.gene43329.t1 | AT2G42460 | 36.792 | 106 | 66 | 1 | 60 | 164 | 10 | 115 | 5.82e-12 | 68.6 |
MS.gene43329.t1 | AT3G58380 | 30.435 | 115 | 78 | 2 | 59 | 171 | 8 | 122 | 1.65e-11 | 67.4 |
MS.gene43329.t1 | AT5G26280 | 28.244 | 131 | 86 | 3 | 63 | 185 | 65 | 195 | 1.93e-11 | 67.4 |
MS.gene43329.t1 | AT5G26280 | 28.244 | 131 | 86 | 3 | 63 | 185 | 84 | 214 | 1.98e-11 | 67.8 |
MS.gene43329.t1 | AT1G04300 | 40.000 | 100 | 50 | 5 | 88 | 183 | 69 | 162 | 2.92e-11 | 68.6 |
MS.gene43329.t1 | AT2G24640 | 28.652 | 178 | 111 | 7 | 308 | 480 | 125 | 291 | 6.12e-11 | 67.0 |
MS.gene43329.t1 | AT2G24640 | 28.652 | 178 | 111 | 7 | 308 | 480 | 295 | 461 | 8.17e-11 | 66.6 |
Find 215 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACATGTTCGCACATGATTT+TGG | 0.140151 | 1.4:+33610525 | None:intergenic |
AGAATATTAATGATCATTAT+TGG | 0.175111 | 1.4:-33605778 | MS.gene43329:CDS |
TATTATTTCCAGTCGGTTTC+AGG | 0.202322 | 1.4:-33602782 | MS.gene43329:intron |
GAGTACTTTGTAAATTTAAA+AGG | 0.221866 | 1.4:+33614643 | None:intergenic |
AGAGAACCCTGTTAAGTTCT+TGG | 0.245960 | 1.4:+33618471 | None:intergenic |
TCACTATTGGTGGCTATAAA+TGG | 0.267592 | 1.4:-33623129 | MS.gene43329:intron |
AAAGAGTTAACCAAATCTTT+TGG | 0.276067 | 1.4:-33618530 | MS.gene43329:CDS |
CCTTACAATTAGATCTTGAT+AGG | 0.285562 | 1.4:-33617375 | MS.gene43329:CDS |
TGACTAACCTTTCTGAAATA+AGG | 0.285682 | 1.4:+33618733 | None:intergenic |
CTTTGGAGACCCTTTCTTCT+TGG | 0.286596 | 1.4:-33604256 | MS.gene43329:CDS |
TAGGCTGTGGTTTAGGTTGC+TGG | 0.297497 | 1.4:+33607607 | None:intergenic |
TTAGATCTTGATAGGGATAA+TGG | 0.306686 | 1.4:-33617367 | MS.gene43329:CDS |
TATACCTTGAAAATGGTAAA+TGG | 0.306946 | 1.4:+33614135 | None:intergenic |
ATGTGCAGGTTGTTCGCTTT+AGG | 0.310881 | 1.4:-33607875 | MS.gene43329:intron |
CACCACCACTCCTCCGTTAG+AGG | 0.318183 | 1.4:-33625151 | MS.gene43329:intron |
AAAATCATATACCTTGAAAA+TGG | 0.319334 | 1.4:+33614128 | None:intergenic |
ATGATGTCCAAGAACTTAAC+AGG | 0.326745 | 1.4:-33618478 | MS.gene43329:CDS |
TTGGCCGAAATGTATGGTTT+TGG | 0.327148 | 1.4:+33613316 | None:intergenic |
ACAGTTAAGGGAAGTTAATA+AGG | 0.335759 | 1.4:-33611258 | MS.gene43329:CDS |
GAAGAAGTTGCGAAAGAGTT+TGG | 0.339349 | 1.4:-33613381 | MS.gene43329:CDS |
TGCAGAGCAGTATGGTTTAC+AGG | 0.343261 | 1.4:-33618010 | MS.gene43329:intron |
TCTGATGCTGTTGTTGTTGA+AGG | 0.347454 | 1.4:-33624896 | MS.gene43329:CDS |
GTTCACAGCGGTGGAGTTCA+TGG | 0.349100 | 1.4:-33615641 | MS.gene43329:CDS |
AATACCTGTGAAGTGTATAA+AGG | 0.350377 | 1.4:+33617305 | None:intergenic |
CAGCTTAACTGTGGTCAATC+AGG | 0.357604 | 1.4:-33622887 | MS.gene43329:CDS |
CTGATAATATATTACCTGAT+TGG | 0.359026 | 1.4:+33602536 | None:intergenic |
TGCATTCAATATAGTTCATA+TGG | 0.361714 | 1.4:+33618256 | None:intergenic |
TGCGCAAAGATCTTGATTAC+TGG | 0.363993 | 1.4:-33618852 | MS.gene43329:CDS |
TGTATCCCATCCAAAAGATT+TGG | 0.366228 | 1.4:+33618520 | None:intergenic |
ATTGTTTGTTTGCAGTGTTT+TGG | 0.368572 | 1.4:-33615663 | MS.gene43329:intron |
AACTCCTCTTTCAGCTTCTC+AGG | 0.378745 | 1.4:+33611040 | None:intergenic |
CAGTTACCTCTTACAAATCC+TGG | 0.380141 | 1.4:-33614679 | MS.gene43329:CDS |
GGTGATCTGCACGAGCAAAT+TGG | 0.393840 | 1.4:-33614225 | MS.gene43329:CDS |
GAAGTTAATAAGGCAAATAA+TGG | 0.394667 | 1.4:-33611248 | MS.gene43329:CDS |
TACCTAAGCTTCTGACTTGA+AGG | 0.400009 | 1.4:+33610992 | None:intergenic |
TCAAAGAATGAAGGAACATC+TGG | 0.402453 | 1.4:+33610137 | None:intergenic |
AGCTTCTTCAATATATCTAC+TGG | 0.403647 | 1.4:+33610705 | None:intergenic |
AAGACTGAACTCATCTTCCT+TGG | 0.405749 | 1.4:+33607839 | None:intergenic |
AACAGATCAATTTCTTCATC+CGG | 0.405961 | 1.4:+33610660 | None:intergenic |
AGTACTGGATATTCCTCTTC+CGG | 0.405994 | 1.4:-33607372 | MS.gene43329:CDS |
ATCATTTAAACCAAGATGTT+GGG | 0.406632 | 1.4:+33607668 | None:intergenic |
GGATATATTCTTTGATCTTG+TGG | 0.407652 | 1.4:-33614199 | MS.gene43329:CDS |
TTAATGCTCGTGAGAGTGAT+TGG | 0.408912 | 1.4:-33618969 | MS.gene43329:CDS |
TACCTGATTGTCACGAAAAG+TGG | 0.409677 | 1.4:+33610492 | None:intergenic |
TCCTGATGCGGAACTTAGAT+TGG | 0.416213 | 1.4:-33606740 | MS.gene43329:CDS |
TACTTGATAGGCTGTGGTTT+AGG | 0.419413 | 1.4:+33607600 | None:intergenic |
GTTTAAATTCGATGATGAAC+GGG | 0.420574 | 1.4:-33614882 | MS.gene43329:CDS |
GCAGTTGAGGATCCGCCAAT+TGG | 0.421045 | 1.4:-33623214 | MS.gene43329:CDS |
ATTGAAGAAGCTAAATGAAA+TGG | 0.421894 | 1.4:-33610694 | MS.gene43329:CDS |
ACTGAAAATGACATGCCATC+TGG | 0.421936 | 1.4:-33618620 | MS.gene43329:CDS |
TAATGCTCGTGAGAGTGATT+GGG | 0.422807 | 1.4:-33618968 | MS.gene43329:CDS |
ACAACAACAGCATCAGAGTT+AGG | 0.423777 | 1.4:+33624902 | None:intergenic |
GGCGCATGGGAGCAATATCT+TGG | 0.424428 | 1.4:-33602600 | MS.gene43329:CDS |
AGCGCCAAAACCATACATTT+CGG | 0.425954 | 1.4:-33613320 | MS.gene43329:CDS |
TGTCACGAAAAGTGGACTTC+TGG | 0.426149 | 1.4:+33610500 | None:intergenic |
TAACAAAAGAAGATACAAAC+AGG | 0.426292 | 1.4:-33614859 | MS.gene43329:CDS |
CCTATCAAGATCTAATTGTA+AGG | 0.427249 | 1.4:+33617375 | None:intergenic |
TTTAGCTGATGTCAAATTGC+GGG | 0.427811 | 1.4:-33604214 | MS.gene43329:CDS |
AGCTTCTCAGGAGGACGAAT+AGG | 0.428537 | 1.4:+33611052 | None:intergenic |
GATGCAGGTTCGATGCCTTA+TGG | 0.430192 | 1.4:-33622931 | MS.gene43329:CDS |
ACATCGGAATAATGTTTCTT+CGG | 0.432526 | 1.4:+33623154 | None:intergenic |
TGAGCTGTCACTGGTCTACT+TGG | 0.432854 | 1.4:+33613297 | None:intergenic |
ACCAATCTAAGTTCCGCATC+AGG | 0.434745 | 1.4:+33606739 | None:intergenic |
TATCAGCATGTTCAGAACTT+TGG | 0.437054 | 1.4:-33604273 | MS.gene43329:intron |
TAGATCTTGATAGGGATAAT+GGG | 0.437845 | 1.4:-33617366 | MS.gene43329:CDS |
AAGATCATATACAGCCAATC+AGG | 0.438368 | 1.4:-33602550 | MS.gene43329:intron |
GTGTAGAGAAGGGACATATA+TGG | 0.439109 | 1.4:-33602621 | MS.gene43329:intron |
TTTGTTTCGTCAGGTATGTT+GGG | 0.439184 | 1.4:-33610755 | MS.gene43329:intron |
TGCACATATTCAAAGAATGA+AGG | 0.441001 | 1.4:+33610128 | None:intergenic |
GTCTACTTGGCCGAAATGTA+TGG | 0.442229 | 1.4:+33613310 | None:intergenic |
GACAGCTCAGGAGGAAGCAC+AGG | 0.444220 | 1.4:-33613283 | MS.gene43329:CDS |
GATCATTTAAACCAAGATGT+TGG | 0.445357 | 1.4:+33607667 | None:intergenic |
TTCTTCAGCTTCAGTTAAAA+CGG | 0.445451 | 1.4:-33617826 | MS.gene43329:CDS |
AGACTGAACTCATCTTCCTT+GGG | 0.445842 | 1.4:+33607840 | None:intergenic |
TCCACTCCTCGGTACTTGAT+AGG | 0.447422 | 1.4:+33607588 | None:intergenic |
GCCATCTGGGAGCATCCCTC+TGG | 0.451352 | 1.4:-33618606 | MS.gene43329:CDS |
AAGTATCATGCAGAGCAGTA+TGG | 0.452897 | 1.4:-33618018 | MS.gene43329:CDS |
AGAGAAGAAGAAGAAGGAAA+AGG | 0.454355 | 1.4:-33614415 | MS.gene43329:CDS |
GAAAGAGTCTCCCAACATCT+TGG | 0.457657 | 1.4:-33607678 | MS.gene43329:CDS |
CGAATACTTCTGTCTGCGTC+AGG | 0.461639 | 1.4:+33617331 | None:intergenic |
GCTGTCCATCGCCAGCTGGA+GGG | 0.462001 | 1.4:+33610174 | None:intergenic |
TTCTTCTTGGTTATCCGTGA+GGG | 0.464212 | 1.4:-33604243 | MS.gene43329:CDS |
AAATAATATCTGAATCTTGA+AGG | 0.466489 | 1.4:+33602797 | None:intergenic |
TGTTCAGCATTGTTCCCCTT+CGG | 0.468250 | 1.4:+33622979 | None:intergenic |
AGTAAATATTCCGTCAGAAA+AGG | 0.469439 | 1.4:-33622859 | MS.gene43329:intron |
TGCTGCTGTCCATCGCCAGC+TGG | 0.470315 | 1.4:+33610170 | None:intergenic |
AAGTTTGCATTTGTCTCACT+TGG | 0.470391 | 1.4:-33602832 | MS.gene43329:CDS |
TTTAACTGAAGCTGAAGAAC+AGG | 0.471336 | 1.4:+33617830 | None:intergenic |
TGCTGTCCATCGCCAGCTGG+AGG | 0.475831 | 1.4:+33610173 | None:intergenic |
GCTTCCTCCTGAGCTGTCAC+TGG | 0.476962 | 1.4:+33613288 | None:intergenic |
TGAAGAAATTGATCTGTTTG+AGG | 0.478272 | 1.4:-33610655 | MS.gene43329:intron |
ACCACTGATTTGAAAGAGTC+GGG | 0.480454 | 1.4:+33615594 | None:intergenic |
TATATAGATGTTGCAGATGC+AGG | 0.480586 | 1.4:-33622946 | MS.gene43329:CDS |
GTCCATGTGAATCTCCCAAT+TGG | 0.481266 | 1.4:+33623199 | None:intergenic |
CAGTTGAGGATCCGCCAATT+GGG | 0.486788 | 1.4:-33623213 | MS.gene43329:CDS |
AACCTTCAAGTCAGAAGCTT+AGG | 0.487223 | 1.4:-33610994 | MS.gene43329:intron |
GCAGTATGGTGGTGAAGAAG+AGG | 0.488818 | 1.4:-33614825 | MS.gene43329:intron |
TCACATTCCTTATTTCAGAA+AGG | 0.489887 | 1.4:-33618740 | MS.gene43329:intron |
CTGAAAATGACATGCCATCT+GGG | 0.491155 | 1.4:-33618619 | MS.gene43329:CDS |
TCATGTAACAAGTAGCTCCT+TGG | 0.493061 | 1.4:+33618785 | None:intergenic |
TTGAACCCAGGATTTGTAAG+AGG | 0.493196 | 1.4:+33614673 | None:intergenic |
TGTTGAAGGTCCTCAACCTA+TGG | 0.497121 | 1.4:-33624882 | MS.gene43329:CDS |
GACAGTACTAACTTCATCCT+TGG | 0.498344 | 1.4:+33607304 | None:intergenic |
TCACGGATAACCAAGAAGAA+AGG | 0.501850 | 1.4:+33604246 | None:intergenic |
TATTCTATACTATGAAGTAC+TGG | 0.503709 | 1.4:-33607387 | MS.gene43329:CDS |
TGCGCGAGACACTATGGTAA+AGG | 0.504586 | 1.4:-33617789 | MS.gene43329:intron |
AGGCTGTGGTTTAGGTTGCT+GGG | 0.507211 | 1.4:+33607608 | None:intergenic |
AAGTAGACCAGTGACAGCTC+AGG | 0.509457 | 1.4:-33613295 | MS.gene43329:CDS |
TGAAATTACCTGAAACCGAC+TGG | 0.510922 | 1.4:+33602774 | None:intergenic |
CTGTCCATCGCCAGCTGGAG+GGG | 0.511522 | 1.4:+33610175 | None:intergenic |
ACATTACCTTCCATAGGTTG+AGG | 0.511644 | 1.4:+33624872 | None:intergenic |
CCTCGGTACTTGATAGGCTG+TGG | 0.514217 | 1.4:+33607594 | None:intergenic |
TTTCAGAAGTCCCCTCCAGC+TGG | 0.515119 | 1.4:-33610185 | MS.gene43329:CDS |
CAGGTTCGATGCCTTATGGT+TGG | 0.516574 | 1.4:-33622927 | MS.gene43329:CDS |
AAGGTTAAAGAAAGAACAAG+AGG | 0.516827 | 1.4:-33614442 | MS.gene43329:CDS |
GGATCAATTGTCTGACATGC+TGG | 0.517533 | 1.4:-33607568 | MS.gene43329:CDS |
AAGAAGCTAAATGAAATGGC+TGG | 0.524068 | 1.4:-33610690 | MS.gene43329:CDS |
AAGTCCCCTCCAGCTGGCGA+TGG | 0.524459 | 1.4:-33610179 | MS.gene43329:CDS |
CATGCTGGTTCACTACAATC+AGG | 0.525999 | 1.4:-33607553 | MS.gene43329:intron |
CACGGATAACCAAGAAGAAA+GGG | 0.528312 | 1.4:+33604247 | None:intergenic |
ACAGCTTACTTGAAGGTGGC+TGG | 0.530996 | 1.4:+33614543 | None:intergenic |
GGTTTAAATTCGATGATGAA+CGG | 0.531000 | 1.4:-33614883 | MS.gene43329:CDS |
AGGGCTTTAGAAGAGCAGTA+TGG | 0.531445 | 1.4:-33614839 | MS.gene43329:CDS |
TCCTCCTGAGAAGCTGAAAG+AGG | 0.531760 | 1.4:-33611044 | MS.gene43329:CDS |
CTTCATCCTTGGCATCATGA+TGG | 0.536314 | 1.4:+33607315 | None:intergenic |
CCGGAAGAAGAGAAAAGCCT+TGG | 0.537812 | 1.4:-33604499 | MS.gene43329:CDS |
TGAAATGGCTGGATTTGATC+CGG | 0.539715 | 1.4:-33610679 | MS.gene43329:CDS |
GCAACCTTTATACACTTCAC+AGG | 0.539923 | 1.4:-33617309 | MS.gene43329:intron |
GCAAATCTAGTCCAACCATA+AGG | 0.541036 | 1.4:+33622916 | None:intergenic |
TGCTTTCCATCATGATGCCA+AGG | 0.543330 | 1.4:-33607321 | MS.gene43329:CDS |
CTTACAATTAGATCTTGATA+GGG | 0.543468 | 1.4:-33617374 | MS.gene43329:CDS |
ACTATACAGAAGTTGTTTGA+AGG | 0.544486 | 1.4:-33618282 | MS.gene43329:CDS |
GCGCAAAGATCTTGATTACT+GGG | 0.546659 | 1.4:-33618851 | MS.gene43329:CDS |
TTTGGAAATAGAAATGGGGC+AGG | 0.547008 | 1.4:-33611210 | MS.gene43329:intron |
AAAGCCTTGGCCCTCACGAT+CGG | 0.547788 | 1.4:-33604486 | MS.gene43329:CDS |
AGTGGATGCTGTGGCAGTTG+AGG | 0.548648 | 1.4:-33623227 | MS.gene43329:CDS |
CTATCAAGATCTAATTGTAA+GGG | 0.549176 | 1.4:+33617376 | None:intergenic |
AACAAACTCTGTAATGCCAG+AGG | 0.550134 | 1.4:+33618590 | None:intergenic |
AGTTACCTCTTACAAATCCT+GGG | 0.555665 | 1.4:-33614678 | MS.gene43329:CDS |
GAAGGGACATATATGGCGCA+TGG | 0.556422 | 1.4:-33602614 | MS.gene43329:CDS |
TACCACTGATTTGAAAGAGT+CGG | 0.558010 | 1.4:+33615593 | None:intergenic |
GGATAAGATAATTTGTAATG+TGG | 0.558559 | 1.4:-33614581 | MS.gene43329:CDS |
AAAGGAGAGTTGTTGAACCC+AGG | 0.558997 | 1.4:+33614661 | None:intergenic |
TCATTTGTACACCATTGTAA+AGG | 0.565109 | 1.4:-33614385 | MS.gene43329:intron |
AATTTGTAATGTGGATGAGA+AGG | 0.565506 | 1.4:-33614572 | MS.gene43329:CDS |
GTGGAAGTAGAACAGCTTGA+GGG | 0.565647 | 1.4:-33618048 | MS.gene43329:CDS |
GATCTTCAGCTTGATGTCAA+AGG | 0.567722 | 1.4:-33618105 | MS.gene43329:CDS |
TCTGAATCTTGAAGGTACTC+AGG | 0.573337 | 1.4:+33602805 | None:intergenic |
AACTGAAGCTGAAGAACAGG+TGG | 0.576147 | 1.4:+33617833 | None:intergenic |
TTTCAGGGAACTGTTGTGGA+AGG | 0.577078 | 1.4:-33618306 | MS.gene43329:intron |
CACATTACATTACCTTCCAT+AGG | 0.578268 | 1.4:+33624866 | None:intergenic |
AATTAATGATCTAAAATCAA+AGG | 0.578639 | 1.4:-33607158 | MS.gene43329:intron |
TTTCTTCTTGGTTATCCGTG+AGG | 0.579843 | 1.4:-33604244 | MS.gene43329:CDS |
TCCTCTTTCAGCTTCTCAGG+AGG | 0.580821 | 1.4:+33611043 | None:intergenic |
CGCCAATTGGGAGATTCACA+TGG | 0.581165 | 1.4:-33623201 | MS.gene43329:CDS |
AATGCTCGTGAGAGTGATTG+GGG | 0.581175 | 1.4:-33618967 | MS.gene43329:CDS |
GCCCGACTCTTTCAAATCAG+TGG | 0.582908 | 1.4:-33615595 | MS.gene43329:intron |
ACATGTATCATCCGATCGTG+AGG | 0.587253 | 1.4:+33604475 | None:intergenic |
GAAGTTGCAAGTTCCAAATG+AGG | 0.588855 | 1.4:-33604184 | MS.gene43329:CDS |
TCATCCGATCGTGAGGGCCA+AGG | 0.590873 | 1.4:+33604482 | None:intergenic |
GAAGAAGAAGGAAAAGGCTG+AGG | 0.591544 | 1.4:-33614409 | MS.gene43329:CDS |
GTTTCGTCAGGTATGTTGGG+AGG | 0.596574 | 1.4:-33610752 | MS.gene43329:intron |
TCCACAACATAGCCTCTACT+AGG | 0.596783 | 1.4:+33618907 | None:intergenic |
GCGGATACTGATCTTTCCGA+AGG | 0.601985 | 1.4:-33622995 | MS.gene43329:CDS |
TAGACCAGTGACAGCTCAGG+AGG | 0.602851 | 1.4:-33613292 | MS.gene43329:CDS |
TGGCCCCAGATTGCTCGTGA+TGG | 0.603321 | 1.4:-33614246 | MS.gene43329:intron |
AGACACTGCTCAAAATCAGA+TGG | 0.603971 | 1.4:-33604437 | MS.gene43329:intron |
CACAAGTACAGTGGATGCTG+TGG | 0.605419 | 1.4:-33623236 | MS.gene43329:CDS |
GCGCGATTGATTACCTCTAA+CGG | 0.606323 | 1.4:+33625138 | None:intergenic |
AAAGCTAGAAGACAAAATGA+AGG | 0.607281 | 1.4:-33618444 | MS.gene43329:intron |
CGGATACTGATCTTTCCGAA+GGG | 0.607412 | 1.4:-33622994 | MS.gene43329:CDS |
AAGGGACATATATGGCGCAT+GGG | 0.608106 | 1.4:-33602613 | MS.gene43329:CDS |
GCCTATCAAGTACCGAGGAG+TGG | 0.608291 | 1.4:-33607589 | MS.gene43329:CDS |
CATGTGAATCTCCCAATTGG+CGG | 0.608755 | 1.4:+33623202 | None:intergenic |
TGTGGAAGTAGAACAGCTTG+AGG | 0.609687 | 1.4:-33618049 | MS.gene43329:CDS |
TTGGACATTACGAGCAGAGG+AGG | 0.609951 | 1.4:-33605759 | MS.gene43329:intron |
TACCTCTAACGGAGGAGTGG+TGG | 0.610470 | 1.4:+33625149 | None:intergenic |
TATCAAGATCTAATTGTAAG+GGG | 0.610556 | 1.4:+33617377 | None:intergenic |
GCCAGAGGGATGCTCCCAGA+TGG | 0.612314 | 1.4:+33618605 | None:intergenic |
ATTCAGATATTATTTCCAGT+CGG | 0.612576 | 1.4:-33602789 | MS.gene43329:CDS |
TTATTGGACATTACGAGCAG+AGG | 0.613030 | 1.4:-33605762 | MS.gene43329:CDS |
GGATCATACAATTCAGCAAG+AGG | 0.617299 | 1.4:+33618928 | None:intergenic |
ATGGGAGCAATATCTTGGAC+TGG | 0.619256 | 1.4:-33602595 | MS.gene43329:CDS |
CTTTAGCTGATGTCAAATTG+CGG | 0.620059 | 1.4:-33604215 | MS.gene43329:CDS |
TAGAGTTGTGACCTTTACAA+TGG | 0.624579 | 1.4:+33614374 | None:intergenic |
ACAAACTCTGTAATGCCAGA+GGG | 0.625922 | 1.4:+33618591 | None:intergenic |
TCCTAGTAGAGGCTATGTTG+TGG | 0.625984 | 1.4:-33618908 | MS.gene43329:CDS |
CAGCTAAAGTCTCACCCTCA+CGG | 0.627905 | 1.4:+33604229 | None:intergenic |
CATGTATCATCCGATCGTGA+GGG | 0.628501 | 1.4:+33604476 | None:intergenic |
GAAGGTCCTCAACCTATGGA+AGG | 0.631259 | 1.4:-33624878 | MS.gene43329:intron |
CTATGTTCGTGAAAGTGACA+AGG | 0.634378 | 1.4:-33614602 | MS.gene43329:CDS |
TGCACAGTTCAGCTTAACTG+TGG | 0.636127 | 1.4:-33622896 | MS.gene43329:CDS |
AGGAGTGGTGGTGATAGTCA+TGG | 0.638641 | 1.4:+33625161 | None:intergenic |
TCAGACAGCTTACTTGAAGG+TGG | 0.638803 | 1.4:+33614539 | None:intergenic |
GAATTGTATGATCCTAGTAG+AGG | 0.640831 | 1.4:-33618919 | MS.gene43329:CDS |
GATTACCTCTAACGGAGGAG+TGG | 0.641206 | 1.4:+33625146 | None:intergenic |
CTATATTGAATGCATGAATG+TGG | 0.644705 | 1.4:-33618247 | MS.gene43329:CDS |
ATTCAATATAGTTCATATGG+TGG | 0.646922 | 1.4:+33618259 | None:intergenic |
CAGACAATTGATCCACTCCT+CGG | 0.649064 | 1.4:+33607577 | None:intergenic |
AGCAGAAAACACAAGTACAG+TGG | 0.653432 | 1.4:-33623245 | MS.gene43329:CDS |
AGATTTATCACATCCTGATG+CGG | 0.653603 | 1.4:-33606752 | MS.gene43329:CDS |
ATTTAATCACAAGATCTACA+AGG | 0.653653 | 1.4:-33606710 | MS.gene43329:intron |
CGATTGATTACCTCTAACGG+AGG | 0.653813 | 1.4:+33625141 | None:intergenic |
GTAGCAACAGAATCTTGAAG+AGG | 0.654441 | 1.4:-33624942 | MS.gene43329:intron |
TCTGCACGAGCAAATTGGAA+AGG | 0.658941 | 1.4:-33614220 | MS.gene43329:CDS |
GCTTTAGAAGAGCAGTATGG+TGG | 0.667170 | 1.4:-33614836 | MS.gene43329:CDS |
GCCACCAATAGTGAAAACAT+CGG | 0.685681 | 1.4:+33623138 | None:intergenic |
ATTGTAAGGGGAACTCATAG+CGG | 0.696550 | 1.4:+33617389 | None:intergenic |
GGATACTGATCTTTCCGAAG+GGG | 0.700894 | 1.4:-33622993 | MS.gene43329:CDS |
CACAGCGGTGGAGTTCATGG+TGG | 0.712784 | 1.4:-33615638 | MS.gene43329:CDS |
ATTACAGAAGCACAGTACTG+TGG | 0.712888 | 1.4:-33607188 | MS.gene43329:CDS |
TGATGTCCAAGAACTTAACA+GGG | 0.715890 | 1.4:-33618477 | MS.gene43329:CDS |
CCACAGCCTATCAAGTACCG+AGG | 0.734770 | 1.4:-33607594 | MS.gene43329:CDS |
AACAAAAGAAGATACAAACA+GGG | 0.741092 | 1.4:-33614858 | MS.gene43329:CDS |
GGAAGACAGATGCATACTTG+AGG | 0.749512 | 1.4:-33618887 | MS.gene43329:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 33602019 | 33625181 | 33602019 | ID=MS.gene43329 |
chr1.4 | mRNA | 33602019 | 33625181 | 33602019 | ID=MS.gene43329.t1;Parent=MS.gene43329 |
chr1.4 | exon | 33625152 | 33625181 | 33625152 | ID=MS.gene43329.t1.exon1;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33625152 | 33625181 | 33625152 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33624879 | 33624960 | 33624879 | ID=MS.gene43329.t1.exon2;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33624879 | 33624960 | 33624879 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33623130 | 33623274 | 33623130 | ID=MS.gene43329.t1.exon3;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33623130 | 33623274 | 33623130 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33622860 | 33623017 | 33622860 | ID=MS.gene43329.t1.exon4;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33622860 | 33623017 | 33622860 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33618741 | 33619006 | 33618741 | ID=MS.gene43329.t1.exon5;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33618741 | 33619006 | 33618741 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33618445 | 33618663 | 33618445 | ID=MS.gene43329.t1.exon6;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33618445 | 33618663 | 33618445 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33618214 | 33618322 | 33618214 | ID=MS.gene43329.t1.exon7;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33618214 | 33618322 | 33618214 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33618011 | 33618126 | 33618011 | ID=MS.gene43329.t1.exon8;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33618011 | 33618126 | 33618011 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33617790 | 33617888 | 33617790 | ID=MS.gene43329.t1.exon9;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33617790 | 33617888 | 33617790 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33617310 | 33617419 | 33617310 | ID=MS.gene43329.t1.exon10;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33617310 | 33617419 | 33617310 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33615596 | 33615670 | 33615596 | ID=MS.gene43329.t1.exon11;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33615596 | 33615670 | 33615596 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33614826 | 33614904 | 33614826 | ID=MS.gene43329.t1.exon12;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33614826 | 33614904 | 33614826 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33614552 | 33614698 | 33614552 | ID=MS.gene43329.t1.exon13;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33614552 | 33614698 | 33614552 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33614386 | 33614466 | 33614386 | ID=MS.gene43329.t1.exon14;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33614386 | 33614466 | 33614386 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33614140 | 33614259 | 33614140 | ID=MS.gene43329.t1.exon15;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33614140 | 33614259 | 33614140 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33613281 | 33613403 | 33613281 | ID=MS.gene43329.t1.exon16;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33613281 | 33613403 | 33613281 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33611211 | 33611285 | 33611211 | ID=MS.gene43329.t1.exon17;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33611211 | 33611285 | 33611211 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33610995 | 33611083 | 33610995 | ID=MS.gene43329.t1.exon18;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33610995 | 33611083 | 33610995 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33610656 | 33610764 | 33610656 | ID=MS.gene43329.t1.exon19;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33610656 | 33610764 | 33610656 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33610495 | 33610563 | 33610495 | ID=MS.gene43329.t1.exon20;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33610495 | 33610563 | 33610495 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33610118 | 33610231 | 33610118 | ID=MS.gene43329.t1.exon21;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33610118 | 33610231 | 33610118 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33607834 | 33607889 | 33607834 | ID=MS.gene43329.t1.exon22;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33607834 | 33607889 | 33607834 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33607554 | 33607731 | 33607554 | ID=MS.gene43329.t1.exon23;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33607554 | 33607731 | 33607554 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33607316 | 33607417 | 33607316 | ID=MS.gene43329.t1.exon24;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33607316 | 33607417 | 33607316 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33607159 | 33607224 | 33607159 | ID=MS.gene43329.t1.exon25;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33607159 | 33607224 | 33607159 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33606711 | 33606776 | 33606711 | ID=MS.gene43329.t1.exon26;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33606711 | 33606776 | 33606711 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33605760 | 33605825 | 33605760 | ID=MS.gene43329.t1.exon27;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33605760 | 33605825 | 33605760 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33604438 | 33604524 | 33604438 | ID=MS.gene43329.t1.exon28;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33604438 | 33604524 | 33604438 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33604173 | 33604289 | 33604173 | ID=MS.gene43329.t1.exon29;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33604173 | 33604289 | 33604173 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33602783 | 33602857 | 33602783 | ID=MS.gene43329.t1.exon30;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33602783 | 33602857 | 33602783 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33602551 | 33602637 | 33602551 | ID=MS.gene43329.t1.exon31;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33602551 | 33602637 | 33602551 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
chr1.4 | exon | 33602019 | 33602060 | 33602019 | ID=MS.gene43329.t1.exon32;Parent=MS.gene43329.t1 |
chr1.4 | CDS | 33602019 | 33602060 | 33602019 | ID=cds.MS.gene43329.t1;Parent=MS.gene43329.t1 |
Gene Sequence |
Protein sequence |