Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43531.t1 | XP_003611556.1 | 97.4 | 420 | 11 | 0 | 1 | 420 | 15 | 434 | 1.80E-252 | 881.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43531.t1 | Q564G7 | 63.4 | 429 | 140 | 4 | 1 | 419 | 1 | 422 | 6.4e-166 | 585.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43531.t1 | G7K2G3 | 97.4 | 420 | 11 | 0 | 1 | 420 | 15 | 434 | 1.3e-252 | 881.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene43531 | 0.818817 | 1.61E-52 | -1.69E-46 |
| MS.gene056228 | MS.gene43531 | 0.808495 | 3.01E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43531.t1 | MTR_5g015260 | 96.698 | 424 | 14 | 0 | 1 | 424 | 15 | 438 | 0.0 | 859 |
| MS.gene43531.t1 | MTR_4g097240 | 64.371 | 421 | 137 | 4 | 7 | 419 | 8 | 423 | 0.0 | 571 |
| MS.gene43531.t1 | MTR_4g097230 | 57.500 | 360 | 144 | 2 | 67 | 423 | 60 | 413 | 9.60e-160 | 457 |
| MS.gene43531.t1 | MTR_4g108940 | 47.143 | 350 | 145 | 7 | 71 | 417 | 100 | 412 | 8.43e-111 | 333 |
| MS.gene43531.t1 | MTR_4g119880 | 45.665 | 346 | 150 | 6 | 76 | 418 | 107 | 417 | 7.93e-110 | 331 |
| MS.gene43531.t1 | MTR_7g108675 | 45.882 | 340 | 146 | 6 | 81 | 417 | 124 | 428 | 1.16e-108 | 328 |
| MS.gene43531.t1 | MTR_3g037340 | 40.662 | 423 | 202 | 10 | 5 | 417 | 34 | 417 | 2.23e-106 | 322 |
| MS.gene43531.t1 | MTR_8g058553 | 45.706 | 326 | 139 | 6 | 81 | 403 | 124 | 414 | 2.18e-101 | 312 |
| MS.gene43531.t1 | MTR_4g108950 | 46.154 | 78 | 39 | 3 | 336 | 412 | 8 | 83 | 3.57e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43531.t1 | AT2G22900 | 63.723 | 419 | 149 | 2 | 1 | 418 | 16 | 432 | 0.0 | 554 |
| MS.gene43531.t1 | AT4G37690 | 61.005 | 418 | 158 | 2 | 1 | 417 | 1 | 414 | 0.0 | 544 |
| MS.gene43531.t1 | AT5G07720 | 41.038 | 424 | 204 | 7 | 3 | 417 | 35 | 421 | 5.50e-115 | 344 |
| MS.gene43531.t1 | AT3G62720 | 47.507 | 341 | 141 | 6 | 81 | 418 | 117 | 422 | 1.97e-111 | 335 |
| MS.gene43531.t1 | AT3G62720 | 47.507 | 341 | 141 | 6 | 81 | 418 | 117 | 422 | 1.97e-111 | 335 |
| MS.gene43531.t1 | AT1G18690 | 43.767 | 377 | 173 | 6 | 43 | 417 | 141 | 480 | 9.32e-111 | 335 |
| MS.gene43531.t1 | AT1G18690 | 43.767 | 377 | 173 | 6 | 43 | 417 | 141 | 480 | 9.32e-111 | 335 |
| MS.gene43531.t1 | AT1G18690 | 43.767 | 377 | 173 | 6 | 43 | 417 | 141 | 480 | 9.32e-111 | 335 |
| MS.gene43531.t1 | AT1G18690 | 43.767 | 377 | 173 | 6 | 43 | 417 | 141 | 480 | 9.32e-111 | 335 |
| MS.gene43531.t1 | AT1G74380 | 45.349 | 344 | 151 | 5 | 76 | 417 | 114 | 422 | 8.45e-110 | 331 |
| MS.gene43531.t1 | AT4G02500 | 44.509 | 346 | 154 | 4 | 76 | 418 | 113 | 423 | 8.05e-108 | 326 |
| MS.gene43531.t1 | AT4G38310 | 69.231 | 117 | 35 | 1 | 64 | 179 | 1 | 117 | 2.66e-55 | 179 |
Find 106 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCAAGTTATTCGTAAATT+TGG | 0.144278 | 5.3:-8283127 | MS.gene43531:CDS |
| TCCTAAGATGTTTGCTTATT+GGG | 0.175052 | 5.3:-8283863 | MS.gene43531:CDS |
| TTCATCCCAGTCGTCTATTT+TGG | 0.194915 | 5.3:+8284083 | None:intergenic |
| ATCCTAAGATGTTTGCTTAT+TGG | 0.207679 | 5.3:-8283864 | MS.gene43531:CDS |
| TATAGAAGAAGATTTGTTTC+TGG | 0.226424 | 5.3:+8284320 | None:intergenic |
| CACCAGATCCACTCTGCTTC+TGG | 0.247207 | 5.3:+8283802 | None:intergenic |
| TTACCCCATTCTTCATAATC+TGG | 0.296788 | 5.3:+8283571 | None:intergenic |
| GTCATGGTATACTCCATTTC+AGG | 0.314443 | 5.3:+8284108 | None:intergenic |
| ATAGAAGAAGATTTGTTTCT+GGG | 0.318466 | 5.3:+8284321 | None:intergenic |
| ATGGAGGCTTGGGCTGGAAT+GGG | 0.324947 | 5.3:-8283604 | MS.gene43531:CDS |
| CATGGAGGCTTGGGCTGGAA+TGG | 0.334539 | 5.3:-8283605 | MS.gene43531:CDS |
| GCCCAATAAGCAAACATCTT+AGG | 0.336434 | 5.3:+8283862 | None:intergenic |
| TTAAGGTGAGGTTGTCGTTT+GGG | 0.336884 | 5.3:+8284211 | None:intergenic |
| AATATTACTTCGAGGGGTAT+TGG | 0.338476 | 5.3:-8283429 | MS.gene43531:CDS |
| GTGGATTACTCTCGTATTCA+TGG | 0.344402 | 5.3:-8283919 | MS.gene43531:CDS |
| TCTGATGGCTTCCTCTTCCT+TGG | 0.345544 | 5.3:-8284291 | MS.gene43531:CDS |
| TCAATGGTCATTAGATTTCA+TGG | 0.346153 | 5.3:-8283623 | MS.gene43531:CDS |
| CAGGATCATCGTAGAATGTT+TGG | 0.347067 | 5.3:+8284127 | None:intergenic |
| AACAACAAATGGTCACCTAT+TGG | 0.350530 | 5.3:+8283961 | None:intergenic |
| GTGAGGTTGTCGTTTGGGAT+GGG | 0.352772 | 5.3:+8284216 | None:intergenic |
| TCTTCATAATCTGGGCTTTG+TGG | 0.354799 | 5.3:+8283580 | None:intergenic |
| GATCATAACCTTGTTGTTCA+TGG | 0.356395 | 5.3:-8283718 | MS.gene43531:CDS |
| ATCATTGCAGCTTTCACAAC+AGG | 0.362566 | 5.3:+8283832 | None:intergenic |
| ATTAGATTTCATGGAGGCTT+GGG | 0.362925 | 5.3:-8283614 | MS.gene43531:CDS |
| CATGAGAAACGGAGCTGGAC+TGG | 0.370520 | 5.3:-8283679 | MS.gene43531:CDS |
| ATATTACTTCGAGGGGTATT+GGG | 0.374107 | 5.3:-8283428 | MS.gene43531:CDS |
| CATAAAGATCTTGGGGATAA+TGG | 0.376635 | 5.3:-8283097 | MS.gene43531:intron |
| CATTAGATTTCATGGAGGCT+TGG | 0.381012 | 5.3:-8283615 | MS.gene43531:CDS |
| GGTGAGGTTGTCGTTTGGGA+TGG | 0.382979 | 5.3:+8284215 | None:intergenic |
| GAAGATTTGTTTCTGGGAAT+GGG | 0.385239 | 5.3:+8284327 | None:intergenic |
| TATTTGAAAGATGCTGGTTA+TGG | 0.388530 | 5.3:-8283280 | MS.gene43531:CDS |
| AGAAGATTTGTTTCTGGGAA+TGG | 0.391546 | 5.3:+8284326 | None:intergenic |
| TGAAGAATCTTAACAACAAA+TGG | 0.394171 | 5.3:+8283950 | None:intergenic |
| CTGGTTATGGTAAAGGAAGT+TGG | 0.399264 | 5.3:-8283267 | MS.gene43531:CDS |
| TGAGGTTGTCGTTTGGGATG+GGG | 0.405083 | 5.3:+8284217 | None:intergenic |
| TGTACACTGCTGATGCTTGT+TGG | 0.406742 | 5.3:-8283183 | MS.gene43531:CDS |
| GAAGAGTATTTGAAAGATGC+TGG | 0.407850 | 5.3:-8283286 | MS.gene43531:CDS |
| CTTCATAATCTGGGCTTTGT+GGG | 0.412052 | 5.3:+8283581 | None:intergenic |
| TCTTCTATATTTCTCTCTGA+TGG | 0.418803 | 5.3:-8284306 | MS.gene43531:CDS |
| ATCCAGAAGCAGAGTGGATC+TGG | 0.420997 | 5.3:-8283804 | MS.gene43531:CDS |
| TTTAAGGTGAGGTTGTCGTT+TGG | 0.424610 | 5.3:+8284210 | None:intergenic |
| GATGGCTTCCTCTTCCTTGG+AGG | 0.432600 | 5.3:-8284288 | MS.gene43531:CDS |
| TACCCCATTCTTCATAATCT+GGG | 0.433806 | 5.3:+8283572 | None:intergenic |
| AGCAAAGGAAAGAGTGTTGA+TGG | 0.438346 | 5.3:-8284016 | MS.gene43531:CDS |
| ATAACCTTGTTGTTCATGGC+TGG | 0.442241 | 5.3:-8283714 | MS.gene43531:CDS |
| AAAGATGCTGGTTATGGTAA+AGG | 0.444724 | 5.3:-8283274 | MS.gene43531:CDS |
| GATTTCATGGAGGCTTGGGC+TGG | 0.447837 | 5.3:-8283610 | MS.gene43531:CDS |
| AAGCCCAGATTATGAAGAAT+GGG | 0.454167 | 5.3:-8283575 | MS.gene43531:CDS |
| ATTCTACGATGATCCTGAAA+TGG | 0.454311 | 5.3:-8284121 | MS.gene43531:CDS |
| GGTGGATCAAAGCGCAGATC+GGG | 0.455974 | 5.3:+8284153 | None:intergenic |
| ACTGCTGATGCTTGTTGGAA+TGG | 0.456658 | 5.3:-8283178 | MS.gene43531:CDS |
| TTTCTCGATCGCGATCAGAT+AGG | 0.459063 | 5.3:+8283486 | None:intergenic |
| CCTGTAAAATGTGTAACAAA+TGG | 0.462913 | 5.3:+8283238 | None:intergenic |
| CTGCTGATGCTTGTTGGAAT+GGG | 0.463785 | 5.3:-8283177 | MS.gene43531:CDS |
| CATCATCCGTCTTTCTCTGC+AGG | 0.478033 | 5.3:-8284039 | MS.gene43531:CDS |
| TCTCCGTGCAAGAATCCAAT+AGG | 0.480437 | 5.3:-8283976 | MS.gene43531:CDS |
| GCCTGTCTGATCGTCTGACT+CGG | 0.492017 | 5.3:+8283513 | None:intergenic |
| AAGAATGGGGTAAGATTCTC+CGG | 0.493384 | 5.3:-8283561 | MS.gene43531:CDS |
| GAAAGAGTGTTGATGGTCAC+TGG | 0.495025 | 5.3:-8284009 | MS.gene43531:CDS |
| TCATTATACTTCCCACTACA+AGG | 0.496339 | 5.3:+8283208 | None:intergenic |
| GCATGACGCCTTCTTAACTT+AGG | 0.496571 | 5.3:+8283343 | None:intergenic |
| CTCACTTGATCCATGAGAAA+CGG | 0.497365 | 5.3:-8283690 | MS.gene43531:CDS |
| ATTTATCTTTAAAAGTTGAC+CGG | 0.498543 | 5.3:+8283542 | None:intergenic |
| AAAGCCCAGATTATGAAGAA+TGG | 0.499353 | 5.3:-8283576 | MS.gene43531:CDS |
| CAGTCCAGCTCCGTTTCTCA+TGG | 0.499397 | 5.3:+8283680 | None:intergenic |
| ATGAGAAACGGAGCTGGACT+GGG | 0.501194 | 5.3:-8283678 | MS.gene43531:CDS |
| ATTGGATTCTTGCACGGAGA+AGG | 0.509563 | 5.3:+8283979 | None:intergenic |
| GCTTCCTCTCAAACGTTACA+AGG | 0.512911 | 5.3:-8283740 | MS.gene43531:CDS |
| TCGTAGAATGTTTGGTCTGG+TGG | 0.513684 | 5.3:+8284135 | None:intergenic |
| AGATGCATTGTTCACCGACA+TGG | 0.516301 | 5.3:-8283770 | MS.gene43531:CDS |
| GCTGACAAGATTTATCTAGA+AGG | 0.520122 | 5.3:-8283454 | MS.gene43531:CDS |
| CCCGAGTCAGACGATCAGAC+AGG | 0.525329 | 5.3:-8283514 | MS.gene43531:CDS |
| TCATCGTAGAATGTTTGGTC+TGG | 0.529616 | 5.3:+8284132 | None:intergenic |
| TGACCACCAAAATAGACGAC+TGG | 0.534163 | 5.3:-8284089 | MS.gene43531:CDS |
| GGGTATTGGGAAGAGATAGT+AGG | 0.535734 | 5.3:-8283415 | MS.gene43531:CDS |
| GTCTTTCTCTGCAGGAGCAA+AGG | 0.536163 | 5.3:-8284031 | MS.gene43531:CDS |
| AAAATGCTCCTCCAAGGAAG+AGG | 0.536323 | 5.3:+8284280 | None:intergenic |
| TGATCCATGAGAAACGGAGC+TGG | 0.538704 | 5.3:-8283684 | MS.gene43531:CDS |
| GTTTGGGATGGGGTTTGTGA+AGG | 0.539018 | 5.3:+8284227 | None:intergenic |
| TTTGCTCCTGCAGAGAAAGA+CGG | 0.551182 | 5.3:+8284033 | None:intergenic |
| TGTTGTGAAAGCTGCAATGA+TGG | 0.556012 | 5.3:-8283830 | MS.gene43531:CDS |
| TGGTGGATCAAAGCGCAGAT+CGG | 0.556690 | 5.3:+8284152 | None:intergenic |
| ACAGGTTGTCAACCTTGTAG+TGG | 0.558357 | 5.3:-8283220 | MS.gene43531:CDS |
| AAGTTGAGCCTAAGTTAAGA+AGG | 0.567104 | 5.3:-8283351 | MS.gene43531:CDS |
| CCTGTCTGATCGTCTGACTC+GGG | 0.569637 | 5.3:+8283514 | None:intergenic |
| CAGGTTGTCAACCTTGTAGT+GGG | 0.588604 | 5.3:-8283219 | MS.gene43531:CDS |
| GAGCTGAAAATGCTCCTCCA+AGG | 0.589197 | 5.3:+8284274 | None:intergenic |
| GAAGGCGAATATTACTTCGA+GGG | 0.591672 | 5.3:-8283436 | MS.gene43531:CDS |
| AGAAGGCGAATATTACTTCG+AGG | 0.599202 | 5.3:-8283437 | MS.gene43531:CDS |
| TGATCCTTGTAACGTTTGAG+AGG | 0.599914 | 5.3:+8283736 | None:intergenic |
| TCACCTATTGGATTCTTGCA+CGG | 0.608907 | 5.3:+8283973 | None:intergenic |
| GACCACCAAAATAGACGACT+GGG | 0.610284 | 5.3:-8284088 | MS.gene43531:CDS |
| CAGAAGCAGAGTGGATCTGG+TGG | 0.614112 | 5.3:-8283801 | MS.gene43531:CDS |
| AGCTGGACTGGGTTAAACGC+TGG | 0.635344 | 5.3:-8283667 | MS.gene43531:CDS |
| TCATTGCAGCTTTCACAACA+GGG | 0.636937 | 5.3:+8283833 | None:intergenic |
| CGTTTCTCATGGATCAAGTG+AGG | 0.643998 | 5.3:+8283691 | None:intergenic |
| AAGGCGAATATTACTTCGAG+GGG | 0.647787 | 5.3:-8283435 | MS.gene43531:CDS |
| AGGAAGCTTGAAATCCATGT+CGG | 0.666037 | 5.3:+8283756 | None:intergenic |
| GGGATGAAAAGCGTGAGGAG+TGG | 0.666595 | 5.3:-8284068 | MS.gene43531:CDS |
| AGAAGCAGAGTGGATCTGGT+GGG | 0.667841 | 5.3:-8283800 | MS.gene43531:CDS |
| AGCCCAGATTATGAAGAATG+GGG | 0.678392 | 5.3:-8283574 | MS.gene43531:CDS |
| CGACTGGGATGAAAAGCGTG+AGG | 0.682004 | 5.3:-8284073 | MS.gene43531:CDS |
| GAGGCCAGCCATGAACAACA+AGG | 0.700083 | 5.3:+8283710 | None:intergenic |
| TGGCACATCCAGAAGCAGAG+TGG | 0.700260 | 5.3:-8283810 | MS.gene43531:CDS |
| GAGAAAGTGAGTGAAGCTCA+TGG | 0.705834 | 5.3:-8283319 | MS.gene43531:CDS |
| ATGGTCATTAGATTTCATGG+AGG | 0.731958 | 5.3:-8283620 | MS.gene43531:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTTAAAAATAATAAGTTAT+TGG | + | chr5.3:8283085-8283104 | None:intergenic | 10.0% |
| !!! | ATAATGTTGAAATTATATTT+TGG | - | chr5.3:8283696-8283715 | MS.gene43531:CDS | 10.0% |
| !!! | ATTAAATATACCATTTTTTT+TGG | + | chr5.3:8282925-8282944 | None:intergenic | 10.0% |
| !!! | CTTTTAATCATATTTTAATA+GGG | - | chr5.3:8282277-8282296 | MS.gene43531:intron | 10.0% |
| !!! | TCTTTTAATCATATTTTAAT+AGG | - | chr5.3:8282276-8282295 | MS.gene43531:intron | 10.0% |
| !!! | TTTAATTTTACCAAAAAAAA+TGG | - | chr5.3:8282912-8282931 | MS.gene43531:intron | 10.0% |
| !!! | TTTTAATCATATTTTAATAG+GGG | - | chr5.3:8282278-8282297 | MS.gene43531:intron | 10.0% |
| !! | CTATAATAATTTGAGTATAA+TGG | + | chr5.3:8284254-8284273 | None:intergenic | 15.0% |
| !! | TAAATATTAGATTATGGATT+TGG | - | chr5.3:8282450-8282469 | MS.gene43531:intron | 15.0% |
| !! | TACAAATCTTCTTTATTATA+AGG | + | chr5.3:8283802-8283821 | None:intergenic | 15.0% |
| !! | TATTATAAGGAAAAAAAGTT+AGG | + | chr5.3:8283789-8283808 | None:intergenic | 15.0% |
| !! | TTGGTATAAATATTAGATTA+TGG | - | chr5.3:8282444-8282463 | MS.gene43531:intron | 15.0% |
| !!! | GCTTTTGTATAATATTTTAA+GGG | - | chr5.3:8282392-8282411 | MS.gene43531:intron | 15.0% |
| !!! | GTAGTATTTTGTAAAATTAA+TGG | - | chr5.3:8282849-8282868 | MS.gene43531:intron | 15.0% |
| !!! | TGCTTTTGTATAATATTTTA+AGG | - | chr5.3:8282391-8282410 | MS.gene43531:intron | 15.0% |
| !! | AAAATGATTCAAAATATTGG+TGG | + | chr5.3:8283893-8283912 | None:intergenic | 20.0% |
| !! | AAATGATTCAAAATATTGGT+GGG | + | chr5.3:8283892-8283911 | None:intergenic | 20.0% |
| !! | AAGATTCTTCAAAAATAAAG+TGG | - | chr5.3:8281325-8281344 | MS.gene43531:intron | 20.0% |
| !! | AATATTAAATCTGTGATGTT+AGG | + | chr5.3:8283566-8283585 | None:intergenic | 20.0% |
| !! | AATCAAGTTATTCGTAAATT+TGG | - | chr5.3:8282136-8282155 | MS.gene43531:intron | 20.0% |
| !! | ACCCAAAATATAATATTGAT+GGG | + | chr5.3:8283854-8283873 | None:intergenic | 20.0% |
| !! | ATAACTAAAATAGACATGTT+TGG | - | chr5.3:8283344-8283363 | MS.gene43531:CDS | 20.0% |
| !! | ATGCTAACTTATTATGATTT+GGG | + | chr5.3:8283109-8283128 | None:intergenic | 20.0% |
| !! | ATTAAAAGATTATACCTGAA+GGG | + | chr5.3:8282265-8282284 | None:intergenic | 20.0% |
| !! | CAATACTTAAACTAATTCAT+TGG | - | chr5.3:8283729-8283748 | MS.gene43531:CDS | 20.0% |
| !! | GCTAAAATGATTCAAAATAT+TGG | + | chr5.3:8283896-8283915 | None:intergenic | 20.0% |
| !! | TAATAATTTGAGTATAATGG+TGG | + | chr5.3:8284251-8284270 | None:intergenic | 20.0% |
| !! | TACCCAAAATATAATATTGA+TGG | + | chr5.3:8283855-8283874 | None:intergenic | 20.0% |
| !! | TATGCTAACTTATTATGATT+TGG | + | chr5.3:8283110-8283129 | None:intergenic | 20.0% |
| !!! | ATATTTTAAGGGATCTTTTT+TGG | - | chr5.3:8282403-8282422 | MS.gene43531:intron | 20.0% |
| !!! | ATTTATCTTTAAAAGTTGAC+CGG | + | chr5.3:8281724-8281743 | None:intergenic | 20.0% |
| !!! | TCAAATAATCTAAGACAATA+AGG | + | chr5.3:8284209-8284228 | None:intergenic | 20.0% |
| !!! | TCCCATCAATATTATATTTT+GGG | - | chr5.3:8283850-8283869 | MS.gene43531:CDS | 20.0% |
| !!! | TTATACCTTTTCTCATTTAA+GGG | - | chr5.3:8283274-8283293 | MS.gene43531:CDS | 20.0% |
| ! | GATTAAAAGATTATACCTGA+AGG | + | chr5.3:8282266-8282285 | None:intergenic | 25.0% |
| ! | GTGATGTTAGGTAATATTAA+CGG | + | chr5.3:8283554-8283573 | None:intergenic | 25.0% |
| ! | TAAGCTATAAGCTCAAAAAT+TGG | + | chr5.3:8283315-8283334 | None:intergenic | 25.0% |
| ! | TACTATAGTTTATATGCAAG+TGG | - | chr5.3:8283968-8283987 | MS.gene43531:CDS | 25.0% |
| ! | TGAAATAAAGTAGTATCCAA+AGG | + | chr5.3:8283662-8283681 | None:intergenic | 25.0% |
| ! | TGAAGAATCTTAACAACAAA+TGG | + | chr5.3:8281316-8281335 | None:intergenic | 25.0% |
| ! | TGTCAATATTTGCATAAACT+GGG | - | chr5.3:8282475-8282494 | MS.gene43531:intron | 25.0% |
| ! | TTGTCAATATTTGCATAAAC+TGG | - | chr5.3:8282474-8282493 | MS.gene43531:intron | 25.0% |
| !! | AGCACAATTTTTCATCAAAA+TGG | + | chr5.3:8283133-8283152 | None:intergenic | 25.0% |
| !! | ATAGAAGAAGATTTGTTTCT+GGG | + | chr5.3:8280945-8280964 | None:intergenic | 25.0% |
| !! | CTTATACCTTTTCTCATTTA+AGG | - | chr5.3:8283273-8283292 | MS.gene43531:CDS | 25.0% |
| !! | GTCCCATCAATATTATATTT+TGG | - | chr5.3:8283849-8283868 | MS.gene43531:CDS | 25.0% |
| !! | TATAGAAGAAGATTTGTTTC+TGG | + | chr5.3:8280946-8280965 | None:intergenic | 25.0% |
| ATCCTAAGATGTTTGCTTAT+TGG | - | chr5.3:8281399-8281418 | MS.gene43531:intron | 30.0% | |
| ATGAAGCATAATCATTCTTG+AGG | + | chr5.3:8282217-8282236 | None:intergenic | 30.0% | |
| CAATAGTCCAAAAACAAAAC+AGG | + | chr5.3:8282629-8282648 | None:intergenic | 30.0% | |
| CATTCTTGAGGATAATCAAA+AGG | + | chr5.3:8282205-8282224 | None:intergenic | 30.0% | |
| CCTGTAAAATGTGTAACAAA+TGG | + | chr5.3:8282028-8282047 | None:intergenic | 30.0% | |
| CGAAAGCTTTACCATAAAAA+AGG | - | chr5.3:8283915-8283934 | MS.gene43531:CDS | 30.0% | |
| CTACAATGTTAGCAAAACTA+TGG | - | chr5.3:8284035-8284054 | MS.gene43531:CDS | 30.0% | |
| GTCAATATTTGCATAAACTG+GGG | - | chr5.3:8282476-8282495 | MS.gene43531:intron | 30.0% | |
| TACAGAATCTTACTAGACAT+TGG | + | chr5.3:8282321-8282340 | None:intergenic | 30.0% | |
| TCAATGGTCATTAGATTTCA+TGG | - | chr5.3:8281640-8281659 | MS.gene43531:intron | 30.0% | |
| TCCTAAGATGTTTGCTTATT+GGG | - | chr5.3:8281400-8281419 | MS.gene43531:intron | 30.0% | |
| TCTAGTAAGATTCTGTATGA+TGG | - | chr5.3:8282324-8282343 | MS.gene43531:intron | 30.0% | |
| TCTTCTATATTTCTCTCTGA+TGG | - | chr5.3:8280957-8280976 | MS.gene43531:intron | 30.0% | |
| TTAGTTATCCATTACAAGCT+AGG | + | chr5.3:8282791-8282810 | None:intergenic | 30.0% | |
| TTGACAGTATACATCCAAAA+CGG | + | chr5.3:8282763-8282782 | None:intergenic | 30.0% | |
| TTGATCAAATGAGACATGTT+TGG | - | chr5.3:8283188-8283207 | MS.gene43531:CDS | 30.0% | |
| TTTAATAGGGGTCCAATTAT+TGG | - | chr5.3:8282290-8282309 | MS.gene43531:intron | 30.0% | |
| ! | ACACTTCAAAGTTTTACTCA+TGG | + | chr5.3:8283611-8283630 | None:intergenic | 30.0% |
| ! | CCATTTCTTTTGACAAAAAC+AGG | + | chr5.3:8282578-8282597 | None:intergenic | 30.0% |
| ! | CGTTTCTTTCATTTGTTGAT+CGG | + | chr5.3:8284089-8284108 | None:intergenic | 30.0% |
| ! | GTATTGTTTTCTGACATTGA+TGG | - | chr5.3:8284326-8284345 | MS.gene43531:CDS | 30.0% |
| ! | GTTTTGTGCATAAAGATCTT+GGG | - | chr5.3:8282158-8282177 | MS.gene43531:intron | 30.0% |
| ! | TAGCTTATAGCTTATTGGTT+TGG | - | chr5.3:8283152-8283171 | MS.gene43531:CDS | 30.0% |
| ! | TATTTGAAAGATGCTGGTTA+TGG | - | chr5.3:8281983-8282002 | MS.gene43531:intron | 30.0% |
| ! | TTCAGCTCTTTTACTTGTTT+GGG | - | chr5.3:8281004-8281023 | MS.gene43531:intron | 30.0% |
| ! | TTTCAGCTCTTTTACTTGTT+TGG | - | chr5.3:8281003-8281022 | MS.gene43531:intron | 30.0% |
| ! | TTTTGTGCATAAAGATCTTG+GGG | - | chr5.3:8282159-8282178 | MS.gene43531:intron | 30.0% |
| ! | TTTTTACATCGTCAATCCTT+TGG | - | chr5.3:8283643-8283662 | MS.gene43531:CDS | 30.0% |
| !! | ATGAGTAAAACTTTGAAGTG+TGG | - | chr5.3:8283610-8283629 | MS.gene43531:CDS | 30.0% |
| !! | ATTGGTTTGGCTTATAATCT+TGG | - | chr5.3:8283165-8283184 | MS.gene43531:CDS | 30.0% |
| !! | CCATTTGTTACACATTTTAC+AGG | - | chr5.3:8282025-8282044 | MS.gene43531:intron | 30.0% |
| !!! | CCTGTTTTTGTCAAAAGAAA+TGG | - | chr5.3:8282575-8282594 | MS.gene43531:intron | 30.0% |
| !!! | GTTGTTTTTGTGAGGTTTTA+AGG | + | chr5.3:8281072-8281091 | None:intergenic | 30.0% |
| AAAGCCCAGATTATGAAGAA+TGG | - | chr5.3:8281687-8281706 | MS.gene43531:intron | 35.0% | |
| AACAACAAATGGTCACCTAT+TGG | + | chr5.3:8281305-8281324 | None:intergenic | 35.0% | |
| AAGCCCAGATTATGAAGAAT+GGG | - | chr5.3:8281688-8281707 | MS.gene43531:intron | 35.0% | |
| AAGTTGAGCCTAAGTTAAGA+AGG | - | chr5.3:8281912-8281931 | MS.gene43531:intron | 35.0% | |
| ACAAATTCGTGTGAAAGTGA+AGG | - | chr5.3:8282975-8282994 | MS.gene43531:intron | 35.0% | |
| ACATTGGTCACACCAATAAT+TGG | + | chr5.3:8282305-8282324 | None:intergenic | 35.0% | |
| ATAGGGTAGATTAACTCAAG+TGG | + | chr5.3:8284280-8284299 | None:intergenic | 35.0% | |
| ATGGTCATTAGATTTCATGG+AGG | - | chr5.3:8281643-8281662 | MS.gene43531:intron | 35.0% | |
| ATTAGATTTCATGGAGGCTT+GGG | - | chr5.3:8281649-8281668 | MS.gene43531:intron | 35.0% | |
| ATTCAAAATATTGGTGGGAC+TGG | + | chr5.3:8283887-8283906 | None:intergenic | 35.0% | |
| ATTCTACGATGATCCTGAAA+TGG | - | chr5.3:8281142-8281161 | MS.gene43531:intron | 35.0% | |
| CAAAAACAGGACAAAAAGAC+AGG | + | chr5.3:8282565-8282584 | None:intergenic | 35.0% | |
| CATAAAGATCTTGGGGATAA+TGG | - | chr5.3:8282166-8282185 | MS.gene43531:intron | 35.0% | |
| GCTGACAAGATTTATCTAGA+AGG | - | chr5.3:8281809-8281828 | MS.gene43531:intron | 35.0% | |
| TACCCCATTCTTCATAATCT+GGG | + | chr5.3:8281694-8281713 | None:intergenic | 35.0% | |
| TAGAGCCCTTAAATGAGAAA+AGG | + | chr5.3:8283282-8283301 | None:intergenic | 35.0% | |
| TCATTATACTTCCCACTACA+AGG | + | chr5.3:8282058-8282077 | None:intergenic | 35.0% | |
| TCTCATTTAAGGGCTCTATT+TGG | - | chr5.3:8283284-8283303 | MS.gene43531:CDS | 35.0% | |
| TGAAAGTGAAGGTCACTAAA+TGG | - | chr5.3:8282986-8283005 | MS.gene43531:intron | 35.0% | |
| TTACCCCATTCTTCATAATC+TGG | + | chr5.3:8281695-8281714 | None:intergenic | 35.0% | |
| TTCAAAATATTGGTGGGACT+GGG | + | chr5.3:8283886-8283905 | None:intergenic | 35.0% | |
| ! | AAAGATGCTGGTTATGGTAA+AGG | - | chr5.3:8281989-8282008 | MS.gene43531:intron | 35.0% |
| ! | AATATTACTTCGAGGGGTAT+TGG | - | chr5.3:8281834-8281853 | MS.gene43531:intron | 35.0% |
| ! | GTTTTACTCATGGTTTGAAC+TGG | + | chr5.3:8283601-8283620 | None:intergenic | 35.0% |
| ! | TCAGCTCTTTTACTTGTTTG+GGG | - | chr5.3:8281005-8281024 | MS.gene43531:intron | 35.0% |
| ! | TGTGCTAGCTTATAGCTTAT+TGG | - | chr5.3:8283147-8283166 | MS.gene43531:CDS | 35.0% |
| ! | TTTTGATCAGGAACTGTCAA+TGG | - | chr5.3:8281624-8281643 | MS.gene43531:intron | 35.0% |
| !! | AGAAGATTTGTTTCTGGGAA+TGG | + | chr5.3:8280940-8280959 | None:intergenic | 35.0% |
| !! | ATATTACTTCGAGGGGTATT+GGG | - | chr5.3:8281835-8281854 | MS.gene43531:intron | 35.0% |
| !! | GAAGAGTATTTGAAAGATGC+TGG | - | chr5.3:8281977-8281996 | MS.gene43531:intron | 35.0% |
| !! | GAAGATTTGTTTCTGGGAAT+GGG | + | chr5.3:8280939-8280958 | None:intergenic | 35.0% |
| !! | GATCATAACCTTGTTGTTCA+TGG | - | chr5.3:8281545-8281564 | MS.gene43531:intron | 35.0% |
| !! | GGTTTTGTGCATAAAGATCT+TGG | - | chr5.3:8282157-8282176 | MS.gene43531:intron | 35.0% |
| !! | GTTGGTTTGTCTCTTATTCT+TGG | - | chr5.3:8282534-8282553 | MS.gene43531:intron | 35.0% |
| !! | GTTTTGGATGTATACTGTCA+AGG | - | chr5.3:8282762-8282781 | MS.gene43531:intron | 35.0% |
| !!! | GAAACAACGTTGTTTTTGTG+AGG | + | chr5.3:8281080-8281099 | None:intergenic | 35.0% |
| !!! | GATCTTTTTTGGCGTATTAG+AGG | - | chr5.3:8282414-8282433 | MS.gene43531:intron | 35.0% |
| !!! | TGCATGCACATCCTTTTTTA+TGG | + | chr5.3:8283929-8283948 | None:intergenic | 35.0% |
| !!! | TTTTGTGAGGTTTTAAGGTG+AGG | + | chr5.3:8281067-8281086 | None:intergenic | 35.0% |
| !!! | TTTTTTGGCGTATTAGAGGT+GGG | - | chr5.3:8282418-8282437 | MS.gene43531:intron | 35.0% |
| AAGAATGGGGTAAGATTCTC+CGG | - | chr5.3:8281702-8281721 | MS.gene43531:intron | 40.0% | |
| AAGGCGAATATTACTTCGAG+GGG | - | chr5.3:8281828-8281847 | MS.gene43531:intron | 40.0% | |
| ACAAACCAACCAACAACGTA+GGG | + | chr5.3:8282524-8282543 | None:intergenic | 40.0% | |
| AGAAGGCGAATATTACTTCG+AGG | - | chr5.3:8281826-8281845 | MS.gene43531:intron | 40.0% | |
| AGCCCAGATTATGAAGAATG+GGG | - | chr5.3:8281689-8281708 | MS.gene43531:intron | 40.0% | |
| AGGAAGCTTGAAATCCATGT+CGG | + | chr5.3:8281510-8281529 | None:intergenic | 40.0% | |
| AGTAATCGTGGGGTATAACA+TGG | + | chr5.3:8282728-8282747 | None:intergenic | 40.0% | |
| ATCATTGCAGCTTTCACAAC+AGG | + | chr5.3:8281434-8281453 | None:intergenic | 40.0% | |
| CAGGATCATCGTAGAATGTT+TGG | + | chr5.3:8281139-8281158 | None:intergenic | 40.0% | |
| CATTAGATTTCATGGAGGCT+TGG | - | chr5.3:8281648-8281667 | MS.gene43531:intron | 40.0% | |
| CGCGATCGAGAAAGAAAAAT+GGG | - | chr5.3:8281787-8281806 | MS.gene43531:intron | 40.0% | |
| CTCACTTGATCCATGAGAAA+CGG | - | chr5.3:8281573-8281592 | MS.gene43531:intron | 40.0% | |
| CTGGTTATGGTAAAGGAAGT+TGG | - | chr5.3:8281996-8282015 | MS.gene43531:intron | 40.0% | |
| GAAGGCGAATATTACTTCGA+GGG | - | chr5.3:8281827-8281846 | MS.gene43531:intron | 40.0% | |
| GCCCAATAAGCAAACATCTT+AGG | + | chr5.3:8281404-8281423 | None:intergenic | 40.0% | |
| GTCATGGTATACTCCATTTC+AGG | + | chr5.3:8281158-8281177 | None:intergenic | 40.0% | |
| GTTTATATGCAAGTGGCCTA+AGG | - | chr5.3:8283975-8283994 | MS.gene43531:CDS | 40.0% | |
| TCACCTATTGGATTCTTGCA+CGG | + | chr5.3:8281293-8281312 | None:intergenic | 40.0% | |
| TCATCGTAGAATGTTTGGTC+TGG | + | chr5.3:8281134-8281153 | None:intergenic | 40.0% | |
| TCATTGCAGCTTTCACAACA+GGG | + | chr5.3:8281433-8281452 | None:intergenic | 40.0% | |
| TCGCGATCGAGAAAGAAAAA+TGG | - | chr5.3:8281786-8281805 | MS.gene43531:intron | 40.0% | |
| TCTTCATAATCTGGGCTTTG+TGG | + | chr5.3:8281686-8281705 | None:intergenic | 40.0% | |
| TGATATGATCATGACCCTTC+AGG | - | chr5.3:8282248-8282267 | MS.gene43531:intron | 40.0% | |
| TGATCCTTGTAACGTTTGAG+AGG | + | chr5.3:8281530-8281549 | None:intergenic | 40.0% | |
| TGTTGTGAAAGCTGCAATGA+TGG | - | chr5.3:8281433-8281452 | MS.gene43531:intron | 40.0% | |
| TTACTCATGGTTTGAACTGG+TGG | + | chr5.3:8283598-8283617 | None:intergenic | 40.0% | |
| ! | CTTCATAATCTGGGCTTTGT+GGG | + | chr5.3:8281685-8281704 | None:intergenic | 40.0% |
| ! | GTGGATTACTCTCGTATTCA+TGG | - | chr5.3:8281344-8281363 | MS.gene43531:intron | 40.0% |
| ! | TTAAGGTGAGGTTGTCGTTT+GGG | + | chr5.3:8281055-8281074 | None:intergenic | 40.0% |
| ! | TTCATCCCAGTCGTCTATTT+TGG | + | chr5.3:8281183-8281202 | None:intergenic | 40.0% |
| ! | TTTAAGGTGAGGTTGTCGTT+TGG | + | chr5.3:8281056-8281075 | None:intergenic | 40.0% |
| !! | AGCAAAGGAAAGAGTGTTGA+TGG | - | chr5.3:8281247-8281266 | MS.gene43531:intron | 40.0% |
| !! | ATAACCTTGTTGTTCATGGC+TGG | - | chr5.3:8281549-8281568 | MS.gene43531:intron | 40.0% |
| !! | TTTTTGGCGTATTAGAGGTG+GGG | - | chr5.3:8282419-8282438 | MS.gene43531:intron | 40.0% |
| !!! | ACATGCGCCTGTTTTGTTTT+TGG | - | chr5.3:8282619-8282638 | MS.gene43531:intron | 40.0% |
| !!! | CTTTTTTGGCGTATTAGAGG+TGG | - | chr5.3:8282417-8282436 | MS.gene43531:intron | 40.0% |
| AAAATGCTCCTCCAAGGAAG+AGG | + | chr5.3:8280986-8281005 | None:intergenic | 45.0% | |
| ACAGGTTGTCAACCTTGTAG+TGG | - | chr5.3:8282043-8282062 | MS.gene43531:intron | 45.0% | |
| AGATGCATTGTTCACCGACA+TGG | - | chr5.3:8281493-8281512 | MS.gene43531:intron | 45.0% | |
| ATTGCAGCACAGTAATCGTG+GGG | + | chr5.3:8282738-8282757 | None:intergenic | 45.0% | |
| ATTGGATTCTTGCACGGAGA+AGG | + | chr5.3:8281287-8281306 | None:intergenic | 45.0% | |
| CAGGTTGTCAACCTTGTAGT+GGG | - | chr5.3:8282044-8282063 | MS.gene43531:intron | 45.0% | |
| CATTGCAGCACAGTAATCGT+GGG | + | chr5.3:8282739-8282758 | None:intergenic | 45.0% | |
| CGTTTCTCATGGATCAAGTG+AGG | + | chr5.3:8281575-8281594 | None:intergenic | 45.0% | |
| GACAAACCAACCAACAACGT+AGG | + | chr5.3:8282525-8282544 | None:intergenic | 45.0% | |
| GACCACCAAAATAGACGACT+GGG | - | chr5.3:8281175-8281194 | MS.gene43531:intron | 45.0% | |
| GAGAAAGTGAGTGAAGCTCA+TGG | - | chr5.3:8281944-8281963 | MS.gene43531:intron | 45.0% | |
| GAGGAAATAGTTGTCCAGAG+TGG | + | chr5.3:8284148-8284167 | None:intergenic | 45.0% | |
| GCATGACGCCTTCTTAACTT+AGG | + | chr5.3:8281923-8281942 | None:intergenic | 45.0% | |
| GCTTCCTCTCAAACGTTACA+AGG | - | chr5.3:8281523-8281542 | MS.gene43531:intron | 45.0% | |
| TAATGGTGGTTGAGCGACAT+TGG | + | chr5.3:8284237-8284256 | None:intergenic | 45.0% | |
| TATATGCAAGTGGCCTAAGG+TGG | - | chr5.3:8283978-8283997 | MS.gene43531:CDS | 45.0% | |
| TCATTGCAGCACAGTAATCG+TGG | + | chr5.3:8282740-8282759 | None:intergenic | 45.0% | |
| TCGTAGAATGTTTGGTCTGG+TGG | + | chr5.3:8281131-8281150 | None:intergenic | 45.0% | |
| TCTCCGTGCAAGAATCCAAT+AGG | - | chr5.3:8281287-8281306 | MS.gene43531:intron | 45.0% | |
| TGACCACCAAAATAGACGAC+TGG | - | chr5.3:8281174-8281193 | MS.gene43531:intron | 45.0% | |
| TGTACACTGCTGATGCTTGT+TGG | - | chr5.3:8282080-8282099 | MS.gene43531:intron | 45.0% | |
| TTCCTCATTACTCTCCACTC+TGG | - | chr5.3:8284131-8284150 | MS.gene43531:CDS | 45.0% | |
| TTTCTCGATCGCGATCAGAT+AGG | + | chr5.3:8281780-8281799 | None:intergenic | 45.0% | |
| TTTGCTCCTGCAGAGAAAGA+CGG | + | chr5.3:8281233-8281252 | None:intergenic | 45.0% | |
| ! | ACTGCTGATGCTTGTTGGAA+TGG | - | chr5.3:8282085-8282104 | MS.gene43531:intron | 45.0% |
| ! | CAAGGTAGCCTAGCTTGTAA+TGG | - | chr5.3:8282780-8282799 | MS.gene43531:intron | 45.0% |
| ! | CTGCTGATGCTTGTTGGAAT+GGG | - | chr5.3:8282086-8282105 | MS.gene43531:intron | 45.0% |
| ! | GTTCATTGAGTTGTCCAGAG+TGG | + | chr5.3:8284179-8284198 | None:intergenic | 45.0% |
| !! | ACGCTGGTGTGTTTTTGATC+AGG | - | chr5.3:8281612-8281631 | MS.gene43531:intron | 45.0% |
| !! | ATCCCAGTCGTCTATTTTGG+TGG | + | chr5.3:8281180-8281199 | None:intergenic | 45.0% |
| !! | GAAAGAGTGTTGATGGTCAC+TGG | - | chr5.3:8281254-8281273 | MS.gene43531:intron | 45.0% |
| !! | GGGTATTGGGAAGAGATAGT+AGG | - | chr5.3:8281848-8281867 | MS.gene43531:intron | 45.0% |
| !!! | GTCGTCTATTTTGGTGGTCA+TGG | + | chr5.3:8281174-8281193 | None:intergenic | 45.0% |
| !! | ATAATAAACATTAATAATAT+AGG | + | chr5.3:8284298-8284317 | None:intergenic | 5.0% |
| !! | TAATAAACATTAATAATATA+GGG | + | chr5.3:8284297-8284316 | None:intergenic | 5.0% |
| !!! | ATTTTTCAATTAAAATAATA+AGG | + | chr5.3:8283475-8283494 | None:intergenic | 5.0% |
| ACCAACAACGTAGGGATTCG+AGG | + | chr5.3:8282516-8282535 | None:intergenic | 50.0% | |
| AGAAGCAGAGTGGATCTGGT+GGG | - | chr5.3:8281463-8281482 | MS.gene43531:intron | 50.0% | |
| ATCCAGAAGCAGAGTGGATC+TGG | - | chr5.3:8281459-8281478 | MS.gene43531:intron | 50.0% | |
| ATGAGAAACGGAGCTGGACT+GGG | - | chr5.3:8281585-8281604 | MS.gene43531:intron | 50.0% | |
| CATCATCCGTCTTTCTCTGC+AGG | - | chr5.3:8281224-8281243 | MS.gene43531:intron | 50.0% | |
| CGAATCCCTACGTTGTTGGT+TGG | - | chr5.3:8282516-8282535 | MS.gene43531:intron | 50.0% | |
| GAGCTGAAAATGCTCCTCCA+AGG | + | chr5.3:8280992-8281011 | None:intergenic | 50.0% | |
| GTCCAGAGTGGAGAGTAATG+AGG | + | chr5.3:8284136-8284155 | None:intergenic | 50.0% | |
| GTCTTTCTCTGCAGGAGCAA+AGG | - | chr5.3:8281232-8281251 | MS.gene43531:intron | 50.0% | |
| TCCTCGAATCCCTACGTTGT+TGG | - | chr5.3:8282512-8282531 | MS.gene43531:intron | 50.0% | |
| TCTGATGGCTTCCTCTTCCT+TGG | - | chr5.3:8280972-8280991 | MS.gene43531:intron | 50.0% | |
| TGATCCATGAGAAACGGAGC+TGG | - | chr5.3:8281579-8281598 | MS.gene43531:intron | 50.0% | |
| ! | CTGTGCTGCAATGACCGTTT+TGG | - | chr5.3:8282746-8282765 | MS.gene43531:intron | 50.0% |
| ! | GCGTATTAGAGGTGGGGTTT+TGG | - | chr5.3:8282425-8282444 | MS.gene43531:intron | 50.0% |
| ! | GTGAGGTTGTCGTTTGGGAT+GGG | + | chr5.3:8281050-8281069 | None:intergenic | 50.0% |
| ! | GTTTGGGATGGGGTTTGTGA+AGG | + | chr5.3:8281039-8281058 | None:intergenic | 50.0% |
| ! | TGAGGTTGTCGTTTGGGATG+GGG | + | chr5.3:8281049-8281068 | None:intergenic | 50.0% |
| ! | TGGTGGATCAAAGCGCAGAT+CGG | + | chr5.3:8281114-8281133 | None:intergenic | 50.0% |
| AAGTGGCCTAAGGTGGTGTG+TGG | - | chr5.3:8283985-8284004 | MS.gene43531:CDS | 55.0% | |
| ACGTTGCCACACACCACCTT+AGG | + | chr5.3:8283994-8284013 | None:intergenic | 55.0% | |
| AGGTGGTGTGTGGCAACGTA+AGG | - | chr5.3:8283995-8284014 | MS.gene43531:CDS | 55.0% | |
| CACCAGATCCACTCTGCTTC+TGG | + | chr5.3:8281464-8281483 | None:intergenic | 55.0% | |
| CAGAAGCAGAGTGGATCTGG+TGG | - | chr5.3:8281462-8281481 | MS.gene43531:intron | 55.0% | |
| CAGTCCAGCTCCGTTTCTCA+TGG | + | chr5.3:8281586-8281605 | None:intergenic | 55.0% | |
| CATGAGAAACGGAGCTGGAC+TGG | - | chr5.3:8281584-8281603 | MS.gene43531:intron | 55.0% | |
| CCTGTCTGATCGTCTGACTC+GGG | + | chr5.3:8281752-8281771 | None:intergenic | 55.0% | |
| GAGGCCAGCCATGAACAACA+AGG | + | chr5.3:8281556-8281575 | None:intergenic | 55.0% | |
| GATGGCTTCCTCTTCCTTGG+AGG | - | chr5.3:8280975-8280994 | MS.gene43531:intron | 55.0% | |
| GATTTCATGGAGGCTTGGGC+TGG | - | chr5.3:8281653-8281672 | MS.gene43531:intron | 55.0% | |
| GCCTGTCTGATCGTCTGACT+CGG | + | chr5.3:8281753-8281772 | None:intergenic | 55.0% | |
| GGTGGATCAAAGCGCAGATC+GGG | + | chr5.3:8281113-8281132 | None:intergenic | 55.0% | |
| TGGCACATCCAGAAGCAGAG+TGG | - | chr5.3:8281453-8281472 | MS.gene43531:intron | 55.0% | |
| ! | AGCTGGACTGGGTTAAACGC+TGG | - | chr5.3:8281596-8281615 | MS.gene43531:intron | 55.0% |
| ! | ATGGAGGCTTGGGCTGGAAT+GGG | - | chr5.3:8281659-8281678 | MS.gene43531:intron | 55.0% |
| ! | CGACTGGGATGAAAAGCGTG+AGG | - | chr5.3:8281190-8281209 | MS.gene43531:intron | 55.0% |
| ! | GGGATGAAAAGCGTGAGGAG+TGG | - | chr5.3:8281195-8281214 | MS.gene43531:intron | 55.0% |
| ! | GGTGAGGTTGTCGTTTGGGA+TGG | + | chr5.3:8281051-8281070 | None:intergenic | 55.0% |
| CCCGAGTCAGACGATCAGAC+AGG | - | chr5.3:8281749-8281768 | MS.gene43531:intron | 60.0% | |
| ! | CATGGAGGCTTGGGCTGGAA+TGG | - | chr5.3:8281658-8281677 | MS.gene43531:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 8280927 | 8284358 | 8280927 | ID=MS.gene43531 |
| chr5.3 | mRNA | 8280927 | 8284358 | 8280927 | ID=MS.gene43531.t1;Parent=MS.gene43531 |
| chr5.3 | exon | 8283098 | 8284358 | 8283098 | ID=MS.gene43531.t1.exon1;Parent=MS.gene43531.t1 |
| chr5.3 | CDS | 8283098 | 8284358 | 8283098 | ID=cds.MS.gene43531.t1;Parent=MS.gene43531.t1 |
| chr5.3 | exon | 8280927 | 8280958 | 8280927 | ID=MS.gene43531.t1.exon2;Parent=MS.gene43531.t1 |
| chr5.3 | CDS | 8280927 | 8280958 | 8280927 | ID=cds.MS.gene43531.t1;Parent=MS.gene43531.t1 |
| Gene Sequence |
| Protein sequence |
