AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene43627

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43627.t1 MTR_2g017955 92.368 380 29 0 1 380 1 380 0.0 727
MS.gene43627.t1 MTR_2g017925 79.211 380 70 3 1 380 1 371 0.0 603
MS.gene43627.t1 MTR_2g017965 76.640 381 84 2 1 380 1 377 0.0 591
MS.gene43627.t1 MTR_2g017915 75.263 380 69 3 1 380 1 355 0.0 570
MS.gene43627.t1 MTR_2g017875 63.305 357 126 5 6 359 6 360 2.18e-148 424
MS.gene43627.t1 MTR_3g023220 59.322 354 137 5 6 359 6 352 9.67e-141 404
MS.gene43627.t1 MTR_8g087870 58.056 360 140 6 1 359 1 350 1.37e-138 399
MS.gene43627.t1 MTR_2g017925 75.097 257 55 3 124 380 21 268 3.11e-134 384
MS.gene43627.t1 MTR_8g087890 48.870 354 170 6 14 359 12 362 7.63e-109 323
MS.gene43627.t1 MTR_0565s0010 45.810 358 176 6 14 359 13 364 8.91e-105 313
MS.gene43627.t1 MTR_3g024510 45.902 366 186 8 3 359 7 369 3.31e-104 312
MS.gene43627.t1 MTR_3g005660 42.936 361 192 7 8 358 12 368 1.82e-91 279
MS.gene43627.t1 MTR_3g005650 42.740 365 190 11 4 359 2 356 2.96e-87 268
MS.gene43627.t1 MTR_2g018015 61.207 232 86 2 1 228 1 232 4.77e-86 263
MS.gene43627.t1 MTR_3g098270 41.279 344 180 11 33 361 34 370 1.80e-77 244
MS.gene43627.t1 MTR_2g017895 48.929 280 123 4 81 359 6 266 2.14e-77 240
MS.gene43627.t1 MTR_4g035353 37.297 370 206 11 5 359 4 362 4.31e-68 219
MS.gene43627.t1 MTR_7g116570 36.657 341 201 8 11 338 8 346 3.72e-63 206
MS.gene43627.t1 MTR_5g078210 38.994 318 179 10 35 342 27 339 8.47e-60 197
MS.gene43627.t1 MTR_2g033930 35.734 361 214 11 9 359 10 362 2.03e-59 196
MS.gene43627.t1 MTR_7g116520 31.081 370 237 9 4 362 6 368 1.43e-58 194
MS.gene43627.t1 MTR_4g122200 35.150 367 218 12 7 360 9 368 5.45e-56 188
MS.gene43627.t1 MTR_1g079530 32.500 360 232 7 8 362 4 357 7.52e-55 184
MS.gene43627.t1 MTR_2g033920 37.879 330 189 11 30 347 32 357 7.90e-55 185
MS.gene43627.t1 MTR_1g079540 31.765 340 219 8 33 363 31 366 1.65e-54 184
MS.gene43627.t1 MTR_2g084585 36.337 344 200 10 5 336 4 340 2.72e-54 183
MS.gene43627.t1 MTR_7g116500 33.333 342 206 9 15 338 8 345 1.04e-53 182
MS.gene43627.t1 MTR_8g079050 34.670 349 201 12 9 336 12 354 1.55e-52 179
MS.gene43627.t1 MTR_3g021460 34.615 364 213 11 4 359 3 349 1.72e-52 178
MS.gene43627.t1 MTR_2g461580 34.054 370 211 12 4 361 3 351 4.65e-52 177
MS.gene43627.t1 MTR_1g024890 30.409 342 221 7 33 363 32 367 2.29e-51 176
MS.gene43627.t1 MTR_1g069175 30.027 373 246 8 1 362 1 369 4.17e-51 175
MS.gene43627.t1 MTR_4g056280 35.294 340 197 9 10 334 7 338 5.32e-51 174
MS.gene43627.t1 MTR_6g021530 31.250 368 226 9 5 353 4 363 4.51e-50 172
MS.gene43627.t1 MTR_7g116510 31.214 346 220 9 29 362 21 360 4.96e-50 172
MS.gene43627.t1 MTR_3g435540 37.209 344 193 13 5 336 1 333 6.29e-50 172
MS.gene43627.t1 MTR_4g108690 38.050 318 172 12 35 336 29 337 2.12e-49 171
MS.gene43627.t1 MTR_1g025720 31.755 359 223 11 1 343 1 353 6.49e-49 169
MS.gene43627.t1 MTR_5g009100 32.153 339 214 10 35 362 48 381 2.06e-48 168
MS.gene43627.t1 MTR_1g025760 32.267 344 206 11 9 331 48 385 9.47e-48 167
MS.gene43627.t1 MTR_5g084750 32.764 351 202 12 4 336 6 340 1.57e-47 165
MS.gene43627.t1 MTR_4g019880 31.176 340 221 7 33 362 32 368 2.66e-47 165
MS.gene43627.t1 MTR_1g025700 32.749 342 211 11 3 330 17 353 1.16e-46 163
MS.gene43627.t1 MTR_7g008060 31.861 317 188 7 27 332 27 326 1.27e-46 163
MS.gene43627.t1 MTR_5g093090 30.645 372 226 12 5 358 3 360 1.95e-46 162
MS.gene43627.t1 MTR_3g052580 30.548 383 237 13 1 368 1 369 2.05e-46 163
MS.gene43627.t1 MTR_5g084790 34.503 342 196 12 11 336 13 342 2.83e-46 162
MS.gene43627.t1 MTR_3g082830 34.161 322 191 10 29 336 34 348 4.36e-46 162
MS.gene43627.t1 MTR_5g022640 34.891 321 190 11 31 337 41 356 4.45e-46 162
MS.gene43627.t1 MTR_3g464730 33.333 351 207 12 1 336 1 339 5.20e-46 161
MS.gene43627.t1 MTR_5g022630 36.441 354 200 16 2 337 11 357 7.45e-46 161
MS.gene43627.t1 MTR_4g056160 35.882 340 183 14 13 332 12 336 2.00e-45 159
MS.gene43627.t1 MTR_1g025780 31.805 349 211 11 1 329 1 342 2.31e-45 160
MS.gene43627.t1 MTR_3g052580 30.790 367 225 13 7 358 6 358 4.50e-44 157
MS.gene43627.t1 MTR_1g025680 36.076 316 177 12 31 330 32 338 1.93e-43 157
MS.gene43627.t1 MTR_3g052480 32.665 349 203 13 30 358 30 366 3.89e-43 154
MS.gene43627.t1 MTR_5g078210 39.516 248 141 8 35 278 27 269 9.14e-43 152
MS.gene43627.t1 MTR_2g033920 40.851 235 132 6 30 260 32 263 3.27e-42 150
MS.gene43627.t1 MTR_8g075230 33.235 340 209 12 11 337 14 348 3.48e-42 151
MS.gene43627.t1 MTR_3g052490 31.937 382 218 18 1 358 1 364 1.51e-41 150
MS.gene43627.t1 MTR_2g044100 33.333 351 193 14 8 329 10 348 1.52e-41 150
MS.gene43627.t1 MTR_8g014910 34.195 348 201 14 6 336 7 343 2.32e-41 149
MS.gene43627.t1 MTR_0009s0250 30.864 324 194 10 30 340 30 336 2.43e-41 149
MS.gene43627.t1 MTR_3g114090 32.692 312 191 11 32 330 35 340 3.52e-41 149
MS.gene43627.t1 MTR_3g114120 33.441 311 191 9 31 330 45 350 4.74e-41 148
MS.gene43627.t1 MTR_2g100620 33.025 324 189 10 31 336 29 342 9.44e-41 147
MS.gene43627.t1 MTR_5g084770 30.484 351 217 10 1 336 1 339 1.12e-40 147
MS.gene43627.t1 MTR_8g074570 31.476 359 209 13 9 347 20 361 3.01e-40 146
MS.gene43627.t1 MTR_5g074270 31.250 320 199 10 28 332 28 341 5.90e-39 143
MS.gene43627.t1 MTR_8g075220 29.885 348 219 12 3 329 5 348 7.03e-39 142
MS.gene43627.t1 MTR_8g022790 33.333 351 209 13 19 359 25 360 8.23e-39 142
MS.gene43627.t1 MTR_8g075200 30.435 345 216 12 3 329 6 344 9.54e-39 143
MS.gene43627.t1 MTR_0127s0040 34.855 241 146 6 126 359 1 237 1.37e-38 138
MS.gene43627.t1 MTR_8g074560 30.058 346 215 13 4 329 1 339 1.98e-38 141
MS.gene43627.t1 MTR_8g031390 31.624 351 203 12 9 336 6 342 4.57e-38 140
MS.gene43627.t1 MTR_8g031420 32.164 342 203 12 34 360 36 363 1.34e-37 139
MS.gene43627.t1 MTR_2g017945 68.478 92 29 0 289 380 88 179 6.84e-37 132
MS.gene43627.t1 MTR_1g025910 32.448 339 203 12 38 357 41 372 1.15e-36 137
MS.gene43627.t1 MTR_8g022810 31.548 336 204 12 14 330 18 346 1.71e-36 136
MS.gene43627.t1 MTR_4g087985 28.035 346 225 10 13 338 16 357 1.97e-35 133
MS.gene43627.t1 MTR_8g031430 30.914 372 217 14 13 360 10 365 5.79e-35 132
MS.gene43627.t1 MTR_5g093090 32.721 272 163 8 5 266 3 264 1.26e-34 130
MS.gene43627.t1 MTR_5g083040 29.560 318 202 8 29 329 28 340 2.97e-34 130
MS.gene43627.t1 MTR_2g015080 27.714 350 224 12 1 329 9 350 3.98e-33 127
MS.gene43627.t1 MTR_8g031400 29.067 375 220 13 13 360 10 365 1.66e-32 125
MS.gene43627.t1 MTR_8g031390 31.833 311 171 12 9 298 6 296 6.40e-32 123
MS.gene43627.t1 MTR_8g022810 34.685 222 133 7 14 229 18 233 7.54e-29 114
MS.gene43627.t1 MTR_8g074580 27.027 407 232 14 9 358 19 417 1.48e-27 112
MS.gene43627.t1 MTR_1g079590 35.260 173 109 3 33 203 31 202 2.68e-27 107
MS.gene43627.t1 MTR_1g030340 26.197 355 218 9 13 332 19 364 1.99e-24 103
MS.gene43627.t1 MTR_5g093090 33.333 213 124 7 5 207 3 207 3.68e-24 99.4
MS.gene43627.t1 MTR_7g033150 27.151 372 211 13 13 338 10 367 1.09e-22 98.6
MS.gene43627.t1 MTR_1g030268 27.027 333 205 10 32 335 39 362 2.51e-22 97.8
MS.gene43627.t1 MTR_4g036375 32.370 173 112 4 10 179 7 177 3.48e-22 93.6
MS.gene43627.t1 MTR_6g049220 46.226 106 53 3 21 122 18 123 1.59e-21 90.9
MS.gene43627.t1 MTR_6g007095 27.164 335 201 12 32 336 40 361 1.65e-21 96.7
MS.gene43627.t1 MTR_6g007095 27.517 298 181 12 60 336 394 677 9.60e-18 85.5
MS.gene43627.t1 MTR_1g060500 28.086 324 191 11 34 334 41 345 1.65e-21 95.1
MS.gene43627.t1 MTR_7g116870 25.464 377 228 14 13 350 9 371 8.97e-21 93.2
MS.gene43627.t1 MTR_8g089805 24.176 364 230 12 5 332 11 364 1.10e-20 93.2
MS.gene43627.t1 MTR_6g007090 27.642 369 221 17 1 336 4 359 1.67e-20 92.4
MS.gene43627.t1 MTR_7g033155 26.329 395 223 13 1 341 4 384 2.36e-20 92.0
MS.gene43627.t1 MTR_1g060490 27.760 317 193 13 34 334 38 334 5.82e-20 90.5
MS.gene43627.t1 MTR_1g030275 26.254 339 200 11 32 335 38 361 8.37e-20 90.5
MS.gene43627.t1 MTR_7g087190 26.027 365 224 12 5 332 13 368 1.43e-19 89.7
MS.gene43627.t1 MTR_1g030230 26.975 367 225 12 1 335 1 356 1.46e-19 89.7
MS.gene43627.t1 MTR_5g087690 27.019 359 223 13 25 362 40 380 1.88e-19 89.4
MS.gene43627.t1 MTR_2g015630 28.412 359 209 16 6 330 5 349 3.34e-19 88.6
MS.gene43627.t1 MTR_6g007100 26.543 324 206 12 32 336 32 342 4.69e-19 87.8
MS.gene43627.t1 MTR_1g030220 25.956 366 215 13 3 330 12 359 1.29e-18 87.0
MS.gene43627.t1 MTR_1g092690 26.266 316 192 15 34 331 52 344 1.53e-18 86.7
MS.gene43627.t1 MTR_2g015590 25.549 364 213 12 3 330 7 348 1.55e-18 86.7
MS.gene43627.t1 MTR_1g030268 28.033 239 150 7 32 257 39 268 4.41e-18 84.7
MS.gene43627.t1 MTR_1g092750 27.439 328 181 14 34 334 41 338 6.42e-18 84.3
MS.gene43627.t1 MTR_3g463960 27.052 329 196 14 34 330 45 361 3.92e-17 82.4
MS.gene43627.t1 MTR_3g463950 27.052 329 196 14 34 330 45 361 3.92e-17 82.4
MS.gene43627.t1 MTR_3g463970 27.052 329 196 14 34 330 45 361 3.92e-17 82.4
MS.gene43627.t1 MTR_3g463940 27.052 329 196 14 34 330 45 361 3.92e-17 82.4
MS.gene43627.t1 MTR_2g015590 28.405 257 157 8 3 249 7 246 4.78e-17 82.0
MS.gene43627.t1 MTR_1g092760 24.768 323 195 14 34 334 40 336 2.23e-16 80.1
MS.gene43627.t1 MTR_1g092740 24.611 321 198 15 34 334 39 335 2.34e-16 80.1
MS.gene43627.t1 MTR_2g087292 39.831 118 60 4 3 116 9 119 2.47e-16 79.0
MS.gene43627.t1 MTR_7g104220 25.000 324 206 12 28 334 37 340 5.15e-16 79.0
MS.gene43627.t1 MTR_4g104240 24.620 329 198 12 34 330 40 350 1.23e-15 78.2
MS.gene43627.t1 MTR_2g015580 25.994 327 201 13 34 330 48 363 1.32e-15 78.2
MS.gene43627.t1 MTR_3g463930 27.327 333 197 15 34 330 45 368 1.51e-15 77.8
MS.gene43627.t1 MTR_8g028160 23.295 352 206 14 34 341 37 368 3.49e-15 76.6
MS.gene43627.t1 MTR_7g113860 24.340 341 209 11 32 336 28 355 7.12e-15 75.9
MS.gene43627.t1 MTR_7g033165 24.928 345 212 13 32 341 32 364 7.30e-15 75.9
MS.gene43627.t1 MTR_2g017935 45.299 117 39 2 176 292 29 120 2.58e-14 69.3
MS.gene43627.t1 MTR_7g113860 22.466 365 232 10 9 336 11 361 4.45e-14 73.6
MS.gene43627.t1 MTR_8g012540 25.965 285 186 10 9 277 4 279 6.32e-14 72.8
MS.gene43627.t1 MTR_7g033165 26.506 249 151 9 32 260 32 268 1.20e-13 71.6
MS.gene43627.t1 MTR_3g069780 25.767 326 201 14 34 330 31 344 1.90e-11 65.5
MS.gene43627.t1 MTR_3g438030 25.688 327 200 14 34 330 31 344 3.65e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene43627.t1 AT1G29670 46.721 366 184 6 1 359 1 362 1.73e-112 333
MS.gene43627.t1 AT1G29670 46.721 366 184 6 1 359 69 430 3.90e-111 332
MS.gene43627.t1 AT1G29660 46.612 369 181 8 1 359 1 363 1.02e-110 328
MS.gene43627.t1 AT5G45670 47.647 340 160 6 31 358 27 360 1.96e-103 310
MS.gene43627.t1 AT4G18970 47.801 341 168 5 27 359 22 360 2.77e-103 309
MS.gene43627.t1 AT4G18970 47.801 341 168 5 27 359 22 360 3.76e-102 308
MS.gene43627.t1 AT1G33811 41.444 374 192 9 4 358 3 368 2.13e-94 287
MS.gene43627.t1 AT2G19010 43.820 356 180 7 8 360 10 348 3.37e-92 280
MS.gene43627.t1 AT2G19010 43.539 356 181 6 8 360 40 378 1.57e-91 280
MS.gene43627.t1 AT2G19050 45.541 314 160 5 30 340 28 333 1.48e-84 261
MS.gene43627.t1 AT1G71691 40.882 340 188 7 27 359 49 382 7.52e-84 260
MS.gene43627.t1 AT4G30140 43.030 330 175 4 30 358 30 347 3.96e-79 247
MS.gene43627.t1 AT5G08460 38.978 372 208 11 1 357 15 382 3.07e-77 243
MS.gene43627.t1 AT2G19050 48.790 248 119 2 30 277 28 267 1.01e-74 233
MS.gene43627.t1 AT2G19060 40.922 347 179 8 21 358 19 348 1.83e-74 235
MS.gene43627.t1 AT5G15720 40.169 356 181 12 26 359 18 363 6.02e-73 231
MS.gene43627.t1 AT1G71250 38.547 358 202 10 13 357 18 370 4.73e-69 222
MS.gene43627.t1 AT1G71691 43.825 251 137 4 27 277 49 295 2.22e-67 216
MS.gene43627.t1 AT1G71691 35.664 286 171 7 80 358 1 280 1.95e-57 189
MS.gene43627.t1 AT4G28780 33.724 341 207 11 1 329 1 334 2.28e-56 189
MS.gene43627.t1 AT5G15720 43.346 263 134 8 26 277 18 276 2.41e-56 187
MS.gene43627.t1 AT3G50400 34.037 379 217 14 6 359 3 373 4.21e-56 188
MS.gene43627.t1 AT1G74460 37.647 340 181 14 16 336 6 333 4.46e-53 180
MS.gene43627.t1 AT3G04290 31.117 376 225 9 14 380 14 364 1.62e-52 179
MS.gene43627.t1 AT5G37690 36.538 312 183 11 35 336 29 335 2.49e-52 178
MS.gene43627.t1 AT2G23540 37.309 327 169 13 35 336 50 365 3.63e-52 178
MS.gene43627.t1 AT2G04570 36.070 341 199 11 15 342 10 344 1.71e-51 176
MS.gene43627.t1 AT5G33370 31.232 349 219 9 28 363 25 365 1.75e-49 171
MS.gene43627.t1 AT5G03820 34.985 323 193 10 27 336 27 345 2.48e-48 167
MS.gene43627.t1 AT5G15720 36.491 285 156 9 92 359 56 332 5.05e-48 166
MS.gene43627.t1 AT5G03820 34.985 323 193 10 27 336 55 373 5.46e-48 167
MS.gene43627.t1 AT4G16230 40.000 245 133 8 13 249 10 248 2.46e-47 162
MS.gene43627.t1 AT5G41890 34.857 350 188 12 14 336 17 353 2.62e-47 165
MS.gene43627.t1 AT5G18430 33.433 335 202 10 11 332 10 336 3.17e-47 165
MS.gene43627.t1 AT5G22810 35.244 349 198 12 8 336 7 347 5.22e-47 164
MS.gene43627.t1 AT5G37690 34.615 312 181 12 35 336 29 327 8.14e-47 163
MS.gene43627.t1 AT3G53100 34.954 329 189 10 24 336 20 339 1.86e-46 162
MS.gene43627.t1 AT2G42990 33.535 331 201 11 29 346 24 348 4.50e-46 161
MS.gene43627.t1 AT5G63170 32.219 329 202 9 9 329 4 319 3.60e-45 159
MS.gene43627.t1 AT1G59406 32.551 341 203 10 5 329 1 330 1.00e-44 158
MS.gene43627.t1 AT1G59030 32.551 341 203 10 5 329 1 330 1.00e-44 158
MS.gene43627.t1 AT1G58725 32.551 341 203 10 5 329 1 330 1.00e-44 158
MS.gene43627.t1 AT4G10950 30.294 340 221 10 31 359 69 403 1.81e-44 158
MS.gene43627.t1 AT1G75880 31.694 366 220 13 3 348 19 374 8.04e-44 156
MS.gene43627.t1 AT3G14820 33.934 333 200 11 26 345 25 350 1.11e-43 155
MS.gene43627.t1 AT1G75890 34.251 327 193 13 32 343 46 365 1.51e-43 155
MS.gene43627.t1 AT1G75890 34.251 327 193 13 32 343 75 394 2.01e-43 155
MS.gene43627.t1 AT1G75880 31.608 367 222 13 2 348 18 375 2.04e-43 155
MS.gene43627.t1 AT5G03810 31.921 354 210 12 1 336 1 341 4.73e-43 153
MS.gene43627.t1 AT5G42170 34.295 312 183 10 31 329 48 350 7.71e-43 153
MS.gene43627.t1 AT4G26790 34.688 320 192 10 29 336 25 339 8.29e-43 152
MS.gene43627.t1 AT4G26790 34.688 320 192 10 29 336 25 339 8.29e-43 152
MS.gene43627.t1 AT4G10950 30.294 340 217 11 31 359 69 399 2.12e-42 153
MS.gene43627.t1 AT1G75890 32.840 338 196 12 32 343 46 378 2.12e-41 150
MS.gene43627.t1 AT1G20135 31.804 327 203 10 11 329 6 320 2.83e-41 148
MS.gene43627.t1 AT2G03980 29.851 335 210 7 22 341 32 356 1.19e-40 147
MS.gene43627.t1 AT2G03980 29.851 335 210 7 22 341 32 356 1.19e-40 147
MS.gene43627.t1 AT2G03980 29.851 335 210 7 22 341 32 356 1.19e-40 147
MS.gene43627.t1 AT2G03980 29.851 335 210 7 22 341 32 356 1.19e-40 147
MS.gene43627.t1 AT5G55050 31.595 326 200 9 23 330 28 348 1.02e-39 145
MS.gene43627.t1 AT1G23500 33.028 327 193 11 13 329 16 326 1.05e-39 144
MS.gene43627.t1 AT3G16370 33.229 319 195 11 31 336 28 341 3.35e-39 143
MS.gene43627.t1 AT1G58520 32.298 322 187 11 21 329 20 323 5.31e-39 142
MS.gene43627.t1 AT1G58525 32.298 322 187 11 21 329 20 323 5.31e-39 142
MS.gene43627.t1 AT5G33370 32.374 278 173 6 28 295 25 297 1.35e-38 141
MS.gene43627.t1 AT1G53920 31.065 338 202 12 26 348 41 362 2.80e-38 141
MS.gene43627.t1 AT3G43570 31.307 329 185 12 8 329 7 301 6.73e-38 139
MS.gene43627.t1 AT3G43550 34.050 279 160 9 8 277 7 270 2.86e-37 136
MS.gene43627.t1 AT1G71120 31.962 316 187 12 29 329 27 329 4.15e-37 138
MS.gene43627.t1 AT1G73610 31.288 326 199 10 13 329 16 325 7.85e-37 137
MS.gene43627.t1 AT2G30220 31.157 337 202 14 16 330 11 339 9.91e-37 137
MS.gene43627.t1 AT5G45950 28.571 329 216 11 11 329 18 337 1.25e-35 134
MS.gene43627.t1 AT2G31540 31.343 335 201 13 28 347 30 350 1.38e-35 134
MS.gene43627.t1 AT1G58430 31.230 317 191 14 32 330 34 341 2.58e-35 133
MS.gene43627.t1 AT2G40250 28.528 326 204 10 31 336 34 350 3.85e-35 132
MS.gene43627.t1 AT1G20130 30.357 336 202 10 31 347 182 504 1.24e-34 134
MS.gene43627.t1 AT2G24560 31.503 346 212 14 3 330 2 340 1.56e-34 131
MS.gene43627.t1 AT2G30310 30.696 316 194 13 32 330 33 340 1.61e-34 130
MS.gene43627.t1 AT1G20132 32.298 322 194 13 32 337 60 373 1.74e-34 131
MS.gene43627.t1 AT1G20130 30.357 336 202 10 31 347 202 524 1.82e-34 134
MS.gene43627.t1 AT1G75900 30.539 334 209 11 13 329 18 345 2.12e-34 130
MS.gene43627.t1 AT1G06990 28.834 326 206 10 29 337 33 349 1.02e-33 129
MS.gene43627.t1 AT5G45960 28.875 329 211 10 28 338 42 365 7.72e-33 126
MS.gene43627.t1 AT1G20120 30.968 310 197 11 32 329 77 381 1.52e-32 126
MS.gene43627.t1 AT3G14225 30.659 349 217 11 28 359 32 372 1.14e-31 123
MS.gene43627.t1 AT5G40990 29.570 372 234 12 7 359 10 372 1.45e-31 123
MS.gene43627.t1 AT1G75930 30.909 330 202 13 13 329 8 324 1.79e-31 122
MS.gene43627.t1 AT3G14225 30.199 351 220 11 28 359 32 376 2.51e-31 122
MS.gene43627.t1 AT2G24560 33.213 277 163 12 16 277 11 280 2.91e-30 118
MS.gene43627.t1 AT1G75920 30.838 334 208 12 6 329 4 324 4.09e-30 118
MS.gene43627.t1 AT1G75910 31.420 331 199 13 13 329 8 324 1.69e-29 117
MS.gene43627.t1 AT1G53940 30.286 350 207 15 33 359 39 374 2.35e-28 114
MS.gene43627.t1 AT1G53990 28.307 378 229 13 9 359 1 363 1.40e-27 112
MS.gene43627.t1 AT1G75920 29.480 346 206 13 9 329 2 334 4.58e-26 107
MS.gene43627.t1 AT2G04020 27.937 315 180 10 32 341 42 314 5.00e-26 107
MS.gene43627.t1 AT2G04020 32.524 206 125 5 32 232 42 238 5.23e-26 105
MS.gene43627.t1 AT1G54020 27.487 382 229 16 3 366 7 358 6.36e-26 107
MS.gene43627.t1 AT1G54010 28.080 349 214 14 34 365 37 365 9.45e-25 104
MS.gene43627.t1 AT1G53940 32.258 248 145 11 33 269 39 274 2.82e-24 102
MS.gene43627.t1 AT5G03610 27.446 368 215 16 1 337 1 347 3.30e-24 102
MS.gene43627.t1 AT5G14450 26.772 381 219 12 1 341 12 372 9.62e-24 101
MS.gene43627.t1 AT4G16220 48.305 118 55 4 1 116 1 114 2.01e-23 98.2
MS.gene43627.t1 AT3G14210 26.757 370 217 12 33 375 36 378 2.48e-23 100
MS.gene43627.t1 AT1G31550 27.606 355 195 16 13 330 20 349 2.84e-23 100
MS.gene43627.t1 AT1G54000 26.933 375 230 17 13 366 15 366 3.94e-23 100
MS.gene43627.t1 AT1G28610 27.397 365 209 17 1 330 4 347 8.50e-23 99.0
MS.gene43627.t1 AT1G31550 27.855 359 192 18 13 330 20 352 1.86e-22 98.2
MS.gene43627.t1 AT1G28570 27.195 353 183 14 23 330 28 351 7.81e-22 96.3
MS.gene43627.t1 AT2G27360 27.855 359 212 14 4 330 8 351 3.80e-21 94.4
MS.gene43627.t1 AT1G28580 27.151 372 201 16 4 330 8 354 6.09e-21 94.0
MS.gene43627.t1 AT3G05180 26.023 342 204 11 32 337 35 363 1.15e-20 92.8
MS.gene43627.t1 AT1G28590 27.195 353 203 16 13 330 20 353 1.28e-20 93.2
MS.gene43627.t1 AT1G75920 29.682 283 178 11 57 329 25 296 2.16e-20 91.3
MS.gene43627.t1 AT1G54790 25.419 358 222 11 9 332 8 354 1.35e-19 89.7
MS.gene43627.t1 AT1G75920 28.012 332 189 12 6 329 4 293 1.54e-19 88.6
MS.gene43627.t1 AT1G54030 24.079 353 228 13 34 368 53 383 1.68e-19 89.7
MS.gene43627.t1 AT1G28650 27.371 369 208 18 1 330 7 354 4.23e-19 88.6
MS.gene43627.t1 AT3G09930 26.220 328 195 18 34 337 40 344 4.72e-19 87.8
MS.gene43627.t1 AT3G09930 26.220 328 195 18 34 337 40 344 4.72e-19 87.8
MS.gene43627.t1 AT1G28660 27.042 355 203 17 16 330 13 351 3.24e-18 85.9
MS.gene43627.t1 AT4G01130 24.581 358 221 14 11 332 13 357 8.00e-18 84.7
MS.gene43627.t1 AT1G54790 25.070 359 214 12 13 332 11 353 8.96e-18 84.3
MS.gene43627.t1 AT3G62280 27.660 329 189 15 32 332 35 342 1.41e-17 83.6
MS.gene43627.t1 AT3G27950 25.000 368 228 11 3 338 2 353 4.35e-17 82.4
MS.gene43627.t1 AT5G03600 24.501 351 217 15 10 337 20 345 2.34e-16 80.1
MS.gene43627.t1 AT5G03600 24.847 326 201 16 30 337 11 310 7.88e-16 78.2
MS.gene43627.t1 AT1G28610 32.292 192 105 9 1 179 4 183 1.02e-15 76.6
MS.gene43627.t1 AT1G67830 24.646 353 208 12 19 332 21 354 3.37e-15 76.6
MS.gene43627.t1 AT1G54020 25.338 296 181 12 87 366 1 272 5.18e-15 75.1
MS.gene43627.t1 AT1G54020 25.338 296 181 12 87 366 1 272 5.18e-15 75.1
MS.gene43627.t1 AT1G54020 25.338 296 181 12 87 366 1 272 5.18e-15 75.1
MS.gene43627.t1 AT3G62280 28.736 261 151 12 32 277 35 275 9.50e-15 74.7
MS.gene43627.t1 AT1G54790 23.377 385 214 12 13 332 11 379 2.01e-14 74.7
MS.gene43627.t1 AT1G28600 31.461 178 99 8 8 173 10 176 3.69e-14 71.6
MS.gene43627.t1 AT3G14210 27.197 239 144 8 158 375 21 250 7.36e-14 71.6
MS.gene43627.t1 AT1G56670 25.526 333 205 13 32 338 39 354 8.60e-14 72.4
MS.gene43627.t1 AT1G54030 24.138 232 150 7 33 260 52 261 9.16e-14 72.0
MS.gene43627.t1 AT3G48460 23.284 335 209 13 34 336 39 357 1.77e-13 71.6
MS.gene43627.t1 AT5G45910 27.679 336 190 15 34 330 31 352 2.24e-13 71.2
MS.gene43627.t1 AT4G01130 26.695 236 151 9 11 235 13 237 3.50e-13 70.5
MS.gene43627.t1 AT4G16233 34.400 125 71 6 241 357 6 127 9.16e-13 65.5
MS.gene43627.t1 AT1G54020 26.549 226 140 9 157 366 8 223 3.61e-12 66.2

Find 79 sgRNAs with CRISPR-Local

Find 103 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACCATTTGCAAACATTAA+TGG 0.140996 2.2:+66625175 MS.gene43627:CDS
TTTGATGTGATTACATTTAT+AGG 0.141537 2.2:-66626230 None:intergenic
AATAATTACCATTTGAATTC+TGG 0.175547 2.2:-66625906 None:intergenic
TTGATTGCAGCTCAGCTTCT+TGG 0.213467 2.2:+66625136 MS.gene43627:intron
TGTGGCTTGTTGGATATAAT+TGG 0.215096 2.2:-66625512 None:intergenic
TAACAGGCTTTACATGAAAT+TGG 0.232077 2.2:+66625670 MS.gene43627:intron
ACTGTTTATAAATATGAATT+TGG 0.232432 2.2:-66625866 None:intergenic
AGAGTTATCTTTGAATTTAC+AGG 0.246825 2.2:+66625572 MS.gene43627:CDS
ATGAAAGGCCATGCCATAAT+AGG 0.255257 2.2:+66626054 MS.gene43627:CDS
GTTACCTGGGTTAGGCCTAT+TGG 0.264459 2.2:+66625708 MS.gene43627:CDS
ACACATACTCTCCCCTATTA+TGG 0.313229 2.2:-66626067 None:intergenic
TTACCTGGGTTAGGCCTATT+GGG 0.313526 2.2:+66625709 MS.gene43627:CDS
AAATGTAACTATAAACCTTA+TGG 0.324329 2.2:+66624942 MS.gene43627:CDS
AACTATGCATCTGGCGCAGC+TGG 0.366916 2.2:+66625220 MS.gene43627:CDS
ATAGGGGAGAGTATGTGTTT+TGG 0.376746 2.2:+66626072 MS.gene43627:CDS
GGGCTATAAATGTGGCTTGT+TGG 0.378126 2.2:-66625522 None:intergenic
ACAAGAAACTATGAAGGAAT+TGG 0.384112 2.2:+66626205 MS.gene43627:CDS
TGAAAGGCCATGCCATAATA+GGG 0.385623 2.2:+66626055 MS.gene43627:CDS
TGTTGCAAAACAAGATTGAT+TGG 0.387307 2.2:+66626017 MS.gene43627:CDS
TCGACCGTTGGTAAATCTTC+CGG 0.391397 2.2:-66624988 None:intergenic
TTATGGCATGGCCTTTCATC+AGG 0.402123 2.2:-66626050 None:intergenic
GGAGACTCTTTATCTGATAG+TGG 0.414420 2.2:+66624891 MS.gene43627:CDS
TGAATTCTGGTAATCAGATT+CGG 0.419464 2.2:-66625893 None:intergenic
GTGGCTTGTTGGATATAATT+GGG 0.419954 2.2:-66625511 None:intergenic
TGCTTGTATTATGTGCATAT+TGG 0.423781 2.2:+66625456 MS.gene43627:CDS
GACTTTCCGATGGGACCAAC+CGG 0.425728 2.2:+66624969 MS.gene43627:CDS
CTTACAAACAAGATAAGAAT+AGG 0.427206 2.2:-66624813 None:intergenic
ACAAGGTTCTTAATATCCAT+TGG 0.441001 2.2:-66626179 None:intergenic
CACTTGGAGTGCAGCCCAAT+AGG 0.447176 2.2:-66625723 None:intergenic
ATCTTTACTCATGGGACAGA+TGG 0.453385 2.2:+66625748 MS.gene43627:CDS
GGAACCTAGTCACTGCAATA+AGG 0.456230 2.2:+66626120 MS.gene43627:CDS
ATCGGAAAGTCAATTCCATA+AGG 0.476002 2.2:-66624957 None:intergenic
TCTGATTACCAGAATTCAAA+TGG 0.483791 2.2:+66625898 MS.gene43627:CDS
TCTCAAATTGCTAGCAGACT+TGG 0.484679 2.2:+66625399 MS.gene43627:CDS
CATAATACAAGCATTTGTTA+AGG 0.485419 2.2:-66625446 None:intergenic
AAAGGTGTGAACTATGCATC+TGG 0.486909 2.2:+66625211 MS.gene43627:CDS
GTCAATTGTAGTTCGACCGT+TGG 0.487738 2.2:-66625000 None:intergenic
AAATATGTGTTACCTGGGTT+AGG 0.497677 2.2:+66625700 MS.gene43627:CDS
ATCTGTCCCATGAGTAAAGA+TGG 0.499056 2.2:-66625746 None:intergenic
CCAAGTGCCATCTTTACTCA+TGG 0.503568 2.2:+66625739 MS.gene43627:CDS
TATTGAGACAAGCATGGCTA+AGG 0.505818 2.2:+66625249 MS.gene43627:CDS
GGTTCCAAGCCTCAGTGGTA+TGG 0.506388 2.2:-66626103 None:intergenic
TTTAGTCTTCACTTATCCAA+TGG 0.506831 2.2:+66626163 MS.gene43627:CDS
GCAAGAAAATATGTGTTACC+TGG 0.530877 2.2:+66625694 MS.gene43627:CDS
CCATGAGTAAAGATGGCACT+TGG 0.532433 2.2:-66625739 None:intergenic
GAGCCATTAATGTTTGCAAA+TGG 0.538343 2.2:-66625178 None:intergenic
ATTCACTAGAGATTTAAGCT+TGG 0.538359 2.2:-66625815 None:intergenic
CCATTAATGTTTGCAAATGG+TGG 0.549519 2.2:-66625175 None:intergenic
TATGGAATTGACTTTCCGAT+GGG 0.551000 2.2:+66624960 MS.gene43627:CDS
AATCTTCCGGTTGGTCCCAT+CGG 0.551140 2.2:-66624975 None:intergenic
AATTCCATACCACTGAGGCT+TGG 0.552193 2.2:+66626099 MS.gene43627:CDS
TATTTGCAACAATGTGTCAA+TGG 0.553346 2.2:+66624837 MS.gene43627:CDS
ATCTATAATAAAGACATGGT+TGG 0.556461 2.2:+66624785 MS.gene43627:CDS
TCTTTACTCATGGGACAGAT+GGG 0.557866 2.2:+66625749 MS.gene43627:CDS
TTATGGAATTGACTTTCCGA+TGG 0.567022 2.2:+66624959 MS.gene43627:CDS
TACTCTCCCCTATTATGGCA+TGG 0.572966 2.2:-66626062 None:intergenic
AAGACCTTATTGCAGTGACT+AGG 0.573479 2.2:-66626124 None:intergenic
CAAGAAAATATGTGTTACCT+GGG 0.577135 2.2:+66625695 MS.gene43627:CDS
TGTTGAACAAGAAACTATGA+AGG 0.589319 2.2:+66626199 MS.gene43627:CDS
ACTTGAACTTATTTAACTAG+AGG 0.590873 2.2:-66626261 None:intergenic
GAGGGTGTATTCCTGATGAA+AGG 0.592786 2.2:+66626039 MS.gene43627:CDS
CAAGTGCCATCTTTACTCAT+GGG 0.609109 2.2:+66625740 MS.gene43627:CDS
GAGCTTCAGCATACTGCTGA+GGG 0.610339 2.2:-66625542 None:intergenic
GACAGATGGGTCTTGTGTTG+AGG 0.610700 2.2:+66625762 MS.gene43627:CDS
TGGCTTGTTGGATATAATTG+GGG 0.614511 2.2:-66625510 None:intergenic
AGAGCTTCAGCATACTGCTG+AGG 0.615501 2.2:-66625543 None:intergenic
GCAAAACAAGATTGATTGGA+GGG 0.615989 2.2:+66626021 MS.gene43627:CDS
TCATAGTTTCTTGTTCAACA+AGG 0.617726 2.2:-66626196 None:intergenic
TGCAAAACAAGATTGATTGG+AGG 0.634424 2.2:+66626020 MS.gene43627:CDS
GAAAGGCCATGCCATAATAG+GGG 0.638032 2.2:+66626056 MS.gene43627:CDS
CCGTTGGTAAATCTTCCGGT+TGG 0.639272 2.2:-66624984 None:intergenic
AATGGCTCAGACATACTCAA+AGG 0.641841 2.2:+66625193 MS.gene43627:CDS
ACTGCTGAGGGCTATAAATG+TGG 0.652295 2.2:-66625530 None:intergenic
AATTCGTATTGAGACAAGCA+TGG 0.663192 2.2:+66625243 MS.gene43627:CDS
GACTAGGTTCCAAGCCTCAG+TGG 0.693512 2.2:-66626108 None:intergenic
TGGAATCTATAATAAAGACA+TGG 0.699341 2.2:+66624781 MS.gene43627:CDS
CAGCCCAATAGGCCTAACCC+AGG 0.713718 2.2:-66625712 None:intergenic
GGATGAATTCCATACCACTG+AGG 0.721325 2.2:+66626094 MS.gene43627:CDS
CCAACCGGAAGATTTACCAA+CGG 0.775116 2.2:+66624984 MS.gene43627:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAATTTGTATTGTTAC+AGG + chr2.2:66625326-66625345 MS.gene43627:intron 15.0%
!! AATAAATTTGTATTGTTACA+GGG + chr2.2:66625327-66625346 MS.gene43627:intron 15.0%
!! ACTGTTTATAAATATGAATT+TGG - chr2.2:66625869-66625888 None:intergenic 15.0%
!! AAATGTAACTATAAACCTTA+TGG + chr2.2:66624942-66624961 MS.gene43627:CDS 20.0%
!! AATAATTACCATTTGAATTC+TGG - chr2.2:66625909-66625928 None:intergenic 20.0%
!! CATAATATGGATAAGTTAAA+AGG - chr2.2:66625040-66625059 None:intergenic 20.0%
!! TTTGATGTGATTACATTTAT+AGG - chr2.2:66626233-66626252 None:intergenic 20.0%
! AGAGTTATCTTTGAATTTAC+AGG + chr2.2:66625572-66625591 MS.gene43627:CDS 25.0%
! ATCTATAATAAAGACATGGT+TGG + chr2.2:66624785-66624804 MS.gene43627:CDS 25.0%
! CTTACAAACAAGATAAGAAT+AGG - chr2.2:66624816-66624835 None:intergenic 25.0%
! GAACAATCAAAGAAATGAAA+AGG - chr2.2:66625300-66625319 None:intergenic 25.0%
! TGAGATGAATCAAAAGTTTA+AGG - chr2.2:66625101-66625120 None:intergenic 25.0%
! TGGAATCTATAATAAAGACA+TGG + chr2.2:66624781-66624800 MS.gene43627:CDS 25.0%
! TGGAATTAAAAATGAATGCA+AGG - chr2.2:66625798-66625817 None:intergenic 25.0%
!! CATAATACAAGCATTTGTTA+AGG - chr2.2:66625449-66625468 None:intergenic 25.0%
!! TTTATAGTTACATTTTGCAG+AGG - chr2.2:66624937-66624956 None:intergenic 25.0%
!!! ATTTTACTGTGTTTGATTTC+AGG + chr2.2:66625972-66625991 MS.gene43627:intron 25.0%
!!! TGGTTTATAATAGAAGCATT+TGG + chr2.2:66625641-66625660 MS.gene43627:intron 25.0%
AAGCATTTGGTATATGTAAC+AGG + chr2.2:66625654-66625673 MS.gene43627:intron 30.0%
ACAAGAAACTATGAAGGAAT+TGG + chr2.2:66626205-66626224 MS.gene43627:CDS 30.0%
ACAAGGTTCTTAATATCCAT+TGG - chr2.2:66626182-66626201 None:intergenic 30.0%
ACACTTCATGGTTCATAATA+TGG - chr2.2:66625053-66625072 None:intergenic 30.0%
ATTCACTAGAGATTTAAGCT+TGG - chr2.2:66625818-66625837 None:intergenic 30.0%
CAAGAAAATATGTGTTACCT+GGG + chr2.2:66625695-66625714 MS.gene43627:CDS 30.0%
GAACAAAGAAAAACACTTCA+TGG - chr2.2:66625065-66625084 None:intergenic 30.0%
TAACAGGCTTTACATGAAAT+TGG + chr2.2:66625670-66625689 MS.gene43627:intron 30.0%
TATTTGCAACAATGTGTCAA+TGG + chr2.2:66624837-66624856 MS.gene43627:CDS 30.0%
TCATAGTTTCTTGTTCAACA+AGG - chr2.2:66626199-66626218 None:intergenic 30.0%
TCTCCAAAGATAAAAAGACA+AGG - chr2.2:66624876-66624895 None:intergenic 30.0%
TCTGATTACCAGAATTCAAA+TGG + chr2.2:66625898-66625917 MS.gene43627:CDS 30.0%
TGAATTCTGGTAATCAGATT+CGG - chr2.2:66625896-66625915 None:intergenic 30.0%
TGCTTGTATTATGTGCATAT+TGG + chr2.2:66625456-66625475 MS.gene43627:CDS 30.0%
TGTTGAACAAGAAACTATGA+AGG + chr2.2:66626199-66626218 MS.gene43627:CDS 30.0%
TGTTGCAAAACAAGATTGAT+TGG + chr2.2:66626017-66626036 MS.gene43627:CDS 30.0%
! TTTAGTCTTCACTTATCCAA+TGG + chr2.2:66626163-66626182 MS.gene43627:CDS 30.0%
! TTTGCTTTCACATTTGTTGA+TGG + chr2.2:66625621-66625640 MS.gene43627:intron 30.0%
!!! ATCAATCTTGTTTTGCAACA+AGG - chr2.2:66626017-66626036 None:intergenic 30.0%
!!! GTGTTTGATTTCAGGTTTTT+TGG + chr2.2:66625980-66625999 MS.gene43627:intron 30.0%
AAATATGTGTTACCTGGGTT+AGG + chr2.2:66625700-66625719 MS.gene43627:CDS 35.0%
AATTCGTATTGAGACAAGCA+TGG + chr2.2:66625243-66625262 MS.gene43627:CDS 35.0%
AGTGAAACACAAAGTTCAAG+TGG - chr2.2:66625601-66625620 None:intergenic 35.0%
ATCGGAAAGTCAATTCCATA+AGG - chr2.2:66624960-66624979 None:intergenic 35.0%
CCACCATTTGCAAACATTAA+TGG + chr2.2:66625175-66625194 MS.gene43627:CDS 35.0%
CCATTAATGTTTGCAAATGG+TGG - chr2.2:66625178-66625197 None:intergenic 35.0%
GAGCCATTAATGTTTGCAAA+TGG - chr2.2:66625181-66625200 None:intergenic 35.0%
GCAAAACAAGATTGATTGGA+GGG + chr2.2:66626021-66626040 MS.gene43627:CDS 35.0%
GCAAGAAAATATGTGTTACC+TGG + chr2.2:66625694-66625713 MS.gene43627:CDS 35.0%
TGCAAAACAAGATTGATTGG+AGG + chr2.2:66626020-66626039 MS.gene43627:CDS 35.0%
! AGATAAAAAGACAAGGCACT+TGG - chr2.2:66624869-66624888 None:intergenic 35.0%
! GATAAAAAGACAAGGCACTT+GGG - chr2.2:66624868-66624887 None:intergenic 35.0%
! GTGCCTTGTCTTTTTATCTT+TGG + chr2.2:66624870-66624889 MS.gene43627:CDS 35.0%
! TAGTTACATTTTGCAGAGGT+AGG - chr2.2:66624933-66624952 None:intergenic 35.0%
! TATGGAATTGACTTTCCGAT+GGG + chr2.2:66624960-66624979 MS.gene43627:CDS 35.0%
! TTATGGAATTGACTTTCCGA+TGG + chr2.2:66624959-66624978 MS.gene43627:CDS 35.0%
!! GTGGCTTGTTGGATATAATT+GGG - chr2.2:66625514-66625533 None:intergenic 35.0%
!! TGGCTTGTTGGATATAATTG+GGG - chr2.2:66625513-66625532 None:intergenic 35.0%
!! TGTGGCTTGTTGGATATAAT+TGG - chr2.2:66625515-66625534 None:intergenic 35.0%
AAGACCTTATTGCAGTGACT+AGG - chr2.2:66626127-66626146 None:intergenic 40.0%
AATGGCTCAGACATACTCAA+AGG + chr2.2:66625193-66625212 MS.gene43627:CDS 40.0%
ACACATACTCTCCCCTATTA+TGG - chr2.2:66626070-66626089 None:intergenic 40.0%
ATCTGTCCCATGAGTAAAGA+TGG - chr2.2:66625749-66625768 None:intergenic 40.0%
ATCTTTACTCATGGGACAGA+TGG + chr2.2:66625748-66625767 MS.gene43627:CDS 40.0%
ATGAAAGGCCATGCCATAAT+AGG + chr2.2:66626054-66626073 MS.gene43627:CDS 40.0%
CAAGTGCCATCTTTACTCAT+GGG + chr2.2:66625740-66625759 MS.gene43627:CDS 40.0%
GGAGACTCTTTATCTGATAG+TGG + chr2.2:66624891-66624910 MS.gene43627:CDS 40.0%
TATTGAGACAAGCATGGCTA+AGG + chr2.2:66625249-66625268 MS.gene43627:CDS 40.0%
TCTCAAATTGCTAGCAGACT+TGG + chr2.2:66625399-66625418 MS.gene43627:CDS 40.0%
TCTTTACTCATGGGACAGAT+GGG + chr2.2:66625749-66625768 MS.gene43627:CDS 40.0%
TGAAAGGCCATGCCATAATA+GGG + chr2.2:66626055-66626074 MS.gene43627:CDS 40.0%
! AAAGGTGTGAACTATGCATC+TGG + chr2.2:66625211-66625230 MS.gene43627:CDS 40.0%
! TACATTTTGCAGAGGTAGGA+AGG - chr2.2:66624929-66624948 None:intergenic 40.0%
!! ACAGGGTTTTGTCATCAGTT+TGG + chr2.2:66625344-66625363 MS.gene43627:intron 40.0%
!! ATAGGGGAGAGTATGTGTTT+TGG + chr2.2:66626072-66626091 MS.gene43627:CDS 40.0%
!! CAGGGTTTTGTCATCAGTTT+GGG + chr2.2:66625345-66625364 MS.gene43627:intron 40.0%
!! TAGGGGAGAGTATGTGTTTT+GGG + chr2.2:66626073-66626092 MS.gene43627:CDS 40.0%
AATTCCATACCACTGAGGCT+TGG + chr2.2:66626099-66626118 MS.gene43627:CDS 45.0%
ACTGCTGAGGGCTATAAATG+TGG - chr2.2:66625533-66625552 None:intergenic 45.0%
CCAACCGGAAGATTTACCAA+CGG + chr2.2:66624984-66625003 MS.gene43627:CDS 45.0%
CCAAGTGCCATCTTTACTCA+TGG + chr2.2:66625739-66625758 MS.gene43627:CDS 45.0%
CCATGAGTAAAGATGGCACT+TGG - chr2.2:66625742-66625761 None:intergenic 45.0%
GAAAGGCCATGCCATAATAG+GGG + chr2.2:66626056-66626075 MS.gene43627:CDS 45.0%
GGAACCTAGTCACTGCAATA+AGG + chr2.2:66626120-66626139 MS.gene43627:CDS 45.0%
GGATGAATTCCATACCACTG+AGG + chr2.2:66626094-66626113 MS.gene43627:CDS 45.0%
GTCAATTGTAGTTCGACCGT+TGG - chr2.2:66625003-66625022 None:intergenic 45.0%
TACTCTCCCCTATTATGGCA+TGG - chr2.2:66626065-66626084 None:intergenic 45.0%
TTATGGCATGGCCTTTCATC+AGG - chr2.2:66626053-66626072 None:intergenic 45.0%
TTGATTGCAGCTCAGCTTCT+TGG + chr2.2:66625136-66625155 MS.gene43627:intron 45.0%
! GAGGGTGTATTCCTGATGAA+AGG + chr2.2:66626039-66626058 MS.gene43627:CDS 45.0%
! GGGCTATAAATGTGGCTTGT+TGG - chr2.2:66625525-66625544 None:intergenic 45.0%
! TCGACCGTTGGTAAATCTTC+CGG - chr2.2:66624991-66625010 None:intergenic 45.0%
! TTACCTGGGTTAGGCCTATT+GGG + chr2.2:66625709-66625728 MS.gene43627:CDS 45.0%
AGAGCTTCAGCATACTGCTG+AGG - chr2.2:66625546-66625565 None:intergenic 50.0%
GAGCTTCAGCATACTGCTGA+GGG - chr2.2:66625545-66625564 None:intergenic 50.0%
! AATCTTCCGGTTGGTCCCAT+CGG - chr2.2:66624978-66624997 None:intergenic 50.0%
! CCGTTGGTAAATCTTCCGGT+TGG - chr2.2:66624987-66625006 None:intergenic 50.0%
! GACAGATGGGTCTTGTGTTG+AGG + chr2.2:66625762-66625781 MS.gene43627:CDS 50.0%
! GTTACCTGGGTTAGGCCTAT+TGG + chr2.2:66625708-66625727 MS.gene43627:CDS 50.0%
AACTATGCATCTGGCGCAGC+TGG + chr2.2:66625220-66625239 MS.gene43627:CDS 55.0%
CACTTGGAGTGCAGCCCAAT+AGG - chr2.2:66625726-66625745 None:intergenic 55.0%
GACTAGGTTCCAAGCCTCAG+TGG - chr2.2:66626111-66626130 None:intergenic 55.0%
GACTTTCCGATGGGACCAAC+CGG + chr2.2:66624969-66624988 MS.gene43627:CDS 55.0%
GGTTCCAAGCCTCAGTGGTA+TGG - chr2.2:66626106-66626125 None:intergenic 55.0%
CAGCCCAATAGGCCTAACCC+AGG - chr2.2:66625715-66625734 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 66624780 66626271 66624780 ID=MS.gene43627
chr2.2 mRNA 66624780 66626271 66624780 ID=MS.gene43627.t1;Parent=MS.gene43627
chr2.2 exon 66624780 66625029 66624780 ID=MS.gene43627.t1.exon1;Parent=MS.gene43627.t1
chr2.2 CDS 66624780 66625029 66624780 ID=cds.MS.gene43627.t1;Parent=MS.gene43627.t1
chr2.2 exon 66625146 66625270 66625146 ID=MS.gene43627.t1.exon2;Parent=MS.gene43627.t1
chr2.2 CDS 66625146 66625270 66625146 ID=cds.MS.gene43627.t1;Parent=MS.gene43627.t1
chr2.2 exon 66625348 66625593 66625348 ID=MS.gene43627.t1.exon3;Parent=MS.gene43627.t1
chr2.2 CDS 66625348 66625593 66625348 ID=cds.MS.gene43627.t1;Parent=MS.gene43627.t1
chr2.2 exon 66625676 66625919 66625676 ID=MS.gene43627.t1.exon4;Parent=MS.gene43627.t1
chr2.2 CDS 66625676 66625919 66625676 ID=cds.MS.gene43627.t1;Parent=MS.gene43627.t1
chr2.2 exon 66625994 66626271 66625994 ID=MS.gene43627.t1.exon5;Parent=MS.gene43627.t1
chr2.2 CDS 66625994 66626271 66625994 ID=cds.MS.gene43627.t1;Parent=MS.gene43627.t1
Gene Sequence

>MS.gene43627

ATGGAATCTATAATAAAGACATGGTTGGTGTTGCCTATTCTTATCTTGTTTGTAAGCTATTTGCAACAATGTGTCAATGGAAAATCCCAAGTGCCTTGTCTTTTTATCTTTGGAGACTCTTTATCTGATAGTGGAAACAACAATAACCTTCCTACCTCTGCAAAATGTAACTATAAACCTTATGGAATTGACTTTCCGATGGGACCAACCGGAAGATTTACCAACGGTCGAACTACAATTGACATAATAAGTAACATCCTTTTAACTTATCCATATTATGAACCATGAAGTGTTTTTCTTTGTTCTTTTCTCTTGTTACCTTAAACTTTTGATTCATCTCAAACTATGAAGTTATTTTGATTGCAGCTCAGCTTCTTGGCTTTGAGAACTTCATTCCACCATTTGCAAACATTAATGGCTCAGACATACTCAAAGGTGTGAACTATGCATCTGGCGCAGCTGGAATTCGTATTGAGACAAGCATGGCTAAGGTTTAAATAAATTAGAAATCAAAGAACCTTTTCATTTCTTTGATTGTTCATCTTTAAATAAATTTGTATTGTTACAGGGTTTTGTCATCAGTTTGGGATTACAGTTAAAAAATCACAAAGTTATAGTTTCTCAAATTGCTAGCAGACTTGGAAGTCTTAACAAAGCTCAAGAATACCTTAACAAATGCTTGTATTATGTGCATATTGGTAGTAATGATTACATAAACAATTATTTTCTTCCCCAATTATATCCAACAAGCCACATTTATAGCCCTCAGCAGTATGCTGAAGCTCTAATTGAAGAGTTATCTTTGAATTTACAGGTATCCACTTGAACTTTGTGTTTCACTTTTGCTTTCACATTTGTTGATGGTTTATAATAGAAGCATTTGGTATATGTAACAGGCTTTACATGAAATTGGAGCAAGAAAATATGTGTTACCTGGGTTAGGCCTATTGGGCTGCACTCCAAGTGCCATCTTTACTCATGGGACAGATGGGTCTTGTGTTGAGGAGCAAAATGACCTTGCATTCATTTTTAATTCCAAGCTTAAATCTCTAGTGAATCATTTCAATAATAAGTTCTCTGCTGATTCCAAATTCATATTTATAAACAGTACATCCGAATCTGATTACCAGAATTCAAATGGTAATTATTTTAGTTTACTTAAACTTCAATTCATATACTATAATTAAAATCAATTTTACTGTGTTTGATTTCAGGTTTTTTGGTTGCAAATGCTCCTTGTTGCAAAACAAGATTGATTGGAGGGTGTATTCCTGATGAAAGGCCATGCCATAATAGGGGAGAGTATGTGTTTTGGGATGAATTCCATACCACTGAGGCTTGGAACCTAGTCACTGCAATAAGGTCTTATAATTCATATAATAATTTAGTCTTCACTTATCCAATGGATATTAAGAACCTTGTTGAACAAGAAACTATGAAGGAATTGGAGCCTATAAATGTAATCACATCAAAGCTTAGTGCCTCTAGTTAA
Protein sequence

>MS.gene43627.t1

MESIIKTWLVLPILILFVSYLQQCVNGKSQVPCLFIFGDSLSDSGNNNNLPTSAKCNYKPYGIDFPMGPTGRFTNGRTTIDIITQLLGFENFIPPFANINGSDILKGVNYASGAAGIRIETSMAKGFVISLGLQLKNHKVIVSQIASRLGSLNKAQEYLNKCLYYVHIGSNDYINNYFLPQLYPTSHIYSPQQYAEALIEELSLNLQALHEIGARKYVLPGLGLLGCTPSAIFTHGTDGSCVEEQNDLAFIFNSKLKSLVNHFNNKFSADSKFIFINSTSESDYQNSNGFLVANAPCCKTRLIGGCIPDERPCHNRGEYVFWDEFHTTEAWNLVTAIRSYNSYNNLVFTYPMDIKNLVEQETMKELEPINVITSKLSASS