Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43752.t1 | RHN56435.1 | 97.1 | 519 | 15 | 0 | 1 | 519 | 79 | 597 | 1.10E-283 | 985.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43752.t1 | Q66GI9 | 69.9 | 509 | 137 | 6 | 11 | 515 | 34 | 530 | 6.0e-195 | 681.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43752.t1 | G7KE37 | 97.1 | 519 | 15 | 0 | 1 | 519 | 1 | 519 | 7.6e-284 | 985.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene43752 | MS.gene93642 | PPI |
| MS.gene43752 | MS.gene67345 | PPI |
| MS.gene43752 | MS.gene021154 | PPI |
| MS.gene43752 | MS.gene30561 | PPI |
| MS.gene43752 | MS.gene004003 | PPI |
| MS.gene43752 | MS.gene45934 | PPI |
| MS.gene43752 | MS.gene054996 | PPI |
| MS.gene43752 | MS.gene41133 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43752.t1 | MTR_5g069630 | 98.266 | 519 | 9 | 0 | 1 | 519 | 1 | 519 | 0.0 | 1032 |
| MS.gene43752.t1 | MTR_7g066780 | 55.635 | 417 | 181 | 1 | 96 | 512 | 93 | 505 | 2.29e-165 | 478 |
| MS.gene43752.t1 | MTR_8g030600 | 39.627 | 429 | 250 | 3 | 84 | 512 | 167 | 586 | 1.01e-106 | 331 |
| MS.gene43752.t1 | MTR_3g463080 | 40.528 | 417 | 241 | 2 | 96 | 512 | 105 | 514 | 2.43e-104 | 322 |
| MS.gene43752.t1 | MTR_7g077830 | 39.089 | 417 | 247 | 2 | 96 | 512 | 123 | 532 | 1.05e-103 | 321 |
| MS.gene43752.t1 | MTR_8g030600 | 40.882 | 340 | 193 | 2 | 84 | 423 | 167 | 498 | 2.86e-84 | 270 |
| MS.gene43752.t1 | MTR_4g116030 | 32.850 | 414 | 256 | 5 | 97 | 499 | 110 | 512 | 7.30e-66 | 222 |
| MS.gene43752.t1 | MTR_4g030900 | 29.318 | 440 | 287 | 7 | 97 | 515 | 7 | 443 | 1.07e-53 | 187 |
| MS.gene43752.t1 | MTR_2g027710 | 39.877 | 163 | 98 | 0 | 314 | 476 | 72 | 234 | 2.69e-40 | 146 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43752.t1 | AT3G46980 | 69.941 | 509 | 137 | 6 | 11 | 515 | 82 | 578 | 0.0 | 692 |
| MS.gene43752.t1 | AT3G46980 | 69.941 | 509 | 137 | 6 | 11 | 515 | 34 | 530 | 0.0 | 691 |
| MS.gene43752.t1 | AT3G46980 | 69.941 | 509 | 137 | 6 | 11 | 515 | 34 | 530 | 0.0 | 691 |
| MS.gene43752.t1 | AT3G46980 | 75.783 | 351 | 82 | 2 | 167 | 515 | 1 | 350 | 0.0 | 555 |
| MS.gene43752.t1 | AT3G46980 | 75.783 | 351 | 82 | 2 | 167 | 515 | 1 | 350 | 0.0 | 555 |
| MS.gene43752.t1 | AT3G46980 | 75.783 | 351 | 82 | 2 | 167 | 515 | 1 | 350 | 0.0 | 555 |
| MS.gene43752.t1 | AT3G46980 | 75.783 | 351 | 82 | 2 | 167 | 515 | 1 | 350 | 0.0 | 555 |
| MS.gene43752.t1 | AT2G38060 | 56.563 | 419 | 176 | 2 | 96 | 512 | 97 | 511 | 6.67e-166 | 480 |
| MS.gene43752.t1 | AT3G46980 | 74.564 | 287 | 70 | 2 | 231 | 515 | 1 | 286 | 3.08e-157 | 449 |
| MS.gene43752.t1 | AT2G38060 | 56.986 | 365 | 151 | 2 | 96 | 458 | 97 | 457 | 2.60e-141 | 419 |
| MS.gene43752.t1 | AT4G00370 | 35.953 | 509 | 302 | 6 | 18 | 512 | 41 | 539 | 4.47e-107 | 330 |
| MS.gene43752.t1 | AT2G29650 | 36.770 | 514 | 286 | 7 | 22 | 512 | 13 | 510 | 9.21e-105 | 323 |
| MS.gene43752.t1 | AT2G29650 | 40.250 | 400 | 232 | 2 | 113 | 512 | 6 | 398 | 3.71e-99 | 305 |
| MS.gene43752.t1 | AT2G29650 | 40.506 | 395 | 228 | 2 | 118 | 512 | 1 | 388 | 8.15e-99 | 304 |
| MS.gene43752.t1 | AT2G29650 | 36.160 | 401 | 218 | 6 | 22 | 399 | 13 | 398 | 1.49e-74 | 241 |
| MS.gene43752.t1 | AT5G20380 | 32.282 | 412 | 257 | 5 | 96 | 498 | 97 | 495 | 4.42e-65 | 220 |
| MS.gene43752.t1 | AT5G20380 | 32.282 | 412 | 257 | 5 | 96 | 498 | 149 | 547 | 1.53e-64 | 220 |
| MS.gene43752.t1 | AT5G44370 | 30.254 | 433 | 281 | 8 | 96 | 515 | 8 | 432 | 1.56e-56 | 195 |
Find 142 sgRNAs with CRISPR-Local
Find 434 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGATTTCTCGTGAACTTTC+AGG | 0.171662 | 5.1:-54009421 | MS.gene43752:intron |
| GGAACACTTGCTGCTATAAT+TGG | 0.202615 | 5.1:-54008756 | MS.gene43752:CDS |
| CCTTACTGAGTTGAAGTAAA+TGG | 0.216251 | 5.1:+54010433 | None:intergenic |
| CGCTTTCTCTGGAATTGTTC+AGG | 0.218765 | 5.1:-54013338 | MS.gene43752:intron |
| CAGAGCCGCCATTGGGAAAT+TGG | 0.227623 | 5.1:+54013602 | None:intergenic |
| TTGGTTTGTCTGGGTTTCTT+TGG | 0.242510 | 5.1:-54010979 | MS.gene43752:CDS |
| ATGTCACAAGGCGGTATATT+TGG | 0.276201 | 5.1:-54011016 | MS.gene43752:CDS |
| CGCTGCAGAGACTTCCCTAT+TGG | 0.301137 | 5.1:-54011900 | MS.gene43752:CDS |
| TGAACTACCTTGCTGGCTTT+TGG | 0.308899 | 5.1:-54010250 | MS.gene43752:CDS |
| GGTCCTGGAGTTAGCCTCAT+TGG | 0.317463 | 5.1:-54009522 | MS.gene43752:CDS |
| GTTCCTTTATCTGTTGCTAA+TGG | 0.318241 | 5.1:-54013370 | MS.gene43752:CDS |
| CTGCAAACGCCATGCATAGC+TGG | 0.327776 | 5.1:-54010775 | MS.gene43752:CDS |
| GGTTTCTTTGGGTGTTGGTC+TGG | 0.335196 | 5.1:-54010967 | MS.gene43752:CDS |
| TGAACGGGTGAAGTTGAGTT+TGG | 0.342221 | 5.1:+54013642 | None:intergenic |
| GCCTTTGGCTTGAAATCCTT+TGG | 0.344433 | 5.1:-54009450 | MS.gene43752:CDS |
| GTTGAAGCTGTTGTTGTTGT+TGG | 0.359312 | 5.1:+54013500 | None:intergenic |
| GAGTTTGGGTGAGTGGAAAT+TGG | 0.361484 | 5.1:+54013657 | None:intergenic |
| GTCTGGGTTTCTTTGGGTGT+TGG | 0.364306 | 5.1:-54010972 | MS.gene43752:CDS |
| TGGTTTGTCTGGGTTTCTTT+GGG | 0.370638 | 5.1:-54010978 | MS.gene43752:CDS |
| GCCCTTGCCCGTTCAGTTTG+AGG | 0.373252 | 5.1:+54011106 | None:intergenic |
| CAACCATTAGCAACAGATAA+AGG | 0.373341 | 5.1:+54013367 | None:intergenic |
| GCTTGGCTAACATTAGCCTT+TGG | 0.378702 | 5.1:-54009465 | MS.gene43752:CDS |
| CTTGGTTTAGTGCCGTTCCA+TGG | 0.378789 | 5.1:-54010289 | MS.gene43752:CDS |
| GGTTGGACTCGCGCTTTCTC+TGG | 0.382881 | 5.1:-54013349 | MS.gene43752:CDS |
| GGACGACAAGTAAAGCCAAT+AGG | 0.390583 | 5.1:+54011885 | None:intergenic |
| TAGAGTATAGGCAGTAGAAA+AGG | 0.395049 | 5.1:+54008646 | None:intergenic |
| CTTTATCTGTTGCTAATGGT+TGG | 0.400386 | 5.1:-54013366 | MS.gene43752:CDS |
| GAGATCGCACCACAGTATTC+TGG | 0.404867 | 5.1:-54009308 | MS.gene43752:CDS |
| CTTGTCGTCCGTGCTTTGCT+TGG | 0.406235 | 5.1:-54011872 | MS.gene43752:CDS |
| GGGTATTTGATTTCACCTAT+AGG | 0.418857 | 5.1:-54012013 | MS.gene43752:CDS |
| TGGAAAAGTGGTAATGGCTT+GGG | 0.420023 | 5.1:-54011963 | MS.gene43752:CDS |
| GCTATCATGAACTACCTTGC+TGG | 0.423028 | 5.1:-54010257 | MS.gene43752:CDS |
| GCTGTTGTTGTTGTTGGTGG+TGG | 0.431056 | 5.1:+54013506 | None:intergenic |
| GCTCATTCACTGCAGTCCAT+TGG | 0.433703 | 5.1:-54009552 | MS.gene43752:intron |
| GCTGTTGGAATTTCGATGGC+TGG | 0.440401 | 5.1:-54011085 | MS.gene43752:CDS |
| AGTGGTGGCGATGCTCGCTT+TGG | 0.452450 | 5.1:-54013440 | MS.gene43752:CDS |
| AAAGGGCAGCAAGAAAATAT+AGG | 0.454954 | 5.1:+54008664 | None:intergenic |
| CTTACTGAGTTGAAGTAAAT+GGG | 0.455623 | 5.1:+54010434 | None:intergenic |
| TTGAAATCCTTTGGTCACTC+TGG | 0.459693 | 5.1:-54009441 | MS.gene43752:CDS |
| CACGGAGGCGGAGAAGGGAG+CGG | 0.461840 | 5.1:+54013572 | None:intergenic |
| CTCTCTCTCCTGTAGAGTAT+AGG | 0.462250 | 5.1:+54008634 | None:intergenic |
| ACTGAACGGGCAAGGGCTGT+TGG | 0.465381 | 5.1:-54011100 | MS.gene43752:CDS |
| GAACGGGTGAAGTTGAGTTT+GGG | 0.467788 | 5.1:+54013643 | None:intergenic |
| AAGAAACACGGAGGCGGAGA+AGG | 0.467861 | 5.1:+54013566 | None:intergenic |
| ACCAACATTCCTCCACCTAT+AGG | 0.473248 | 5.1:+54011998 | None:intergenic |
| ACCCCTCAGTTGCTTCTGCT+TGG | 0.475369 | 5.1:-54009482 | MS.gene43752:CDS |
| TTGGTTTAGTGCCGTTCCAT+GGG | 0.479267 | 5.1:-54010288 | MS.gene43752:CDS |
| TTCTACTGCCTATACTCTAC+AGG | 0.479860 | 5.1:-54008642 | MS.gene43752:CDS |
| TTAACTTTCTTTGCCTCCAC+CGG | 0.480398 | 5.1:+54010854 | None:intergenic |
| CTATGGTGGAAAAGTGGTAA+TGG | 0.480923 | 5.1:-54011969 | MS.gene43752:CDS |
| AGGTATATCATGTCGATCTC+AGG | 0.481227 | 5.1:-54010319 | MS.gene43752:CDS |
| TTTCAGCTTGGATGTGCGAT+AGG | 0.482350 | 5.1:-54011061 | MS.gene43752:CDS |
| TTTATTCGGAAATGGTGAAC+GGG | 0.482549 | 5.1:+54013627 | None:intergenic |
| GCGGAGAAGGGAGCGGAGAG+AGG | 0.488710 | 5.1:+54013579 | None:intergenic |
| ATGGTTTCCTCAAACTGAAC+GGG | 0.489867 | 5.1:-54011113 | MS.gene43752:CDS |
| TTCCTCAAACTGAACGGGCA+AGG | 0.491223 | 5.1:-54011108 | MS.gene43752:CDS |
| GATATCTGAGGACTTCGGTC+AGG | 0.491544 | 5.1:+54010923 | None:intergenic |
| ATAATTGGAACAGTTGGAGC+TGG | 0.492095 | 5.1:-54008741 | MS.gene43752:CDS |
| ACCGCCTTGTGACATGAGAA+TGG | 0.493092 | 5.1:+54011024 | None:intergenic |
| GAGAGAGGCAGAGCCGCCAT+TGG | 0.497695 | 5.1:+54013594 | None:intergenic |
| GAAGCTGTTGTTGTTGTTGG+TGG | 0.499475 | 5.1:+54013503 | None:intergenic |
| ACCTATAGGTGGAGGAATGT+TGG | 0.502436 | 5.1:-54011999 | MS.gene43752:CDS |
| TGCAAACGCCATGCATAGCT+GGG | 0.502609 | 5.1:-54010774 | MS.gene43752:intron |
| AGAGAGGCAGAGCCGCCATT+GGG | 0.504144 | 5.1:+54013595 | None:intergenic |
| GCTGCTATAATTGGAACAGT+TGG | 0.504312 | 5.1:-54008747 | MS.gene43752:CDS |
| GGGTAATGTTGGTGGTTTAG+CGG | 0.507274 | 5.1:+54013702 | None:intergenic |
| CAGTATTCTGGTGTTATACA+TGG | 0.508481 | 5.1:-54009296 | MS.gene43752:intron |
| TGAAGTTGAGTTTGGGTGAG+TGG | 0.513103 | 5.1:+54013650 | None:intergenic |
| GTGGAAAAGTGGTAATGGCT+TGG | 0.513430 | 5.1:-54011964 | MS.gene43752:CDS |
| GACGACAAGTAAAGCCAATA+GGG | 0.514403 | 5.1:+54011886 | None:intergenic |
| AGTGGTAATGGCTTGGGGTG+TGG | 0.514583 | 5.1:-54011957 | MS.gene43752:CDS |
| GGAATGTTGGTGGATAACTA+TGG | 0.515203 | 5.1:-54011986 | MS.gene43752:CDS |
| TCCTCAAACTGAACGGGCAA+GGG | 0.516195 | 5.1:-54011107 | MS.gene43752:CDS |
| TGGCTTGGGGTGTGGCATTG+TGG | 0.517703 | 5.1:-54011949 | MS.gene43752:CDS |
| AGAAACACGGAGGCGGAGAA+GGG | 0.519037 | 5.1:+54013567 | None:intergenic |
| TCAGATATCAAAATATGAGC+TGG | 0.520475 | 5.1:-54010909 | MS.gene43752:CDS |
| CCGCCTTGTGACATGAGAAT+GGG | 0.522325 | 5.1:+54011025 | None:intergenic |
| TTGATTTCACCTATAGGTGG+AGG | 0.522773 | 5.1:-54012007 | MS.gene43752:CDS |
| TCGATCTCAGGCAGGCAGCT+TGG | 0.528764 | 5.1:-54010307 | MS.gene43752:CDS |
| GGTTGCTCCGCCGAAAATGA+TGG | 0.530785 | 5.1:+54013726 | None:intergenic |
| TGCCGTTCCATGGGTTGTGA+TGG | 0.531447 | 5.1:-54010279 | MS.gene43752:CDS |
| GTAGGAATGGCAAATACTGC+TGG | 0.539160 | 5.1:-54008777 | MS.gene43752:intron |
| TTCAGCTTGGATGTGCGATA+GGG | 0.540655 | 5.1:-54011060 | MS.gene43752:CDS |
| GGAAAAGTGGTAATGGCTTG+GGG | 0.543686 | 5.1:-54011962 | MS.gene43752:CDS |
| GCATGAATAACATGGTGGCC+AGG | 0.543904 | 5.1:-54011823 | MS.gene43752:intron |
| AGAGTATAGGCAGTAGAAAA+GGG | 0.544393 | 5.1:+54008647 | None:intergenic |
| TCGATGGCTGGATTTCAGCT+TGG | 0.549464 | 5.1:-54011073 | MS.gene43752:CDS |
| GAGCTAGTTGGTTCATTCCG+AGG | 0.550210 | 5.1:-54008708 | MS.gene43752:CDS |
| TAGGGAAGTCTCTGCAGCGA+AGG | 0.551480 | 5.1:+54011904 | None:intergenic |
| ATTGACTCGTAAGATTATGC+AGG | 0.555441 | 5.1:-54010192 | MS.gene43752:intron |
| AAGGGCTGTTGGAATTTCGA+TGG | 0.561576 | 5.1:-54011089 | MS.gene43752:CDS |
| GCTTTGCTTGGTCTAGCTGA+AGG | 0.563691 | 5.1:-54011860 | MS.gene43752:CDS |
| GAAAGTAAGCGTCTGAAAGG+AGG | 0.565154 | 5.1:+54010824 | None:intergenic |
| TTTGAAAGTAAGCGTCTGAA+AGG | 0.567422 | 5.1:+54010821 | None:intergenic |
| ACCAAAGGATTTCAAGCCAA+AGG | 0.574114 | 5.1:+54009449 | None:intergenic |
| AAAGTAAGCGTCTGAAAGGA+GGG | 0.577273 | 5.1:+54010825 | None:intergenic |
| TATTTGATTTCACCTATAGG+TGG | 0.583694 | 5.1:-54012010 | MS.gene43752:CDS |
| ATGATAGCCATCACAACCCA+TGG | 0.591261 | 5.1:+54010272 | None:intergenic |
| TCCAGGACCAACAAAACCAA+TGG | 0.593248 | 5.1:+54009536 | None:intergenic |
| GCCACCATGTTATTCATGCA+AGG | 0.595628 | 5.1:+54011827 | None:intergenic |
| AAGCATTACCCAGCTATGCA+TGG | 0.596028 | 5.1:+54010766 | None:intergenic |
| TTGCAGTTGCTAAACCAATG+AGG | 0.597816 | 5.1:+54009508 | None:intergenic |
| TATAGGTGGAGGAATGTTGG+TGG | 0.598602 | 5.1:-54011996 | MS.gene43752:CDS |
| GGATAACTATGGTGGAAAAG+TGG | 0.598964 | 5.1:-54011975 | MS.gene43752:CDS |
| AGCAACAGATAAAGGAACAA+TGG | 0.600831 | 5.1:+54013375 | None:intergenic |
| TCCGCCGAAAATGATGGCGG+AGG | 0.602078 | 5.1:+54013732 | None:intergenic |
| GATGGTTTCCTCAAACTGAA+CGG | 0.605328 | 5.1:-54011114 | MS.gene43752:CDS |
| AGCCATCACAACCCATGGAA+CGG | 0.607117 | 5.1:+54010277 | None:intergenic |
| AATTGGAGAGTACGGTGCGG+TGG | 0.607315 | 5.1:+54013674 | None:intergenic |
| AGGGAAGTCTCTGCAGCGAA+GGG | 0.607420 | 5.1:+54011905 | None:intergenic |
| AATAAAATCCAATTTCCCAA+TGG | 0.616338 | 5.1:-54013610 | MS.gene43752:CDS |
| TACACGATCAGCGTTACAGA+GGG | 0.616532 | 5.1:+54013411 | None:intergenic |
| TGAGTGGAAATTGGAGAGTA+CGG | 0.617043 | 5.1:+54013666 | None:intergenic |
| CGTTAGAAGAAACACGGAGG+CGG | 0.617351 | 5.1:+54013560 | None:intergenic |
| AGCCAAGCAGAAGCAACTGA+GGG | 0.619076 | 5.1:+54009480 | None:intergenic |
| CACTTCTGAACGAGTCAAAG+TGG | 0.620499 | 5.1:-54013458 | MS.gene43752:CDS |
| AAACCAATGAGGCTAACTCC+AGG | 0.622844 | 5.1:+54009519 | None:intergenic |
| AAAATCCAATTTCCCAATGG+CGG | 0.625987 | 5.1:-54013607 | MS.gene43752:CDS |
| ATATCATGTCGATCTCAGGC+AGG | 0.628168 | 5.1:-54010315 | MS.gene43752:CDS |
| TCTCCCATTCTCATGTCACA+AGG | 0.629633 | 5.1:-54011028 | MS.gene43752:CDS |
| GCTTGGTCTAGCTGAAGGTG+TGG | 0.629975 | 5.1:-54011855 | MS.gene43752:CDS |
| GTGATGAACTCAGTGAAACT+CGG | 0.632885 | 5.1:+54013478 | None:intergenic |
| TATCTGACCAAAAGCCAGCA+AGG | 0.634373 | 5.1:+54010243 | None:intergenic |
| TAATGTTGGTGGTTTAGCGG+CGG | 0.642538 | 5.1:+54013705 | None:intergenic |
| CAGCTAGACCAAGCAAAGCA+CGG | 0.644053 | 5.1:+54011864 | None:intergenic |
| ATGTTGGTGGATAACTATGG+TGG | 0.648049 | 5.1:-54011983 | MS.gene43752:CDS |
| TCTTCCTTGCATGAATAACA+TGG | 0.649489 | 5.1:-54011831 | MS.gene43752:CDS |
| TAGCCAAGCAGAAGCAACTG+AGG | 0.650053 | 5.1:+54009479 | None:intergenic |
| CTACACGATCAGCGTTACAG+AGG | 0.657415 | 5.1:+54013410 | None:intergenic |
| TACTTTCAAAGATGCCAACG+TGG | 0.663416 | 5.1:-54010808 | MS.gene43752:CDS |
| TTCTGAACGAGTCAAAGTGG+TGG | 0.680019 | 5.1:-54013455 | MS.gene43752:CDS |
| CCCATTCTCATGTCACAAGG+CGG | 0.684054 | 5.1:-54011025 | MS.gene43752:CDS |
| TGCTCCGCCGAAAATGATGG+CGG | 0.686657 | 5.1:+54013729 | None:intergenic |
| TCAGATATGATGATACAAAG+TGG | 0.691862 | 5.1:-54010227 | MS.gene43752:CDS |
| GAGAAATCCAGAGTGACCAA+AGG | 0.692248 | 5.1:+54009434 | None:intergenic |
| GCCAAGCAGAAGCAACTGAG+GGG | 0.703992 | 5.1:+54009481 | None:intergenic |
| TCCTTGCATGAATAACATGG+TGG | 0.712615 | 5.1:-54011828 | MS.gene43752:CDS |
| GAGCGTCGTTAGAAGAAACA+CGG | 0.715658 | 5.1:+54013554 | None:intergenic |
| GCAGCGATTAGAGACCACGT+TGG | 0.720715 | 5.1:+54010794 | None:intergenic |
| TGTATAACACCAGAATACTG+TGG | 0.748590 | 5.1:+54009299 | None:intergenic |
| GGAAATTGGAGAGTACGGTG+CGG | 0.767796 | 5.1:+54013671 | None:intergenic |
| CGTCGTTAGAAGAAACACGG+AGG | 0.813185 | 5.1:+54013557 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CCTTATTAAAAATAAAAAAA+AGG | + | chr5.1:54009383-54009402 | None:intergenic | 10.0% |
| !! | CTTCAAAAAAAAAAAAAAAA+AGG | - | chr5.1:54010453-54010472 | MS.gene43752:CDS | 10.0% |
| !! | TAAAGAATCTATTATATATA+GGG | - | chr5.1:54013156-54013175 | MS.gene43752:intron | 10.0% |
| !!! | CCTTTTTTTTATTTTTAATA+AGG | - | chr5.1:54009380-54009399 | MS.gene43752:intron | 10.0% |
| !! | AAAGAATCTATTATATATAG+GGG | - | chr5.1:54013157-54013176 | MS.gene43752:intron | 15.0% |
| !! | AAATACAAACTAAAACTTAA+AGG | - | chr5.1:54013333-54013352 | MS.gene43752:intron | 15.0% |
| !! | ATATATAATAGATTCTTTAG+AGG | + | chr5.1:54013155-54013174 | None:intergenic | 15.0% |
| !! | ATGAAAAATGAAGTTAAAAA+TGG | + | chr5.1:54011128-54011147 | None:intergenic | 15.0% |
| !! | CTAAAGAATCTATTATATAT+AGG | - | chr5.1:54013155-54013174 | MS.gene43752:intron | 15.0% |
| !!! | CATTTTTTAATTTGCAATTA+TGG | - | chr5.1:54008777-54008796 | MS.gene43752:intron | 15.0% |
| !!! | TAATTTTCTTAAGTTATGTT+CGG | - | chr5.1:54008555-54008574 | MS.gene43752:intron | 15.0% |
| !! | ATCATAAGAAATCTTAATCT+AGG | + | chr5.1:54012799-54012818 | None:intergenic | 20.0% |
| !! | GAAAAATTTGGAAGAAAAAT+GGG | + | chr5.1:54009143-54009162 | None:intergenic | 20.0% |
| !! | GAGTTGACTATTAAATTAAA+TGG | - | chr5.1:54012705-54012724 | MS.gene43752:intron | 20.0% |
| !! | GTACCAATTAAACAAATTAA+AGG | - | chr5.1:54009346-54009365 | MS.gene43752:intron | 20.0% |
| !! | TATAAATGAAATCCCATTAT+AGG | - | chr5.1:54011280-54011299 | MS.gene43752:intron | 20.0% |
| !! | TGAAAAATTTGGAAGAAAAA+TGG | + | chr5.1:54009144-54009163 | None:intergenic | 20.0% |
| !! | TGAATTTGCATGAATAATAA+TGG | + | chr5.1:54011096-54011115 | None:intergenic | 20.0% |
| !! | TGTTTAAAAAATGCTTTACA+CGG | - | chr5.1:54013645-54013664 | MS.gene43752:CDS | 20.0% |
| !! | TTAAGCAAAATGAAGAAAAT+AGG | - | chr5.1:54013362-54013381 | MS.gene43752:CDS | 20.0% |
| !! | TTAGCAATATATAAATGAAC+AGG | + | chr5.1:54013703-54013722 | None:intergenic | 20.0% |
| !! | TTGGCAAATTTAATTCAAAT+AGG | + | chr5.1:54012608-54012627 | None:intergenic | 20.0% |
| !!! | AAACTAAAACTTAAAGGTAT+AGG | - | chr5.1:54013339-54013358 | MS.gene43752:CDS | 20.0% |
| !!! | AAATGGAATTTTTTACTTCT+TGG | - | chr5.1:54012722-54012741 | MS.gene43752:intron | 20.0% |
| !!! | AACCCTAATTTTGATTTATA+CGG | + | chr5.1:54009018-54009037 | None:intergenic | 20.0% |
| !!! | AAGTTTTAAGTCTTTAGTTT+TGG | - | chr5.1:54011893-54011912 | MS.gene43752:CDS | 20.0% |
| !!! | ATATGACTAATATTTGAGTT+TGG | - | chr5.1:54010427-54010446 | MS.gene43752:intron | 20.0% |
| !!! | ATATTTTTCTATTCGAGAAA+TGG | + | chr5.1:54011024-54011043 | None:intergenic | 20.0% |
| !!! | TACAGATTTAAAGTTTGAAA+TGG | - | chr5.1:54010260-54010279 | MS.gene43752:CDS | 20.0% |
| !!! | TATTTTTCTATTCGAGAAAT+GGG | + | chr5.1:54011023-54011042 | None:intergenic | 20.0% |
| !!! | TCATTTGGTATTATTGATTA+GGG | - | chr5.1:54010008-54010027 | MS.gene43752:intron | 20.0% |
| !!! | TCATTTTTCATTATTTCACA+GGG | - | chr5.1:54011137-54011156 | MS.gene43752:intron | 20.0% |
| !!! | TGCACCTTTTTTTTAAATAA+GGG | + | chr5.1:54008869-54008888 | None:intergenic | 20.0% |
| !!! | TGTTCCCTTATTTAAAAAAA+AGG | - | chr5.1:54008862-54008881 | MS.gene43752:intron | 20.0% |
| !!! | TTATATTCATTTTTCATCAC+AGG | - | chr5.1:54012289-54012308 | MS.gene43752:intron | 20.0% |
| !!! | TTCATTTGGTATTATTGATT+AGG | - | chr5.1:54010007-54010026 | MS.gene43752:intron | 20.0% |
| !!! | TTCATTTTTCATTATTTCAC+AGG | - | chr5.1:54011136-54011155 | MS.gene43752:intron | 20.0% |
| !!! | TTTCAATATGGTTTTTGTTT+TGG | - | chr5.1:54010293-54010312 | MS.gene43752:CDS | 20.0% |
| ! | AAAAGGACATGACTAATATT+TGG | - | chr5.1:54010470-54010489 | MS.gene43752:intron | 25.0% |
| ! | AAAAGTAAATGTCACTCTAA+AGG | + | chr5.1:54013214-54013233 | None:intergenic | 25.0% |
| ! | AATAAAATCCAATTTCCCAA+TGG | - | chr5.1:54008009-54008028 | MS.gene43752:intron | 25.0% |
| ! | AATACAATAACAGTAACCAA+AGG | + | chr5.1:54010369-54010388 | None:intergenic | 25.0% |
| ! | AGCATATCGATAGAATAAAA+CGG | + | chr5.1:54013551-54013570 | None:intergenic | 25.0% |
| ! | ATACAATAACAGTAACCAAA+GGG | + | chr5.1:54010368-54010387 | None:intergenic | 25.0% |
| ! | ATCATATAAACATGCATACA+CGG | + | chr5.1:54013238-54013257 | None:intergenic | 25.0% |
| ! | CAAAAAACACTATAATTGCA+AGG | - | chr5.1:54009481-54009500 | MS.gene43752:CDS | 25.0% |
| ! | GAACACCAAAATAAAGATAA+CGG | + | chr5.1:54008838-54008857 | None:intergenic | 25.0% |
| ! | GAAGAATTTGGGAAAAAAAT+GGG | + | chr5.1:54009049-54009068 | None:intergenic | 25.0% |
| ! | GTTACAATGAACTCTAATTT+GGG | + | chr5.1:54009121-54009140 | None:intergenic | 25.0% |
| ! | GTTTAAAAAATGCTTTACAC+GGG | - | chr5.1:54013646-54013665 | MS.gene43752:CDS | 25.0% |
| ! | TCCCGTATAAATCAAAATTA+GGG | - | chr5.1:54009013-54009032 | MS.gene43752:intron | 25.0% |
| ! | TGAAGAATTTGGGAAAAAAA+TGG | + | chr5.1:54009050-54009069 | None:intergenic | 25.0% |
| ! | TTACAATGAACTCTAATTTG+GGG | + | chr5.1:54009120-54009139 | None:intergenic | 25.0% |
| ! | TTCCCGTATAAATCAAAATT+AGG | - | chr5.1:54009012-54009031 | MS.gene43752:intron | 25.0% |
| ! | TTTGTTGCAATCTCTAAATT+GGG | + | chr5.1:54009168-54009187 | None:intergenic | 25.0% |
| !! | AAAATGCTTAAACACCTTTT+TGG | - | chr5.1:54008811-54008830 | MS.gene43752:intron | 25.0% |
| !! | AATAAAAAAAAGGTGCAGAT+AGG | + | chr5.1:54009373-54009392 | None:intergenic | 25.0% |
| !! | AATTGGATTTTATTCGGAAA+TGG | + | chr5.1:54008003-54008022 | None:intergenic | 25.0% |
| !! | ATAAAGATAAGGTACCATAA+AGG | - | chr5.1:54009422-54009441 | MS.gene43752:CDS | 25.0% |
| !! | ATGGTACCTTATCTTTATTT+CGG | + | chr5.1:54009420-54009439 | None:intergenic | 25.0% |
| !! | ATTTGTTGCAATCTCTAAAT+TGG | + | chr5.1:54009169-54009188 | None:intergenic | 25.0% |
| !! | CATTTTTCATTATTTCACAG+GGG | - | chr5.1:54011138-54011157 | MS.gene43752:intron | 25.0% |
| !! | TAAAAGACAAACATCTTTTC+CGG | - | chr5.1:54010746-54010765 | MS.gene43752:intron | 25.0% |
| !! | TAATTTGGAGTGAAGAATTT+GGG | + | chr5.1:54009060-54009079 | None:intergenic | 25.0% |
| !! | TATATGTTTGGTCTAGAATT+TGG | - | chr5.1:54012524-54012543 | MS.gene43752:intron | 25.0% |
| !! | TCATGGAATTTTATGAAACT+GGG | - | chr5.1:54012665-54012684 | MS.gene43752:intron | 25.0% |
| !! | TTACTTGTAAATACTAGTCT+CGG | - | chr5.1:54013069-54013088 | MS.gene43752:intron | 25.0% |
| !! | TTATTGTTATTGTTGCATGA+TGG | - | chr5.1:54009541-54009560 | MS.gene43752:intron | 25.0% |
| !! | TTCATGGAATTTTATGAAAC+TGG | - | chr5.1:54012664-54012683 | MS.gene43752:intron | 25.0% |
| !! | TTGGGAAATTGGATTTTATT+CGG | + | chr5.1:54008009-54008028 | None:intergenic | 25.0% |
| !! | TTTAAAAAAAAGGTGCACAT+AGG | - | chr5.1:54008872-54008891 | MS.gene43752:intron | 25.0% |
| !! | TTTTGCAGAACATTTTTCAT+CGG | - | chr5.1:54012426-54012445 | MS.gene43752:intron | 25.0% |
| !!! | AATTTTTTACTTCTTGGTAG+TGG | - | chr5.1:54012728-54012747 | MS.gene43752:intron | 25.0% |
| !!! | ACCCTAATTTTGATTTATAC+GGG | + | chr5.1:54009017-54009036 | None:intergenic | 25.0% |
| !!! | ATTCAAGAATGTTGCTTTTA+TGG | - | chr5.1:54008457-54008476 | MS.gene43752:intron | 25.0% |
| !!! | ATTTTGATTTATACGGGAAT+TGG | + | chr5.1:54009011-54009030 | None:intergenic | 25.0% |
| !!! | ATTTTTTACTTCTTGGTAGT+GGG | - | chr5.1:54012729-54012748 | MS.gene43752:intron | 25.0% |
| !!! | CTTGCAATTATAGTGTTTTT+TGG | + | chr5.1:54009483-54009502 | None:intergenic | 25.0% |
| !!! | GGTCCTTTAATTTGTTTAAT+TGG | + | chr5.1:54009352-54009371 | None:intergenic | 25.0% |
| !!! | GTGCACCTTTTTTTTAAATA+AGG | + | chr5.1:54008870-54008889 | None:intergenic | 25.0% |
| !!! | TTTTTGAAATCGTTGAACAA+TGG | - | chr5.1:54009244-54009263 | MS.gene43752:intron | 25.0% |
| !!! | TTTTTTTCAACAAGACTGTT+TGG | + | chr5.1:54008653-54008672 | None:intergenic | 25.0% |
| AAAATTGAGAGCTTCTACAT+TGG | - | chr5.1:54012573-54012592 | MS.gene43752:intron | 30.0% | |
| AAAGCCAATAACAATAACAC+AGG | + | chr5.1:54008348-54008367 | None:intergenic | 30.0% | |
| AAATAGAGTAGGACAACATA+TGG | + | chr5.1:54013446-54013465 | None:intergenic | 30.0% | |
| AAATCTGGTAGCTATATGTT+TGG | - | chr5.1:54012512-54012531 | MS.gene43752:intron | 30.0% | |
| AAGCCAACAAAAAACTTACA+AGG | - | chr5.1:54009450-54009469 | MS.gene43752:CDS | 30.0% | |
| AATAGAGTAGGACAACATAT+GGG | + | chr5.1:54013445-54013464 | None:intergenic | 30.0% | |
| ACAAACCAAAAATCACAAAC+GGG | + | chr5.1:54010629-54010648 | None:intergenic | 30.0% | |
| ACAACCAAAATTTGAATACC+TGG | + | chr5.1:54009817-54009836 | None:intergenic | 30.0% | |
| ACACAGAGATAACATAATAC+AGG | + | chr5.1:54012475-54012494 | None:intergenic | 30.0% | |
| ACACATTGGAAAAAAATGAG+AGG | - | chr5.1:54011458-54011477 | MS.gene43752:intron | 30.0% | |
| AGGAGGTTTACAAGATAAAA+TGG | + | chr5.1:54012365-54012384 | None:intergenic | 30.0% | |
| ATAACACAGTGTATTCATCA+AGG | + | chr5.1:54009525-54009544 | None:intergenic | 30.0% | |
| ATAAGATAAGTGAATCCAGT+TGG | + | chr5.1:54010973-54010992 | None:intergenic | 30.0% | |
| ATATGAAATTTGATGTGTCC+TGG | + | chr5.1:54013478-54013497 | None:intergenic | 30.0% | |
| ATGTAAGCAACAAAAATCCT+CGG | + | chr5.1:54012931-54012950 | None:intergenic | 30.0% | |
| ATTTGGTTGTTCTGTATAGA+TGG | - | chr5.1:54010487-54010506 | MS.gene43752:intron | 30.0% | |
| CAAAGATACATAACTACTCA+AGG | + | chr5.1:54011643-54011662 | None:intergenic | 30.0% | |
| CAAAGCTTTACTCTAATAAG+TGG | + | chr5.1:54011956-54011975 | None:intergenic | 30.0% | |
| CAAGTGGTAAAAGATAAATC+TGG | - | chr5.1:54012497-54012516 | MS.gene43752:intron | 30.0% | |
| CACTTATTAGAGTAAAGCTT+TGG | - | chr5.1:54011954-54011973 | MS.gene43752:CDS | 30.0% | |
| CGACATGATATACCTATAAT+GGG | + | chr5.1:54011295-54011314 | None:intergenic | 30.0% | |
| CTAAATTGGGGTGAAAAATT+TGG | + | chr5.1:54009155-54009174 | None:intergenic | 30.0% | |
| GACAAACCAAAAATCACAAA+CGG | + | chr5.1:54010630-54010649 | None:intergenic | 30.0% | |
| GGTAACTAGAAGTTTCAATA+TGG | - | chr5.1:54010281-54010300 | MS.gene43752:CDS | 30.0% | |
| GGTTACAATGAACTCTAATT+TGG | + | chr5.1:54009122-54009141 | None:intergenic | 30.0% | |
| GTACCAATGAAACAAATTAC+AGG | + | chr5.1:54008899-54008918 | None:intergenic | 30.0% | |
| GTCTTTCCATGCATTATTAT+AGG | - | chr5.1:54009911-54009930 | MS.gene43752:intron | 30.0% | |
| GTTAAGGTTATGGAATATGT+TGG | - | chr5.1:54009978-54009997 | MS.gene43752:intron | 30.0% | |
| TAAGATAAGTGAATCCAGTT+GGG | + | chr5.1:54010972-54010991 | None:intergenic | 30.0% | |
| TCACTGTGTATTAGTTGTAA+TGG | - | chr5.1:54012030-54012049 | MS.gene43752:CDS | 30.0% | |
| TCAGATATCAAAATATGAGC+TGG | - | chr5.1:54010710-54010729 | MS.gene43752:intron | 30.0% | |
| TCAGATATGATGATACAAAG+TGG | - | chr5.1:54011392-54011411 | MS.gene43752:intron | 30.0% | |
| TCGACATGATATACCTATAA+TGG | + | chr5.1:54011296-54011315 | None:intergenic | 30.0% | |
| TCTCTAATTCTATGTACAGT+TGG | - | chr5.1:54013732-54013751 | MS.gene43752:CDS | 30.0% | |
| TGAATCCCGAAATAAAGATA+AGG | - | chr5.1:54009411-54009430 | MS.gene43752:intron | 30.0% | |
| TGTATTATGTTATCTCTGTG+TGG | - | chr5.1:54012474-54012493 | MS.gene43752:intron | 30.0% | |
| TTAAGAAAGATGAATGACGT+CGG | + | chr5.1:54011704-54011723 | None:intergenic | 30.0% | |
| TTCACAATTCCTCAAATCAA+GGG | + | chr5.1:54011501-54011520 | None:intergenic | 30.0% | |
| TTCTTAGTTCGACTTAATGT+AGG | + | chr5.1:54013516-54013535 | None:intergenic | 30.0% | |
| TTGTTGCAATCTCTAAATTG+GGG | + | chr5.1:54009167-54009186 | None:intergenic | 30.0% | |
| TTTCAAAAAGAAAGCTGATG+AGG | + | chr5.1:54009233-54009252 | None:intergenic | 30.0% | |
| TTTCACAATTCCTCAAATCA+AGG | + | chr5.1:54011502-54011521 | None:intergenic | 30.0% | |
| TTTGTGTATTCTAGCATTCT+TGG | - | chr5.1:54013093-54013112 | MS.gene43752:intron | 30.0% | |
| ! | ATTGCATTTATAGCGTGTTT+TGG | - | chr5.1:54008391-54008410 | MS.gene43752:intron | 30.0% |
| ! | ATTGCCTGTGTTATTGTTAT+TGG | - | chr5.1:54008341-54008360 | MS.gene43752:intron | 30.0% |
| ! | CAAATTTATCCCTTGATTTG+AGG | - | chr5.1:54011489-54011508 | MS.gene43752:intron | 30.0% |
| ! | CATGGAATTTTATGAAACTG+GGG | - | chr5.1:54012666-54012685 | MS.gene43752:intron | 30.0% |
| ! | CTAATTTGGAGTGAAGAATT+TGG | + | chr5.1:54009061-54009080 | None:intergenic | 30.0% |
| ! | CTGTTATTGTATTAAGTTGC+TGG | - | chr5.1:54010376-54010395 | MS.gene43752:intron | 30.0% |
| ! | CTTACTGAGTTGAAGTAAAT+GGG | + | chr5.1:54011188-54011207 | None:intergenic | 30.0% |
| ! | CTTTATTTCGGGATTCATAT+TGG | + | chr5.1:54009408-54009427 | None:intergenic | 30.0% |
| ! | CTTTCTTGATTTCTTGTTGT+AGG | - | chr5.1:54012824-54012843 | MS.gene43752:intron | 30.0% |
| ! | TAATTTGGGGTGAAGAATTT+GGG | + | chr5.1:54009107-54009126 | None:intergenic | 30.0% |
| ! | TAGAATAAAACGGAACGTTT+TGG | + | chr5.1:54013541-54013560 | None:intergenic | 30.0% |
| ! | TATTGGTTGCTTAAAGCAAT+GGG | - | chr5.1:54011818-54011837 | MS.gene43752:intron | 30.0% |
| ! | TATTTGATTTCACCTATAGG+TGG | - | chr5.1:54009609-54009628 | MS.gene43752:intron | 30.0% |
| ! | TGGTACCTTATCTTTATTTC+GGG | + | chr5.1:54009419-54009438 | None:intergenic | 30.0% |
| ! | TTGAGAAATTTAAAACCGCA+TGG | - | chr5.1:54013580-54013599 | MS.gene43752:CDS | 30.0% |
| ! | TTGATTTCTTGTTGTAGGAA+TGG | - | chr5.1:54012829-54012848 | MS.gene43752:intron | 30.0% |
| ! | TTTTATTCGGAAATGGTGAA+CGG | + | chr5.1:54007996-54008015 | None:intergenic | 30.0% |
| !! | AACTGTACAAAGAGTATCTT+TGG | - | chr5.1:54011595-54011614 | MS.gene43752:intron | 30.0% |
| !! | ACTGTACAAAGAGTATCTTT+GGG | - | chr5.1:54011596-54011615 | MS.gene43752:intron | 30.0% |
| !! | AGACATTTCTGGTACATATA+TGG | + | chr5.1:54010070-54010089 | None:intergenic | 30.0% |
| !! | AGAGTAAATTTTGATGATCC+TGG | - | chr5.1:54013004-54013023 | MS.gene43752:intron | 30.0% |
| !! | ATAAAGATAACGGACCAAAA+AGG | + | chr5.1:54008828-54008847 | None:intergenic | 30.0% |
| !! | ATTTTGATATCTGAGGACTT+CGG | + | chr5.1:54010704-54010723 | None:intergenic | 30.0% |
| !! | CCATGTGGTTTGATTTTATT+GGG | - | chr5.1:54008725-54008744 | MS.gene43752:CDS | 30.0% |
| !! | TATGTTGGCTTGATTTCATT+TGG | - | chr5.1:54009993-54010012 | MS.gene43752:intron | 30.0% |
| !! | TTAACGTTGTTAGTCTTTGA+TGG | + | chr5.1:54008940-54008959 | None:intergenic | 30.0% |
| !! | TTGGATAAACGTCTTATTTG+CGG | + | chr5.1:54008634-54008653 | None:intergenic | 30.0% |
| !! | TTGGTCCGTTATCTTTATTT+TGG | - | chr5.1:54008830-54008849 | MS.gene43752:intron | 30.0% |
| !!! | AGCTCATATTTTGATATCTG+AGG | + | chr5.1:54010711-54010730 | None:intergenic | 30.0% |
| !!! | AGTCCTTGTAAGTTTTTTGT+TGG | + | chr5.1:54009456-54009475 | None:intergenic | 30.0% |
| !!! | GGTTTTTTGTTGTTCTTTCT+TGG | - | chr5.1:54011159-54011178 | MS.gene43752:intron | 30.0% |
| !!! | TGGTTTTTGTTTTGGACATA+TGG | - | chr5.1:54010301-54010320 | MS.gene43752:CDS | 30.0% |
| !!! | TTATAGCGTGTTTTGGTTTT+AGG | - | chr5.1:54008398-54008417 | MS.gene43752:intron | 30.0% |
| !!! | TTGTGATTTTTGGTTTGTCT+GGG | - | chr5.1:54010631-54010650 | MS.gene43752:intron | 30.0% |
| !!! | TTTGTGATTTTTGGTTTGTC+TGG | - | chr5.1:54010630-54010649 | MS.gene43752:intron | 30.0% |
| AAAATCCAATTTCCCAATGG+CGG | - | chr5.1:54008012-54008031 | MS.gene43752:intron | 35.0% | |
| AAAGCCTCAAATTAAGGCTA+GGG | - | chr5.1:54010199-54010218 | MS.gene43752:CDS | 35.0% | |
| AAAGGGCAGCAAGAAAATAT+AGG | + | chr5.1:54012958-54012977 | None:intergenic | 35.0% | |
| AACATTCTTGAATTTGCAGG+GGG | + | chr5.1:54008450-54008469 | None:intergenic | 35.0% | |
| AACGTTAACTACAGTATACG+TGG | - | chr5.1:54008952-54008971 | MS.gene43752:intron | 35.0% | |
| AAGATAAGTGAATCCAGTTG+GGG | + | chr5.1:54010971-54010990 | None:intergenic | 35.0% | |
| ACATTAGATACAGTATCAGG+AGG | + | chr5.1:54012382-54012401 | None:intergenic | 35.0% | |
| ACCACATTAGATACAGTATC+AGG | + | chr5.1:54012385-54012404 | None:intergenic | 35.0% | |
| ACTCTATTTGTAAGATGTCC+AGG | - | chr5.1:54013457-54013476 | MS.gene43752:CDS | 35.0% | |
| ACTGTACATTTATACTCACC+AGG | + | chr5.1:54013025-54013044 | None:intergenic | 35.0% | |
| AGAGTATAGGCAGTAGAAAA+GGG | + | chr5.1:54012975-54012994 | None:intergenic | 35.0% | |
| AGCAACAGATAAAGGAACAA+TGG | + | chr5.1:54008247-54008266 | None:intergenic | 35.0% | |
| AGCAACATTCTTGAATTTGC+AGG | + | chr5.1:54008453-54008472 | None:intergenic | 35.0% | |
| ATAGAGTAGGACAACATATG+GGG | + | chr5.1:54013444-54013463 | None:intergenic | 35.0% | |
| ATTCGAGAAATGGGAATAGA+AGG | + | chr5.1:54011014-54011033 | None:intergenic | 35.0% | |
| ATTGTCGCTGATGTTGTAAT+TGG | - | chr5.1:54010901-54010920 | MS.gene43752:CDS | 35.0% | |
| ATTTGACATGTTAGCGCAAA+TGG | + | chr5.1:54009200-54009219 | None:intergenic | 35.0% | |
| CAACATTCTTGAATTTGCAG+GGG | + | chr5.1:54008451-54008470 | None:intergenic | 35.0% | |
| CAACCATTAGCAACAGATAA+AGG | + | chr5.1:54008255-54008274 | None:intergenic | 35.0% | |
| CACTCCAAATTAGAGTTCAT+TGG | - | chr5.1:54009068-54009087 | MS.gene43752:intron | 35.0% | |
| CAGTCTCACAAAACTTATGT+CGG | + | chr5.1:54008515-54008534 | None:intergenic | 35.0% | |
| CATATTCCATAACCTTAACC+CGG | + | chr5.1:54009977-54009996 | None:intergenic | 35.0% | |
| CCATTTACTTCAACTCAGTA+AGG | - | chr5.1:54011186-54011205 | MS.gene43752:intron | 35.0% | |
| CCCAATAAAATCAAACCACA+TGG | + | chr5.1:54008728-54008747 | None:intergenic | 35.0% | |
| CGCTATAAATGCAATTTGCA+AGG | + | chr5.1:54008386-54008405 | None:intergenic | 35.0% | |
| CTTAATCTAGGTAGAAAGAC+AGG | + | chr5.1:54012787-54012806 | None:intergenic | 35.0% | |
| CTTTATCTGTTGCTAATGGT+TGG | - | chr5.1:54008253-54008272 | MS.gene43752:intron | 35.0% | |
| GATACATAACTACTCAAGGT+TGG | + | chr5.1:54011639-54011658 | None:intergenic | 35.0% | |
| GCAACATTCTTGAATTTGCA+GGG | + | chr5.1:54008452-54008471 | None:intergenic | 35.0% | |
| GGACATCTTACAAATAGAGT+AGG | + | chr5.1:54013457-54013476 | None:intergenic | 35.0% | |
| GGTTCCAATGAACTCTAATT+TGG | + | chr5.1:54009075-54009094 | None:intergenic | 35.0% | |
| GTTCCTTTATCTGTTGCTAA+TGG | - | chr5.1:54008249-54008268 | MS.gene43752:intron | 35.0% | |
| TAGAGTATAGGCAGTAGAAA+AGG | + | chr5.1:54012976-54012995 | None:intergenic | 35.0% | |
| TATACGGGAATTGGTAAACT+GGG | + | chr5.1:54009002-54009021 | None:intergenic | 35.0% | |
| TCAAATTAAGGCTAGGGTTT+AGG | - | chr5.1:54010205-54010224 | MS.gene43752:CDS | 35.0% | |
| TCAATATACAACATGCCCTT+TGG | - | chr5.1:54010350-54010369 | MS.gene43752:intron | 35.0% | |
| TCCTGATACTGTATCTAATG+TGG | - | chr5.1:54012381-54012400 | MS.gene43752:intron | 35.0% | |
| TCTTCCTTGCATGAATAACA+TGG | - | chr5.1:54009788-54009807 | MS.gene43752:intron | 35.0% | |
| TGAAGAATTTGGGGGAAAAA+CGG | + | chr5.1:54009097-54009116 | None:intergenic | 35.0% | |
| TGCTTAAAGCAATGGGAATT+AGG | - | chr5.1:54011825-54011844 | MS.gene43752:CDS | 35.0% | |
| TGTATAACACCAGAATACTG+TGG | + | chr5.1:54012323-54012342 | None:intergenic | 35.0% | |
| TTAATCCCTTGACTTAGTTC+CGG | - | chr5.1:54010099-54010118 | MS.gene43752:intron | 35.0% | |
| TTATACGGGAATTGGTAAAC+TGG | + | chr5.1:54009003-54009022 | None:intergenic | 35.0% | |
| TTCAAAACCACGAATTTGCA+TGG | - | chr5.1:54009309-54009328 | MS.gene43752:CDS | 35.0% | |
| TTCACTTATCTTATTGCACG+AGG | - | chr5.1:54010979-54010998 | MS.gene43752:CDS | 35.0% | |
| TTTATTCGGAAATGGTGAAC+GGG | + | chr5.1:54007995-54008014 | None:intergenic | 35.0% | |
| TTTGAAAGTAAGCGTCTGAA+AGG | + | chr5.1:54010801-54010820 | None:intergenic | 35.0% | |
| TTTGACATGTTAGCGCAAAT+GGG | + | chr5.1:54009199-54009218 | None:intergenic | 35.0% | |
| TTTGACCAATGACATGAGTA+GGG | - | chr5.1:54009849-54009868 | MS.gene43752:intron | 35.0% | |
| ! | AATTTGGGGTGAAGAATTTG+GGG | + | chr5.1:54009106-54009125 | None:intergenic | 35.0% |
| ! | ACAAACTAAACACTAGCTTG+TGG | + | chr5.1:54009893-54009912 | None:intergenic | 35.0% |
| ! | AGAAATTTAAAACCGCATGG+TGG | - | chr5.1:54013583-54013602 | MS.gene43752:CDS | 35.0% |
| ! | CCTTACTGAGTTGAAGTAAA+TGG | + | chr5.1:54011189-54011208 | None:intergenic | 35.0% |
| ! | CTAATTTGGGGTGAAGAATT+TGG | + | chr5.1:54009108-54009127 | None:intergenic | 35.0% |
| ! | CTATTGGTTGCTTAAAGCAA+TGG | - | chr5.1:54011817-54011836 | MS.gene43752:intron | 35.0% |
| ! | GGGTATTTGATTTCACCTAT+AGG | - | chr5.1:54009606-54009625 | MS.gene43752:intron | 35.0% |
| ! | GTAGTGGGATGTATAACTAT+GGG | - | chr5.1:54012744-54012763 | MS.gene43752:intron | 35.0% |
| ! | TTAGTCTTTGATGGATGGAA+AGG | + | chr5.1:54008931-54008950 | None:intergenic | 35.0% |
| ! | TTTGGGAGAATTTGAGATAG+AGG | - | chr5.1:54011613-54011632 | MS.gene43752:intron | 35.0% |
| !! | ATTGACTCGTAAGATTATGC+AGG | - | chr5.1:54011427-54011446 | MS.gene43752:intron | 35.0% |
| !! | CAGTATTCTGGTGTTATACA+TGG | - | chr5.1:54012323-54012342 | MS.gene43752:intron | 35.0% |
| !! | GCCATGTGGTTTGATTTTAT+TGG | - | chr5.1:54008724-54008743 | MS.gene43752:CDS | 35.0% |
| !! | GGTCCTGTAATTTGTTTCAT+TGG | - | chr5.1:54008893-54008912 | MS.gene43752:intron | 35.0% |
| !! | GGTTTTCGTGGTTTTTGATT+TGG | - | chr5.1:54009562-54009581 | MS.gene43752:intron | 35.0% |
| !! | TAAACCCTAGCCTTAATTTG+AGG | + | chr5.1:54010206-54010225 | None:intergenic | 35.0% |
| !! | TGTTGGCTTAAAGACCTTTA+TGG | + | chr5.1:54009439-54009458 | None:intergenic | 35.0% |
| !!! | GGATTTTTTGTTGAGCTAGT+TGG | - | chr5.1:54012899-54012918 | MS.gene43752:intron | 35.0% |
| AAAGTAAGCGTCTGAAAGGA+GGG | + | chr5.1:54010797-54010816 | None:intergenic | 40.0% | |
| AAATCACTCGCAGACATTTC+TGG | + | chr5.1:54010081-54010100 | None:intergenic | 40.0% | |
| AACCACGAATTTGCATGGAA+AGG | - | chr5.1:54009314-54009333 | MS.gene43752:intron | 40.0% | |
| AATTAAGGCTAGGGTTTAGG+CGG | - | chr5.1:54010208-54010227 | MS.gene43752:CDS | 40.0% | |
| AGATCCATGCGAATTTGTGT+TGG | + | chr5.1:54009284-54009303 | None:intergenic | 40.0% | |
| AGGTATATCATGTCGATCTC+AGG | - | chr5.1:54011300-54011319 | MS.gene43752:intron | 40.0% | |
| ATAATTGGAACAGTTGGAGC+TGG | - | chr5.1:54012878-54012897 | MS.gene43752:intron | 40.0% | |
| ATCGTTGAACAATGGTGCAA+AGG | - | chr5.1:54009252-54009271 | MS.gene43752:intron | 40.0% | |
| ATGGATGGAAAGGACTAATG+TGG | + | chr5.1:54008921-54008940 | None:intergenic | 40.0% | |
| ATGGTTTCCTCAAACTGAAC+GGG | - | chr5.1:54010506-54010525 | MS.gene43752:intron | 40.0% | |
| ATGTCACAAGGCGGTATATT+TGG | - | chr5.1:54010603-54010622 | MS.gene43752:intron | 40.0% | |
| ATGTTTCTTAAATGCGACGC+AGG | - | chr5.1:54011049-54011068 | MS.gene43752:CDS | 40.0% | |
| CAAAGCCTCAAATTAAGGCT+AGG | - | chr5.1:54010198-54010217 | MS.gene43752:CDS | 40.0% | |
| CAGGCAATTCATCAAACAGT+TGG | + | chr5.1:54008329-54008348 | None:intergenic | 40.0% | |
| CGGATATATCTTGGACAGTA+TGG | - | chr5.1:54010228-54010247 | MS.gene43752:CDS | 40.0% | |
| CTAGAGTGATTATGGATCGT+CGG | + | chr5.1:54010153-54010172 | None:intergenic | 40.0% | |
| GAAGAATTTGGGGGAAAAAC+GGG | + | chr5.1:54009096-54009115 | None:intergenic | 40.0% | |
| GACGACAAGTAAAGCCAATA+GGG | + | chr5.1:54009736-54009755 | None:intergenic | 40.0% | |
| GACTTAATGTAGGTAGTGCT+TGG | + | chr5.1:54013506-54013525 | None:intergenic | 40.0% | |
| GAGCTCAAAGCCTCAAATTA+AGG | - | chr5.1:54010193-54010212 | MS.gene43752:CDS | 40.0% | |
| GATGGTTTCCTCAAACTGAA+CGG | - | chr5.1:54010505-54010524 | MS.gene43752:intron | 40.0% | |
| GCAGCACCTATAATAATGCA+TGG | + | chr5.1:54009920-54009939 | None:intergenic | 40.0% | |
| GCTAACATGTCAAATTCACG+AGG | - | chr5.1:54009205-54009224 | MS.gene43752:intron | 40.0% | |
| GCTGCTATAATTGGAACAGT+TGG | - | chr5.1:54012872-54012891 | MS.gene43752:intron | 40.0% | |
| GCTTAGAGCTAGAGTGATTA+TGG | + | chr5.1:54010161-54010180 | None:intergenic | 40.0% | |
| GTGATGAACTCAGTGAAACT+CGG | + | chr5.1:54008144-54008163 | None:intergenic | 40.0% | |
| GTTTGACCAATGACATGAGT+AGG | - | chr5.1:54009848-54009867 | MS.gene43752:intron | 40.0% | |
| TACTTTCAAAGATGCCAACG+TGG | - | chr5.1:54010811-54010830 | MS.gene43752:CDS | 40.0% | |
| TCCTTGCATGAATAACATGG+TGG | - | chr5.1:54009791-54009810 | MS.gene43752:intron | 40.0% | |
| TCGTTGAACAATGGTGCAAA+GGG | - | chr5.1:54009253-54009272 | MS.gene43752:intron | 40.0% | |
| TGAGTGGAAATTGGAGAGTA+CGG | + | chr5.1:54007956-54007975 | None:intergenic | 40.0% | |
| TGCAGGTATGTTACACACAT+TGG | - | chr5.1:54011444-54011463 | MS.gene43752:intron | 40.0% | |
| TGGATTTCTCGTGAACTTTC+AGG | - | chr5.1:54012198-54012217 | MS.gene43752:intron | 40.0% | |
| TGTTTCTTAAATGCGACGCA+GGG | - | chr5.1:54011050-54011069 | MS.gene43752:CDS | 40.0% | |
| TTAACTTTCTTTGCCTCCAC+CGG | + | chr5.1:54010768-54010787 | None:intergenic | 40.0% | |
| TTAATGCCGGGTTAAGGTTA+TGG | - | chr5.1:54009968-54009987 | MS.gene43752:intron | 40.0% | |
| TTCTACTGCCTATACTCTAC+AGG | - | chr5.1:54012977-54012996 | MS.gene43752:intron | 40.0% | |
| TTGACATGTTAGCGCAAATG+GGG | + | chr5.1:54009198-54009217 | None:intergenic | 40.0% | |
| TTGATTTCACCTATAGGTGG+AGG | - | chr5.1:54009612-54009631 | MS.gene43752:intron | 40.0% | |
| TTGCAGTTGCTAAACCAATG+AGG | + | chr5.1:54012114-54012133 | None:intergenic | 40.0% | |
| TTGGGCTACGTATGATGTAA+CGG | - | chr5.1:54008743-54008762 | MS.gene43752:CDS | 40.0% | |
| ! | AAGACAAACATCTTTTCCGG+TGG | - | chr5.1:54010749-54010768 | MS.gene43752:intron | 40.0% |
| ! | ATGCAGTCTTCTTTTCTGTG+GGG | - | chr5.1:54009585-54009604 | MS.gene43752:intron | 40.0% |
| ! | ATGTTGGTGGATAACTATGG+TGG | - | chr5.1:54009636-54009655 | MS.gene43752:intron | 40.0% |
| ! | ATTTGGGGTGAAGAATTTGG+GGG | + | chr5.1:54009105-54009124 | None:intergenic | 40.0% |
| ! | CTATGGTGGAAAAGTGGTAA+TGG | - | chr5.1:54009650-54009669 | MS.gene43752:intron | 40.0% |
| ! | GATGCAGTCTTCTTTTCTGT+GGG | - | chr5.1:54009584-54009603 | MS.gene43752:intron | 40.0% |
| ! | GCTTCAGTTTTCTCTGCTAT+TGG | - | chr5.1:54011801-54011820 | MS.gene43752:intron | 40.0% |
| ! | GGAACACTTGCTGCTATAAT+TGG | - | chr5.1:54012863-54012882 | MS.gene43752:intron | 40.0% |
| ! | GGAATGTTGGTGGATAACTA+TGG | - | chr5.1:54009633-54009652 | MS.gene43752:intron | 40.0% |
| ! | GGATAACTATGGTGGAAAAG+TGG | - | chr5.1:54009644-54009663 | MS.gene43752:intron | 40.0% |
| ! | GTGGCCAGGTATTCAAATTT+TGG | - | chr5.1:54009810-54009829 | MS.gene43752:intron | 40.0% |
| ! | GTTGAAGCTGTTGTTGTTGT+TGG | + | chr5.1:54008122-54008141 | None:intergenic | 40.0% |
| ! | TGGTTTGTCTGGGTTTCTTT+GGG | - | chr5.1:54010641-54010660 | MS.gene43752:intron | 40.0% |
| ! | TTAAGTTGCTGGAGCAAGAA+CGG | - | chr5.1:54010387-54010406 | MS.gene43752:intron | 40.0% |
| ! | TTGTTGCATGATGGTTTTCG+TGG | - | chr5.1:54009550-54009569 | MS.gene43752:intron | 40.0% |
| ! | TTTGGCCCGTTTGTGATTTT+TGG | - | chr5.1:54010621-54010640 | MS.gene43752:intron | 40.0% |
| !! | CGTTGTTAGTCTTTGATGGA+TGG | + | chr5.1:54008936-54008955 | None:intergenic | 40.0% |
| !! | GGTAGTGGGATGTATAACTA+TGG | - | chr5.1:54012743-54012762 | MS.gene43752:intron | 40.0% |
| !! | TGGAAAAGTGGTAATGGCTT+GGG | - | chr5.1:54009656-54009675 | MS.gene43752:intron | 40.0% |
| !! | TTGGTTTGTCTGGGTTTCTT+TGG | - | chr5.1:54010640-54010659 | MS.gene43752:intron | 40.0% |
| !!! | CATTCTTGGTGTTTTGCGAA+AGG | - | chr5.1:54013107-54013126 | MS.gene43752:intron | 40.0% |
| !!! | TGGTTTTTGGGTAATGTTGG+TGG | + | chr5.1:54007928-54007947 | None:intergenic | 40.0% |
| !!! | TTGTTGGTGGTGGTTGTTTT+CGG | + | chr5.1:54008106-54008125 | None:intergenic | 40.0% |
| AAACCAATGAGGCTAACTCC+AGG | + | chr5.1:54012103-54012122 | None:intergenic | 45.0% | |
| AAATTTGCCAAGCTGTGCCA+TGG | - | chr5.1:54012617-54012636 | MS.gene43752:intron | 45.0% | |
| AACCAAGTGCTCTCGTGTTT+CGG | + | chr5.1:54011856-54011875 | None:intergenic | 45.0% | |
| AAGCATTACCCAGCTATGCA+TGG | + | chr5.1:54010856-54010875 | None:intergenic | 45.0% | |
| AAGCTGACGTCAAGGACTAA+GGG | + | chr5.1:54008699-54008718 | None:intergenic | 45.0% | |
| AAGGGCTGTTGGAATTTCGA+TGG | - | chr5.1:54010530-54010549 | MS.gene43752:intron | 45.0% | |
| ACCAACATTCCTCCACCTAT+AGG | + | chr5.1:54009624-54009643 | None:intergenic | 45.0% | |
| ACCTATAGGTGGAGGAATGT+TGG | - | chr5.1:54009620-54009639 | MS.gene43752:intron | 45.0% | |
| ACCTTAACCCGGCATTAATG+AGG | + | chr5.1:54009966-54009985 | None:intergenic | 45.0% | |
| ATATCATGTCGATCTCAGGC+AGG | - | chr5.1:54011304-54011323 | MS.gene43752:intron | 45.0% | |
| ATGATAGCCATCACAACCCA+TGG | + | chr5.1:54011350-54011369 | None:intergenic | 45.0% | |
| CACTTCTGAACGAGTCAAAG+TGG | - | chr5.1:54008161-54008180 | MS.gene43752:intron | 45.0% | |
| CGAAACCCTACTCATGTCAT+TGG | + | chr5.1:54009857-54009876 | None:intergenic | 45.0% | |
| CTCTCTCTCCTGTAGAGTAT+AGG | + | chr5.1:54012988-54013007 | None:intergenic | 45.0% | |
| CTGGGGCTAATACAACACTT+AGG | - | chr5.1:54012683-54012702 | MS.gene43752:intron | 45.0% | |
| CTTTGAGCTCTTTCGCCTAA+TGG | + | chr5.1:54010183-54010202 | None:intergenic | 45.0% | |
| GAAAGTAAGCGTCTGAAAGG+AGG | + | chr5.1:54010798-54010817 | None:intergenic | 45.0% | |
| GAACGGGTGAAGTTGAGTTT+GGG | + | chr5.1:54007979-54007998 | None:intergenic | 45.0% | |
| GAATTGGTAAACTGGGTAGG+AGG | + | chr5.1:54008995-54009014 | None:intergenic | 45.0% | |
| GAGAAATCCAGAGTGACCAA+AGG | + | chr5.1:54012188-54012207 | None:intergenic | 45.0% | |
| GAGTTTGGGTGAGTGGAAAT+TGG | + | chr5.1:54007965-54007984 | None:intergenic | 45.0% | |
| GCATCCAACACAAATTCGCA+TGG | - | chr5.1:54009277-54009296 | MS.gene43752:intron | 45.0% | |
| GCCACCATGTTATTCATGCA+AGG | + | chr5.1:54009795-54009814 | None:intergenic | 45.0% | |
| GCTATCATGAACTACCTTGC+TGG | - | chr5.1:54011362-54011381 | MS.gene43752:intron | 45.0% | |
| GGACGACAAGTAAAGCCAAT+AGG | + | chr5.1:54009737-54009756 | None:intergenic | 45.0% | |
| GGGTTTAGGCGGATATATCT+TGG | - | chr5.1:54010219-54010238 | MS.gene43752:CDS | 45.0% | |
| GTAGGAATGGCAAATACTGC+TGG | - | chr5.1:54012842-54012861 | MS.gene43752:intron | 45.0% | |
| GTCCTTTCCATGCAAATTCG+TGG | + | chr5.1:54009319-54009338 | None:intergenic | 45.0% | |
| TAAGCTGACGTCAAGGACTA+AGG | + | chr5.1:54008700-54008719 | None:intergenic | 45.0% | |
| TACACGATCAGCGTTACAGA+GGG | + | chr5.1:54008211-54008230 | None:intergenic | 45.0% | |
| TATAGGTGGAGGAATGTTGG+TGG | - | chr5.1:54009623-54009642 | MS.gene43752:intron | 45.0% | |
| TATCTGACCAAAAGCCAGCA+AGG | + | chr5.1:54011379-54011398 | None:intergenic | 45.0% | |
| TCAAGGACTAAGGGTCTGTT+TGG | + | chr5.1:54008690-54008709 | None:intergenic | 45.0% | |
| TCCAGGACCAACAAAACCAA+TGG | + | chr5.1:54012086-54012105 | None:intergenic | 45.0% | |
| TCCAGTTGGGGCATAACAAA+TGG | + | chr5.1:54010959-54010978 | None:intergenic | 45.0% | |
| TCTCCCATTCTCATGTCACA+AGG | - | chr5.1:54010591-54010610 | MS.gene43752:intron | 45.0% | |
| TGAACGGGTGAAGTTGAGTT+TGG | + | chr5.1:54007980-54007999 | None:intergenic | 45.0% | |
| TGAAGTTGAGTTTGGGTGAG+TGG | + | chr5.1:54007972-54007991 | None:intergenic | 45.0% | |
| TGTGTGTGTAAACCACCATG+CGG | + | chr5.1:54013598-54013617 | None:intergenic | 45.0% | |
| TGTTATCTCTGTGTGGCAAG+TGG | - | chr5.1:54012481-54012500 | MS.gene43752:intron | 45.0% | |
| TTAGTTCCCGCACTAGCAAA+TGG | + | chr5.1:54012555-54012574 | None:intergenic | 45.0% | |
| TTCAGCTTGGATGTGCGATA+GGG | - | chr5.1:54010559-54010578 | MS.gene43752:intron | 45.0% | |
| TTCTGAACGAGTCAAAGTGG+TGG | - | chr5.1:54008164-54008183 | MS.gene43752:intron | 45.0% | |
| TTGCATGGAAAGGACTAACG+TGG | - | chr5.1:54009324-54009343 | MS.gene43752:intron | 45.0% | |
| TTTCAGCTTGGATGTGCGAT+AGG | - | chr5.1:54010558-54010577 | MS.gene43752:intron | 45.0% | |
| ! | ACAAACATCTTTTCCGGTGG+AGG | - | chr5.1:54010752-54010771 | MS.gene43752:intron | 45.0% |
| ! | ATGTCCTCCGCCATCATTTT+CGG | - | chr5.1:54007883-54007902 | MS.gene43752:intron | 45.0% |
| ! | ATTCCATGAACGTTTTCGCC+AGG | + | chr5.1:54012654-54012673 | None:intergenic | 45.0% |
| ! | GAAGCTGTTGTTGTTGTTGG+TGG | + | chr5.1:54008119-54008138 | None:intergenic | 45.0% |
| ! | GAGCGTCGTTAGAAGAAACA+CGG | + | chr5.1:54008068-54008087 | None:intergenic | 45.0% |
| ! | GGATGCAGTCTTCTTTTCTG+TGG | - | chr5.1:54009583-54009602 | MS.gene43752:intron | 45.0% |
| ! | GGTAGTTCCATTTGCTAGTG+CGG | - | chr5.1:54012545-54012564 | MS.gene43752:intron | 45.0% |
| ! | GTAGTTCCATTTGCTAGTGC+GGG | - | chr5.1:54012546-54012565 | MS.gene43752:intron | 45.0% |
| ! | TGCAGTCTTCTTTTCTGTGG+GGG | - | chr5.1:54009586-54009605 | MS.gene43752:intron | 45.0% |
| ! | TTGGTTTAGTGCCGTTCCAT+GGG | - | chr5.1:54011331-54011350 | MS.gene43752:intron | 45.0% |
| !! | CACTCTAGCTCTAAGCCATT+AGG | - | chr5.1:54010165-54010184 | MS.gene43752:intron | 45.0% |
| !! | CGCTTTCTCTGGAATTGTTC+AGG | - | chr5.1:54008281-54008300 | MS.gene43752:intron | 45.0% |
| !! | GCTTGGCTAACATTAGCCTT+TGG | - | chr5.1:54012154-54012173 | MS.gene43752:intron | 45.0% |
| !! | GGAAAAGTGGTAATGGCTTG+GGG | - | chr5.1:54009657-54009676 | MS.gene43752:intron | 45.0% |
| !! | GGGTAATGTTGGTGGTTTAG+CGG | + | chr5.1:54007920-54007939 | None:intergenic | 45.0% |
| !! | GTGGAAAAGTGGTAATGGCT+TGG | - | chr5.1:54009655-54009674 | MS.gene43752:intron | 45.0% |
| !! | TAATGTTGGTGGTTTAGCGG+CGG | + | chr5.1:54007917-54007936 | None:intergenic | 45.0% |
| !!! | CGGTGGTTTTTGGGTAATGT+TGG | + | chr5.1:54007931-54007950 | None:intergenic | 45.0% |
| !!! | CTGCAGTCCATTGGTTTTGT+TGG | - | chr5.1:54012076-54012095 | MS.gene43752:intron | 45.0% |
| !!! | TCCATTGGTTTTGTTGGTCC+TGG | - | chr5.1:54012082-54012101 | MS.gene43752:intron | 45.0% |
| !!! | TGAACTACCTTGCTGGCTTT+TGG | - | chr5.1:54011369-54011388 | MS.gene43752:intron | 45.0% |
| !!! | TGTTGGTGGTGGTTGTTTTC+GGG | + | chr5.1:54008105-54008124 | None:intergenic | 45.0% |
| !!! | CTTTTTTTTATTTTTAATAA+GGG | - | chr5.1:54009381-54009400 | MS.gene43752:intron | 5.0% |
| AACCAGCCGGAACTAAGTCA+AGG | + | chr5.1:54010108-54010127 | None:intergenic | 50.0% | |
| ACACCTGGCGAAAACGTTCA+TGG | - | chr5.1:54012648-54012667 | MS.gene43752:intron | 50.0% | |
| ACCAGCCGGAACTAAGTCAA+GGG | + | chr5.1:54010107-54010126 | None:intergenic | 50.0% | |
| ACCGCCTTGTGACATGAGAA+TGG | + | chr5.1:54010598-54010617 | None:intergenic | 50.0% | |
| AGCCAAGCAGAAGCAACTGA+GGG | + | chr5.1:54012142-54012161 | None:intergenic | 50.0% | |
| AGCCATCACAACCCATGGAA+CGG | + | chr5.1:54011345-54011364 | None:intergenic | 50.0% | |
| ATGCGAGCCTCATTAATGCC+GGG | - | chr5.1:54009956-54009975 | MS.gene43752:intron | 50.0% | |
| ATGTCGAACACACAACCAGC+CGG | + | chr5.1:54010121-54010140 | None:intergenic | 50.0% | |
| CAGCTAGACCAAGCAAAGCA+CGG | + | chr5.1:54009758-54009777 | None:intergenic | 50.0% | |
| CCCATTCTCATGTCACAAGG+CGG | - | chr5.1:54010594-54010613 | MS.gene43752:intron | 50.0% | |
| CCGCCTTGTGACATGAGAAT+GGG | + | chr5.1:54010597-54010616 | None:intergenic | 50.0% | |
| CGGGAATTGGTAAACTGGGT+AGG | + | chr5.1:54008998-54009017 | None:intergenic | 50.0% | |
| CGTCAGCTTATTGAGCCATG+TGG | - | chr5.1:54008710-54008729 | MS.gene43752:CDS | 50.0% | |
| CGTCGTTAGAAGAAACACGG+AGG | + | chr5.1:54008065-54008084 | None:intergenic | 50.0% | |
| CGTTAGAAGAAACACGGAGG+CGG | + | chr5.1:54008062-54008081 | None:intergenic | 50.0% | |
| CTACACGATCAGCGTTACAG+AGG | + | chr5.1:54008212-54008231 | None:intergenic | 50.0% | |
| GAGATCGCACCACAGTATTC+TGG | - | chr5.1:54012311-54012330 | MS.gene43752:intron | 50.0% | |
| GATATCTGAGGACTTCGGTC+AGG | + | chr5.1:54010699-54010718 | None:intergenic | 50.0% | |
| GATGCGAGCCTCATTAATGC+CGG | - | chr5.1:54009955-54009974 | MS.gene43752:intron | 50.0% | |
| GCATGAATAACATGGTGGCC+AGG | - | chr5.1:54009796-54009815 | MS.gene43752:intron | 50.0% | |
| GCCAGGTGTTTATACCACCA+TGG | + | chr5.1:54012637-54012656 | None:intergenic | 50.0% | |
| GCCATGGTGGTATAAACACC+TGG | - | chr5.1:54012633-54012652 | MS.gene43752:intron | 50.0% | |
| GCCTCATTAATGCCGGGTTA+AGG | - | chr5.1:54009962-54009981 | MS.gene43752:intron | 50.0% | |
| GCTCATTCACTGCAGTCCAT+TGG | - | chr5.1:54012067-54012086 | MS.gene43752:intron | 50.0% | |
| GCTGTTGGAATTTCGATGGC+TGG | - | chr5.1:54010534-54010553 | MS.gene43752:intron | 50.0% | |
| GCTTTGCTTGGTCTAGCTGA+AGG | - | chr5.1:54009759-54009778 | MS.gene43752:intron | 50.0% | |
| GGCTCAATAAGCTGACGTCA+AGG | + | chr5.1:54008707-54008726 | None:intergenic | 50.0% | |
| GTCTGGGTTTCTTTGGGTGT+TGG | - | chr5.1:54010647-54010666 | MS.gene43752:intron | 50.0% | |
| TAGCCAAGCAGAAGCAACTG+AGG | + | chr5.1:54012143-54012162 | None:intergenic | 50.0% | |
| TATACCACCATGGCACAGCT+TGG | + | chr5.1:54012627-54012646 | None:intergenic | 50.0% | |
| TCCTCAAACTGAACGGGCAA+GGG | - | chr5.1:54010512-54010531 | MS.gene43752:intron | 50.0% | |
| TCGATGGCTGGATTTCAGCT+TGG | - | chr5.1:54010546-54010565 | MS.gene43752:intron | 50.0% | |
| TGCAAACGCCATGCATAGCT+GGG | - | chr5.1:54010845-54010864 | MS.gene43752:CDS | 50.0% | |
| TTCCTCAAACTGAACGGGCA+AGG | - | chr5.1:54010511-54010530 | MS.gene43752:intron | 50.0% | |
| ! | AGTACGGTGCGGTGGTTTTT+GGG | + | chr5.1:54007940-54007959 | None:intergenic | 50.0% |
| ! | CTTGGTTTAGTGCCGTTCCA+TGG | - | chr5.1:54011330-54011349 | MS.gene43752:intron | 50.0% |
| ! | GAGCTAGTTGGTTCATTCCG+AGG | - | chr5.1:54012911-54012930 | MS.gene43752:intron | 50.0% |
| ! | GCTGTTGTTGTTGTTGGTGG+TGG | + | chr5.1:54008116-54008135 | None:intergenic | 50.0% |
| ! | GGAAATTGGAGAGTACGGTG+CGG | + | chr5.1:54007951-54007970 | None:intergenic | 50.0% |
| !! | GCCATTTGTTATGCCCCAAC+TGG | - | chr5.1:54010955-54010974 | MS.gene43752:CDS | 50.0% |
| !! | GGTTTCTTTGGGTGTTGGTC+TGG | - | chr5.1:54010652-54010671 | MS.gene43752:intron | 50.0% |
| !! | TTCCGAAACACGAGAGCACT+TGG | - | chr5.1:54011851-54011870 | MS.gene43752:CDS | 50.0% |
| AAGAAACACGGAGGCGGAGA+AGG | + | chr5.1:54008056-54008075 | None:intergenic | 55.0% | |
| ACCCCTCAGTTGCTTCTGCT+TGG | - | chr5.1:54012137-54012156 | MS.gene43752:intron | 55.0% | |
| AGAAACACGGAGGCGGAGAA+GGG | + | chr5.1:54008055-54008074 | None:intergenic | 55.0% | |
| AGGGAAGTCTCTGCAGCGAA+GGG | + | chr5.1:54009717-54009736 | None:intergenic | 55.0% | |
| CAGAGCCGCCATTGGGAAAT+TGG | + | chr5.1:54008020-54008039 | None:intergenic | 55.0% | |
| CGCTGCAGAGACTTCCCTAT+TGG | - | chr5.1:54009719-54009738 | MS.gene43752:intron | 55.0% | |
| CTGCAAACGCCATGCATAGC+TGG | - | chr5.1:54010844-54010863 | MS.gene43752:CDS | 55.0% | |
| CTTGTCGTCCGTGCTTTGCT+TGG | - | chr5.1:54009747-54009766 | MS.gene43752:intron | 55.0% | |
| GCAGCGATTAGAGACCACGT+TGG | + | chr5.1:54010828-54010847 | None:intergenic | 55.0% | |
| GCCAAGCAGAAGCAACTGAG+GGG | + | chr5.1:54012141-54012160 | None:intergenic | 55.0% | |
| GCTTGGTCTAGCTGAAGGTG+TGG | - | chr5.1:54009764-54009783 | MS.gene43752:intron | 55.0% | |
| GGTTGCTCCGCCGAAAATGA+TGG | + | chr5.1:54007896-54007915 | None:intergenic | 55.0% | |
| TAGGGAAGTCTCTGCAGCGA+AGG | + | chr5.1:54009718-54009737 | None:intergenic | 55.0% | |
| TCCCTTGACTTAGTTCCGGC+TGG | - | chr5.1:54010103-54010122 | MS.gene43752:intron | 55.0% | |
| TGCTCCGCCGAAAATGATGG+CGG | + | chr5.1:54007893-54007912 | None:intergenic | 55.0% | |
| TTTGCCAAGCTGTGCCATGG+TGG | - | chr5.1:54012620-54012639 | MS.gene43752:intron | 55.0% | |
| ! | AATTGGAGAGTACGGTGCGG+TGG | + | chr5.1:54007948-54007967 | None:intergenic | 55.0% |
| ! | GAGTACGGTGCGGTGGTTTT+TGG | + | chr5.1:54007941-54007960 | None:intergenic | 55.0% |
| ! | GGTCCTGGAGTTAGCCTCAT+TGG | - | chr5.1:54012097-54012116 | MS.gene43752:intron | 55.0% |
| ! | TCCTCCGCCATCATTTTCGG+CGG | - | chr5.1:54007886-54007905 | MS.gene43752:intron | 55.0% |
| ! | TGCCGTTCCATGGGTTGTGA+TGG | - | chr5.1:54011340-54011359 | MS.gene43752:intron | 55.0% |
| !! | AGTGGTAATGGCTTGGGGTG+TGG | - | chr5.1:54009662-54009681 | MS.gene43752:intron | 55.0% |
| ACTGAACGGGCAAGGGCTGT+TGG | - | chr5.1:54010519-54010538 | MS.gene43752:intron | 60.0% | |
| AGAGAGGCAGAGCCGCCATT+GGG | + | chr5.1:54008027-54008046 | None:intergenic | 60.0% | |
| GCCCTTGCCCGTTCAGTTTG+AGG | + | chr5.1:54010516-54010535 | None:intergenic | 60.0% | |
| GGTTGGACTCGCGCTTTCTC+TGG | - | chr5.1:54008270-54008289 | MS.gene43752:intron | 60.0% | |
| TCGATCTCAGGCAGGCAGCT+TGG | - | chr5.1:54011312-54011331 | MS.gene43752:intron | 60.0% | |
| ! | AGTGGTGGCGATGCTCGCTT+TGG | - | chr5.1:54008179-54008198 | MS.gene43752:intron | 60.0% |
| ! | TGGCTTGGGGTGTGGCATTG+TGG | - | chr5.1:54009670-54009689 | MS.gene43752:intron | 60.0% |
| !! | TCCGCCGAAAATGATGGCGG+AGG | + | chr5.1:54007890-54007909 | None:intergenic | 60.0% |
| GAGAGAGGCAGAGCCGCCAT+TGG | + | chr5.1:54008028-54008047 | None:intergenic | 65.0% | |
| CACGGAGGCGGAGAAGGGAG+CGG | + | chr5.1:54008050-54008069 | None:intergenic | 70.0% | |
| GCGGAGAAGGGAGCGGAGAG+AGG | + | chr5.1:54008043-54008062 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 54007883 | 54013758 | 54007883 | ID=MS.gene43752 |
| chr5.1 | mRNA | 54007883 | 54013758 | 54007883 | ID=MS.gene43752.t1;Parent=MS.gene43752 |
| chr5.1 | exon | 54013339 | 54013758 | 54013339 | ID=MS.gene43752.t1.exon1;Parent=MS.gene43752.t1 |
| chr5.1 | CDS | 54013339 | 54013758 | 54013339 | ID=cds.MS.gene43752.t1;Parent=MS.gene43752.t1 |
| chr5.1 | exon | 54011824 | 54012050 | 54011824 | ID=MS.gene43752.t1.exon2;Parent=MS.gene43752.t1 |
| chr5.1 | CDS | 54011824 | 54012050 | 54011824 | ID=cds.MS.gene43752.t1;Parent=MS.gene43752.t1 |
| chr5.1 | exon | 54010775 | 54011135 | 54010775 | ID=MS.gene43752.t1.exon3;Parent=MS.gene43752.t1 |
| chr5.1 | CDS | 54010775 | 54011135 | 54010775 | ID=cds.MS.gene43752.t1;Parent=MS.gene43752.t1 |
| chr5.1 | exon | 54010439 | 54010483 | 54010439 | ID=MS.gene43752.t1.exon4;Parent=MS.gene43752.t1 |
| chr5.1 | CDS | 54010439 | 54010483 | 54010439 | ID=cds.MS.gene43752.t1;Parent=MS.gene43752.t1 |
| chr5.1 | exon | 54010193 | 54010339 | 54010193 | ID=MS.gene43752.t1.exon5;Parent=MS.gene43752.t1 |
| chr5.1 | CDS | 54010193 | 54010339 | 54010193 | ID=cds.MS.gene43752.t1;Parent=MS.gene43752.t1 |
| chr5.1 | exon | 54009422 | 54009559 | 54009422 | ID=MS.gene43752.t1.exon6;Parent=MS.gene43752.t1 |
| chr5.1 | CDS | 54009422 | 54009559 | 54009422 | ID=cds.MS.gene43752.t1;Parent=MS.gene43752.t1 |
| chr5.1 | exon | 54009297 | 54009330 | 54009297 | ID=MS.gene43752.t1.exon7;Parent=MS.gene43752.t1 |
| chr5.1 | CDS | 54009297 | 54009330 | 54009297 | ID=cds.MS.gene43752.t1;Parent=MS.gene43752.t1 |
| chr5.1 | exon | 54008616 | 54008795 | 54008616 | ID=MS.gene43752.t1.exon8;Parent=MS.gene43752.t1 |
| chr5.1 | CDS | 54008616 | 54008795 | 54008616 | ID=cds.MS.gene43752.t1;Parent=MS.gene43752.t1 |
| chr5.1 | exon | 54007883 | 54007890 | 54007883 | ID=MS.gene43752.t1.exon9;Parent=MS.gene43752.t1 |
| chr5.1 | CDS | 54007883 | 54007890 | 54007883 | ID=cds.MS.gene43752.t1;Parent=MS.gene43752.t1 |
| Gene Sequence |
| Protein sequence |
