Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44044.t1 | KEH43055.1 | 70.7 | 584 | 102 | 6 | 1 | 517 | 1 | 582 | 8.80E-217 | 763.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44044.t1 | A0A072VYA6 | 70.7 | 584 | 102 | 6 | 1 | 517 | 1 | 582 | 6.4e-217 | 763.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059868 | MS.gene44044 | 0.816385 | 5.68E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44044.t1 | MTR_1g081850 | 75.897 | 585 | 70 | 5 | 1 | 517 | 1 | 582 | 0.0 | 790 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 182 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCCCATCTTTGTAGGTATT+TGG | 0.142788 | 1.3:-57775310 | None:intergenic |
| CCAAATTTGCCATTCTTAAT+TGG | 0.146526 | 1.3:-57774851 | None:intergenic |
| CCAATTAAGAATGGCAAATT+TGG | 0.205831 | 1.3:+57774851 | MS.gene44044:CDS |
| GGTTTACGCCCGACTTTATA+TGG | 0.224156 | 1.3:-57774932 | None:intergenic |
| ATTACTACCATTATTACTTT+TGG | 0.235546 | 1.3:-57774450 | None:intergenic |
| TTATCACCATCATCGTATTT+AGG | 0.242549 | 1.3:-57775706 | None:intergenic |
| CGGCCTTCTTTGTAGGGATT+TGG | 0.245465 | 1.3:-57775115 | None:intergenic |
| AACAATTATGATGGTCCTAA+TGG | 0.248295 | 1.3:+57775250 | MS.gene44044:CDS |
| TAGCCATCATGAGTACTCTT+TGG | 0.290964 | 1.3:-57775355 | None:intergenic |
| CTCACGTGTTCCATTTCTTA+TGG | 0.291299 | 1.3:-57774393 | None:intergenic |
| GAGGGATATTTCTCTGTTGC+AGG | 0.306095 | 1.3:-57774536 | None:intergenic |
| TCATATTTATCATTCTTTAC+TGG | 0.306162 | 1.3:-57775043 | None:intergenic |
| TAAGAAGTGATGGGAGAGTA+TGG | 0.318605 | 1.3:+57774338 | None:intergenic |
| TGATTCTGCTGCACCTTAGC+TGG | 0.322838 | 1.3:-57774644 | None:intergenic |
| CCAATTGGAATTAGTCCAAT+TGG | 0.326057 | 1.3:+57775223 | MS.gene44044:CDS |
| TACAATAATGGTAAAGGATA+TGG | 0.328975 | 1.3:+57775376 | MS.gene44044:CDS |
| CTCATCGTGCAACAGCTATA+GGG | 0.333286 | 1.3:+57774900 | MS.gene44044:CDS |
| TAGTCACTGCCATATCCATT+AGG | 0.335283 | 1.3:-57775586 | None:intergenic |
| CATGAATTGGCTCGCTTAGT+TGG | 0.339036 | 1.3:-57775813 | None:intergenic |
| TGCCACCTCCAATTGGTTTA+CGG | 0.341095 | 1.3:-57775135 | None:intergenic |
| ACAACTATGATGATCCTAAT+AGG | 0.343663 | 1.3:+57775452 | MS.gene44044:CDS |
| TGGTTTACGGCCTTCTTTGT+AGG | 0.349630 | 1.3:-57775122 | None:intergenic |
| GCTCATCGTGCAACAGCTAT+AGG | 0.360120 | 1.3:+57774899 | MS.gene44044:CDS |
| TTCAATCCCAAAAGTAATAA+TGG | 0.361426 | 1.3:+57774443 | MS.gene44044:CDS |
| TGGTCGCCACCATACCTATT+AGG | 0.372238 | 1.3:-57775466 | None:intergenic |
| GGCCCGTACCTTTGAGGATC+AGG | 0.372409 | 1.3:-57774677 | None:intergenic |
| ATGTTACTTCCAATTCCAAT+AGG | 0.381009 | 1.3:-57775421 | None:intergenic |
| TCATAAGGCCTGCCAGTAAC+TGG | 0.387927 | 1.3:-57774509 | None:intergenic |
| AGAGACGGACGCAGGCCATT+TGG | 0.389669 | 1.3:+57774821 | MS.gene44044:CDS |
| CTTAGGTTGCCACCTCCAAT+TGG | 0.390485 | 1.3:-57775142 | None:intergenic |
| TCTGTTGCAGGTTCATCATA+AGG | 0.391783 | 1.3:-57774524 | None:intergenic |
| TACGATAGCCCTAATGGATA+TGG | 0.395175 | 1.3:+57775577 | MS.gene44044:CDS |
| ACTCATGATGGCTACAATAA+TGG | 0.396654 | 1.3:+57775364 | MS.gene44044:CDS |
| TCATAATTGTTATTCCCAAT+TGG | 0.396702 | 1.3:-57775238 | None:intergenic |
| AGTCATGATGGCTATAATAA+TGG | 0.396877 | 1.3:+57774977 | MS.gene44044:CDS |
| CGCCCGACTTTATATGGACT+TGG | 0.397913 | 1.3:-57774926 | None:intergenic |
| GTACGCAAGCCTATTGGAAT+TGG | 0.399069 | 1.3:+57775412 | MS.gene44044:CDS |
| GCCTTGTTAATATCATGAAT+TGG | 0.399954 | 1.3:-57775826 | None:intergenic |
| CTCCTTATGCCACTTCCAAT+TGG | 0.402341 | 1.3:-57774953 | None:intergenic |
| TTTACTGACAGGACTGGTTC+AGG | 0.402640 | 1.3:+57775949 | MS.gene44044:intron |
| AACAACAGATCCAATTTCAA+TGG | 0.403184 | 1.3:+57775745 | MS.gene44044:CDS |
| GATGGCTATAATAATGGATA+TGG | 0.405412 | 1.3:+57774983 | MS.gene44044:CDS |
| GATGGCTACGATAGCCCTAA+TGG | 0.407690 | 1.3:+57775571 | MS.gene44044:CDS |
| GGTGGTGGTCCTAATGGTTA+TGG | 0.408170 | 1.3:+57774872 | MS.gene44044:CDS |
| TATGGTACCATTTGTCCATA+TGG | 0.408351 | 1.3:+57774791 | MS.gene44044:CDS |
| GGTTTGCGTCCTTCTTTGTA+AGG | 0.408486 | 1.3:-57775517 | None:intergenic |
| AAATTTGGTGGTGGTCCTAA+TGG | 0.410003 | 1.3:+57774866 | MS.gene44044:CDS |
| ACAGAAGTACGCAAGCCTAT+TGG | 0.417374 | 1.3:+57775406 | MS.gene44044:CDS |
| AGCCATCATGAGTACTCTTT+GGG | 0.417590 | 1.3:-57775354 | None:intergenic |
| ATGAATTGGCTCGCTTAGTT+GGG | 0.426373 | 1.3:-57775812 | None:intergenic |
| CCAATTGGACTAATTCCAAT+TGG | 0.427660 | 1.3:-57775223 | None:intergenic |
| GGAATTAGTCCAATTAAGAA+TGG | 0.430938 | 1.3:+57774842 | MS.gene44044:CDS |
| ACTTACAGTACCATAAGAAA+TGG | 0.434820 | 1.3:+57774383 | MS.gene44044:CDS |
| TAGGGATTTGGATCCCCAAC+AGG | 0.437669 | 1.3:-57775103 | None:intergenic |
| TGGTTTACGCCCATCTTTGT+AGG | 0.437894 | 1.3:-57775317 | None:intergenic |
| AAAGAAGGACGCAAGCCAAT+TGG | 0.439635 | 1.3:+57775208 | MS.gene44044:CDS |
| ATCACCGTGCAACACCTGTT+GGG | 0.441594 | 1.3:+57775089 | MS.gene44044:CDS |
| CTTATGCTACCTACTCCAAT+TGG | 0.443093 | 1.3:-57775538 | None:intergenic |
| GCCGATGGACGTAAGCCAAT+TGG | 0.446864 | 1.3:+57774737 | MS.gene44044:CDS |
| ACAATTATGATGGTCCTAAT+GGG | 0.447688 | 1.3:+57775251 | MS.gene44044:CDS |
| AAAGAAGGCCGTAAACCAAT+TGG | 0.449780 | 1.3:+57775127 | MS.gene44044:CDS |
| GGTTTACGGCCTTCTTTGTA+GGG | 0.450758 | 1.3:-57775121 | None:intergenic |
| AAAGAAGGACGCAAACCAAT+TGG | 0.451349 | 1.3:+57775523 | MS.gene44044:CDS |
| CGGCAGTAGGATGTGGTGTA+TGG | 0.454789 | 1.3:-57774718 | None:intergenic |
| CCGTCTCTGTCACCACCATA+TGG | 0.456410 | 1.3:-57774806 | None:intergenic |
| AAAGTCGGGCGTAAACCAAT+TGG | 0.458152 | 1.3:+57774938 | MS.gene44044:CDS |
| TTACGCGGAGAGCTACGAAC+AGG | 0.458879 | 1.3:-57774605 | None:intergenic |
| ACCATCGTGCAACGGGTGTA+GGG | 0.459893 | 1.3:+57775284 | MS.gene44044:CDS |
| ACTACCATCATGGTTGTTAA+CGG | 0.462804 | 1.3:-57774768 | None:intergenic |
| TTAACGGTACTACCTCCAAT+TGG | 0.464732 | 1.3:-57774752 | None:intergenic |
| TTAATTGGACTAATTCCAAA+TGG | 0.469266 | 1.3:-57774836 | None:intergenic |
| TTGGGATTGAAAGGAACAAA+TGG | 0.469306 | 1.3:-57774431 | None:intergenic |
| AGTCACTGCCATATCCATTA+GGG | 0.472047 | 1.3:-57775585 | None:intergenic |
| TGGTCACCACCATACCCATT+AGG | 0.477204 | 1.3:-57775265 | None:intergenic |
| TGGACTGCAGCACCAAGAAA+AGG | 0.477452 | 1.3:+57775787 | MS.gene44044:CDS |
| GTCACCACCATATGGACAAA+TGG | 0.480534 | 1.3:-57774798 | None:intergenic |
| TTTACTGGATTAATTCCAAT+CGG | 0.481467 | 1.3:-57775028 | None:intergenic |
| AACAACCATGATGGTAGTTA+TGG | 0.482332 | 1.3:+57774773 | MS.gene44044:CDS |
| GATGGCTACAATAATGGTAA+AGG | 0.485378 | 1.3:+57775370 | MS.gene44044:CDS |
| ACAATGGGCCCGTACCTTTG+AGG | 0.486735 | 1.3:-57774683 | None:intergenic |
| GATCCAAATACCTACAAAGA+TGG | 0.487186 | 1.3:+57775307 | MS.gene44044:CDS |
| CAATTGGAATTAGTCCAATT+GGG | 0.489494 | 1.3:+57775224 | MS.gene44044:CDS |
| AACCAATTGGAAGTGGCATA+AGG | 0.489800 | 1.3:+57774951 | MS.gene44044:CDS |
| ACTCAGAGGGTGCTGTTACC+AGG | 0.490238 | 1.3:+57774474 | MS.gene44044:CDS |
| GGTGGTGACCATCGTGCAAC+GGG | 0.490471 | 1.3:+57775277 | MS.gene44044:CDS |
| TACCACGATAGTCCAACTTC+AGG | 0.491252 | 1.3:+57775910 | MS.gene44044:CDS |
| CGTCCATCGGCAGTAGGATG+TGG | 0.492741 | 1.3:-57774725 | None:intergenic |
| TGAGCACTACCATAACCATT+AGG | 0.501805 | 1.3:-57774881 | None:intergenic |
| GGAGAAGCATTACCTGAAGT+TGG | 0.503468 | 1.3:-57775922 | None:intergenic |
| GACCATCGTGCAACGGGTGT+AGG | 0.503607 | 1.3:+57775283 | MS.gene44044:CDS |
| ATTAAGAATGGCAAATTTGG+TGG | 0.508987 | 1.3:+57774854 | MS.gene44044:CDS |
| CCCACTAGGAACGGCAGCTA+TGG | 0.512161 | 1.3:+57775628 | MS.gene44044:CDS |
| CAATTGGAGGTGGCAACCTA+AGG | 0.513619 | 1.3:+57775143 | MS.gene44044:CDS |
| GGATTGCTACTACTTACAAA+CGG | 0.514782 | 1.3:-57775685 | None:intergenic |
| TTACAAACGGCTTATCGTTG+TGG | 0.516358 | 1.3:-57775672 | None:intergenic |
| ATTGGGAATAACAATTATGA+TGG | 0.518086 | 1.3:+57775241 | MS.gene44044:CDS |
| AGCCCTGATCCTCAAAGGTA+CGG | 0.518287 | 1.3:+57774674 | MS.gene44044:CDS |
| CAATTGGAGTAGGTAGCATA+AGG | 0.518292 | 1.3:+57775539 | MS.gene44044:CDS |
| AAAGATGGACGCATGCCGAT+TGG | 0.519289 | 1.3:+57775013 | MS.gene44044:CDS |
| ATCCAAGTCCATATAAAGTC+GGG | 0.523712 | 1.3:+57774924 | MS.gene44044:CDS |
| CATGATGGCTATCATGATAA+CGG | 0.528787 | 1.3:+57775172 | MS.gene44044:CDS |
| TCCAATTGGCTTACGTCCAT+CGG | 0.530985 | 1.3:-57774738 | None:intergenic |
| TATGATGATCCTAATAGGTA+TGG | 0.532436 | 1.3:+57775457 | MS.gene44044:CDS |
| GGCAGCTATGGTAACGGCTA+TGG | 0.532788 | 1.3:+57775640 | MS.gene44044:CDS |
| TGATGTTCAGTTCCCAGCTA+AGG | 0.533630 | 1.3:+57774631 | MS.gene44044:CDS |
| TGGCGATCATGATCAACAAT+GGG | 0.536049 | 1.3:-57774698 | None:intergenic |
| GTAAAGAATGATAAATATGA+TGG | 0.536677 | 1.3:+57775046 | MS.gene44044:CDS |
| AAAGATGGGCGTAAACCAAT+CGG | 0.537749 | 1.3:+57775322 | MS.gene44044:CDS |
| TACTGTAAGTCGAGATGCTA+CGG | 0.538510 | 1.3:-57774370 | None:intergenic |
| GATTCTGCTGCACCTTAGCT+GGG | 0.538950 | 1.3:-57774643 | None:intergenic |
| GGACTGCAGCACCAAGAAAA+GGG | 0.542414 | 1.3:+57775788 | MS.gene44044:CDS |
| TTTGGGCTACCTACTCCGAT+TGG | 0.542860 | 1.3:-57775337 | None:intergenic |
| AGCCATCATGAGTACTCCTT+AGG | 0.544182 | 1.3:-57775159 | None:intergenic |
| GGGCGTAAACCAATTGGAAG+TGG | 0.545268 | 1.3:+57774944 | MS.gene44044:CDS |
| GCCCTGATCCTCAAAGGTAC+GGG | 0.545850 | 1.3:+57774675 | MS.gene44044:CDS |
| GATACAGATCCTTACAAAGA+AGG | 0.555203 | 1.3:+57775508 | MS.gene44044:CDS |
| AAGAAGGATACAAGCCCACT+AGG | 0.557406 | 1.3:+57775614 | MS.gene44044:CDS |
| GGCTATCATGATAACGGATA+CGG | 0.558229 | 1.3:+57775178 | MS.gene44044:CDS |
| AGCAATCCTAAATACGATGA+TGG | 0.558765 | 1.3:+57775700 | MS.gene44044:CDS |
| GATCCAAATCCCTACAAAGA+AGG | 0.560072 | 1.3:+57775112 | MS.gene44044:CDS |
| ATCCAAATACCTACAAAGAT+GGG | 0.560782 | 1.3:+57775308 | MS.gene44044:CDS |
| GATCCCCAACAGGTGTTGCA+CGG | 0.563126 | 1.3:-57775093 | None:intergenic |
| TCATGATATTAACAAGGCCA+TGG | 0.563473 | 1.3:+57775831 | MS.gene44044:CDS |
| GGCTATAATAATGGATATGG+TGG | 0.565112 | 1.3:+57774986 | MS.gene44044:CDS |
| TGGTGGTGACCATCGTGCAA+CGG | 0.566354 | 1.3:+57775276 | MS.gene44044:CDS |
| TGGTACCATAACTACCATCA+TGG | 0.566610 | 1.3:-57774778 | None:intergenic |
| AAGAATGGCAAATTTGGTGG+TGG | 0.566789 | 1.3:+57774857 | MS.gene44044:CDS |
| GGCCGTAAACCAATTGGAGG+TGG | 0.568672 | 1.3:+57775133 | MS.gene44044:CDS |
| CCATAGCTGCCGTTCCTAGT+GGG | 0.572062 | 1.3:-57775628 | None:intergenic |
| GGATACGGTGGTGACAAAGA+AGG | 0.574242 | 1.3:+57775193 | MS.gene44044:CDS |
| AATGGTAGTAATTACTCAGA+GGG | 0.575169 | 1.3:+57774461 | MS.gene44044:CDS |
| ACCATAGCTGCCGTTCCTAG+TGG | 0.577131 | 1.3:-57775629 | None:intergenic |
| GACCATCGTGCAGCAGCCGT+TGG | 0.577199 | 1.3:+57775484 | MS.gene44044:CDS |
| AAATTGTACCAGTTACTGGC+AGG | 0.577281 | 1.3:+57774501 | MS.gene44044:CDS |
| TTCCCTCTTCAACAACTCCA+TGG | 0.578105 | 1.3:-57775848 | None:intergenic |
| GATCACCGTGCAACACCTGT+TGG | 0.579832 | 1.3:+57775088 | MS.gene44044:CDS |
| ATCAGATTCATCCTCTGAAG+AGG | 0.580766 | 1.3:-57774555 | None:intergenic |
| GGATATGGTGGTGACAAAGA+TGG | 0.582101 | 1.3:+57774998 | MS.gene44044:CDS |
| GGCCATGGAGTTGTTGAAGA+GGG | 0.586132 | 1.3:+57775846 | MS.gene44044:CDS |
| TATGATGGTCCTAATGGGTA+TGG | 0.586774 | 1.3:+57775256 | MS.gene44044:CDS |
| GAAGGCCGTAAACCAATTGG+AGG | 0.587111 | 1.3:+57775130 | MS.gene44044:CDS |
| CCATCGTGCAACGGGTGTAG+GGG | 0.588729 | 1.3:+57775285 | MS.gene44044:CDS |
| GATCCAAGTCCATATAAAGT+CGG | 0.591135 | 1.3:+57774923 | MS.gene44044:CDS |
| GGATACAAGCCCACTAGGAA+CGG | 0.592747 | 1.3:+57775619 | MS.gene44044:CDS |
| TCATCGTGCAACAGCTATAG+GGG | 0.595435 | 1.3:+57774901 | MS.gene44044:CDS |
| AATAATGGTAAAGGATATGG+TGG | 0.595604 | 1.3:+57775379 | MS.gene44044:CDS |
| AAGGTAGCCCTGATCCTCAA+AGG | 0.599615 | 1.3:+57774669 | MS.gene44044:CDS |
| GTAAGGATCTGTATCTCCAA+CGG | 0.599712 | 1.3:-57775500 | None:intergenic |
| ACACCACATCCTACTGCCGA+TGG | 0.601707 | 1.3:+57774722 | MS.gene44044:CDS |
| TCACCGTGCAACACCTGTTG+GGG | 0.602243 | 1.3:+57775090 | MS.gene44044:CDS |
| GGCATAAGGAGTAGTCATGA+TGG | 0.603063 | 1.3:+57774965 | MS.gene44044:CDS |
| ATGGCGATCATGATCAACAA+TGG | 0.604512 | 1.3:-57774699 | None:intergenic |
| AGCATAAGGAGTACTCAAGA+TGG | 0.606261 | 1.3:+57775553 | MS.gene44044:CDS |
| TATGATGGTACTAATCGCTA+CGG | 0.608087 | 1.3:+57775061 | MS.gene44044:CDS |
| GGGCGTAAACCAATCGGAGT+AGG | 0.608307 | 1.3:+57775328 | MS.gene44044:CDS |
| AAGGTGCAGCAGAATCATGA+AGG | 0.609081 | 1.3:+57774650 | MS.gene44044:CDS |
| GATGGACGTAAGCCAATTGG+AGG | 0.611438 | 1.3:+57774740 | MS.gene44044:CDS |
| TCAGATTCATCCTCTGAAGA+GGG | 0.612282 | 1.3:-57774554 | None:intergenic |
| GCCCGTACCTTTGAGGATCA+GGG | 0.612776 | 1.3:-57774676 | None:intergenic |
| GGACGCAAACCAATTGGAGT+AGG | 0.614319 | 1.3:+57775529 | MS.gene44044:CDS |
| GGCTTACGTCCATCGGCAGT+AGG | 0.616877 | 1.3:-57774731 | None:intergenic |
| GATGATCCTAATAGGTATGG+TGG | 0.620297 | 1.3:+57775460 | MS.gene44044:CDS |
| AACCTAAGGAGTACTCATGA+TGG | 0.625056 | 1.3:+57775157 | MS.gene44044:CDS |
| AGCCCAAAGAGTACTCATGA+TGG | 0.628341 | 1.3:+57775352 | MS.gene44044:CDS |
| AGGCCATGGAGTTGTTGAAG+AGG | 0.631646 | 1.3:+57775845 | MS.gene44044:CDS |
| GTGGTGACAGAGACGGACGC+AGG | 0.638877 | 1.3:+57774813 | MS.gene44044:CDS |
| ATGAATCTGATGATGATGAA+AGG | 0.641665 | 1.3:+57774567 | MS.gene44044:CDS |
| AGAGAAATATCCCTCTTCAG+AGG | 0.641967 | 1.3:+57774544 | MS.gene44044:CDS |
| CTCCAACGGCTGCTGCACGA+TGG | 0.646753 | 1.3:-57775486 | None:intergenic |
| AACTGAACATCAACTTTACG+CGG | 0.648150 | 1.3:-57774620 | None:intergenic |
| AGTACCGTTAACAACCATGA+TGG | 0.650767 | 1.3:+57774764 | MS.gene44044:CDS |
| TACGCGGAGAGCTACGAACA+GGG | 0.651100 | 1.3:-57774604 | None:intergenic |
| CCATATGGTGGTGACAGAGA+CGG | 0.652120 | 1.3:+57774806 | MS.gene44044:CDS |
| AGGAACGGCAGCTATGGTAA+CGG | 0.653758 | 1.3:+57775634 | MS.gene44044:CDS |
| GGTACCATTTGTCCATATGG+TGG | 0.658296 | 1.3:+57774794 | MS.gene44044:CDS |
| GCCAATTCATGATATTAACA+AGG | 0.659678 | 1.3:+57775825 | MS.gene44044:CDS |
| GATGGTCCTAATGGGTATGG+TGG | 0.667619 | 1.3:+57775259 | MS.gene44044:CDS |
| CCCCTACACCCGTTGCACGA+TGG | 0.668910 | 1.3:-57775285 | None:intergenic |
| CTGGTTCAGGTGCTACCATG+AGG | 0.677112 | 1.3:+57775962 | MS.gene44044:CDS |
| TACCTGAAGTTGGACTATCG+TGG | 0.683292 | 1.3:-57775912 | None:intergenic |
| TAATGGTAGTAATTACTCAG+AGG | 0.686298 | 1.3:+57774460 | MS.gene44044:CDS |
| TATCATGATAACGGATACGG+TGG | 0.701599 | 1.3:+57775181 | MS.gene44044:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GACCAAAAATTAATTCATAT+TGG | + | chr1.3:57775767-57775786 | MS.gene44044:CDS | 20.0% |
| !! | GTAAAGAATGATAAATATGA+TGG | + | chr1.3:57775046-57775065 | MS.gene44044:CDS | 20.0% |
| !! | TCATATTTATCATTCTTTAC+TGG | - | chr1.3:57775046-57775065 | None:intergenic | 20.0% |
| !!! | ATTACTACCATTATTACTTT+TGG | - | chr1.3:57774453-57774472 | None:intergenic | 20.0% |
| !!! | GTCCAATATGAATTAATTTT+TGG | - | chr1.3:57775772-57775791 | None:intergenic | 20.0% |
| !!! | TTACTACCATTATTACTTTT+GGG | - | chr1.3:57774452-57774471 | None:intergenic | 20.0% |
| ! | AAAAAAATTGTACCAGTTAC+TGG | + | chr1.3:57774497-57774516 | MS.gene44044:CDS | 25.0% |
| ! | ATTGGGAATAACAATTATGA+TGG | + | chr1.3:57775241-57775260 | MS.gene44044:CDS | 25.0% |
| ! | TACAATAATGGTAAAGGATA+TGG | + | chr1.3:57775376-57775395 | MS.gene44044:CDS | 25.0% |
| ! | TTAATTGGACTAATTCCAAA+TGG | - | chr1.3:57774839-57774858 | None:intergenic | 25.0% |
| ! | TTCAATCCCAAAAGTAATAA+TGG | + | chr1.3:57774443-57774462 | MS.gene44044:CDS | 25.0% |
| ! | TTTACTGGATTAATTCCAAT+CGG | - | chr1.3:57775031-57775050 | None:intergenic | 25.0% |
| !! | TCATAATTGTTATTCCCAAT+TGG | - | chr1.3:57775241-57775260 | None:intergenic | 25.0% |
| !!! | AATTTTTGGTCCATTGAAAT+TGG | - | chr1.3:57775758-57775777 | None:intergenic | 25.0% |
| !!! | TTATTACTTTTGGGATTGAA+AGG | - | chr1.3:57774443-57774462 | None:intergenic | 25.0% |
| AACAACAGATCCAATTTCAA+TGG | + | chr1.3:57775745-57775764 | MS.gene44044:CDS | 30.0% | |
| AACAATTATGATGGTCCTAA+TGG | + | chr1.3:57775250-57775269 | MS.gene44044:CDS | 30.0% | |
| AATAATGGTAAAGGATATGG+TGG | + | chr1.3:57775379-57775398 | MS.gene44044:CDS | 30.0% | |
| AATGGTAGTAATTACTCAGA+GGG | + | chr1.3:57774461-57774480 | MS.gene44044:CDS | 30.0% | |
| ACAACTATGATGATCCTAAT+AGG | + | chr1.3:57775452-57775471 | MS.gene44044:CDS | 30.0% | |
| ACAATTATGATGGTCCTAAT+GGG | + | chr1.3:57775251-57775270 | MS.gene44044:CDS | 30.0% | |
| ACTTACAGTACCATAAGAAA+TGG | + | chr1.3:57774383-57774402 | MS.gene44044:CDS | 30.0% | |
| AGTCATGATGGCTATAATAA+TGG | + | chr1.3:57774977-57774996 | MS.gene44044:CDS | 30.0% | |
| ATCCAAATACCTACAAAGAT+GGG | + | chr1.3:57775308-57775327 | MS.gene44044:CDS | 30.0% | |
| ATTAAGAATGGCAAATTTGG+TGG | + | chr1.3:57774854-57774873 | MS.gene44044:CDS | 30.0% | |
| CAATTGGAATTAGTCCAATT+GGG | + | chr1.3:57775224-57775243 | MS.gene44044:CDS | 30.0% | |
| CCAAATTTGCCATTCTTAAT+TGG | - | chr1.3:57774854-57774873 | None:intergenic | 30.0% | |
| CCAATTAAGAATGGCAAATT+TGG | + | chr1.3:57774851-57774870 | MS.gene44044:CDS | 30.0% | |
| GCCAATTCATGATATTAACA+AGG | + | chr1.3:57775825-57775844 | MS.gene44044:CDS | 30.0% | |
| GGAATTAGTCCAATTAAGAA+TGG | + | chr1.3:57774842-57774861 | MS.gene44044:CDS | 30.0% | |
| TAATGGTAGTAATTACTCAG+AGG | + | chr1.3:57774460-57774479 | MS.gene44044:CDS | 30.0% | |
| TATGATGATCCTAATAGGTA+TGG | + | chr1.3:57775457-57775476 | MS.gene44044:CDS | 30.0% | |
| TTATCACCATCATCGTATTT+AGG | - | chr1.3:57775709-57775728 | None:intergenic | 30.0% | |
| ! | ATGAATCTGATGATGATGAA+AGG | + | chr1.3:57774567-57774586 | MS.gene44044:CDS | 30.0% |
| ! | ATGTTACTTCCAATTCCAAT+AGG | - | chr1.3:57775424-57775443 | None:intergenic | 30.0% |
| ! | GCCTTGTTAATATCATGAAT+TGG | - | chr1.3:57775829-57775848 | None:intergenic | 30.0% |
| !! | GATGGCTATAATAATGGATA+TGG | + | chr1.3:57774983-57775002 | MS.gene44044:CDS | 30.0% |
| !!! | AACTGGTACAATTTTTTTCC+TGG | - | chr1.3:57774495-57774514 | None:intergenic | 30.0% |
| !!! | ACAAATGGTTTTATAACAGC+AGG | - | chr1.3:57774419-57774438 | None:intergenic | 30.0% |
| AACAACCATGATGGTAGTTA+TGG | + | chr1.3:57774773-57774792 | MS.gene44044:CDS | 35.0% | |
| AACTGAACATCAACTTTACG+CGG | - | chr1.3:57774623-57774642 | None:intergenic | 35.0% | |
| ACTACCATCATGGTTGTTAA+CGG | - | chr1.3:57774771-57774790 | None:intergenic | 35.0% | |
| ACTCATGATGGCTACAATAA+TGG | + | chr1.3:57775364-57775383 | MS.gene44044:CDS | 35.0% | |
| AGCAATCCTAAATACGATGA+TGG | + | chr1.3:57775700-57775719 | MS.gene44044:CDS | 35.0% | |
| ATCCAAGTCCATATAAAGTC+GGG | + | chr1.3:57774924-57774943 | MS.gene44044:CDS | 35.0% | |
| CATGATGGCTATCATGATAA+CGG | + | chr1.3:57775172-57775191 | MS.gene44044:CDS | 35.0% | |
| CCAATTGGAATTAGTCCAAT+TGG | + | chr1.3:57775223-57775242 | MS.gene44044:CDS | 35.0% | |
| CCAATTGGACTAATTCCAAT+TGG | - | chr1.3:57775226-57775245 | None:intergenic | 35.0% | |
| GATACAGATCCTTACAAAGA+AGG | + | chr1.3:57775508-57775527 | MS.gene44044:CDS | 35.0% | |
| GATCCAAATACCTACAAAGA+TGG | + | chr1.3:57775307-57775326 | MS.gene44044:CDS | 35.0% | |
| GATCCAAGTCCATATAAAGT+CGG | + | chr1.3:57774923-57774942 | MS.gene44044:CDS | 35.0% | |
| GATGGCTACAATAATGGTAA+AGG | + | chr1.3:57775370-57775389 | MS.gene44044:CDS | 35.0% | |
| GGATTGCTACTACTTACAAA+CGG | - | chr1.3:57775688-57775707 | None:intergenic | 35.0% | |
| TATGATGGTACTAATCGCTA+CGG | + | chr1.3:57775061-57775080 | MS.gene44044:CDS | 35.0% | |
| TATGGTACCATTTGTCCATA+TGG | + | chr1.3:57774791-57774810 | MS.gene44044:CDS | 35.0% | |
| TCATGATATTAACAAGGCCA+TGG | + | chr1.3:57775831-57775850 | MS.gene44044:CDS | 35.0% | |
| TTGGGATTGAAAGGAACAAA+TGG | - | chr1.3:57774434-57774453 | None:intergenic | 35.0% | |
| !! | GGCTATAATAATGGATATGG+TGG | + | chr1.3:57774986-57775005 | MS.gene44044:CDS | 35.0% |
| AAAGAAGGACGCAAACCAAT+TGG | + | chr1.3:57775523-57775542 | MS.gene44044:CDS | 40.0% | |
| AAAGAAGGCCGTAAACCAAT+TGG | + | chr1.3:57775127-57775146 | MS.gene44044:CDS | 40.0% | |
| AAAGATGGGCGTAAACCAAT+CGG | + | chr1.3:57775322-57775341 | MS.gene44044:CDS | 40.0% | |
| AAATTGTACCAGTTACTGGC+AGG | + | chr1.3:57774501-57774520 | MS.gene44044:CDS | 40.0% | |
| AACCAATTGGAAGTGGCATA+AGG | + | chr1.3:57774951-57774970 | MS.gene44044:CDS | 40.0% | |
| AGAGAAATATCCCTCTTCAG+AGG | + | chr1.3:57774544-57774563 | MS.gene44044:CDS | 40.0% | |
| AGCCATCATGAGTACTCTTT+GGG | - | chr1.3:57775357-57775376 | None:intergenic | 40.0% | |
| AGTACCGTTAACAACCATGA+TGG | + | chr1.3:57774764-57774783 | MS.gene44044:CDS | 40.0% | |
| AGTCACTGCCATATCCATTA+GGG | - | chr1.3:57775588-57775607 | None:intergenic | 40.0% | |
| ATGGCGATCATGATCAACAA+TGG | - | chr1.3:57774702-57774721 | None:intergenic | 40.0% | |
| CAATTGGAGTAGGTAGCATA+AGG | + | chr1.3:57775539-57775558 | MS.gene44044:CDS | 40.0% | |
| CTCACGTGTTCCATTTCTTA+TGG | - | chr1.3:57774396-57774415 | None:intergenic | 40.0% | |
| CTTATGCTACCTACTCCAAT+TGG | - | chr1.3:57775541-57775560 | None:intergenic | 40.0% | |
| GATCCAAATCCCTACAAAGA+AGG | + | chr1.3:57775112-57775131 | MS.gene44044:CDS | 40.0% | |
| GATGATCCTAATAGGTATGG+TGG | + | chr1.3:57775460-57775479 | MS.gene44044:CDS | 40.0% | |
| GGCAGTGACTACAAAAAAGA+AGG | + | chr1.3:57775598-57775617 | MS.gene44044:CDS | 40.0% | |
| GTAAGGATCTGTATCTCCAA+CGG | - | chr1.3:57775503-57775522 | None:intergenic | 40.0% | |
| TACTGTAAGTCGAGATGCTA+CGG | - | chr1.3:57774373-57774392 | None:intergenic | 40.0% | |
| TAGCCATCATGAGTACTCTT+TGG | - | chr1.3:57775358-57775377 | None:intergenic | 40.0% | |
| TAGTCACTGCCATATCCATT+AGG | - | chr1.3:57775589-57775608 | None:intergenic | 40.0% | |
| TCTGTTGCAGGTTCATCATA+AGG | - | chr1.3:57774527-57774546 | None:intergenic | 40.0% | |
| TGAGCACTACCATAACCATT+AGG | - | chr1.3:57774884-57774903 | None:intergenic | 40.0% | |
| TGGCGATCATGATCAACAAT+GGG | - | chr1.3:57774701-57774720 | None:intergenic | 40.0% | |
| TGGTACCATAACTACCATCA+TGG | - | chr1.3:57774781-57774800 | None:intergenic | 40.0% | |
| TTAACGGTACTACCTCCAAT+TGG | - | chr1.3:57774755-57774774 | None:intergenic | 40.0% | |
| TTACAAACGGCTTATCGTTG+TGG | - | chr1.3:57775675-57775694 | None:intergenic | 40.0% | |
| ! | AAGAATGGCAAATTTGGTGG+TGG | + | chr1.3:57774857-57774876 | MS.gene44044:CDS | 40.0% |
| ! | ATCAGATTCATCCTCTGAAG+AGG | - | chr1.3:57774558-57774577 | None:intergenic | 40.0% |
| ! | TACGATAGCCCTAATGGATA+TGG | + | chr1.3:57775577-57775596 | MS.gene44044:CDS | 40.0% |
| ! | TATGATGGTCCTAATGGGTA+TGG | + | chr1.3:57775256-57775275 | MS.gene44044:CDS | 40.0% |
| ! | TCAGATTCATCCTCTGAAGA+GGG | - | chr1.3:57774557-57774576 | None:intergenic | 40.0% |
| !! | AAATTTGGTGGTGGTCCTAA+TGG | + | chr1.3:57774866-57774885 | MS.gene44044:CDS | 40.0% |
| !! | AACCTAAGGAGTACTCATGA+TGG | + | chr1.3:57775157-57775176 | MS.gene44044:CDS | 40.0% |
| !! | AGCATAAGGAGTACTCAAGA+TGG | + | chr1.3:57775553-57775572 | MS.gene44044:CDS | 40.0% |
| !! | ATGAATTGGCTCGCTTAGTT+GGG | - | chr1.3:57775815-57775834 | None:intergenic | 40.0% |
| !! | GGCTATCATGATAACGGATA+CGG | + | chr1.3:57775178-57775197 | MS.gene44044:CDS | 40.0% |
| !! | TATCATGATAACGGATACGG+TGG | + | chr1.3:57775181-57775200 | MS.gene44044:CDS | 40.0% |
| AAAGAAGGACGCAAGCCAAT+TGG | + | chr1.3:57775208-57775227 | MS.gene44044:CDS | 45.0% | |
| AAAGTCGGGCGTAAACCAAT+TGG | + | chr1.3:57774938-57774957 | MS.gene44044:CDS | 45.0% | |
| AAGAAGGATACAAGCCCACT+AGG | + | chr1.3:57775614-57775633 | MS.gene44044:CDS | 45.0% | |
| AAGGTGCAGCAGAATCATGA+AGG | + | chr1.3:57774650-57774669 | MS.gene44044:CDS | 45.0% | |
| AGCCATCATGAGTACTCCTT+AGG | - | chr1.3:57775162-57775181 | None:intergenic | 45.0% | |
| CGCCCATCTTTGTAGGTATT+TGG | - | chr1.3:57775313-57775332 | None:intergenic | 45.0% | |
| CTCATCGTGCAACAGCTATA+GGG | + | chr1.3:57774900-57774919 | MS.gene44044:CDS | 45.0% | |
| GAGGGATATTTCTCTGTTGC+AGG | - | chr1.3:57774539-57774558 | None:intergenic | 45.0% | |
| GGCATAAGGAGTAGTCATGA+TGG | + | chr1.3:57774965-57774984 | MS.gene44044:CDS | 45.0% | |
| GGTACCATTTGTCCATATGG+TGG | + | chr1.3:57774794-57774813 | MS.gene44044:CDS | 45.0% | |
| GGTTTACGCCCGACTTTATA+TGG | - | chr1.3:57774935-57774954 | None:intergenic | 45.0% | |
| GGTTTACGGCCTTCTTTGTA+GGG | - | chr1.3:57775124-57775143 | None:intergenic | 45.0% | |
| GGTTTGCGTCCTTCTTTGTA+AGG | - | chr1.3:57775520-57775539 | None:intergenic | 45.0% | |
| GTACGCAAGCCTATTGGAAT+TGG | + | chr1.3:57775412-57775431 | MS.gene44044:CDS | 45.0% | |
| GTCACCACCATATGGACAAA+TGG | - | chr1.3:57774801-57774820 | None:intergenic | 45.0% | |
| TACCACGATAGTCCAACTTC+AGG | + | chr1.3:57775910-57775929 | MS.gene44044:CDS | 45.0% | |
| TACCTGAAGTTGGACTATCG+TGG | - | chr1.3:57775915-57775934 | None:intergenic | 45.0% | |
| TCATCGTGCAACAGCTATAG+GGG | + | chr1.3:57774901-57774920 | MS.gene44044:CDS | 45.0% | |
| TGATGTTCAGTTCCCAGCTA+AGG | + | chr1.3:57774631-57774650 | MS.gene44044:CDS | 45.0% | |
| TGGTTTACGCCCATCTTTGT+AGG | - | chr1.3:57775320-57775339 | None:intergenic | 45.0% | |
| TGGTTTACGGCCTTCTTTGT+AGG | - | chr1.3:57775125-57775144 | None:intergenic | 45.0% | |
| TTCCCTCTTCAACAACTCCA+TGG | - | chr1.3:57775851-57775870 | None:intergenic | 45.0% | |
| ! | ACAGAAGTACGCAAGCCTAT+TGG | + | chr1.3:57775406-57775425 | MS.gene44044:CDS | 45.0% |
| ! | CTCCTTATGCCACTTCCAAT+TGG | - | chr1.3:57774956-57774975 | None:intergenic | 45.0% |
| ! | CTTAGTTGGGTCCCTTTTCT+TGG | - | chr1.3:57775802-57775821 | None:intergenic | 45.0% |
| ! | GGATATGGTGGTGACAAAGA+TGG | + | chr1.3:57774998-57775017 | MS.gene44044:CDS | 45.0% |
| ! | TCCAATTGGCTTACGTCCAT+CGG | - | chr1.3:57774741-57774760 | None:intergenic | 45.0% |
| ! | TGCCACCTCCAATTGGTTTA+CGG | - | chr1.3:57775138-57775157 | None:intergenic | 45.0% |
| !! | AGCCCAAAGAGTACTCATGA+TGG | + | chr1.3:57775352-57775371 | MS.gene44044:CDS | 45.0% |
| !! | CATGAATTGGCTCGCTTAGT+TGG | - | chr1.3:57775816-57775835 | None:intergenic | 45.0% |
| !! | GGAGAAGCATTACCTGAAGT+TGG | - | chr1.3:57775925-57775944 | None:intergenic | 45.0% |
| !! | TTTACTGACAGGACTGGTTC+AGG | + | chr1.3:57775949-57775968 | MS.gene44044:intron | 45.0% |
| AAAGATGGACGCATGCCGAT+TGG | + | chr1.3:57775013-57775032 | MS.gene44044:CDS | 50.0% | |
| AAGGTAGCCCTGATCCTCAA+AGG | + | chr1.3:57774669-57774688 | MS.gene44044:CDS | 50.0% | |
| AGCCCTGATCCTCAAAGGTA+CGG | + | chr1.3:57774674-57774693 | MS.gene44044:CDS | 50.0% | |
| AGGAACGGCAGCTATGGTAA+CGG | + | chr1.3:57775634-57775653 | MS.gene44044:CDS | 50.0% | |
| AGGCCATGGAGTTGTTGAAG+AGG | + | chr1.3:57775845-57775864 | MS.gene44044:CDS | 50.0% | |
| ATCACCGTGCAACACCTGTT+GGG | + | chr1.3:57775089-57775108 | MS.gene44044:CDS | 50.0% | |
| CAATTGGAGGTGGCAACCTA+AGG | + | chr1.3:57775143-57775162 | MS.gene44044:CDS | 50.0% | |
| CGCCCGACTTTATATGGACT+TGG | - | chr1.3:57774929-57774948 | None:intergenic | 50.0% | |
| CGGCCTTCTTTGTAGGGATT+TGG | - | chr1.3:57775118-57775137 | None:intergenic | 50.0% | |
| CTTCTCCTCGCTTTACTGAC+AGG | + | chr1.3:57775938-57775957 | MS.gene44044:intron | 50.0% | |
| GAAGGCCGTAAACCAATTGG+AGG | + | chr1.3:57775130-57775149 | MS.gene44044:CDS | 50.0% | |
| GATGGACGTAAGCCAATTGG+AGG | + | chr1.3:57774740-57774759 | MS.gene44044:CDS | 50.0% | |
| GATGGCTACGATAGCCCTAA+TGG | + | chr1.3:57775571-57775590 | MS.gene44044:CDS | 50.0% | |
| GATTCTGCTGCACCTTAGCT+GGG | - | chr1.3:57774646-57774665 | None:intergenic | 50.0% | |
| GCTCATCGTGCAACAGCTAT+AGG | + | chr1.3:57774899-57774918 | MS.gene44044:CDS | 50.0% | |
| GGACGCAAACCAATTGGAGT+AGG | + | chr1.3:57775529-57775548 | MS.gene44044:CDS | 50.0% | |
| GGACTGCAGCACCAAGAAAA+GGG | + | chr1.3:57775788-57775807 | MS.gene44044:CDS | 50.0% | |
| GGATACAAGCCCACTAGGAA+CGG | + | chr1.3:57775619-57775638 | MS.gene44044:CDS | 50.0% | |
| GGATACGGTGGTGACAAAGA+AGG | + | chr1.3:57775193-57775212 | MS.gene44044:CDS | 50.0% | |
| GGCCATGGAGTTGTTGAAGA+GGG | + | chr1.3:57775846-57775865 | MS.gene44044:CDS | 50.0% | |
| GGGCGTAAACCAATTGGAAG+TGG | + | chr1.3:57774944-57774963 | MS.gene44044:CDS | 50.0% | |
| TAGGGATTTGGATCCCCAAC+AGG | - | chr1.3:57775106-57775125 | None:intergenic | 50.0% | |
| TCATAAGGCCTGCCAGTAAC+TGG | - | chr1.3:57774512-57774531 | None:intergenic | 50.0% | |
| TGATTCTGCTGCACCTTAGC+TGG | - | chr1.3:57774647-57774666 | None:intergenic | 50.0% | |
| TGGACTGCAGCACCAAGAAA+AGG | + | chr1.3:57775787-57775806 | MS.gene44044:CDS | 50.0% | |
| TGGTCACCACCATACCCATT+AGG | - | chr1.3:57775268-57775287 | None:intergenic | 50.0% | |
| TGGTCGCCACCATACCTATT+AGG | - | chr1.3:57775469-57775488 | None:intergenic | 50.0% | |
| TTTGGGCTACCTACTCCGAT+TGG | - | chr1.3:57775340-57775359 | None:intergenic | 50.0% | |
| ! | CCATATGGTGGTGACAGAGA+CGG | + | chr1.3:57774806-57774825 | MS.gene44044:CDS | 50.0% |
| ! | CTTAGGTTGCCACCTCCAAT+TGG | - | chr1.3:57775145-57775164 | None:intergenic | 50.0% |
| ! | GATGGTCCTAATGGGTATGG+TGG | + | chr1.3:57775259-57775278 | MS.gene44044:CDS | 50.0% |
| ! | GGTGGTGGTCCTAATGGTTA+TGG | + | chr1.3:57774872-57774891 | MS.gene44044:CDS | 50.0% |
| ACAATGGGCCCGTACCTTTG+AGG | - | chr1.3:57774686-57774705 | None:intergenic | 55.0% | |
| ACACCACATCCTACTGCCGA+TGG | + | chr1.3:57774722-57774741 | MS.gene44044:CDS | 55.0% | |
| ACCATAGCTGCCGTTCCTAG+TGG | - | chr1.3:57775632-57775651 | None:intergenic | 55.0% | |
| ACCATCGTGCAACGGGTGTA+GGG | + | chr1.3:57775284-57775303 | MS.gene44044:CDS | 55.0% | |
| CCAGTCCTGTCAGTAAAGCG+AGG | - | chr1.3:57775946-57775965 | None:intergenic | 55.0% | |
| CCATAGCTGCCGTTCCTAGT+GGG | - | chr1.3:57775631-57775650 | None:intergenic | 55.0% | |
| CCGTCTCTGTCACCACCATA+TGG | - | chr1.3:57774809-57774828 | None:intergenic | 55.0% | |
| CCTCGCTTTACTGACAGGAC+TGG | + | chr1.3:57775943-57775962 | MS.gene44044:intron | 55.0% | |
| CGGCAGTAGGATGTGGTGTA+TGG | - | chr1.3:57774721-57774740 | None:intergenic | 55.0% | |
| GATCACCGTGCAACACCTGT+TGG | + | chr1.3:57775088-57775107 | MS.gene44044:CDS | 55.0% | |
| GCCGATGGACGTAAGCCAAT+TGG | + | chr1.3:57774737-57774756 | MS.gene44044:CDS | 55.0% | |
| GGCCGTAAACCAATTGGAGG+TGG | + | chr1.3:57775133-57775152 | MS.gene44044:CDS | 55.0% | |
| GGGCGTAAACCAATCGGAGT+AGG | + | chr1.3:57775328-57775347 | MS.gene44044:CDS | 55.0% | |
| TACGCGGAGAGCTACGAACA+GGG | - | chr1.3:57774607-57774626 | None:intergenic | 55.0% | |
| TCACCGTGCAACACCTGTTG+GGG | + | chr1.3:57775090-57775109 | MS.gene44044:CDS | 55.0% | |
| TTACGCGGAGAGCTACGAAC+AGG | - | chr1.3:57774608-57774627 | None:intergenic | 55.0% | |
| ! | GATCCCCAACAGGTGTTGCA+CGG | - | chr1.3:57775096-57775115 | None:intergenic | 55.0% |
| ! | GCCCGTACCTTTGAGGATCA+GGG | - | chr1.3:57774679-57774698 | None:intergenic | 55.0% |
| ! | GCCCTGATCCTCAAAGGTAC+GGG | + | chr1.3:57774675-57774694 | MS.gene44044:CDS | 55.0% |
| ! | TGGTGGTGACCATCGTGCAA+CGG | + | chr1.3:57775276-57775295 | MS.gene44044:CDS | 55.0% |
| !! | ACTCAGAGGGTGCTGTTACC+AGG | + | chr1.3:57774474-57774493 | MS.gene44044:CDS | 55.0% |
| !! | GGCAGCTATGGTAACGGCTA+TGG | + | chr1.3:57775640-57775659 | MS.gene44044:CDS | 55.0% |
| AGAGACGGACGCAGGCCATT+TGG | + | chr1.3:57774821-57774840 | MS.gene44044:CDS | 60.0% | |
| CCATCGTGCAACGGGTGTAG+GGG | + | chr1.3:57775285-57775304 | MS.gene44044:CDS | 60.0% | |
| CCCACTAGGAACGGCAGCTA+TGG | + | chr1.3:57775628-57775647 | MS.gene44044:CDS | 60.0% | |
| CGTCCATCGGCAGTAGGATG+TGG | - | chr1.3:57774728-57774747 | None:intergenic | 60.0% | |
| GACCATCGTGCAACGGGTGT+AGG | + | chr1.3:57775283-57775302 | MS.gene44044:CDS | 60.0% | |
| GGCTTACGTCCATCGGCAGT+AGG | - | chr1.3:57774734-57774753 | None:intergenic | 60.0% | |
| GGTGGTGACCATCGTGCAAC+GGG | + | chr1.3:57775277-57775296 | MS.gene44044:CDS | 60.0% | |
| ! | GGCCCGTACCTTTGAGGATC+AGG | - | chr1.3:57774680-57774699 | None:intergenic | 60.0% |
| CCCCTACACCCGTTGCACGA+TGG | - | chr1.3:57775288-57775307 | None:intergenic | 65.0% | |
| CTCCAACGGCTGCTGCACGA+TGG | - | chr1.3:57775489-57775508 | None:intergenic | 65.0% | |
| GACCATCGTGCAGCAGCCGT+TGG | + | chr1.3:57775484-57775503 | MS.gene44044:CDS | 65.0% | |
| GTGGTGACAGAGACGGACGC+AGG | + | chr1.3:57774813-57774832 | MS.gene44044:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 57774347 | 57775982 | 57774347 | ID=MS.gene44044 |
| chr1.3 | mRNA | 57774347 | 57775982 | 57774347 | ID=MS.gene44044.t1;Parent=MS.gene44044 |
| chr1.3 | exon | 57774347 | 57775931 | 57774347 | ID=MS.gene44044.t1.exon1;Parent=MS.gene44044.t1 |
| chr1.3 | CDS | 57774347 | 57775931 | 57774347 | ID=cds.MS.gene44044.t1;Parent=MS.gene44044.t1 |
| chr1.3 | exon | 57775960 | 57775982 | 57775960 | ID=MS.gene44044.t1.exon2;Parent=MS.gene44044.t1 |
| chr1.3 | CDS | 57775960 | 57775982 | 57775960 | ID=cds.MS.gene44044.t1;Parent=MS.gene44044.t1 |
| Gene Sequence |
| Protein sequence |
