Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44490.t1 | XP_003608463.1 | 97 | 297 | 9 | 0 | 1 | 297 | 1 | 297 | 3.90E-166 | 594 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44490.t1 | Q8VZJ7 | 67.5 | 292 | 89 | 2 | 6 | 295 | 1 | 288 | 7.6e-110 | 398.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44490.t1 | G7JCT5 | 97.0 | 297 | 9 | 0 | 1 | 297 | 1 | 297 | 2.8e-166 | 594.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene44490 | MS.gene56734 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44490.t1 | MTR_4g095370 | 96.970 | 297 | 9 | 0 | 1 | 297 | 1 | 297 | 0.0 | 602 |
| MS.gene44490.t1 | MTR_4g095370 | 96.618 | 207 | 7 | 0 | 1 | 207 | 1 | 207 | 1.13e-148 | 415 |
| MS.gene44490.t1 | MTR_4g095370 | 96.602 | 206 | 7 | 0 | 1 | 206 | 1 | 206 | 2.72e-148 | 415 |
| MS.gene44490.t1 | MTR_5g016090 | 73.702 | 289 | 74 | 2 | 1 | 289 | 1 | 287 | 1.68e-145 | 410 |
| MS.gene44490.t1 | MTR_8g074810 | 46.154 | 208 | 105 | 4 | 86 | 289 | 68 | 272 | 5.65e-62 | 197 |
| MS.gene44490.t1 | MTR_5g022960 | 47.368 | 209 | 101 | 6 | 86 | 289 | 79 | 283 | 1.97e-60 | 194 |
| MS.gene44490.t1 | MTR_5g016090 | 65.698 | 172 | 57 | 2 | 1 | 172 | 1 | 170 | 4.70e-60 | 191 |
| MS.gene44490.t1 | MTR_8g074890 | 45.192 | 208 | 107 | 4 | 86 | 289 | 67 | 271 | 1.25e-59 | 191 |
| MS.gene44490.t1 | MTR_8g074880 | 43.269 | 208 | 111 | 4 | 86 | 289 | 116 | 320 | 6.78e-56 | 184 |
| MS.gene44490.t1 | MTR_8g074830 | 41.935 | 217 | 119 | 4 | 77 | 289 | 62 | 275 | 9.68e-55 | 179 |
| MS.gene44490.t1 | MTR_3g114670 | 44.762 | 210 | 105 | 7 | 86 | 289 | 70 | 274 | 6.27e-54 | 177 |
| MS.gene44490.t1 | MTR_8g074870 | 43.269 | 208 | 97 | 6 | 86 | 289 | 29 | 219 | 1.39e-51 | 169 |
| MS.gene44490.t1 | MTR_2g020800 | 44.248 | 226 | 113 | 7 | 73 | 289 | 26 | 247 | 5.40e-51 | 170 |
| MS.gene44490.t1 | MTR_2g020800 | 43.421 | 228 | 114 | 7 | 73 | 289 | 26 | 249 | 1.05e-50 | 169 |
| MS.gene44490.t1 | MTR_6g009440 | 39.744 | 234 | 131 | 6 | 68 | 295 | 32 | 261 | 3.60e-49 | 166 |
| MS.gene44490.t1 | MTR_4g118560 | 43.269 | 208 | 109 | 5 | 88 | 289 | 40 | 244 | 3.98e-48 | 162 |
| MS.gene44490.t1 | MTR_3g114610 | 42.308 | 208 | 106 | 7 | 86 | 288 | 97 | 295 | 1.70e-45 | 156 |
| MS.gene44490.t1 | MTR_1g116810 | 41.748 | 206 | 115 | 4 | 86 | 290 | 76 | 277 | 8.55e-44 | 151 |
| MS.gene44490.t1 | MTR_3g114590 | 40.952 | 210 | 107 | 5 | 86 | 289 | 65 | 263 | 4.43e-43 | 155 |
| MS.gene44490.t1 | MTR_3g114590 | 38.743 | 191 | 95 | 8 | 100 | 289 | 291 | 460 | 1.65e-28 | 115 |
| MS.gene44490.t1 | MTR_5g022960 | 41.085 | 129 | 71 | 4 | 86 | 213 | 79 | 203 | 1.70e-26 | 103 |
| MS.gene44490.t1 | MTR_3g051200 | 36.364 | 143 | 74 | 6 | 87 | 225 | 17 | 146 | 6.67e-20 | 84.7 |
| MS.gene44490.t1 | MTR_6g053720 | 22.180 | 266 | 175 | 8 | 30 | 291 | 6 | 243 | 1.39e-16 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44490.t1 | AT4G33910 | 67.466 | 292 | 89 | 2 | 6 | 295 | 1 | 288 | 2.66e-143 | 405 |
| MS.gene44490.t1 | AT2G23096 | 56.631 | 279 | 105 | 4 | 14 | 290 | 6 | 270 | 4.13e-110 | 320 |
| MS.gene44490.t1 | AT5G66060 | 38.078 | 281 | 158 | 8 | 14 | 289 | 14 | 283 | 2.37e-58 | 189 |
| MS.gene44490.t1 | AT1G20270 | 45.455 | 209 | 105 | 6 | 86 | 289 | 77 | 281 | 1.14e-56 | 184 |
| MS.gene44490.t1 | AT4G35810 | 43.602 | 211 | 108 | 7 | 85 | 289 | 80 | 285 | 2.21e-53 | 176 |
| MS.gene44490.t1 | AT4G35810 | 43.602 | 211 | 108 | 7 | 85 | 289 | 80 | 285 | 2.21e-53 | 176 |
| MS.gene44490.t1 | AT2G17720 | 41.429 | 210 | 108 | 6 | 86 | 287 | 81 | 283 | 3.00e-51 | 171 |
| MS.gene44490.t1 | AT3G28480 | 41.778 | 225 | 116 | 6 | 71 | 289 | 45 | 260 | 1.12e-50 | 170 |
| MS.gene44490.t1 | AT3G28490 | 41.463 | 205 | 115 | 2 | 88 | 289 | 35 | 237 | 3.63e-49 | 165 |
| MS.gene44490.t1 | AT5G18900 | 44.231 | 208 | 107 | 5 | 88 | 289 | 40 | 244 | 2.03e-48 | 163 |
| MS.gene44490.t1 | AT3G06300 | 41.148 | 209 | 112 | 5 | 88 | 289 | 41 | 245 | 1.46e-46 | 159 |
| MS.gene44490.t1 | AT3G28480 | 39.301 | 229 | 124 | 6 | 71 | 289 | 45 | 268 | 1.04e-44 | 154 |
| MS.gene44490.t1 | AT2G43080 | 33.452 | 281 | 173 | 7 | 17 | 290 | 6 | 279 | 2.05e-44 | 152 |
| MS.gene44490.t1 | AT4G35820 | 35.204 | 196 | 98 | 5 | 85 | 272 | 88 | 262 | 8.72e-34 | 124 |
| MS.gene44490.t1 | AT5G66060 | 34.404 | 218 | 129 | 7 | 14 | 230 | 14 | 218 | 1.50e-33 | 123 |
| MS.gene44490.t1 | AT1G20270 | 40.310 | 129 | 72 | 4 | 86 | 213 | 77 | 201 | 1.10e-25 | 101 |
| MS.gene44490.t1 | AT1G20270 | 40.310 | 129 | 72 | 4 | 86 | 213 | 77 | 201 | 1.10e-25 | 101 |
| MS.gene44490.t1 | AT4G25600 | 26.296 | 270 | 151 | 9 | 28 | 288 | 7 | 237 | 3.33e-18 | 83.2 |
| MS.gene44490.t1 | AT4G25600 | 26.442 | 208 | 114 | 6 | 88 | 288 | 1 | 176 | 1.87e-15 | 74.3 |
| MS.gene44490.t1 | AT4G25600 | 26.601 | 203 | 110 | 6 | 93 | 288 | 3 | 173 | 6.81e-15 | 72.8 |
| MS.gene44490.t1 | AT4G25600 | 26.601 | 203 | 110 | 6 | 93 | 288 | 15 | 185 | 7.41e-15 | 72.8 |
Find 71 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTCAGCAGTTGCAAAATT+TGG | 0.148059 | 8.1:+25849649 | None:intergenic |
| GGTGTGTTTATTAGTGCTTC+TGG | 0.184028 | 8.1:-25849088 | MS.gene44490:CDS |
| TGCATCTTCTTCTTCCTTGC+TGG | 0.220163 | 8.1:-25850970 | MS.gene44490:CDS |
| GCATTCAATCCTGACGAATA+TGG | 0.227123 | 8.1:-25847212 | MS.gene44490:CDS |
| GGGAGCTGCCCTGTGATAAA+AGG | 0.274529 | 8.1:-25845710 | MS.gene44490:CDS |
| GTGTGTTTATTAGTGCTTCT+GGG | 0.312043 | 8.1:-25849087 | MS.gene44490:CDS |
| AAACAGTTAAATCATCAAAT+TGG | 0.319443 | 8.1:-25851038 | MS.gene44490:CDS |
| TTACAGGATGGTGATGGATA+TGG | 0.322042 | 8.1:-25850689 | MS.gene44490:intron |
| TTCTTCCTTGCTGGTTTCTT+CGG | 0.326739 | 8.1:-25850961 | MS.gene44490:CDS |
| CGAGACTATGTTTCCATTTG+AGG | 0.336255 | 8.1:-25846779 | MS.gene44490:intron |
| ACCTGATCGATTGTCCCGTT+GGG | 0.343227 | 8.1:+25845956 | None:intergenic |
| AAACTTGATATTACCTCAAA+TGG | 0.356088 | 8.1:+25846766 | None:intergenic |
| TTGATGACTGCTGGAGAGTT+TGG | 0.381177 | 8.1:-25850614 | MS.gene44490:CDS |
| GAATCAAGCAGCCTCGTTCT+CGG | 0.417673 | 8.1:+25850659 | None:intergenic |
| ACAAAACCACGCACCTGAAA+AGG | 0.434398 | 8.1:+25850569 | None:intergenic |
| CATTCAATCCTGACGAATAT+GGG | 0.435240 | 8.1:-25847211 | MS.gene44490:CDS |
| TTTATTCACTGCTCCCCAAC+GGG | 0.436604 | 8.1:-25845970 | MS.gene44490:CDS |
| ATCATCATTGGCTTTGCGTA+AGG | 0.443535 | 8.1:-25849584 | MS.gene44490:CDS |
| GGATAAAACAAAGACTTTAG+AGG | 0.450663 | 8.1:-25849065 | MS.gene44490:CDS |
| AACCTGATCGATTGTCCCGT+TGG | 0.452449 | 8.1:+25845955 | None:intergenic |
| GGAGCTGCCCTGTGATAAAA+GGG | 0.471964 | 8.1:-25845709 | MS.gene44490:CDS |
| GGGTGGCAACGAAGTGGATA+AGG | 0.477793 | 8.1:-25845679 | MS.gene44490:CDS |
| CTGAAAAGGAATCGATGTAA+TGG | 0.477889 | 8.1:+25850583 | None:intergenic |
| AAGTATAATTTGATGACTGC+TGG | 0.482044 | 8.1:-25850623 | MS.gene44490:CDS |
| ATACCTTGTTCTAATTCCCT+TGG | 0.486870 | 8.1:+25849543 | None:intergenic |
| CGAGAGCAACAATGATTCCT+AGG | 0.487275 | 8.1:-25849024 | MS.gene44490:CDS |
| TTACGCAAAGCCAATGATGA+TGG | 0.495399 | 8.1:+25849586 | None:intergenic |
| GGAAGAAGAAGATGCATATG+AGG | 0.496237 | 8.1:+25850977 | None:intergenic |
| CCCCAACGGGACAATCGATC+AGG | 0.497692 | 8.1:-25845957 | MS.gene44490:intron |
| AGGACTCAAACCATCATCAT+TGG | 0.500450 | 8.1:-25849596 | MS.gene44490:CDS |
| GTTACCTCTCCATGACTCCT+AGG | 0.504007 | 8.1:+25849007 | None:intergenic |
| TTTAAGAGTAAAGCCAAGAC+AGG | 0.509971 | 8.1:-25846008 | MS.gene44490:CDS |
| CTTTGGCAGACATCATTGCA+TGG | 0.515129 | 8.1:-25845731 | MS.gene44490:intron |
| ATAGTTTCTGTGGCAAAGGC+AGG | 0.519985 | 8.1:-25849616 | MS.gene44490:CDS |
| TTTGGCAGACATCATTGCAT+GGG | 0.538989 | 8.1:-25845730 | MS.gene44490:intron |
| AAAGACTTTAGAGGCCATTG+AGG | 0.549241 | 8.1:-25849056 | MS.gene44490:CDS |
| ACAATGATTCCTAGGAGTCA+TGG | 0.552565 | 8.1:-25849016 | MS.gene44490:CDS |
| TCATCATTGGCTTTGCGTAA+GGG | 0.554646 | 8.1:-25849583 | MS.gene44490:CDS |
| ATGCATATGAGGAAAACGTA+AGG | 0.561296 | 8.1:+25850988 | None:intergenic |
| TCGAACATGGATGGTAGCTA+TGG | 0.566649 | 8.1:-25846049 | MS.gene44490:CDS |
| TGTGTTTATTAGTGCTTCTG+GGG | 0.569933 | 8.1:-25849086 | MS.gene44490:CDS |
| CAGAATGGCTCGAACATGGA+TGG | 0.572427 | 8.1:-25846058 | MS.gene44490:CDS |
| AAACATAGTTTCTGTGGCAA+AGG | 0.573162 | 8.1:-25849620 | MS.gene44490:CDS |
| AGAAGTGGGTGGCAACGAAG+TGG | 0.582684 | 8.1:-25845685 | MS.gene44490:CDS |
| TCTGCAGAATGGCTCGAACA+TGG | 0.586068 | 8.1:-25846062 | MS.gene44490:intron |
| ATGTGAAAACATAGTTTCTG+TGG | 0.587060 | 8.1:-25849626 | MS.gene44490:CDS |
| TATGGCTACGAAGACTGCGT+TGG | 0.590047 | 8.1:-25846031 | MS.gene44490:CDS |
| TTTGGAAAATACAGAGCTCG+TGG | 0.594018 | 8.1:+25849667 | None:intergenic |
| TATTTAACTGATGTTGAGGA+AGG | 0.597718 | 8.1:-25846805 | MS.gene44490:CDS |
| CTGTGATAAAAGGGGAGAAG+TGG | 0.600279 | 8.1:-25845700 | MS.gene44490:CDS |
| TTAACTGATGTTGAGGAAGG+CGG | 0.603232 | 8.1:-25846802 | MS.gene44490:CDS |
| TTTGACCGACTTCATAGCGT+AGG | 0.606276 | 8.1:+25847255 | None:intergenic |
| AAGGAATCTAGATCAAGAAG+AGG | 0.613538 | 8.1:-25845660 | MS.gene44490:CDS |
| TTAAGAGTAAAGCCAAGACA+GGG | 0.614135 | 8.1:-25846007 | MS.gene44490:CDS |
| TGTGATAAAAGGGGAGAAGT+GGG | 0.616405 | 8.1:-25845699 | MS.gene44490:CDS |
| CCTGATCGATTGTCCCGTTG+GGG | 0.617977 | 8.1:+25845957 | None:intergenic |
| TGCATATGAGGAAAACGTAA+GGG | 0.619030 | 8.1:+25850989 | None:intergenic |
| AATATCCTACGCTATGAAGT+CGG | 0.643457 | 8.1:-25847260 | MS.gene44490:CDS |
| ATGAACCGAAGAAACCAGCA+AGG | 0.650368 | 8.1:+25850956 | None:intergenic |
| AGAAACTGCGGAGAATACCA+AGG | 0.661441 | 8.1:-25849560 | MS.gene44490:CDS |
| ATGGATTGAGACCGAGAACG+AGG | 0.662269 | 8.1:-25850670 | MS.gene44490:CDS |
| GCTGTATTTAACTGATGTTG+AGG | 0.662285 | 8.1:-25846809 | MS.gene44490:CDS |
| AAGAGTAAAGCCAAGACAGG+GGG | 0.667124 | 8.1:-25846005 | MS.gene44490:CDS |
| ATACCAAGGGAATTAGAACA+AGG | 0.674307 | 8.1:-25849546 | MS.gene44490:intron |
| GATAAAAGGGGAGAAGTGGG+TGG | 0.678514 | 8.1:-25845696 | MS.gene44490:CDS |
| GATTCCTAGGAGTCATGGAG+AGG | 0.681493 | 8.1:-25849011 | MS.gene44490:intron |
| GAGGCTGCTTGATTCGACGA+AGG | 0.692164 | 8.1:-25850651 | MS.gene44490:CDS |
| GAAACTGCGGAGAATACCAA+GGG | 0.707856 | 8.1:-25849559 | MS.gene44490:CDS |
| TTTGCGTAAGGGAGAAACTG+CGG | 0.711129 | 8.1:-25849572 | MS.gene44490:CDS |
| TAAGAGTAAAGCCAAGACAG+GGG | 0.719014 | 8.1:-25846006 | MS.gene44490:CDS |
| GAGCTGCCCTGTGATAAAAG+GGG | 0.732119 | 8.1:-25845708 | MS.gene44490:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAATATATTATTAGAATT+TGG | - | chr8.1:25847335-25847354 | MS.gene44490:intron | 10.0% |
| !! | AAGTATAACAATAAAAAAAA+TGG | + | chr8.1:25849712-25849731 | None:intergenic | 10.0% |
| !! | TAAAAAAAATACACTAATAA+TGG | + | chr8.1:25850187-25850206 | None:intergenic | 10.0% |
| !!! | TTTTGTTTTTAAATTTTCTT+AGG | + | chr8.1:25847952-25847971 | None:intergenic | 10.0% |
| !!! | TTTTTGTAAATTGTAATATA+TGG | - | chr8.1:25850434-25850453 | MS.gene44490:intron | 10.0% |
| !! | ATATATTATTAGAATTTGGA+AGG | - | chr8.1:25847339-25847358 | MS.gene44490:intron | 15.0% |
| !! | TCTAATAATATATTCTTTCT+AGG | + | chr8.1:25847332-25847351 | None:intergenic | 15.0% |
| !!! | AAAATGTGTTTTTTTTTGTT+TGG | + | chr8.1:25846555-25846574 | None:intergenic | 15.0% |
| !!! | AACTATTGAATTTGAAATAT+AGG | - | chr8.1:25849301-25849320 | MS.gene44490:intron | 15.0% |
| !!! | ATAACTATTTTTAAACTTTC+AGG | - | chr8.1:25846748-25846767 | MS.gene44490:intron | 15.0% |
| !!! | CAAAAGAATATTTCTATATT+TGG | - | chr8.1:25846789-25846808 | MS.gene44490:CDS | 15.0% |
| !! | AAACAGTTAAATCATCAAAT+TGG | - | chr8.1:25845662-25845681 | MS.gene44490:CDS | 20.0% |
| !! | AAAGTTAGAATTGCTAAATA+TGG | + | chr8.1:25846309-25846328 | None:intergenic | 20.0% |
| !! | AACAAACAAATATTCTTGTA+AGG | + | chr8.1:25848204-25848223 | None:intergenic | 20.0% |
| !! | AAGTATTTAGTACAATAGAA+AGG | - | chr8.1:25848636-25848655 | MS.gene44490:intron | 20.0% |
| !! | ACGATTATTTGTAATTAAGA+TGG | - | chr8.1:25849586-25849605 | MS.gene44490:CDS | 20.0% |
| !! | ATTTGTATGTATTCTTTCTT+TGG | - | chr8.1:25850952-25850971 | MS.gene44490:CDS | 20.0% |
| !! | GAAAAATGTTATAGTTTACA+TGG | - | chr8.1:25850335-25850354 | MS.gene44490:intron | 20.0% |
| !! | TCCTTAATAAGTAACTTAAA+AGG | + | chr8.1:25846578-25846597 | None:intergenic | 20.0% |
| !! | TTGTTATACTTAAAAGTTGT+TGG | - | chr8.1:25849721-25849740 | MS.gene44490:intron | 20.0% |
| !!! | AAATTTGTGTTAGCATTTTT+AGG | - | chr8.1:25850524-25850543 | MS.gene44490:intron | 20.0% |
| !!! | AAGACTTTAATTTTAGCTAA+TGG | - | chr8.1:25848141-25848160 | MS.gene44490:intron | 20.0% |
| !!! | ACTAAATTATTGGATTAGAT+TGG | - | chr8.1:25850224-25850243 | MS.gene44490:intron | 20.0% |
| !!! | ATATTTCTATATTTGGTTCT+TGG | - | chr8.1:25846796-25846815 | MS.gene44490:CDS | 20.0% |
| !!! | ATTTTGATGTGAATGAAATT+CGG | - | chr8.1:25846644-25846663 | MS.gene44490:intron | 20.0% |
| !!! | GAAATTTGGAGTTTTTTATT+TGG | - | chr8.1:25846499-25846518 | MS.gene44490:intron | 20.0% |
| !!! | GATGTAAATAATGTTTTGAT+AGG | - | chr8.1:25850161-25850180 | MS.gene44490:intron | 20.0% |
| !!! | TAATTATTGTTTTGGAGTTT+AGG | - | chr8.1:25846439-25846458 | MS.gene44490:intron | 20.0% |
| !!! | TATTAAATCAGAAACAGTTT+TGG | - | chr8.1:25848576-25848595 | MS.gene44490:intron | 20.0% |
| !!! | TATTTCTATATTTGGTTCTT+GGG | - | chr8.1:25846797-25846816 | MS.gene44490:CDS | 20.0% |
| !!! | TCATGTTCTTTTAAACATAA+GGG | - | chr8.1:25849234-25849253 | MS.gene44490:intron | 20.0% |
| !!! | TCCTTTTAAGTTACTTATTA+AGG | - | chr8.1:25846574-25846593 | MS.gene44490:intron | 20.0% |
| !!! | TTTAATAATGTCATCAGTTT+TGG | + | chr8.1:25848563-25848582 | None:intergenic | 20.0% |
| !!! | TTTTTTTTAGCTTGAATACA+CGG | + | chr8.1:25848493-25848512 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTCTTTGACCAA+TGG | + | chr8.1:25850135-25850154 | None:intergenic | 20.0% |
| ! | AACTTGTATCATTATACTGT+AGG | - | chr8.1:25849764-25849783 | MS.gene44490:intron | 25.0% |
| ! | AATGTGAATTAGTGGAAATT+TGG | - | chr8.1:25846485-25846504 | MS.gene44490:intron | 25.0% |
| ! | ACTTAAGTATTTAGCTGAAT+AGG | - | chr8.1:25846268-25846287 | MS.gene44490:intron | 25.0% |
| ! | ACTTGTATCATTATACTGTA+GGG | - | chr8.1:25849765-25849784 | MS.gene44490:intron | 25.0% |
| ! | AGCAAAAGCTACTAAATTAT+TGG | - | chr8.1:25850214-25850233 | MS.gene44490:intron | 25.0% |
| ! | AGTTTAAGCTTACAAAACAA+CGG | + | chr8.1:25849285-25849304 | None:intergenic | 25.0% |
| ! | ATTCAAGCTAAAAAAAACAG+CGG | - | chr8.1:25848496-25848515 | MS.gene44490:intron | 25.0% |
| ! | CTCCAAAACAATAATTATAC+AGG | + | chr8.1:25846436-25846455 | None:intergenic | 25.0% |
| ! | GAAATTTGATTAAATGCATG+TGG | + | chr8.1:25848278-25848297 | None:intergenic | 25.0% |
| ! | GATAATTAATCTCTTGAATC+TGG | + | chr8.1:25847997-25848016 | None:intergenic | 25.0% |
| ! | GATCTTTAATCAATTAACAC+AGG | + | chr8.1:25846839-25846858 | None:intergenic | 25.0% |
| ! | TAATCCTTGTATATGTACAT+CGG | + | chr8.1:25850097-25850116 | None:intergenic | 25.0% |
| ! | TACTTAACAAGTGACTTAAA+AGG | + | chr8.1:25846699-25846718 | None:intergenic | 25.0% |
| ! | TAGAAGAAAAACAACACTAA+CGG | + | chr8.1:25850773-25850792 | None:intergenic | 25.0% |
| ! | TAGACTTTAATGTGAATTAG+TGG | - | chr8.1:25846477-25846496 | MS.gene44490:intron | 25.0% |
| ! | TAGGAACTAAAATGATAAAG+TGG | - | chr8.1:25848325-25848344 | MS.gene44490:intron | 25.0% |
| ! | TATCTCCACAAATATCTATT+TGG | + | chr8.1:25848302-25848321 | None:intergenic | 25.0% |
| ! | TTTCACCAAATAGATATTTG+TGG | - | chr8.1:25848294-25848313 | MS.gene44490:intron | 25.0% |
| !! | AATGAGCGAAAATTTGAAAT+TGG | - | chr8.1:25846942-25846961 | MS.gene44490:intron | 25.0% |
| !! | AGCCTGTATAATTATTGTTT+TGG | - | chr8.1:25846431-25846450 | MS.gene44490:intron | 25.0% |
| !! | ATATTTGAAGTAGAATAGCT+AGG | - | chr8.1:25850366-25850385 | MS.gene44490:intron | 25.0% |
| !! | ATTTGTAATCCTCTCATTTT+TGG | - | chr8.1:25849373-25849392 | MS.gene44490:intron | 25.0% |
| !! | CATGTTCTTTTAAACATAAG+GGG | - | chr8.1:25849235-25849254 | MS.gene44490:intron | 25.0% |
| !! | CTTCACAAAAAAAGTATGTA+CGG | - | chr8.1:25847287-25847306 | MS.gene44490:intron | 25.0% |
| !! | GAAAAAAGTGCAAGTATTTA+AGG | + | chr8.1:25848102-25848121 | None:intergenic | 25.0% |
| !! | GATATTTGTGGAGATATTTT+AGG | - | chr8.1:25848306-25848325 | MS.gene44490:intron | 25.0% |
| !! | GTCATGTTCTTTTAAACATA+AGG | - | chr8.1:25849233-25849252 | MS.gene44490:intron | 25.0% |
| !! | TAAAAGTACGATTTCCTTAA+AGG | + | chr8.1:25849160-25849179 | None:intergenic | 25.0% |
| !! | TTTTCTCTGTTTAGCAAAAT+TGG | - | chr8.1:25847860-25847879 | MS.gene44490:intron | 25.0% |
| !!! | AGTTAACCATTTGATTTTGT+CGG | + | chr8.1:25847249-25847268 | None:intergenic | 25.0% |
| !!! | ATATGTTGTCTGTGTTTTTT+AGG | - | chr8.1:25846996-25847015 | MS.gene44490:intron | 25.0% |
| !!! | ATTGTTATGTTTTTACAGGA+TGG | - | chr8.1:25845999-25846018 | MS.gene44490:CDS | 25.0% |
| !!! | GATTTTTTGCTTGTATTGTA+TGG | + | chr8.1:25849793-25849812 | None:intergenic | 25.0% |
| !!! | TCTAGGCTAAAAGTATTATT+TGG | - | chr8.1:25849180-25849199 | MS.gene44490:intron | 25.0% |
| !!! | TGTAACATAATGTCGATTTT+AGG | + | chr8.1:25847541-25847560 | None:intergenic | 25.0% |
| !!! | TTTGTAATCCTCTCATTTTT+GGG | - | chr8.1:25849374-25849393 | MS.gene44490:intron | 25.0% |
| AAATCAATGAAATTGAGGAG+TGG | + | chr8.1:25849980-25849999 | None:intergenic | 30.0% | |
| AATCAATGAAATTGAGGAGT+GGG | + | chr8.1:25849979-25849998 | None:intergenic | 30.0% | |
| AATTAATTCTTCAGACCTTG+AGG | + | chr8.1:25848848-25848867 | None:intergenic | 30.0% | |
| ATGTGAAAACATAGTTTCTG+TGG | - | chr8.1:25847074-25847093 | MS.gene44490:intron | 30.0% | |
| GAAATTCGGAATTTGTCATT+AGG | - | chr8.1:25846658-25846677 | MS.gene44490:intron | 30.0% | |
| GATATTAAATGCCTGAAACA+TGG | + | chr8.1:25849426-25849445 | None:intergenic | 30.0% | |
| GATTTCCTTAAAGGAAAACT+TGG | + | chr8.1:25849151-25849170 | None:intergenic | 30.0% | |
| GCAAGTTTATATAAAACGTG+AGG | - | chr8.1:25847370-25847389 | MS.gene44490:intron | 30.0% | |
| GGATAAAACAAAGACTTTAG+AGG | - | chr8.1:25847635-25847654 | MS.gene44490:intron | 30.0% | |
| GTGGTAAAAAATTACACTGA+CGG | + | chr8.1:25848259-25848278 | None:intergenic | 30.0% | |
| GTGTATAATAGGAATGCTAT+AGG | + | chr8.1:25848044-25848063 | None:intergenic | 30.0% | |
| GTGTTAAGCGTATATTCTAA+TGG | - | chr8.1:25846860-25846879 | MS.gene44490:intron | 30.0% | |
| TAAAAACCACATATATGACG+AGG | + | chr8.1:25850550-25850569 | None:intergenic | 30.0% | |
| TATTTAACTGATGTTGAGGA+AGG | - | chr8.1:25849895-25849914 | MS.gene44490:intron | 30.0% | |
| TGAATCAACGATTATTACTC+AGG | + | chr8.1:25850800-25850819 | None:intergenic | 30.0% | |
| TTAAGCGTATATTCTAATGG+AGG | - | chr8.1:25846863-25846882 | MS.gene44490:intron | 30.0% | |
| TTGTTTGGTAGATGACTTAA+AGG | + | chr8.1:25846540-25846559 | None:intergenic | 30.0% | |
| TTTAGCACATTAGATTGTCA+AGG | + | chr8.1:25847767-25847786 | None:intergenic | 30.0% | |
| TTTCATAGGAAGTAACTCAT+GGG | - | chr8.1:25845974-25845993 | MS.gene44490:CDS | 30.0% | |
| TTTGACCAATGGCAAAATAT+TGG | + | chr8.1:25850124-25850143 | None:intergenic | 30.0% | |
| ! | AAAACGTGAGGTATCATTAT+AGG | - | chr8.1:25847382-25847401 | MS.gene44490:intron | 30.0% |
| ! | AAGTATAATTTGATGACTGC+TGG | - | chr8.1:25846077-25846096 | MS.gene44490:intron | 30.0% |
| ! | AGGAAATCGTACTTTTATCT+AGG | - | chr8.1:25849163-25849182 | MS.gene44490:intron | 30.0% |
| ! | ATGAATCTGACAGAGATTTT+CGG | - | chr8.1:25847467-25847486 | MS.gene44490:intron | 30.0% |
| ! | GATTATTTTCTATGCACTGA+CGG | + | chr8.1:25848396-25848415 | None:intergenic | 30.0% |
| ! | TTTTCATCAATGTTCGAAAC+AGG | + | chr8.1:25850320-25850339 | None:intergenic | 30.0% |
| ! | TTTTGCATAACTACCAGTAA+CGG | + | chr8.1:25848072-25848091 | None:intergenic | 30.0% |
| !! | AATTAGAACAAGGTATTGTG+TGG | - | chr8.1:25847164-25847183 | MS.gene44490:intron | 30.0% |
| !! | ACTACAGCTTTTTAAAGATG+AGG | + | chr8.1:25849215-25849234 | None:intergenic | 30.0% |
| !! | ATCTTTTGTTTAAACAGCTC+TGG | - | chr8.1:25847591-25847610 | MS.gene44490:intron | 30.0% |
| !! | ATTAGAACAAGGTATTGTGT+GGG | - | chr8.1:25847165-25847184 | MS.gene44490:intron | 30.0% |
| !! | CAGAGAATTACTTTTCTTAG+AGG | - | chr8.1:25848972-25848991 | MS.gene44490:intron | 30.0% |
| !! | GGTGATTGTTATGTTTTTAC+AGG | - | chr8.1:25845995-25846014 | MS.gene44490:CDS | 30.0% |
| !! | GTTAACCATTTGATTTTGTC+GGG | + | chr8.1:25847248-25847267 | None:intergenic | 30.0% |
| !! | TCTTTTGCTGAATGTTGTTT+TGG | - | chr8.1:25846171-25846190 | MS.gene44490:intron | 30.0% |
| !! | TGCATTTCTAGCTATGATAA+AGG | - | chr8.1:25847820-25847839 | MS.gene44490:intron | 30.0% |
| !! | TTGTAATCCTCTCATTTTTG+GGG | - | chr8.1:25849375-25849394 | MS.gene44490:intron | 30.0% |
| AAAATCACCCCAAAAATGAG+AGG | + | chr8.1:25849385-25849404 | None:intergenic | 35.0% | |
| AAACATAGTTTCTGTGGCAA+AGG | - | chr8.1:25847080-25847099 | MS.gene44490:intron | 35.0% | |
| AAGGAATCTAGATCAAGAAG+AGG | - | chr8.1:25851040-25851059 | MS.gene44490:CDS | 35.0% | |
| AATATCCTACGCTATGAAGT+CGG | - | chr8.1:25849440-25849459 | MS.gene44490:intron | 35.0% | |
| AGATTAATTATCCTCACACC+AGG | - | chr8.1:25848005-25848024 | MS.gene44490:intron | 35.0% | |
| ATACCAAGGGAATTAGAACA+AGG | - | chr8.1:25847154-25847173 | MS.gene44490:intron | 35.0% | |
| ATACCTTGTTCTAATTCCCT+TGG | + | chr8.1:25847160-25847179 | None:intergenic | 35.0% | |
| ATGAAGCCCAAATACTCTTA+CGG | + | chr8.1:25850601-25850620 | None:intergenic | 35.0% | |
| ATGCATATGAGGAAAACGTA+AGG | + | chr8.1:25845715-25845734 | None:intergenic | 35.0% | |
| ATGTGACTTTGATTCCCATA+AGG | + | chr8.1:25848177-25848196 | None:intergenic | 35.0% | |
| ATTACAAAAAGTGAGAGCCT+AGG | + | chr8.1:25849030-25849049 | None:intergenic | 35.0% | |
| CACAAAATTGTTCTGCAGAA+TGG | - | chr8.1:25850627-25850646 | MS.gene44490:CDS | 35.0% | |
| CAGCATTCCATTATCTACAA+TGG | - | chr8.1:25849081-25849100 | MS.gene44490:CDS | 35.0% | |
| CATTCAATCCTGACGAATAT+GGG | - | chr8.1:25849489-25849508 | MS.gene44490:intron | 35.0% | |
| CGCGACTCAACATAATATAA+TGG | + | chr8.1:25850870-25850889 | None:intergenic | 35.0% | |
| CTCTGTTTAGCAAAATTGGT+GGG | - | chr8.1:25847864-25847883 | MS.gene44490:intron | 35.0% | |
| CTGAAAAGGAATCGATGTAA+TGG | + | chr8.1:25846120-25846139 | None:intergenic | 35.0% | |
| CTGAAGAATTACCATGTTTC+AGG | - | chr8.1:25849412-25849431 | MS.gene44490:intron | 35.0% | |
| GATTAATTATCCTCACACCA+GGG | - | chr8.1:25848006-25848025 | MS.gene44490:intron | 35.0% | |
| GCAGGAAATCAATGAAATTG+AGG | + | chr8.1:25849985-25850004 | None:intergenic | 35.0% | |
| GCTGTATTTAACTGATGTTG+AGG | - | chr8.1:25849891-25849910 | MS.gene44490:intron | 35.0% | |
| GCTTCATGTAACGTTTCAAA+AGG | - | chr8.1:25848782-25848801 | MS.gene44490:intron | 35.0% | |
| GTCGTATCCATTGTAGATAA+TGG | + | chr8.1:25849091-25849110 | None:intergenic | 35.0% | |
| GTGTGTTTATTAGTGCTTCT+GGG | - | chr8.1:25847613-25847632 | MS.gene44490:intron | 35.0% | |
| GTTTCATAGGAAGTAACTCA+TGG | - | chr8.1:25845973-25845992 | MS.gene44490:CDS | 35.0% | |
| TAACGGCTTGTGTGTATAAT+AGG | + | chr8.1:25848055-25848074 | None:intergenic | 35.0% | |
| TACTCCGATGTACATATACA+AGG | - | chr8.1:25850090-25850109 | MS.gene44490:intron | 35.0% | |
| TCTCTGTTTAGCAAAATTGG+TGG | - | chr8.1:25847863-25847882 | MS.gene44490:intron | 35.0% | |
| TGCATATGAGGAAAACGTAA+GGG | + | chr8.1:25845714-25845733 | None:intergenic | 35.0% | |
| TGTGTTTATTAGTGCTTCTG+GGG | - | chr8.1:25847614-25847633 | MS.gene44490:intron | 35.0% | |
| TGTTCAGCAGTTGCAAAATT+TGG | + | chr8.1:25847054-25847073 | None:intergenic | 35.0% | |
| TTAAGAGTAAAGCCAAGACA+GGG | - | chr8.1:25850693-25850712 | MS.gene44490:intron | 35.0% | |
| TTAGATTGTCAAGGTCATAC+AGG | + | chr8.1:25847758-25847777 | None:intergenic | 35.0% | |
| TTTAAGAGTAAAGCCAAGAC+AGG | - | chr8.1:25850692-25850711 | MS.gene44490:intron | 35.0% | |
| ! | AATTCTGAAAAGCTCTAACC+AGG | + | chr8.1:25850275-25850294 | None:intergenic | 35.0% |
| ! | ATCCTCCAATATTTTGCCAT+TGG | - | chr8.1:25850116-25850135 | MS.gene44490:intron | 35.0% |
| ! | ATTTTAGGCAAACTGTACAG+AGG | + | chr8.1:25847526-25847545 | None:intergenic | 35.0% |
| ! | GGTTTGCTTCAAATTAACTC+TGG | - | chr8.1:25846884-25846903 | MS.gene44490:intron | 35.0% |
| ! | TACTTTTCTTAGAGGAACTG+AGG | - | chr8.1:25848980-25848999 | MS.gene44490:intron | 35.0% |
| ! | TTTAGTTCACACATACCCTT+TGG | + | chr8.1:25849526-25849545 | None:intergenic | 35.0% |
| !! | AATGGTCTTATGCATCCTTA+TGG | - | chr8.1:25848159-25848178 | MS.gene44490:intron | 35.0% |
| !! | ATGGTCTTATGCATCCTTAT+GGG | - | chr8.1:25848160-25848179 | MS.gene44490:intron | 35.0% |
| !! | ATGTTTTTACAGGATGGTGA+TGG | - | chr8.1:25846005-25846024 | MS.gene44490:CDS | 35.0% |
| !! | CGTCTTTTTGAGAATTGAGT+TGG | - | chr8.1:25848870-25848889 | MS.gene44490:intron | 35.0% |
| !! | GTTGTTGGCTTAGTTGAAAT+TGG | - | chr8.1:25846202-25846221 | MS.gene44490:intron | 35.0% |
| !!! | ACATACCCTTTGGCTTTTTT+GGG | + | chr8.1:25849516-25849535 | None:intergenic | 35.0% |
| !!! | ATTTTGATTGAGAATGCAGG+TGG | - | chr8.1:25849858-25849877 | MS.gene44490:intron | 35.0% |
| !!! | CAGATTTTGATTGAGAATGC+AGG | - | chr8.1:25849855-25849874 | MS.gene44490:intron | 35.0% |
| !!! | CATTACATCGATTCCTTTTC+AGG | - | chr8.1:25846118-25846137 | MS.gene44490:intron | 35.0% |
| !!! | GTGTTTTTTAGGTTTTGAGC+TGG | - | chr8.1:25847007-25847026 | MS.gene44490:intron | 35.0% |
| !!! | GTTTTGGTTGTGAATGTTGT+TGG | - | chr8.1:25846187-25846206 | MS.gene44490:intron | 35.0% |
| AACTTTGTTAACCGCAACTG+AGG | - | chr8.1:25849331-25849350 | MS.gene44490:intron | 40.0% | |
| ACAATGATTCCTAGGAGTCA+TGG | - | chr8.1:25847684-25847703 | MS.gene44490:intron | 40.0% | |
| ACAGACCCGACAAAATCAAA+TGG | - | chr8.1:25847240-25847259 | MS.gene44490:CDS | 40.0% | |
| AGCATACATGTGACATGTCT+TGG | + | chr8.1:25845883-25845902 | None:intergenic | 40.0% | |
| AGCTGAATCACCAACAGAAT+TGG | - | chr8.1:25848534-25848553 | MS.gene44490:intron | 40.0% | |
| AGCTTGAATACACGGAATAC+CGG | + | chr8.1:25848485-25848504 | None:intergenic | 40.0% | |
| AGGACTCAAACCATCATCAT+TGG | - | chr8.1:25847104-25847123 | MS.gene44490:intron | 40.0% | |
| AGTACCTCGTGTAATAAGTG+AGG | - | chr8.1:25848807-25848826 | MS.gene44490:intron | 40.0% | |
| ATAGAAAGGCTTGACTGTTG+AGG | - | chr8.1:25848650-25848669 | MS.gene44490:intron | 40.0% | |
| ATAGGATTAAGTTCATGCCC+TGG | + | chr8.1:25848026-25848045 | None:intergenic | 40.0% | |
| CAAAGCTGAGATGAGGAAAA+TGG | + | chr8.1:25848710-25848729 | None:intergenic | 40.0% | |
| CAACTTTGTTAGAGGAAGCA+GGG | - | chr8.1:25848893-25848912 | MS.gene44490:intron | 40.0% | |
| CATCGAGAGACTACATGATA+GGG | - | chr8.1:25849649-25849668 | MS.gene44490:CDS | 40.0% | |
| CGAGACTATGTTTCCATTTG+AGG | - | chr8.1:25849921-25849940 | MS.gene44490:intron | 40.0% | |
| CGAGCTCATTAACATGTGTT+TGG | + | chr8.1:25849823-25849842 | None:intergenic | 40.0% | |
| CTGAATCACCAACAGAATTG+GGG | - | chr8.1:25848536-25848555 | MS.gene44490:intron | 40.0% | |
| CTGCAAAAAAATGACCCAAG+TGG | + | chr8.1:25848955-25848974 | None:intergenic | 40.0% | |
| GACCAATGGCAAAATATTGG+AGG | + | chr8.1:25850121-25850140 | None:intergenic | 40.0% | |
| GCATCGTGTTGTGATTTGAT+TGG | - | chr8.1:25848347-25848366 | MS.gene44490:intron | 40.0% | |
| GCATTCAATCCTGACGAATA+TGG | - | chr8.1:25849488-25849507 | MS.gene44490:intron | 40.0% | |
| GCTGAATCACCAACAGAATT+GGG | - | chr8.1:25848535-25848554 | MS.gene44490:intron | 40.0% | |
| GGAAGAAGAAGATGCATATG+AGG | + | chr8.1:25845726-25845745 | None:intergenic | 40.0% | |
| GGTGTGTTTATTAGTGCTTC+TGG | - | chr8.1:25847612-25847631 | MS.gene44490:intron | 40.0% | |
| GTGGGTGAGTTATTATGAAC+TGG | - | chr8.1:25847183-25847202 | MS.gene44490:intron | 40.0% | |
| GTTGCGGTTAACAAAGTTCA+AGG | + | chr8.1:25849329-25849348 | None:intergenic | 40.0% | |
| TAAGAGTAAAGCCAAGACAG+GGG | - | chr8.1:25850694-25850713 | MS.gene44490:intron | 40.0% | |
| TAATGTGTCAGTGTCGTGTT+TGG | - | chr8.1:25845936-25845955 | MS.gene44490:intron | 40.0% | |
| TATTTGAACCTTAGACCTCC+TGG | - | chr8.1:25850254-25850273 | MS.gene44490:intron | 40.0% | |
| TCAGCAAAAGACTCGAATGT+TGG | + | chr8.1:25846162-25846181 | None:intergenic | 40.0% | |
| TCATCGAGAGACTACATGAT+AGG | - | chr8.1:25849648-25849667 | MS.gene44490:CDS | 40.0% | |
| TGAACTGGACTATGCAAGAA+TGG | - | chr8.1:25847198-25847217 | MS.gene44490:CDS | 40.0% | |
| TGTGATAAAAGGGGAGAAGT+GGG | - | chr8.1:25851001-25851020 | MS.gene44490:CDS | 40.0% | |
| TTAACTGATGTTGAGGAAGG+CGG | - | chr8.1:25849898-25849917 | MS.gene44490:intron | 40.0% | |
| TTACGCAAAGCCAATGATGA+TGG | + | chr8.1:25847117-25847136 | None:intergenic | 40.0% | |
| TTATACACACAAGCCGTTAC+TGG | - | chr8.1:25848056-25848075 | MS.gene44490:intron | 40.0% | |
| TTTAGGCCTCGTCATATATG+TGG | - | chr8.1:25850541-25850560 | MS.gene44490:intron | 40.0% | |
| TTTGGAAAATACAGAGCTCG+TGG | + | chr8.1:25847036-25847055 | None:intergenic | 40.0% | |
| TTTGGCAGACATCATTGCAT+GGG | - | chr8.1:25850970-25850989 | MS.gene44490:CDS | 40.0% | |
| ! | AAAGACTTTAGAGGCCATTG+AGG | - | chr8.1:25847644-25847663 | MS.gene44490:intron | 40.0% |
| ! | ACTGTTACGGAAGGAGTTTT+AGG | - | chr8.1:25849123-25849142 | MS.gene44490:intron | 40.0% |
| ! | ACTTCTCCCCTTTTATCACA+GGG | + | chr8.1:25851001-25851020 | None:intergenic | 40.0% |
| ! | AGGCACCAAGTTTTCCTTTA+AGG | - | chr8.1:25849143-25849162 | MS.gene44490:intron | 40.0% |
| ! | ATCATAAAGCACCTCAGTTG+CGG | + | chr8.1:25849345-25849364 | None:intergenic | 40.0% |
| ! | ATCTCTTTTCTCTCACTCTC+AGG | - | chr8.1:25845765-25845784 | MS.gene44490:intron | 40.0% |
| ! | TCTCGCAATTTTCTCCTCAA+TGG | + | chr8.1:25847661-25847680 | None:intergenic | 40.0% |
| ! | TGAGTTGGCAACTTTGTTAG+AGG | - | chr8.1:25848885-25848904 | MS.gene44490:intron | 40.0% |
| ! | TTTCCTCATCTCAGCTTTGA+GGG | - | chr8.1:25848711-25848730 | MS.gene44490:intron | 40.0% |
| ! | TTTTATTCACTGCTCCCCAA+CGG | - | chr8.1:25850729-25850748 | MS.gene44490:intron | 40.0% |
| ! | TTTTCCTCATCTCAGCTTTG+AGG | - | chr8.1:25848710-25848729 | MS.gene44490:intron | 40.0% |
| !! | ACTTCGCCGTAAGAGTATTT+GGG | - | chr8.1:25850592-25850611 | MS.gene44490:CDS | 40.0% |
| !! | ATCATCATTGGCTTTGCGTA+AGG | - | chr8.1:25847116-25847135 | MS.gene44490:intron | 40.0% |
| !! | TACTTCGCCGTAAGAGTATT+TGG | - | chr8.1:25850591-25850610 | MS.gene44490:CDS | 40.0% |
| !! | TCATCATTGGCTTTGCGTAA+GGG | - | chr8.1:25847117-25847136 | MS.gene44490:intron | 40.0% |
| !! | TTACAGGATGGTGATGGATA+TGG | - | chr8.1:25846011-25846030 | MS.gene44490:CDS | 40.0% |
| !! | TTCTTCCTTGCTGGTTTCTT+CGG | - | chr8.1:25845739-25845758 | MS.gene44490:intron | 40.0% |
| !!! | AGAAACAGTTTTGGCTAGCA+TGG | - | chr8.1:25848585-25848604 | MS.gene44490:intron | 40.0% |
| !!! | CACATACCCTTTGGCTTTTT+TGG | + | chr8.1:25849517-25849536 | None:intergenic | 40.0% |
| !!! | CATACCCTTTGGCTTTTTTG+GGG | + | chr8.1:25849515-25849534 | None:intergenic | 40.0% |
| AACTCTGGCGAATGATGAAG+TGG | - | chr8.1:25846899-25846918 | MS.gene44490:intron | 45.0% | |
| AAGAGTAAAGCCAAGACAGG+GGG | - | chr8.1:25850695-25850714 | MS.gene44490:intron | 45.0% | |
| AATGTTCGAAACAGGCAGCT+CGG | + | chr8.1:25850312-25850331 | None:intergenic | 45.0% | |
| ACAAAACCACGCACCTGAAA+AGG | + | chr8.1:25846134-25846153 | None:intergenic | 45.0% | |
| ACCTCGTGTAATAAGTGAGG+TGG | - | chr8.1:25848810-25848829 | MS.gene44490:intron | 45.0% | |
| AGAAACTGCGGAGAATACCA+AGG | - | chr8.1:25847140-25847159 | MS.gene44490:intron | 45.0% | |
| AGAGACTACATGATAGGGCT+TGG | - | chr8.1:25849654-25849673 | MS.gene44490:CDS | 45.0% | |
| AGAGGAAGCAGGGTAGTTAT+TGG | - | chr8.1:25848903-25848922 | MS.gene44490:intron | 45.0% | |
| ATAGTTTCTGTGGCAAAGGC+AGG | - | chr8.1:25847084-25847103 | MS.gene44490:intron | 45.0% | |
| ATGAACCGAAGAAACCAGCA+AGG | + | chr8.1:25845747-25845766 | None:intergenic | 45.0% | |
| CAATGGATACGACCCTTCTT+TGG | - | chr8.1:25849098-25849117 | MS.gene44490:intron | 45.0% | |
| CCCTTCTTTGGACACTGTTA+CGG | - | chr8.1:25849110-25849129 | MS.gene44490:intron | 45.0% | |
| CCGTAACAGTGTCCAAAGAA+GGG | + | chr8.1:25849113-25849132 | None:intergenic | 45.0% | |
| CGAGAGCAACAATGATTCCT+AGG | - | chr8.1:25847676-25847695 | MS.gene44490:intron | 45.0% | |
| CTGTGATAAAAGGGGAGAAG+TGG | - | chr8.1:25851000-25851019 | MS.gene44490:CDS | 45.0% | |
| CTTTGGCAGACATCATTGCA+TGG | - | chr8.1:25850969-25850988 | MS.gene44490:CDS | 45.0% | |
| GAAACTGCGGAGAATACCAA+GGG | - | chr8.1:25847141-25847160 | MS.gene44490:intron | 45.0% | |
| GAGGAAGCAGGGTAGTTATT+GGG | - | chr8.1:25848904-25848923 | MS.gene44490:intron | 45.0% | |
| GCAACTTTGTTAGAGGAAGC+AGG | - | chr8.1:25848892-25848911 | MS.gene44490:intron | 45.0% | |
| GCTTGAATACACGGAATACC+GGG | + | chr8.1:25848484-25848503 | None:intergenic | 45.0% | |
| TAAGATGGAGTATAGCGTCG+AGG | - | chr8.1:25849601-25849620 | MS.gene44490:CDS | 45.0% | |
| TACTCTTACGGCGAAGTATG+AGG | + | chr8.1:25850589-25850608 | None:intergenic | 45.0% | |
| TCCACCTCACTTATTACACG+AGG | + | chr8.1:25848814-25848833 | None:intergenic | 45.0% | |
| TCCGTAACAGTGTCCAAAGA+AGG | + | chr8.1:25849114-25849133 | None:intergenic | 45.0% | |
| TCCTACTTCGATTCTTCACC+CGG | - | chr8.1:25848463-25848482 | MS.gene44490:intron | 45.0% | |
| TCGAACATGGATGGTAGCTA+TGG | - | chr8.1:25850651-25850670 | MS.gene44490:CDS | 45.0% | |
| TCTTTGGACACTGTTACGGA+AGG | - | chr8.1:25849114-25849133 | MS.gene44490:intron | 45.0% | |
| TGCAAGAATGGTTAACTGCG+TGG | - | chr8.1:25847210-25847229 | MS.gene44490:CDS | 45.0% | |
| TGCATCTTCTTCTTCCTTGC+TGG | - | chr8.1:25845730-25845749 | MS.gene44490:intron | 45.0% | |
| TGGATCAGATATCAGCCTCA+AGG | - | chr8.1:25848830-25848849 | MS.gene44490:intron | 45.0% | |
| TGTAAGTGCAAACGCACTTC+TGG | - | chr8.1:25850906-25850925 | MS.gene44490:intron | 45.0% | |
| TTATAGTGCTCTAACTGCGC+AGG | + | chr8.1:25850003-25850022 | None:intergenic | 45.0% | |
| TTGGGAGATGGAATTGAGTG+AGG | - | chr8.1:25848922-25848941 | MS.gene44490:intron | 45.0% | |
| TTTATTCACTGCTCCCCAAC+GGG | - | chr8.1:25850730-25850749 | MS.gene44490:intron | 45.0% | |
| TTTGCGTAAGGGAGAAACTG+CGG | - | chr8.1:25847128-25847147 | MS.gene44490:intron | 45.0% | |
| ! | AAGATGGAGTATAGCGTCGA+GGG | - | chr8.1:25849602-25849621 | MS.gene44490:CDS | 45.0% |
| ! | AGTGAGGTATTCAGCCACTT+GGG | - | chr8.1:25848938-25848957 | MS.gene44490:intron | 45.0% |
| ! | CACTTCTCCCCTTTTATCAC+AGG | + | chr8.1:25851002-25851021 | None:intergenic | 45.0% |
| ! | CATACAGGATGCCTTTTCTG+CGG | + | chr8.1:25847743-25847762 | None:intergenic | 45.0% |
| ! | GACTGTTGAGGATGCTACTT+TGG | - | chr8.1:25848662-25848681 | MS.gene44490:intron | 45.0% |
| ! | GCGCAGTTAGAGCACTATAA+AGG | - | chr8.1:25850003-25850022 | MS.gene44490:intron | 45.0% |
| ! | GTTCTGTGTCGGTGTTTCAT+AGG | - | chr8.1:25845960-25845979 | MS.gene44490:CDS | 45.0% |
| ! | TCTGAAAAGCTCTAACCAGG+AGG | + | chr8.1:25850272-25850291 | None:intergenic | 45.0% |
| ! | TTGATGACTGCTGGAGAGTT+TGG | - | chr8.1:25846086-25846105 | MS.gene44490:intron | 45.0% |
| ! | TTTGACCGACTTCATAGCGT+AGG | + | chr8.1:25849448-25849467 | None:intergenic | 45.0% |
| !! | GTTTTGGTCCCCAATTCTGT+TGG | + | chr8.1:25848547-25848566 | None:intergenic | 45.0% |
| !! | TCGTGTTTGGTGTTCTGTGT+CGG | - | chr8.1:25845949-25845968 | MS.gene44490:intron | 45.0% |
| AACCTGATCGATTGTCCCGT+TGG | + | chr8.1:25850748-25850767 | None:intergenic | 50.0% | |
| ACCGGGTGAAGAATCGAAGT+AGG | + | chr8.1:25848467-25848486 | None:intergenic | 50.0% | |
| ACCTGATCGATTGTCCCGTT+GGG | + | chr8.1:25850747-25850766 | None:intergenic | 50.0% | |
| ACGGCGAAGTATGAGGATAC+AGG | + | chr8.1:25850582-25850601 | None:intergenic | 50.0% | |
| ACTCTACCACTTCCTACACC+TGG | + | chr8.1:25848750-25848769 | None:intergenic | 50.0% | |
| ATGGGCCCCAAAAAAGCCAA+AGG | - | chr8.1:25849507-25849526 | MS.gene44490:intron | 50.0% | |
| CAGAATGGCTCGAACATGGA+TGG | - | chr8.1:25850642-25850661 | MS.gene44490:CDS | 50.0% | |
| GAATCAAGCAGCCTCGTTCT+CGG | + | chr8.1:25846044-25846063 | None:intergenic | 50.0% | |
| GAGCTGCCCTGTGATAAAAG+GGG | - | chr8.1:25850992-25851011 | MS.gene44490:CDS | 50.0% | |
| GATAAAAGGGGAGAAGTGGG+TGG | - | chr8.1:25851004-25851023 | MS.gene44490:CDS | 50.0% | |
| GATTCCTAGGAGTCATGGAG+AGG | - | chr8.1:25847689-25847708 | MS.gene44490:intron | 50.0% | |
| GCAGGGTAGTTATTGGGAGA+TGG | - | chr8.1:25848910-25848929 | MS.gene44490:intron | 50.0% | |
| GGAGCTGCCCTGTGATAAAA+GGG | - | chr8.1:25850991-25851010 | MS.gene44490:CDS | 50.0% | |
| GGGTGAAGAATCGAAGTAGG+AGG | + | chr8.1:25848464-25848483 | None:intergenic | 50.0% | |
| GTTACCTCTCCATGACTCCT+AGG | + | chr8.1:25847696-25847715 | None:intergenic | 50.0% | |
| TAAGTTCATGCCCTGGTGTG+AGG | + | chr8.1:25848019-25848038 | None:intergenic | 50.0% | |
| TAGCATGGAGATCGTAACGC+TGG | - | chr8.1:25848600-25848619 | MS.gene44490:intron | 50.0% | |
| TATGGCTACGAAGACTGCGT+TGG | - | chr8.1:25850669-25850688 | MS.gene44490:CDS | 50.0% | |
| TCTGCAGAATGGCTCGAACA+TGG | - | chr8.1:25850638-25850657 | MS.gene44490:CDS | 50.0% | |
| TCTTAGAGGAACTGAGGCTC+TGG | - | chr8.1:25848986-25849005 | MS.gene44490:intron | 50.0% | |
| TGGGCCCCAAAAAAGCCAAA+GGG | - | chr8.1:25849508-25849527 | MS.gene44490:intron | 50.0% | |
| TGTGGCCATTGCAAAAGCCT+AGG | - | chr8.1:25849010-25849029 | MS.gene44490:intron | 50.0% | |
| TTGCCCTCAAAGCTGAGATG+AGG | + | chr8.1:25848717-25848736 | None:intergenic | 50.0% | |
| ! | AGCTCTAACCAGGAGGTCTA+AGG | + | chr8.1:25850265-25850284 | None:intergenic | 50.0% |
| ! | ATGCCTTTTCTGCGGAGAGA+GGG | + | chr8.1:25847735-25847754 | None:intergenic | 50.0% |
| ! | ATGGATTGAGACCGAGAACG+AGG | - | chr8.1:25846030-25846049 | MS.gene44490:CDS | 50.0% |
| ! | GAGAGCCTAGGCTTTTGCAA+TGG | + | chr8.1:25849018-25849037 | None:intergenic | 50.0% |
| ! | GAGTGAGGTATTCAGCCACT+TGG | - | chr8.1:25848937-25848956 | MS.gene44490:intron | 50.0% |
| !! | TCATCTCAGCTTTGAGGGCA+AGG | - | chr8.1:25848716-25848735 | MS.gene44490:intron | 50.0% |
| !!! | TCGATTCCTTTTCAGGTGCG+TGG | - | chr8.1:25846125-25846144 | MS.gene44490:intron | 50.0% |
| !!! | TTTTGGGGCCCATATTCGTC+AGG | + | chr8.1:25849500-25849519 | None:intergenic | 50.0% |
| AGAAGTCCATCCCCCTGTCT+TGG | + | chr8.1:25850708-25850727 | None:intergenic | 55.0% | |
| AGAAGTGGGTGGCAACGAAG+TGG | - | chr8.1:25851015-25851034 | MS.gene44490:CDS | 55.0% | |
| CATGGAGATCGTAACGCTGG+TGG | - | chr8.1:25848603-25848622 | MS.gene44490:intron | 55.0% | |
| CCTGATCGATTGTCCCGTTG+GGG | + | chr8.1:25850746-25850765 | None:intergenic | 55.0% | |
| GAGAGAGGGCGAGCTGAAAA+GGG | + | chr8.1:25847721-25847740 | None:intergenic | 55.0% | |
| GGGAGCTGCCCTGTGATAAA+AGG | - | chr8.1:25850990-25851009 | MS.gene44490:CDS | 55.0% | |
| GGGTGGCAACGAAGTGGATA+AGG | - | chr8.1:25851021-25851040 | MS.gene44490:CDS | 55.0% | |
| GGTCTTCCAGGTGTAGGAAG+TGG | - | chr8.1:25848741-25848760 | MS.gene44490:intron | 55.0% | |
| GTAAAGCCAAGACAGGGGGA+TGG | - | chr8.1:25850699-25850718 | MS.gene44490:intron | 55.0% | |
| ! | AGGAACTGAGGCTCTGGTTG+TGG | - | chr8.1:25848992-25849011 | MS.gene44490:intron | 55.0% |
| ! | GAGGCTGCTTGATTCGACGA+AGG | - | chr8.1:25846049-25846068 | MS.gene44490:CDS | 55.0% |
| ! | GATGCCTTTTCTGCGGAGAG+AGG | + | chr8.1:25847736-25847755 | None:intergenic | 55.0% |
| !! | AAGGCTGGTCTTCCAGGTGT+AGG | - | chr8.1:25848735-25848754 | MS.gene44490:intron | 55.0% |
| CCCCAACGGGACAATCGATC+AGG | - | chr8.1:25850743-25850762 | MS.gene44490:intron | 60.0% | |
| GGAGAGAGGGCGAGCTGAAA+AGG | + | chr8.1:25847722-25847741 | None:intergenic | 60.0% | |
| TCGCCCTCTCTCCGCAGAAA+AGG | - | chr8.1:25847729-25847748 | MS.gene44490:intron | 60.0% | |
| !! | CTCAGCTTTGAGGGCAAGGC+TGG | - | chr8.1:25848720-25848739 | MS.gene44490:intron | 60.0% |
| !! | GAGGGCAAGGCTGGTCTTCC+AGG | - | chr8.1:25848729-25848748 | MS.gene44490:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 25845652 | 25851070 | 25845652 | ID=MS.gene44490 |
| chr8.1 | mRNA | 25845652 | 25851070 | 25845652 | ID=MS.gene44490.t1;Parent=MS.gene44490 |
| chr8.1 | exon | 25850936 | 25851070 | 25850936 | ID=MS.gene44490.t1.exon1;Parent=MS.gene44490.t1 |
| chr8.1 | CDS | 25850936 | 25851070 | 25850936 | ID=cds.MS.gene44490.t1;Parent=MS.gene44490.t1 |
| chr8.1 | exon | 25850583 | 25850705 | 25850583 | ID=MS.gene44490.t1.exon2;Parent=MS.gene44490.t1 |
| chr8.1 | CDS | 25850583 | 25850705 | 25850583 | ID=cds.MS.gene44490.t1;Parent=MS.gene44490.t1 |
| chr8.1 | exon | 25849547 | 25849704 | 25849547 | ID=MS.gene44490.t1.exon3;Parent=MS.gene44490.t1 |
| chr8.1 | CDS | 25849547 | 25849704 | 25849547 | ID=cds.MS.gene44490.t1;Parent=MS.gene44490.t1 |
| chr8.1 | exon | 25849012 | 25849114 | 25849012 | ID=MS.gene44490.t1.exon4;Parent=MS.gene44490.t1 |
| chr8.1 | CDS | 25849012 | 25849114 | 25849012 | ID=cds.MS.gene44490.t1;Parent=MS.gene44490.t1 |
| chr8.1 | exon | 25847193 | 25847288 | 25847193 | ID=MS.gene44490.t1.exon5;Parent=MS.gene44490.t1 |
| chr8.1 | CDS | 25847193 | 25847288 | 25847193 | ID=cds.MS.gene44490.t1;Parent=MS.gene44490.t1 |
| chr8.1 | exon | 25846780 | 25846845 | 25846780 | ID=MS.gene44490.t1.exon6;Parent=MS.gene44490.t1 |
| chr8.1 | CDS | 25846780 | 25846845 | 25846780 | ID=cds.MS.gene44490.t1;Parent=MS.gene44490.t1 |
| chr8.1 | exon | 25845958 | 25846077 | 25845958 | ID=MS.gene44490.t1.exon7;Parent=MS.gene44490.t1 |
| chr8.1 | CDS | 25845958 | 25846077 | 25845958 | ID=cds.MS.gene44490.t1;Parent=MS.gene44490.t1 |
| chr8.1 | exon | 25845652 | 25845744 | 25845652 | ID=MS.gene44490.t1.exon8;Parent=MS.gene44490.t1 |
| chr8.1 | CDS | 25845652 | 25845744 | 25845652 | ID=cds.MS.gene44490.t1;Parent=MS.gene44490.t1 |
| Gene Sequence |
| Protein sequence |
