Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44738.t1 | XP_003621559.2 | 97.9 | 569 | 12 | 0 | 5 | 573 | 1640 | 2208 | 4.30E-298 | 1033.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44738.t1 | Q9SRU2 | 66.7 | 579 | 189 | 4 | 5 | 580 | 1645 | 2222 | 1.6e-213 | 744.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44738.t1 | G7KRX3 | 97.9 | 569 | 12 | 0 | 5 | 573 | 1640 | 2208 | 3.1e-298 | 1033.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051795 | MS.gene44738 | 0.844132 | 9.13E-59 | -1.69E-46 |
| MS.gene051826 | MS.gene44738 | 0.855491 | 6.09E-62 | -1.69E-46 |
| MS.gene056301 | MS.gene44738 | 0.871559 | 6.23E-67 | -1.69E-46 |
| MS.gene056302 | MS.gene44738 | 0.92737 | 1.29E-91 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44738.t1 | MTR_7g017100 | 98.243 | 569 | 10 | 0 | 5 | 573 | 1640 | 2208 | 0.0 | 1129 |
| MS.gene44738.t1 | MTR_7g018620 | 88.811 | 286 | 29 | 1 | 570 | 852 | 45 | 330 | 2.95e-152 | 449 |
| MS.gene44738.t1 | MTR_6g052002 | 88.265 | 196 | 20 | 1 | 586 | 778 | 1 | 196 | 2.73e-101 | 318 |
| MS.gene44738.t1 | MTR_2g048385 | 41.418 | 268 | 107 | 7 | 586 | 847 | 1 | 224 | 1.80e-45 | 163 |
| MS.gene44738.t1 | MTR_7g451160 | 46.897 | 145 | 74 | 3 | 592 | 734 | 8 | 151 | 4.15e-32 | 125 |
| MS.gene44738.t1 | MTR_6g021620 | 46.392 | 97 | 52 | 0 | 586 | 682 | 1 | 97 | 9.16e-28 | 108 |
| MS.gene44738.t1 | MTR_1g036850 | 44.828 | 87 | 44 | 2 | 585 | 670 | 3 | 86 | 4.85e-16 | 75.9 |
| MS.gene44738.t1 | MTR_8g064380 | 45.614 | 57 | 31 | 0 | 586 | 642 | 1 | 57 | 6.63e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44738.t1 | AT3G02260 | 68.394 | 579 | 179 | 4 | 5 | 580 | 1636 | 2213 | 0.0 | 795 |
| MS.gene44738.t1 | AT3G02260 | 68.394 | 579 | 179 | 4 | 5 | 580 | 1635 | 2212 | 0.0 | 795 |
| MS.gene44738.t1 | AT3G02260 | 68.394 | 579 | 179 | 4 | 5 | 580 | 1645 | 2222 | 0.0 | 795 |
| MS.gene44738.t1 | AT3G02260 | 68.394 | 579 | 179 | 4 | 5 | 580 | 1645 | 2222 | 0.0 | 795 |
Find 200 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGAGAAAGTTAAGAAAT+TGG | 0.218448 | 7.3:-81566136 | MS.gene44738:CDS |
| AGGTTCACAGGTTCAATTAA+TGG | 0.235538 | 7.3:-81566841 | MS.gene44738:CDS |
| ACAGATCTGTGCAAATTTCT+TGG | 0.257459 | 7.3:-81564421 | MS.gene44738:CDS |
| TATGATGTTGGACAGTTAAT+TGG | 0.260996 | 7.3:-81567104 | MS.gene44738:CDS |
| CAAGATGGTACCACACTATT+AGG | 0.284366 | 7.3:-81566516 | MS.gene44738:CDS |
| ATGCATCAGACACTCTCTTT+TGG | 0.295723 | 7.3:+81564176 | None:intergenic |
| AGACGGGTGGAATGGGTTCC+AGG | 0.300009 | 7.3:-81566861 | MS.gene44738:CDS |
| ACGGCAGTGGTGACGCTTAT+TGG | 0.301276 | 7.3:-81564849 | MS.gene44738:CDS |
| AAATTTGCACAGATCTGTTT+TGG | 0.305133 | 7.3:+81564426 | None:intergenic |
| ACATCTGGATCTGGCGGCTT+TGG | 0.309085 | 7.3:+81564274 | None:intergenic |
| TGCATACAAACCACTGTCTA+AGG | 0.313290 | 7.3:-81566250 | MS.gene44738:CDS |
| GCTCCTGTGGGTGTGGATGC+TGG | 0.314948 | 7.3:-81566171 | MS.gene44738:CDS |
| AGAAATGATTCCATTGTTAC+TGG | 0.319423 | 7.3:-81567444 | MS.gene44738:CDS |
| CCATTCTCTATACAGCTTCC+CGG | 0.336130 | 7.3:-81566722 | MS.gene44738:CDS |
| GATCAGTTTCTTCTGATTGA+AGG | 0.342502 | 7.3:+81564563 | None:intergenic |
| CGTTTCACGTTGCATTCATT+TGG | 0.351721 | 7.3:-81564681 | MS.gene44738:CDS |
| TGAAGGAGCTAAACAGAGTT+TGG | 0.355960 | 7.3:-81565986 | MS.gene44738:CDS |
| ATGCAGTCATACCGACTATA+GGG | 0.356885 | 7.3:+81566268 | None:intergenic |
| GGTAGAGAATGCAGAAGAAA+TGG | 0.358376 | 7.3:-81564500 | MS.gene44738:CDS |
| TAAGGATAAGAATATCAGTT+TGG | 0.360857 | 7.3:-81567336 | MS.gene44738:CDS |
| AAAGTTAAGAAATTGGGTTC+TGG | 0.374204 | 7.3:-81566129 | MS.gene44738:CDS |
| TCAAAATCTGAATCACTATC+TGG | 0.376957 | 7.3:+81567527 | None:intergenic |
| GGATGGGTTTCACTCGAGTT+TGG | 0.378304 | 7.3:-81564316 | MS.gene44738:CDS |
| TCCTCTTCTTCATCCGATAT+AGG | 0.380785 | 7.3:+81564628 | None:intergenic |
| TATGCAGTCATACCGACTAT+AGG | 0.387104 | 7.3:+81566267 | None:intergenic |
| AGAGATGTCTTCTGTATTTG+AGG | 0.389134 | 7.3:-81566463 | MS.gene44738:CDS |
| ATCATTTGATCTCAAGATAA+AGG | 0.389920 | 7.3:-81567249 | MS.gene44738:CDS |
| TTCCACAATGATGACATTCA+TGG | 0.394640 | 7.3:+81564462 | None:intergenic |
| CTACTGTGAATTTCTTTCCC+TGG | 0.397975 | 7.3:+81564898 | None:intergenic |
| CATCACACCAGATGTGAAAC+TGG | 0.398683 | 7.3:-81566037 | MS.gene44738:CDS |
| CTCTTCACCACAAACACATC+TGG | 0.400598 | 7.3:+81564259 | None:intergenic |
| ACGAGACTCCCACCATTCTA+AGG | 0.400743 | 7.3:-81567354 | MS.gene44738:CDS |
| CTAGAAAGTCCAAGTCCTAC+AGG | 0.403493 | 7.3:-81565946 | MS.gene44738:CDS |
| TGTCAGTCAAAGGGAATGTT+GGG | 0.408379 | 7.3:-81566644 | MS.gene44738:CDS |
| TCTGAGAAAGTTAAGAAATT+GGG | 0.409056 | 7.3:-81566135 | MS.gene44738:CDS |
| CTTGTTGTTCTGTCAGAAGA+TGG | 0.413393 | 7.3:-81566687 | MS.gene44738:CDS |
| GTCACTCTACTTCAAGTTAT+GGG | 0.422238 | 7.3:-81564122 | MS.gene44738:CDS |
| AAGGATAAGAATATCAGTTT+GGG | 0.427127 | 7.3:-81567335 | MS.gene44738:CDS |
| GTCAGCTGTCACAGGAGAAA+TGG | 0.430947 | 7.3:+81567073 | None:intergenic |
| GGTGGTGACGCCATCAGAAA+TGG | 0.432678 | 7.3:-81566015 | MS.gene44738:CDS |
| TAGAGACCTTCTACCTATAT+CGG | 0.437229 | 7.3:-81564641 | MS.gene44738:CDS |
| GGAATGGGTTCCAGGTTCAC+AGG | 0.437263 | 7.3:-81566853 | MS.gene44738:CDS |
| ACAAGATAGTTCTCAACAAC+AGG | 0.438653 | 7.3:+81566984 | None:intergenic |
| TGTCACTCTACTTCAAGTTA+TGG | 0.441433 | 7.3:-81564123 | MS.gene44738:CDS |
| TCGGATGAAGAAGAGGAATC+TGG | 0.442177 | 7.3:-81564622 | MS.gene44738:CDS |
| GCCATTGAACTTGCTTTGCA+AGG | 0.442446 | 7.3:-81566894 | MS.gene44738:CDS |
| GGCGGCTTTGGCAACGGTGG+AGG | 0.444655 | 7.3:+81564286 | None:intergenic |
| ATCCTCTGGTTTGATCGAAC+TGG | 0.445222 | 7.3:-81564230 | MS.gene44738:CDS |
| TCAGACAGCAGAAGAGGAAA+AGG | 0.450710 | 7.3:-81564521 | MS.gene44738:CDS |
| TGATATTCTTATCCTTAGAA+TGG | 0.452875 | 7.3:+81567342 | None:intergenic |
| TCTTGTTGTAGCCGGTTATG+AGG | 0.455018 | 7.3:-81566967 | MS.gene44738:CDS |
| ACATCATTGGAAAGAATTGT+TGG | 0.457135 | 7.3:-81566409 | MS.gene44738:CDS |
| GACCTGACAATCCTCATAAC+CGG | 0.461631 | 7.3:+81566956 | None:intergenic |
| AGAGGAATCTGGATTGGAAT+GGG | 0.463955 | 7.3:-81564611 | MS.gene44738:CDS |
| ATTAATTGAACCTGTGAACC+TGG | 0.464474 | 7.3:+81566843 | None:intergenic |
| CATTCTCTATACAGCTTCCC+GGG | 0.469789 | 7.3:-81566721 | MS.gene44738:CDS |
| GAAAGTAAGATGCGACCTGC+TGG | 0.470258 | 7.3:-81566435 | MS.gene44738:CDS |
| CTCAAGTCTCACTTAGCAAA+TGG | 0.473169 | 7.3:-81567203 | MS.gene44738:CDS |
| CTTCATCCGATATAGGTAGA+AGG | 0.478985 | 7.3:+81564635 | None:intergenic |
| TGTTGGACAGTTAATTGGTC+AGG | 0.479583 | 7.3:-81567099 | MS.gene44738:CDS |
| TGCAAGGTGCATACATTAGA+CGG | 0.480808 | 7.3:-81566878 | MS.gene44738:CDS |
| ACAGGAGGGTGAGAAGTTGC+TGG | 0.481360 | 7.3:-81564785 | MS.gene44738:CDS |
| AGCCGGTTATGAGGATTGTC+AGG | 0.482120 | 7.3:-81566958 | MS.gene44738:CDS |
| TGAAGAAGAGGAATCTGGAT+TGG | 0.486518 | 7.3:-81564617 | MS.gene44738:CDS |
| TTGAAGAAAGCTTATAAAAG+TGG | 0.487445 | 7.3:-81567272 | MS.gene44738:CDS |
| AGAACTTGATGTTGAGAGTC+AGG | 0.487607 | 7.3:-81567420 | MS.gene44738:CDS |
| CATACATTAGACGGGTGGAA+TGG | 0.488106 | 7.3:-81566869 | MS.gene44738:CDS |
| AGATACTTGCTCAGAGTATG+AGG | 0.488862 | 7.3:-81566311 | MS.gene44738:CDS |
| GGTTCGAGTTGTCAGTCAAA+GGG | 0.490566 | 7.3:-81566653 | MS.gene44738:CDS |
| ACCACAAACACATCTGGATC+TGG | 0.490838 | 7.3:+81564265 | None:intergenic |
| GGATCTGGCGGCTTTGGCAA+CGG | 0.492872 | 7.3:+81564280 | None:intergenic |
| TGCGAAACCGTGCTCTCGTA+TGG | 0.493588 | 7.3:-81564747 | MS.gene44738:CDS |
| AATATATTCGCATGCTCCTG+TGG | 0.495417 | 7.3:-81566184 | MS.gene44738:CDS |
| TTCCAATGATGTACTCCAGC+AGG | 0.496028 | 7.3:+81566420 | None:intergenic |
| ATACATTAGACGGGTGGAAT+GGG | 0.501906 | 7.3:-81566868 | MS.gene44738:CDS |
| CACCACGAGGATTCAATGTC+AGG | 0.502615 | 7.3:+81566934 | None:intergenic |
| TATCAGAGCAGTTCTGATCC+AGG | 0.503304 | 7.3:-81564916 | MS.gene44738:intron |
| TTGTCAGTCAAAGGGAATGT+TGG | 0.504570 | 7.3:-81566645 | MS.gene44738:CDS |
| GATAACAGTGCACCTGTTCG+TGG | 0.505867 | 7.3:-81567602 | MS.gene44738:CDS |
| TGGGTTTCACTCGAGTTTGG+CGG | 0.506254 | 7.3:-81564313 | MS.gene44738:CDS |
| GACTGATGTTGTCCAGGGAC+AGG | 0.507116 | 7.3:+81566787 | None:intergenic |
| CTCTCGTATGGTGGCAGTGG+TGG | 0.508076 | 7.3:-81564735 | MS.gene44738:CDS |
| GGAAGAGAAATTCATGCAAA+GGG | 0.508875 | 7.3:-81566588 | MS.gene44738:CDS |
| TCACCACCCAGTTTCACATC+TGG | 0.509650 | 7.3:+81566030 | None:intergenic |
| CATTGGAAAGAATTGTTGGC+TGG | 0.511533 | 7.3:-81566405 | MS.gene44738:CDS |
| AAGAGGAATCTGGATTGGAA+TGG | 0.512534 | 7.3:-81564612 | MS.gene44738:CDS |
| ACCTTAAAACCTGTAGGACT+TGG | 0.514010 | 7.3:+81565937 | None:intergenic |
| TTCGCATGCTCCTGTGGGTG+TGG | 0.514373 | 7.3:-81566178 | MS.gene44738:CDS |
| AAAAGAACATGTACAACTCA+AGG | 0.517219 | 7.3:-81566610 | MS.gene44738:CDS |
| GACAAAGTGAAGTAGTGTAC+TGG | 0.518739 | 7.3:+81566765 | None:intergenic |
| TTCAGAATCTCCATTTCTGA+TGG | 0.519843 | 7.3:+81566005 | None:intergenic |
| TTCTGCACTTGCAGTATCCA+TGG | 0.520675 | 7.3:-81566343 | MS.gene44738:CDS |
| GGGTGAGAAGTTGCTGGAGG+CGG | 0.521291 | 7.3:-81564779 | MS.gene44738:CDS |
| GACCTGCTGGAGTACATCAT+TGG | 0.523414 | 7.3:-81566422 | MS.gene44738:CDS |
| GCTTTGGCAACGGTGGAGGT+AGG | 0.525470 | 7.3:+81564290 | None:intergenic |
| ATGGACATGCCACAATTTGA+CGG | 0.525488 | 7.3:-81564868 | MS.gene44738:CDS |
| ATTAATTACTGAAGGCATCA+AGG | 0.525926 | 7.3:+81567379 | None:intergenic |
| AGGTTCGAGTTGTCAGTCAA+AGG | 0.527926 | 7.3:-81566654 | MS.gene44738:CDS |
| GAGCATGCGAATATATTTGA+AGG | 0.528115 | 7.3:+81566190 | None:intergenic |
| GAGAACTATCTTGTTGTAGC+CGG | 0.528415 | 7.3:-81566975 | MS.gene44738:CDS |
| TAAACAGAGTTTGGTGAATG+AGG | 0.531686 | 7.3:-81565977 | MS.gene44738:CDS |
| CTCGCCAACTCGCATGTGGA+TGG | 0.534527 | 7.3:+81564704 | None:intergenic |
| AAAGAAGCTGCATCAGAGCT+TGG | 0.536607 | 7.3:+81566489 | None:intergenic |
| CAGAGTTTGGTGAATGAGGA+TGG | 0.538667 | 7.3:-81565973 | MS.gene44738:CDS |
| GTACTGGACTGATGTTGTCC+AGG | 0.539201 | 7.3:+81566781 | None:intergenic |
| CTGATCTCCATCTTCAGAAA+GGG | 0.539917 | 7.3:+81567553 | None:intergenic |
| CCGGGAAGCTGTATAGAGAA+TGG | 0.539981 | 7.3:+81566722 | None:intergenic |
| TAAGTGAGACTTGAGATCCT+TGG | 0.541897 | 7.3:+81567211 | None:intergenic |
| ATTCTTATCCTTAGAATGGT+GGG | 0.546272 | 7.3:+81567346 | None:intergenic |
| TGTCTTGTCTTACATGATGA+TGG | 0.547818 | 7.3:-81566216 | MS.gene44738:CDS |
| GCCAGATCCAGATGTGTTTG+TGG | 0.548708 | 7.3:-81564266 | MS.gene44738:CDS |
| AAAGAATTGTTGGCTGGCAG+TGG | 0.549010 | 7.3:-81566399 | MS.gene44738:CDS |
| GTGAAGAGTGGATTATCCTC+TGG | 0.549909 | 7.3:-81564244 | MS.gene44738:CDS |
| AATGTGTTAGAACCACGAAC+AGG | 0.552113 | 7.3:+81567590 | None:intergenic |
| CAATCAGAAGAAACTGATCA+AGG | 0.552737 | 7.3:-81564559 | MS.gene44738:CDS |
| TTATGTTATCCTTCACCTTG+AGG | 0.554382 | 7.3:-81564085 | None:intergenic |
| TTGGTCTTGTCAGCTGTCAC+AGG | 0.556401 | 7.3:+81567065 | None:intergenic |
| TCACCACTGCCGTCAAATTG+TGG | 0.557416 | 7.3:+81564859 | None:intergenic |
| TCTGGCGGCTTTGGCAACGG+TGG | 0.557558 | 7.3:+81564283 | None:intergenic |
| AGGGAAAGAAATTCACAGTA+GGG | 0.559063 | 7.3:-81564896 | MS.gene44738:CDS |
| GCTGATCTCCATCTTCAGAA+AGG | 0.559682 | 7.3:+81567552 | None:intergenic |
| GTACGAGGTCGGCTTGCTGT+TGG | 0.560790 | 7.3:-81567149 | MS.gene44738:CDS |
| GCAAGGTGCATACATTAGAC+GGG | 0.561856 | 7.3:-81566877 | MS.gene44738:CDS |
| TGAAGTAGAGTGACAGAGCA+AGG | 0.563368 | 7.3:+81564131 | None:intergenic |
| GGGAAGAGAAATTCATGCAA+AGG | 0.563657 | 7.3:-81566589 | MS.gene44738:CDS |
| TGAGTAGTGTGTTCGAATCG+AGG | 0.566493 | 7.3:-81564369 | MS.gene44738:CDS |
| TACGAGAGCACGGTTTCGCA+AGG | 0.568686 | 7.3:+81564750 | None:intergenic |
| ATCCTCACTAAAGCTTATGC+TGG | 0.569792 | 7.3:-81566105 | MS.gene44738:CDS |
| ACCTTGCAAAGCAAGTTCAA+TGG | 0.570721 | 7.3:+81566893 | None:intergenic |
| AAAGTTGCTATATATGATGT+TGG | 0.570728 | 7.3:-81567116 | MS.gene44738:CDS |
| CAGGGAAAGAAATTCACAGT+AGG | 0.571169 | 7.3:-81564897 | MS.gene44738:CDS |
| ACCTATATCGGATGAAGAAG+AGG | 0.572370 | 7.3:-81564629 | MS.gene44738:CDS |
| GAAGACAAGGTGATTTCTCA+TGG | 0.572865 | 7.3:-81567311 | MS.gene44738:CDS |
| GGGAAAGAAATTCACAGTAG+GGG | 0.575488 | 7.3:-81564895 | MS.gene44738:CDS |
| GGTAGAAGGTCTCTATACTC+TGG | 0.575915 | 7.3:+81564649 | None:intergenic |
| CTCCATGAATGTCATCATTG+TGG | 0.577446 | 7.3:-81564464 | MS.gene44738:CDS |
| ACTCATTCAGACAGCAGAAG+AGG | 0.578209 | 7.3:-81564527 | MS.gene44738:CDS |
| TATTCTTATCCTTAGAATGG+TGG | 0.578797 | 7.3:+81567345 | None:intergenic |
| TCAAGTTCTTCCAGTAACAA+TGG | 0.582952 | 7.3:+81567434 | None:intergenic |
| ATGCCACAATTTGACGGCAG+TGG | 0.583389 | 7.3:-81564862 | MS.gene44738:CDS |
| TACTTCAAGTTATGGGACCC+TGG | 0.585642 | 7.3:-81564115 | MS.gene44738:CDS |
| TTCCAGCATAAGCTTTAGTG+AGG | 0.586801 | 7.3:+81566103 | None:intergenic |
| GATGTGTTTGTGGTGAAGAG+TGG | 0.587223 | 7.3:-81564256 | MS.gene44738:CDS |
| TCAGAGTATGAGGCATTCAG+TGG | 0.589656 | 7.3:-81566301 | MS.gene44738:CDS |
| CAAGATATATGACCTGTCCC+TGG | 0.590697 | 7.3:-81566799 | MS.gene44738:CDS |
| GGTCGGCTTGCTGTTGGTGA+AGG | 0.590911 | 7.3:-81567143 | MS.gene44738:CDS |
| GTGCTCTCGTATGGTGGCAG+TGG | 0.594027 | 7.3:-81564738 | MS.gene44738:CDS |
| GCAAAGCAAGTTCAATGGCA+AGG | 0.594496 | 7.3:+81566898 | None:intergenic |
| TCTCGTCTATTAATTACTGA+AGG | 0.595022 | 7.3:+81567371 | None:intergenic |
| ACACCAGCATCCACACCCAC+AGG | 0.596058 | 7.3:+81566168 | None:intergenic |
| ATCAGAGCAGTTCTGATCCA+GGG | 0.597438 | 7.3:-81564915 | MS.gene44738:intron |
| TCGTACACTAACACTGAGCA+AGG | 0.598516 | 7.3:+81567166 | None:intergenic |
| GAGTAGTGTGTTCGAATCGA+GGG | 0.600652 | 7.3:-81564368 | MS.gene44738:CDS |
| GCAGTGGTGACGCTTATTGG+TGG | 0.600902 | 7.3:-81564846 | MS.gene44738:CDS |
| GGATAACATAACTGTCCACC+AGG | 0.602898 | 7.3:+81564097 | None:intergenic |
| GGTTGACTATTCTAATGCCA+AGG | 0.606387 | 7.3:-81567228 | MS.gene44738:CDS |
| ATATATTCGCATGCTCCTGT+GGG | 0.606720 | 7.3:-81566183 | MS.gene44738:CDS |
| AAGTATCTCATGTTCCTCCA+TGG | 0.607656 | 7.3:+81566326 | None:intergenic |
| TCACCTTGTCCTCAAGGTGA+AGG | 0.608165 | 7.3:+81564076 | None:intergenic |
| GATGCCATCCACATGCGAGT+TGG | 0.613742 | 7.3:-81564708 | MS.gene44738:CDS |
| AACGCTCGCCAACTCGCATG+TGG | 0.614660 | 7.3:+81564700 | None:intergenic |
| TATCAGTTTGGGAGAAGACA+AGG | 0.615075 | 7.3:-81567324 | MS.gene44738:CDS |
| AAAGAACATGTACAACTCAA+GGG | 0.616550 | 7.3:-81566609 | MS.gene44738:CDS |
| GGAAAGAAATTCACAGTAGG+GGG | 0.621732 | 7.3:-81564894 | MS.gene44738:CDS |
| ATCAGAAATGGAGATTCTGA+AGG | 0.623332 | 7.3:-81566003 | MS.gene44738:CDS |
| TCAGTGTTAGTGTACGAGGT+CGG | 0.623545 | 7.3:-81567160 | MS.gene44738:CDS |
| GGTTCAGCCTCCCCTATAGT+CGG | 0.625084 | 7.3:-81566279 | MS.gene44738:CDS |
| AACTGTCAATGTTTGAAACA+CGG | 0.625660 | 7.3:-81567637 | None:intergenic |
| TGCAGTCATACCGACTATAG+GGG | 0.631291 | 7.3:+81566269 | None:intergenic |
| AGCTGTCACAGGAGAAATGG+TGG | 0.635584 | 7.3:+81567076 | None:intergenic |
| GAAACCGTGCTCTCGTATGG+TGG | 0.641075 | 7.3:-81564744 | MS.gene44738:CDS |
| TTGCTCAGTGTTAGTGTACG+AGG | 0.642740 | 7.3:-81567164 | MS.gene44738:CDS |
| CAGAGTATGAGGCATTCAGT+GGG | 0.646624 | 7.3:-81566300 | MS.gene44738:CDS |
| TGATGTTGTGGGAACACAGG+AGG | 0.649865 | 7.3:-81564800 | MS.gene44738:CDS |
| TTTGTCAGATGACATGATTG+TGG | 0.651661 | 7.3:-81566748 | MS.gene44738:CDS |
| AGGTGCATACATTAGACGGG+TGG | 0.658241 | 7.3:-81566874 | MS.gene44738:CDS |
| CACAATGATGACATTCATGG+AGG | 0.661506 | 7.3:+81564465 | None:intergenic |
| GAGGATACCTTAAAACCTGT+AGG | 0.663363 | 7.3:+81565931 | None:intergenic |
| GATGTTGTGGGAACACAGGA+GGG | 0.665539 | 7.3:-81564799 | MS.gene44738:CDS |
| ACTGCCACCATACGAGAGCA+CGG | 0.670073 | 7.3:+81564740 | None:intergenic |
| TTCAAGTTATGGGACCCTGG+TGG | 0.675989 | 7.3:-81564112 | MS.gene44738:CDS |
| CGATCAATCACTTCACCACG+AGG | 0.677036 | 7.3:+81566921 | None:intergenic |
| TGCCAGTTCGATCAAACCAG+AGG | 0.680110 | 7.3:+81564228 | None:intergenic |
| TACTGGACTGATGTTGTCCA+GGG | 0.680184 | 7.3:+81566782 | None:intergenic |
| GAAAGAAATTCACAGTAGGG+GGG | 0.680620 | 7.3:-81564893 | MS.gene44738:CDS |
| CGAGTTGTATAATTTCAAAG+CGG | 0.681493 | 7.3:+81567015 | None:intergenic |
| GGAGGGTGAGAAGTTGCTGG+AGG | 0.682888 | 7.3:-81564782 | MS.gene44738:CDS |
| ACAAACACATCTGGATCTGG+CGG | 0.689367 | 7.3:+81564268 | None:intergenic |
| GATTGAAGGCTGAATGTGTG+AGG | 0.689518 | 7.3:+81564577 | None:intergenic |
| GTCCTGACATTGAATCCTCG+TGG | 0.690139 | 7.3:-81566936 | MS.gene44738:CDS |
| ATCACACCAGATGTGAAACT+GGG | 0.698328 | 7.3:-81566036 | MS.gene44738:CDS |
| GTCAGTCAAAGGGAATGTTG+GGG | 0.702379 | 7.3:-81566643 | MS.gene44738:CDS |
| GCTTGGTCGACCTAATAGTG+TGG | 0.708172 | 7.3:+81566506 | None:intergenic |
| AGTCATACCGACTATAGGGG+AGG | 0.712607 | 7.3:+81566272 | None:intergenic |
| ATTCTCTATACAGCTTCCCG+GGG | 0.716838 | 7.3:-81566720 | MS.gene44738:CDS |
| TGCACTTGCAGTATCCATGG+AGG | 0.726504 | 7.3:-81566340 | MS.gene44738:CDS |
| CATCATGTAAGACAAGACAG+TGG | 0.730321 | 7.3:+81566220 | None:intergenic |
| AATTACTGAAGGCATCAAGG+AGG | 0.739577 | 7.3:+81567382 | None:intergenic |
| GATAACATAACTGTCCACCA+GGG | 0.763454 | 7.3:+81564098 | None:intergenic |
| ACACCAGATGTGAAACTGGG+TGG | 0.798153 | 7.3:-81566033 | MS.gene44738:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGCCTAGAAAAATTAT+CGG | - | chr7.3:81567373-81567392 | MS.gene44738:CDS | 20.0% |
| !! | CAAAACTATAAAGAAAGATT+AGG | - | chr7.3:81566293-81566312 | MS.gene44738:CDS | 20.0% |
| !! | TTCTATCATAAACCATATTT+CGG | + | chr7.3:81566334-81566353 | None:intergenic | 20.0% |
| !! | TTTATGATAGAACATTTAGT+GGG | - | chr7.3:81566342-81566361 | MS.gene44738:CDS | 20.0% |
| !!! | ACTTTTAAATGCTAGATATT+TGG | - | chr7.3:81565923-81565942 | MS.gene44738:intron | 20.0% |
| !!! | ATCTTTCTTTATAGTTTTGT+AGG | + | chr7.3:81566292-81566311 | None:intergenic | 20.0% |
| !!! | CTTTTAAATGCTAGATATTT+GGG | - | chr7.3:81565924-81565943 | MS.gene44738:intron | 20.0% |
| !!! | GAATATATTACTGTATTTTG+TGG | - | chr7.3:81565829-81565848 | MS.gene44738:intron | 20.0% |
| ! | AAAGTTGCTATATATGATGT+TGG | - | chr7.3:81564600-81564619 | MS.gene44738:CDS | 25.0% |
| ! | AAGGATAAGAATATCAGTTT+GGG | - | chr7.3:81564381-81564400 | MS.gene44738:CDS | 25.0% |
| ! | AGATGAAATCTGTTAGTAAT+AGG | - | chr7.3:81566475-81566494 | MS.gene44738:CDS | 25.0% |
| ! | ATCATTTGATCTCAAGATAA+AGG | - | chr7.3:81564467-81564486 | MS.gene44738:CDS | 25.0% |
| ! | ATCTGAGAAAGTTAAGAAAT+TGG | - | chr7.3:81565580-81565599 | MS.gene44738:intron | 25.0% |
| ! | GTATTATAAATAAGATGCAG+AGG | - | chr7.3:81566620-81566639 | MS.gene44738:CDS | 25.0% |
| ! | GTTTATGATAGAACATTTAG+TGG | - | chr7.3:81566341-81566360 | MS.gene44738:CDS | 25.0% |
| ! | TAAGGATAAGAATATCAGTT+TGG | - | chr7.3:81564380-81564399 | MS.gene44738:CDS | 25.0% |
| ! | TCTGAGAAAGTTAAGAAATT+GGG | - | chr7.3:81565581-81565600 | MS.gene44738:intron | 25.0% |
| ! | TGATATTCTTATCCTTAGAA+TGG | + | chr7.3:81564377-81564396 | None:intergenic | 25.0% |
| ! | TTGAAGAAAGCTTATAAAAG+TGG | - | chr7.3:81564444-81564463 | MS.gene44738:CDS | 25.0% |
| !! | AGTTGTACATGTTCTTTTAA+TGG | + | chr7.3:81565104-81565123 | None:intergenic | 25.0% |
| !! | TAGAAAATATGGTGGAAAAT+AGG | - | chr7.3:81566166-81566185 | MS.gene44738:CDS | 25.0% |
| !! | TTTAGACAGATGTTTTACAT+TGG | + | chr7.3:81564673-81564692 | None:intergenic | 25.0% |
| AAAAAGTCAAGAGGAAATTC+AGG | + | chr7.3:81565644-81565663 | None:intergenic | 30.0% | |
| AAAAGAACATGTACAACTCA+AGG | - | chr7.3:81565106-81565125 | MS.gene44738:intron | 30.0% | |
| AAAGAACATGTACAACTCAA+GGG | - | chr7.3:81565107-81565126 | MS.gene44738:intron | 30.0% | |
| AAAGTTAAGAAATTGGGTTC+TGG | - | chr7.3:81565587-81565606 | MS.gene44738:intron | 30.0% | |
| AAGATTAGGAGTTAATGAGT+TGG | - | chr7.3:81566307-81566326 | MS.gene44738:CDS | 30.0% | |
| ACATCATTGGAAAGAATTGT+TGG | - | chr7.3:81565307-81565326 | MS.gene44738:intron | 30.0% | |
| AGAAATGATTCCATTGTTAC+TGG | - | chr7.3:81564272-81564291 | MS.gene44738:CDS | 30.0% | |
| AGAATGATTCTGGATAATGT+TGG | + | chr7.3:81566078-81566097 | None:intergenic | 30.0% | |
| ATAGAACATTTAGTGGGATA+AGG | - | chr7.3:81566348-81566367 | MS.gene44738:CDS | 30.0% | |
| ATTCTTATCCTTAGAATGGT+GGG | + | chr7.3:81564373-81564392 | None:intergenic | 30.0% | |
| CGAGTTGTATAATTTCAAAG+CGG | + | chr7.3:81564704-81564723 | None:intergenic | 30.0% | |
| CTAGTTGAAACTTGAAAGTA+AGG | + | chr7.3:81566438-81566457 | None:intergenic | 30.0% | |
| TATGATGTTGGACAGTTAAT+TGG | - | chr7.3:81564612-81564631 | MS.gene44738:CDS | 30.0% | |
| TATTCTTATCCTTAGAATGG+TGG | + | chr7.3:81564374-81564393 | None:intergenic | 30.0% | |
| TCAAAATCTGAATCACTATC+TGG | + | chr7.3:81564192-81564211 | None:intergenic | 30.0% | |
| TCCAACAATATTAGAGAGTT+GGG | - | chr7.3:81566130-81566149 | MS.gene44738:CDS | 30.0% | |
| TCTCGTCTATTAATTACTGA+AGG | + | chr7.3:81564348-81564367 | None:intergenic | 30.0% | |
| ! | AAATTTGCACAGATCTGTTT+TGG | + | chr7.3:81567293-81567312 | None:intergenic | 30.0% |
| !! | ATTAATTACTGAAGGCATCA+AGG | + | chr7.3:81564340-81564359 | None:intergenic | 30.0% |
| !! | CTCTTCATATCTTTTCAAGA+TGG | - | chr7.3:81565185-81565204 | MS.gene44738:intron | 30.0% |
| !! | GAGAAACATTTTGATGTTGT+GGG | - | chr7.3:81566905-81566924 | MS.gene44738:CDS | 30.0% |
| !! | TAGTGATTCAGATTTTGATG+AGG | - | chr7.3:81564194-81564213 | MS.gene44738:CDS | 30.0% |
| !! | TGAGAAACATTTTGATGTTG+TGG | - | chr7.3:81566904-81566923 | MS.gene44738:CDS | 30.0% |
| !!! | CTCTTGCTATTTTTAGACTT+AGG | - | chr7.3:81565951-81565970 | MS.gene44738:CDS | 30.0% |
| !!! | TTTTTTACCCTTTCTGAAGA+TGG | - | chr7.3:81564156-81564175 | MS.gene44738:CDS | 30.0% |
| AAAAATTATCGGAGAGGGAT+GGG | - | chr7.3:81567384-81567403 | MS.gene44738:CDS | 35.0% | |
| ACAAGATAGTTCTCAACAAC+AGG | + | chr7.3:81564735-81564754 | None:intergenic | 35.0% | |
| ACAGATCTGTGCAAATTTCT+TGG | - | chr7.3:81567295-81567314 | MS.gene44738:CDS | 35.0% | |
| ACCTCTTGTAGAAAATATGG+TGG | - | chr7.3:81566158-81566177 | MS.gene44738:CDS | 35.0% | |
| AGAGATGTCTTCTGTATTTG+AGG | - | chr7.3:81565253-81565272 | MS.gene44738:intron | 35.0% | |
| AGCACCTCTTGTAGAAAATA+TGG | - | chr7.3:81566155-81566174 | MS.gene44738:CDS | 35.0% | |
| AGGGAAAGAAATTCACAGTA+GGG | - | chr7.3:81566820-81566839 | MS.gene44738:CDS | 35.0% | |
| AGGTTCACAGGTTCAATTAA+TGG | - | chr7.3:81564875-81564894 | MS.gene44738:CDS | 35.0% | |
| AGTAAGTAGAGTAGATCAGA+TGG | - | chr7.3:81566234-81566253 | MS.gene44738:CDS | 35.0% | |
| ATAGTGAGTCTGGATAATCT+TGG | + | chr7.3:81566106-81566125 | None:intergenic | 35.0% | |
| ATCAGAAATGGAGATTCTGA+AGG | - | chr7.3:81565713-81565732 | MS.gene44738:intron | 35.0% | |
| ATTAATTGAACCTGTGAACC+TGG | + | chr7.3:81564876-81564895 | None:intergenic | 35.0% | |
| CAATCAGAAGAAACTGATCA+AGG | - | chr7.3:81567157-81567176 | MS.gene44738:CDS | 35.0% | |
| CCAACAATATTAGAGAGTTG+GGG | - | chr7.3:81566131-81566150 | MS.gene44738:CDS | 35.0% | |
| CCTAGAAAAATTATCGGAGA+GGG | - | chr7.3:81567379-81567398 | MS.gene44738:CDS | 35.0% | |
| CTACTTACTACAGAATCAAC+AGG | + | chr7.3:81566223-81566242 | None:intergenic | 35.0% | |
| GACTTCTATGTAACAGCTAT+AGG | - | chr7.3:81566592-81566611 | MS.gene44738:CDS | 35.0% | |
| GAGCATGCGAATATATTTGA+AGG | + | chr7.3:81565529-81565548 | None:intergenic | 35.0% | |
| GATCAGTTTCTTCTGATTGA+AGG | + | chr7.3:81567156-81567175 | None:intergenic | 35.0% | |
| GCAGAAGTTATAGATACTAG+TGG | - | chr7.3:81566508-81566527 | MS.gene44738:CDS | 35.0% | |
| GGAAGAGAAATTCATGCAAA+GGG | - | chr7.3:81565128-81565147 | MS.gene44738:intron | 35.0% | |
| GTCCAACAATATTAGAGAGT+TGG | - | chr7.3:81566129-81566148 | MS.gene44738:CDS | 35.0% | |
| GTTAGTAATAGGACTCCTAA+GGG | - | chr7.3:81566486-81566505 | MS.gene44738:CDS | 35.0% | |
| GTTTCAACTAGATCTAAGTG+TGG | - | chr7.3:81566447-81566466 | MS.gene44738:CDS | 35.0% | |
| TAAGATGCAGAGGAAAAGAA+AGG | - | chr7.3:81566630-81566649 | MS.gene44738:CDS | 35.0% | |
| TAGAGACCTTCTACCTATAT+CGG | - | chr7.3:81567075-81567094 | MS.gene44738:CDS | 35.0% | |
| TATCTATAACTTCTGCCCTT+AGG | + | chr7.3:81566504-81566523 | None:intergenic | 35.0% | |
| TCAAGTTCTTCCAGTAACAA+TGG | + | chr7.3:81564285-81564304 | None:intergenic | 35.0% | |
| TGAAACTTGAAAGTAAGGAG+AGG | + | chr7.3:81566433-81566452 | None:intergenic | 35.0% | |
| TGATATCAGTTCCTATCAAC+TGG | - | chr7.3:81566777-81566796 | MS.gene44738:CDS | 35.0% | |
| TGTCTTGTCTTACATGATGA+TGG | - | chr7.3:81565500-81565519 | MS.gene44738:intron | 35.0% | |
| TGTTAGTAATAGGACTCCTA+AGG | - | chr7.3:81566485-81566504 | MS.gene44738:CDS | 35.0% | |
| TTCAGAATCTCCATTTCTGA+TGG | + | chr7.3:81565714-81565733 | None:intergenic | 35.0% | |
| TTCCACAATGATGACATTCA+TGG | + | chr7.3:81567257-81567276 | None:intergenic | 35.0% | |
| TTTGTCAGATGACATGATTG+TGG | - | chr7.3:81564968-81564987 | MS.gene44738:intron | 35.0% | |
| ! | ATTGGGATAAAGGATTGGTA+GGG | - | chr7.3:81566662-81566681 | MS.gene44738:CDS | 35.0% |
| ! | CAGAAGATGGAAACATTTTC+AGG | - | chr7.3:81565042-81565061 | MS.gene44738:intron | 35.0% |
| ! | GACAGACTCTTTTATGAACA+TGG | - | chr7.3:81567322-81567341 | MS.gene44738:CDS | 35.0% |
| ! | GTCACTCTACTTCAAGTTAT+GGG | - | chr7.3:81567594-81567613 | MS.gene44738:CDS | 35.0% |
| ! | TAAACAGAGTTTGGTGAATG+AGG | - | chr7.3:81565739-81565758 | MS.gene44738:intron | 35.0% |
| ! | TAATGAGTTGGACCGAAATA+TGG | - | chr7.3:81566319-81566338 | MS.gene44738:CDS | 35.0% |
| ! | TATATTCGCTTTGAACTGCA+AGG | + | chr7.3:81565816-81565835 | None:intergenic | 35.0% |
| ! | TCCACCATATTTTCTACAAG+AGG | + | chr7.3:81566162-81566181 | None:intergenic | 35.0% |
| ! | TGTCACTCTACTTCAAGTTA+TGG | - | chr7.3:81567593-81567612 | MS.gene44738:CDS | 35.0% |
| !!! | TGGATTTTTTCCTTAGACAG+TGG | + | chr7.3:81565479-81565498 | None:intergenic | 35.0% |
| !!! | TTCCTCTTGACTTTTTTGAG+AGG | - | chr7.3:81565648-81565667 | MS.gene44738:intron | 35.0% |
| AAGTAGAGTAGATCAGATGG+AGG | - | chr7.3:81566237-81566256 | MS.gene44738:CDS | 40.0% | |
| AAGTATCTCATGTTCCTCCA+TGG | + | chr7.3:81565393-81565412 | None:intergenic | 40.0% | |
| AATATATTCGCATGCTCCTG+TGG | - | chr7.3:81565532-81565551 | MS.gene44738:intron | 40.0% | |
| AATGTGTTAGAACCACGAAC+AGG | + | chr7.3:81564129-81564148 | None:intergenic | 40.0% | |
| ACATTTAGTGGGATAAGGCT+TGG | - | chr7.3:81566353-81566372 | MS.gene44738:CDS | 40.0% | |
| ACCAAGACTCTCGAATTTCT+TGG | - | chr7.3:81566720-81566739 | MS.gene44738:CDS | 40.0% | |
| ACCTATATCGGATGAAGAAG+AGG | - | chr7.3:81567087-81567106 | MS.gene44738:CDS | 40.0% | |
| ACCTTAAAACCTGTAGGACT+TGG | + | chr7.3:81565782-81565801 | None:intergenic | 40.0% | |
| ACCTTGCAAAGCAAGTTCAA+TGG | + | chr7.3:81564826-81564845 | None:intergenic | 40.0% | |
| AGAACTTGATGTTGAGAGTC+AGG | - | chr7.3:81564296-81564315 | MS.gene44738:CDS | 40.0% | |
| AGATACTTGCTCAGAGTATG+AGG | - | chr7.3:81565405-81565424 | MS.gene44738:intron | 40.0% | |
| ATACATTAGACGGGTGGAAT+GGG | - | chr7.3:81564848-81564867 | MS.gene44738:CDS | 40.0% | |
| ATATATTCGCATGCTCCTGT+GGG | - | chr7.3:81565533-81565552 | MS.gene44738:intron | 40.0% | |
| ATCACACCAGATGTGAAACT+GGG | - | chr7.3:81565680-81565699 | MS.gene44738:intron | 40.0% | |
| ATCCTCACTAAAGCTTATGC+TGG | - | chr7.3:81565611-81565630 | MS.gene44738:intron | 40.0% | |
| ATGGACATGCCACAATTTGA+CGG | - | chr7.3:81566848-81566867 | MS.gene44738:CDS | 40.0% | |
| CAAGATGGTACCACACTATT+AGG | - | chr7.3:81565200-81565219 | MS.gene44738:intron | 40.0% | |
| CACAATGATGACATTCATGG+AGG | + | chr7.3:81567254-81567273 | None:intergenic | 40.0% | |
| CAGGGAAAGAAATTCACAGT+AGG | - | chr7.3:81566819-81566838 | MS.gene44738:CDS | 40.0% | |
| CATCATGTAAGACAAGACAG+TGG | + | chr7.3:81565499-81565518 | None:intergenic | 40.0% | |
| CATTGGAAAGAATTGTTGGC+TGG | - | chr7.3:81565311-81565330 | MS.gene44738:intron | 40.0% | |
| CCAAGACTCTCGAATTTCTT+GGG | - | chr7.3:81566721-81566740 | MS.gene44738:CDS | 40.0% | |
| CCCCAACTCTCTAATATTGT+TGG | + | chr7.3:81566134-81566153 | None:intergenic | 40.0% | |
| CGTTTCACGTTGCATTCATT+TGG | - | chr7.3:81567035-81567054 | MS.gene44738:CDS | 40.0% | |
| CTACTGTGAATTTCTTTCCC+TGG | + | chr7.3:81566821-81566840 | None:intergenic | 40.0% | |
| CTCAAGTCTCACTTAGCAAA+TGG | - | chr7.3:81564513-81564532 | MS.gene44738:CDS | 40.0% | |
| CTCCATGAATGTCATCATTG+TGG | - | chr7.3:81567252-81567271 | MS.gene44738:CDS | 40.0% | |
| CTGATCTCCATCTTCAGAAA+GGG | + | chr7.3:81564166-81564185 | None:intergenic | 40.0% | |
| CTTCATCCGATATAGGTAGA+AGG | + | chr7.3:81567084-81567103 | None:intergenic | 40.0% | |
| CTTGGACAAGAGAATGATTC+TGG | + | chr7.3:81566088-81566107 | None:intergenic | 40.0% | |
| GAAAAATTATCGGAGAGGGA+TGG | - | chr7.3:81567383-81567402 | MS.gene44738:CDS | 40.0% | |
| GAAAGAAATTCACAGTAGGG+GGG | - | chr7.3:81566823-81566842 | MS.gene44738:CDS | 40.0% | |
| GAAGACAAGGTGATTTCTCA+TGG | - | chr7.3:81564405-81564424 | MS.gene44738:CDS | 40.0% | |
| GACAAAGTGAAGTAGTGTAC+TGG | + | chr7.3:81564954-81564973 | None:intergenic | 40.0% | |
| GAGGATACCTTAAAACCTGT+AGG | + | chr7.3:81565788-81565807 | None:intergenic | 40.0% | |
| GATAACATAACTGTCCACCA+GGG | + | chr7.3:81567621-81567640 | None:intergenic | 40.0% | |
| GCCTAGAAAAATTATCGGAG+AGG | - | chr7.3:81567378-81567397 | MS.gene44738:CDS | 40.0% | |
| GGAAAGAAATTCACAGTAGG+GGG | - | chr7.3:81566822-81566841 | MS.gene44738:CDS | 40.0% | |
| GGGAAAGAAATTCACAGTAG+GGG | - | chr7.3:81566821-81566840 | MS.gene44738:CDS | 40.0% | |
| GGGAAGAGAAATTCATGCAA+AGG | - | chr7.3:81565127-81565146 | MS.gene44738:intron | 40.0% | |
| GGTAGAGAATGCAGAAGAAA+TGG | - | chr7.3:81567216-81567235 | MS.gene44738:CDS | 40.0% | |
| GGTTGACTATTCTAATGCCA+AGG | - | chr7.3:81564488-81564507 | MS.gene44738:CDS | 40.0% | |
| GTCCTCTCAAAAAAGTCAAG+AGG | + | chr7.3:81565653-81565672 | None:intergenic | 40.0% | |
| TAAGTGAGACTTGAGATCCT+TGG | + | chr7.3:81564508-81564527 | None:intergenic | 40.0% | |
| TATCAGTTTGGGAGAAGACA+AGG | - | chr7.3:81564392-81564411 | MS.gene44738:CDS | 40.0% | |
| TCCTCTTCTTCATCCGATAT+AGG | + | chr7.3:81567091-81567110 | None:intergenic | 40.0% | |
| TGAAGAAGAGGAATCTGGAT+TGG | - | chr7.3:81567099-81567118 | MS.gene44738:CDS | 40.0% | |
| TGAAGGAGCTAAACAGAGTT+TGG | - | chr7.3:81565730-81565749 | MS.gene44738:intron | 40.0% | |
| TGCAAGGTGCATACATTAGA+CGG | - | chr7.3:81564838-81564857 | MS.gene44738:CDS | 40.0% | |
| TGCATACAAACCACTGTCTA+AGG | - | chr7.3:81565466-81565485 | MS.gene44738:intron | 40.0% | |
| TGTCAGTCAAAGGGAATGTT+GGG | - | chr7.3:81565072-81565091 | MS.gene44738:intron | 40.0% | |
| TGTTGGACAGTTAATTGGTC+AGG | - | chr7.3:81564617-81564636 | MS.gene44738:CDS | 40.0% | |
| TTGTCAGTCAAAGGGAATGT+TGG | - | chr7.3:81565071-81565090 | MS.gene44738:intron | 40.0% | |
| TTTGAACTGCAAGGTGATAG+AGG | + | chr7.3:81565807-81565826 | None:intergenic | 40.0% | |
| ! | AACAAGAAACATTTTGCCCC+GGG | + | chr7.3:81565015-81565034 | None:intergenic | 40.0% |
| ! | AAGAGGAATCTGGATTGGAA+TGG | - | chr7.3:81567104-81567123 | MS.gene44738:CDS | 40.0% |
| ! | AGAGGAATCTGGATTGGAAT+GGG | - | chr7.3:81567105-81567124 | MS.gene44738:CDS | 40.0% |
| ! | ATGCAGTCATACCGACTATA+GGG | + | chr7.3:81565451-81565470 | None:intergenic | 40.0% |
| ! | ATGCATCAGACACTCTCTTT+TGG | + | chr7.3:81567543-81567562 | None:intergenic | 40.0% |
| ! | CAACAAGAAACATTTTGCCC+CGG | + | chr7.3:81565016-81565035 | None:intergenic | 40.0% |
| ! | CCCTCTCCGATAATTTTTCT+AGG | + | chr7.3:81567382-81567401 | None:intergenic | 40.0% |
| ! | GAGAACTATCTTGTTGTAGC+CGG | - | chr7.3:81564741-81564760 | MS.gene44738:CDS | 40.0% |
| ! | GATTGGGATAAAGGATTGGT+AGG | - | chr7.3:81566661-81566680 | MS.gene44738:CDS | 40.0% |
| ! | TATGCAGTCATACCGACTAT+AGG | + | chr7.3:81565452-81565471 | None:intergenic | 40.0% |
| ! | TCCAAGTCCTACAGGTTTTA+AGG | - | chr7.3:81565778-81565797 | MS.gene44738:intron | 40.0% |
| ! | TGCATCAGACACTCTCTTTT+GGG | + | chr7.3:81567542-81567561 | None:intergenic | 40.0% |
| ! | TTCCAGCATAAGCTTTAGTG+AGG | + | chr7.3:81565616-81565635 | None:intergenic | 40.0% |
| ! | TTTTGATGTTGTGGGAACAC+AGG | - | chr7.3:81566913-81566932 | MS.gene44738:CDS | 40.0% |
| !! | AAAGAAAGGCATTCAGGGAT+TGG | - | chr7.3:81566644-81566663 | MS.gene44738:CDS | 40.0% |
| !! | AAGAAAGGCATTCAGGGATT+GGG | - | chr7.3:81566645-81566664 | MS.gene44738:CDS | 40.0% |
| !! | AATTACTGAAGGCATCAAGG+AGG | + | chr7.3:81564337-81564356 | None:intergenic | 40.0% |
| !! | AGAGGAAAAGAAAGGCATTC+AGG | - | chr7.3:81566638-81566657 | MS.gene44738:CDS | 40.0% |
| !! | CTCTTTTGGGGAGGAATTTT+CGG | + | chr7.3:81567529-81567548 | None:intergenic | 40.0% |
| !! | CTTGTTGTTCTGTCAGAAGA+TGG | - | chr7.3:81565029-81565048 | MS.gene44738:intron | 40.0% |
| !! | GAGGAAAAGAAAGGCATTCA+GGG | - | chr7.3:81566639-81566658 | MS.gene44738:CDS | 40.0% |
| AAAGAAGCTGCATCAGAGCT+TGG | + | chr7.3:81565230-81565249 | None:intergenic | 45.0% | |
| AAGCTCTCGAATTCTTGGAG+GGG | - | chr7.3:81566692-81566711 | MS.gene44738:CDS | 45.0% | |
| AAGTTGCCAAAGACGCACTT+AGG | + | chr7.3:81565907-81565926 | None:intergenic | 45.0% | |
| AATTCACAGTAGGGGGGAAA+TGG | - | chr7.3:81566829-81566848 | MS.gene44738:CDS | 45.0% | |
| ACAAACACATCTGGATCTGG+CGG | + | chr7.3:81567451-81567470 | None:intergenic | 45.0% | |
| ACCACAAACACATCTGGATC+TGG | + | chr7.3:81567454-81567473 | None:intergenic | 45.0% | |
| ACTCATTCAGACAGCAGAAG+AGG | - | chr7.3:81567189-81567208 | MS.gene44738:CDS | 45.0% | |
| AGACCAAGCTCTCGAATTCT+TGG | - | chr7.3:81566687-81566706 | MS.gene44738:CDS | 45.0% | |
| AGTCAGATCACTAGAGGCAA+AGG | - | chr7.3:81566262-81566281 | MS.gene44738:CDS | 45.0% | |
| ATTCTCTATACAGCTTCCCG+GGG | - | chr7.3:81564996-81565015 | MS.gene44738:intron | 45.0% | |
| CAAGATATATGACCTGTCCC+TGG | - | chr7.3:81564917-81564936 | MS.gene44738:intron | 45.0% | |
| CAAGCTCTCGAATTCTTGGA+GGG | - | chr7.3:81566691-81566710 | MS.gene44738:CDS | 45.0% | |
| CAGGGATTGGGATAAAGGAT+TGG | - | chr7.3:81566657-81566676 | MS.gene44738:CDS | 45.0% | |
| CATACATTAGACGGGTGGAA+TGG | - | chr7.3:81564847-81564866 | MS.gene44738:CDS | 45.0% | |
| CATCACACCAGATGTGAAAC+TGG | - | chr7.3:81565679-81565698 | MS.gene44738:intron | 45.0% | |
| CATTCTCTATACAGCTTCCC+GGG | - | chr7.3:81564995-81565014 | MS.gene44738:intron | 45.0% | |
| CCATTCTCTATACAGCTTCC+CGG | - | chr7.3:81564994-81565013 | MS.gene44738:intron | 45.0% | |
| CCCAAGAAATTCGAGAGTCT+TGG | + | chr7.3:81566724-81566743 | None:intergenic | 45.0% | |
| CTAGAAAGTCCAAGTCCTAC+AGG | - | chr7.3:81565770-81565789 | MS.gene44738:intron | 45.0% | |
| CTCTTCACCACAAACACATC+TGG | + | chr7.3:81567460-81567479 | None:intergenic | 45.0% | |
| CTGCTCTGATACCAGTTGAT+AGG | + | chr7.3:81566791-81566810 | None:intergenic | 45.0% | |
| GACCTGACAATCCTCATAAC+CGG | + | chr7.3:81564763-81564782 | None:intergenic | 45.0% | |
| GAGGATAGTCAGATCACTAG+AGG | - | chr7.3:81566256-81566275 | MS.gene44738:CDS | 45.0% | |
| GAGTAGTGTGTTCGAATCGA+GGG | - | chr7.3:81567348-81567367 | MS.gene44738:CDS | 45.0% | |
| GATGTGTTTGTGGTGAAGAG+TGG | - | chr7.3:81567460-81567479 | MS.gene44738:CDS | 45.0% | |
| GATTGAAGGCTGAATGTGTG+AGG | + | chr7.3:81567142-81567161 | None:intergenic | 45.0% | |
| GCAAAGCAAGTTCAATGGCA+AGG | + | chr7.3:81564821-81564840 | None:intergenic | 45.0% | |
| GCAAGGTGCATACATTAGAC+GGG | - | chr7.3:81564839-81564858 | MS.gene44738:CDS | 45.0% | |
| GCATTCAGGGATTGGGATAA+AGG | - | chr7.3:81566652-81566671 | MS.gene44738:CDS | 45.0% | |
| GCTGATCTCCATCTTCAGAA+AGG | + | chr7.3:81564167-81564186 | None:intergenic | 45.0% | |
| GGAGAATGTGAACACTGAAG+AGG | + | chr7.3:81566412-81566431 | None:intergenic | 45.0% | |
| GGATAACATAACTGTCCACC+AGG | + | chr7.3:81567622-81567641 | None:intergenic | 45.0% | |
| GGTAGAAGGTCTCTATACTC+TGG | + | chr7.3:81567070-81567089 | None:intergenic | 45.0% | |
| GTCAGTCAAAGGGAATGTTG+GGG | - | chr7.3:81565073-81565092 | MS.gene44738:intron | 45.0% | |
| GTTGGACAAGATAGTGAGTC+TGG | + | chr7.3:81566116-81566135 | None:intergenic | 45.0% | |
| TACTGGACTGATGTTGTCCA+GGG | + | chr7.3:81564937-81564956 | None:intergenic | 45.0% | |
| TCAGACAGCAGAAGAGGAAA+AGG | - | chr7.3:81567195-81567214 | MS.gene44738:CDS | 45.0% | |
| TCAGTGTTAGTGTACGAGGT+CGG | - | chr7.3:81564556-81564575 | MS.gene44738:CDS | 45.0% | |
| TCATAGCCTAAGTGCGTCTT+TGG | - | chr7.3:81565898-81565917 | MS.gene44738:intron | 45.0% | |
| TCGGATGAAGAAGAGGAATC+TGG | - | chr7.3:81567094-81567113 | MS.gene44738:CDS | 45.0% | |
| TCGTACACTAACACTGAGCA+AGG | + | chr7.3:81564553-81564572 | None:intergenic | 45.0% | |
| TGAAGTAGAGTGACAGAGCA+AGG | + | chr7.3:81567588-81567607 | None:intergenic | 45.0% | |
| TGAGTAGTGTGTTCGAATCG+AGG | - | chr7.3:81567347-81567366 | MS.gene44738:CDS | 45.0% | |
| TTCCAATGATGTACTCCAGC+AGG | + | chr7.3:81565299-81565318 | None:intergenic | 45.0% | |
| TTCTGCACTTGCAGTATCCA+TGG | - | chr7.3:81565373-81565392 | MS.gene44738:intron | 45.0% | |
| TTGCTCAGTGTTAGTGTACG+AGG | - | chr7.3:81564552-81564571 | MS.gene44738:CDS | 45.0% | |
| ! | AAAGAATTGTTGGCTGGCAG+TGG | - | chr7.3:81565317-81565336 | MS.gene44738:intron | 45.0% |
| ! | ATCAGAGCAGTTCTGATCCA+GGG | - | chr7.3:81566801-81566820 | MS.gene44738:CDS | 45.0% |
| ! | ATCCTCTGGTTTGATCGAAC+TGG | - | chr7.3:81567486-81567505 | MS.gene44738:CDS | 45.0% |
| ! | CAGAGTATGAGGCATTCAGT+GGG | - | chr7.3:81565416-81565435 | MS.gene44738:intron | 45.0% |
| ! | CAGAGTTTGGTGAATGAGGA+TGG | - | chr7.3:81565743-81565762 | MS.gene44738:intron | 45.0% |
| ! | GAGGAATTTTCGGCAGCAAT+AGG | + | chr7.3:81567519-81567538 | None:intergenic | 45.0% |
| ! | GCATCAGACACTCTCTTTTG+GGG | + | chr7.3:81567541-81567560 | None:intergenic | 45.0% |
| ! | GCCATTGAACTTGCTTTGCA+AGG | - | chr7.3:81564822-81564841 | MS.gene44738:CDS | 45.0% |
| ! | TACTTCAAGTTATGGGACCC+TGG | - | chr7.3:81567601-81567620 | MS.gene44738:CDS | 45.0% |
| ! | TATCAGAGCAGTTCTGATCC+AGG | - | chr7.3:81566800-81566819 | MS.gene44738:CDS | 45.0% |
| ! | TCAGAGTATGAGGCATTCAG+TGG | - | chr7.3:81565415-81565434 | MS.gene44738:intron | 45.0% |
| ! | TCTTGTTGTAGCCGGTTATG+AGG | - | chr7.3:81564749-81564768 | MS.gene44738:CDS | 45.0% |
| ! | TGCAGTCATACCGACTATAG+GGG | + | chr7.3:81565450-81565469 | None:intergenic | 45.0% |
| !! | AGGTTCGAGTTGTCAGTCAA+AGG | - | chr7.3:81565062-81565081 | MS.gene44738:intron | 45.0% |
| !! | GGTTCGAGTTGTCAGTCAAA+GGG | - | chr7.3:81565063-81565082 | MS.gene44738:intron | 45.0% |
| !! | GTGAAGAGTGGATTATCCTC+TGG | - | chr7.3:81567472-81567491 | MS.gene44738:CDS | 45.0% |
| ACACCAGATGTGAAACTGGG+TGG | - | chr7.3:81565683-81565702 | MS.gene44738:intron | 50.0% | |
| ACGAGACTCCCACCATTCTA+AGG | - | chr7.3:81564362-81564381 | MS.gene44738:CDS | 50.0% | |
| AGCCGGTTATGAGGATTGTC+AGG | - | chr7.3:81564758-81564777 | MS.gene44738:CDS | 50.0% | |
| AGCTGTCACAGGAGAAATGG+TGG | + | chr7.3:81564643-81564662 | None:intergenic | 50.0% | |
| AGGTGCATACATTAGACGGG+TGG | - | chr7.3:81564842-81564861 | MS.gene44738:CDS | 50.0% | |
| ATGCCACAATTTGACGGCAG+TGG | - | chr7.3:81566854-81566873 | MS.gene44738:CDS | 50.0% | |
| CACCACGAGGATTCAATGTC+AGG | + | chr7.3:81564785-81564804 | None:intergenic | 50.0% | |
| CCAAGCTCTCGAATTCTTGG+AGG | - | chr7.3:81566690-81566709 | MS.gene44738:CDS | 50.0% | |
| CCGGGAAGCTGTATAGAGAA+TGG | + | chr7.3:81564997-81565016 | None:intergenic | 50.0% | |
| CCTCCAAGAATTCGAGAGCT+TGG | + | chr7.3:81566693-81566712 | None:intergenic | 50.0% | |
| CGATCAATCACTTCACCACG+AGG | + | chr7.3:81564798-81564817 | None:intergenic | 50.0% | |
| GAAAGTAAGATGCGACCTGC+TGG | - | chr7.3:81565281-81565300 | MS.gene44738:intron | 50.0% | |
| GACCTGCTGGAGTACATCAT+TGG | - | chr7.3:81565294-81565313 | MS.gene44738:intron | 50.0% | |
| GATAACAGTGCACCTGTTCG+TGG | - | chr7.3:81564114-81564133 | MS.gene44738:CDS | 50.0% | |
| GATGTTGTGGGAACACAGGA+GGG | - | chr7.3:81566917-81566936 | MS.gene44738:CDS | 50.0% | |
| GCCAGATCCAGATGTGTTTG+TGG | - | chr7.3:81567450-81567469 | MS.gene44738:CDS | 50.0% | |
| GCTTGGTCGACCTAATAGTG+TGG | + | chr7.3:81565213-81565232 | None:intergenic | 50.0% | |
| GTACTGGACTGATGTTGTCC+AGG | + | chr7.3:81564938-81564957 | None:intergenic | 50.0% | |
| GTCAGCTGTCACAGGAGAAA+TGG | + | chr7.3:81564646-81564665 | None:intergenic | 50.0% | |
| GTCCTGACATTGAATCCTCG+TGG | - | chr7.3:81564780-81564799 | MS.gene44738:CDS | 50.0% | |
| TCACCACCCAGTTTCACATC+TGG | + | chr7.3:81565689-81565708 | None:intergenic | 50.0% | |
| TCACCACTGCCGTCAAATTG+TGG | + | chr7.3:81566860-81566879 | None:intergenic | 50.0% | |
| TGATGTTGTGGGAACACAGG+AGG | - | chr7.3:81566916-81566935 | MS.gene44738:CDS | 50.0% | |
| TGCACTTGCAGTATCCATGG+AGG | - | chr7.3:81565376-81565395 | MS.gene44738:intron | 50.0% | |
| TGCCAGTTCGATCAAACCAG+AGG | + | chr7.3:81567491-81567510 | None:intergenic | 50.0% | |
| TGGGTTTCACTCGAGTTTGG+CGG | - | chr7.3:81567403-81567422 | MS.gene44738:CDS | 50.0% | |
| ! | AGTCATACCGACTATAGGGG+AGG | + | chr7.3:81565447-81565466 | None:intergenic | 50.0% |
| ! | GGATGGGTTTCACTCGAGTT+TGG | - | chr7.3:81567400-81567419 | MS.gene44738:CDS | 50.0% |
| ! | TTCAAGTTATGGGACCCTGG+TGG | - | chr7.3:81567604-81567623 | MS.gene44738:CDS | 50.0% |
| !! | TCAGACACTCTCTTTTGGGG+AGG | + | chr7.3:81567538-81567557 | None:intergenic | 50.0% |
| !! | TTGGTCTTGTCAGCTGTCAC+AGG | + | chr7.3:81564654-81564673 | None:intergenic | 50.0% |
| ACAGGAGGGTGAGAAGTTGC+TGG | - | chr7.3:81566931-81566950 | MS.gene44738:CDS | 55.0% | |
| ACATCTGGATCTGGCGGCTT+TGG | + | chr7.3:81567445-81567464 | None:intergenic | 55.0% | |
| ACTGCCACCATACGAGAGCA+CGG | + | chr7.3:81566979-81566998 | None:intergenic | 55.0% | |
| GAAACCGTGCTCTCGTATGG+TGG | - | chr7.3:81566972-81566991 | MS.gene44738:CDS | 55.0% | |
| GACTGATGTTGTCCAGGGAC+AGG | + | chr7.3:81564932-81564951 | None:intergenic | 55.0% | |
| GATGCCATCCACATGCGAGT+TGG | - | chr7.3:81567008-81567027 | MS.gene44738:CDS | 55.0% | |
| GGTTCAGCCTCCCCTATAGT+CGG | - | chr7.3:81565437-81565456 | MS.gene44738:intron | 55.0% | |
| TGCGAAACCGTGCTCTCGTA+TGG | - | chr7.3:81566969-81566988 | MS.gene44738:CDS | 55.0% | |
| ! | ACGGCAGTGGTGACGCTTAT+TGG | - | chr7.3:81566867-81566886 | MS.gene44738:CDS | 55.0% |
| ! | GCAGTGGTGACGCTTATTGG+TGG | - | chr7.3:81566870-81566889 | MS.gene44738:CDS | 55.0% |
| ! | GGAATGGGTTCCAGGTTCAC+AGG | - | chr7.3:81564863-81564882 | MS.gene44738:CDS | 55.0% |
| ! | GGTGGTGACGCCATCAGAAA+TGG | - | chr7.3:81565701-81565720 | MS.gene44738:intron | 55.0% |
| ! | TACGAGAGCACGGTTTCGCA+AGG | + | chr7.3:81566969-81566988 | None:intergenic | 55.0% |
| AACGCTCGCCAACTCGCATG+TGG | + | chr7.3:81567019-81567038 | None:intergenic | 60.0% | |
| ACACCAGCATCCACACCCAC+AGG | + | chr7.3:81565551-81565570 | None:intergenic | 60.0% | |
| CTCGCCAACTCGCATGTGGA+TGG | + | chr7.3:81567015-81567034 | None:intergenic | 60.0% | |
| CTCTCGTATGGTGGCAGTGG+TGG | - | chr7.3:81566981-81567000 | MS.gene44738:CDS | 60.0% | |
| GCTTTGGCAACGGTGGAGGT+AGG | + | chr7.3:81567429-81567448 | None:intergenic | 60.0% | |
| GGAGGGTGAGAAGTTGCTGG+AGG | - | chr7.3:81566934-81566953 | MS.gene44738:CDS | 60.0% | |
| GGGTGAGAAGTTGCTGGAGG+CGG | - | chr7.3:81566937-81566956 | MS.gene44738:CDS | 60.0% | |
| GTGCTCTCGTATGGTGGCAG+TGG | - | chr7.3:81566978-81566997 | MS.gene44738:CDS | 60.0% | |
| TTCGCATGCTCCTGTGGGTG+TGG | - | chr7.3:81565538-81565557 | MS.gene44738:intron | 60.0% | |
| ! | AGACGGGTGGAATGGGTTCC+AGG | - | chr7.3:81564855-81564874 | MS.gene44738:CDS | 60.0% |
| ! | GGATCTGGCGGCTTTGGCAA+CGG | + | chr7.3:81567439-81567458 | None:intergenic | 60.0% |
| !! | GGTCGGCTTGCTGTTGGTGA+AGG | - | chr7.3:81564573-81564592 | MS.gene44738:CDS | 60.0% |
| !! | GTACGAGGTCGGCTTGCTGT+TGG | - | chr7.3:81564567-81564586 | MS.gene44738:CDS | 60.0% |
| GCTCCTGTGGGTGTGGATGC+TGG | - | chr7.3:81565545-81565564 | MS.gene44738:intron | 65.0% | |
| ! | TCTGGCGGCTTTGGCAACGG+TGG | + | chr7.3:81567436-81567455 | None:intergenic | 65.0% |
| ! | GGCGGCTTTGGCAACGGTGG+AGG | + | chr7.3:81567433-81567452 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 81564087 | 81567651 | 81564087 | ID=MS.gene44738 |
| chr7.3 | mRNA | 81564087 | 81567651 | 81564087 | ID=MS.gene44738.t1;Parent=MS.gene44738 |
| chr7.3 | exon | 81565939 | 81567651 | 81565939 | ID=MS.gene44738.t1.exon1;Parent=MS.gene44738.t1 |
| chr7.3 | CDS | 81565939 | 81567651 | 81565939 | ID=cds.MS.gene44738.t1;Parent=MS.gene44738.t1 |
| chr7.3 | exon | 81564087 | 81564932 | 81564087 | ID=MS.gene44738.t1.exon2;Parent=MS.gene44738.t1 |
| chr7.3 | CDS | 81564087 | 81564932 | 81564087 | ID=cds.MS.gene44738.t1;Parent=MS.gene44738.t1 |
| Gene Sequence |
| Protein sequence |
