Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44889.t1 | XP_003615614.1 | 91.6 | 238 | 20 | 0 | 1 | 238 | 1 | 238 | 7.10E-105 | 391 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44889.t1 | Q9SD61 | 70.9 | 165 | 48 | 0 | 1 | 165 | 1 | 165 | 3.4e-63 | 243.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44889.t1 | G7K6D4 | 91.6 | 238 | 20 | 0 | 1 | 238 | 1 | 238 | 5.1e-105 | 391.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene44889 | MS.gene050322 | PPI |
| MS.gene44889 | MS.gene007227 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44889.t1 | MTR_5g070100 | 89.663 | 416 | 20 | 1 | 1 | 416 | 1 | 393 | 0.0 | 698 |
| MS.gene44889.t1 | MTR_3g005670 | 37.500 | 72 | 45 | 0 | 38 | 109 | 412 | 483 | 1.89e-11 | 66.2 |
| MS.gene44889.t1 | MTR_3g005670 | 37.500 | 72 | 45 | 0 | 38 | 109 | 410 | 481 | 2.15e-11 | 66.2 |
| MS.gene44889.t1 | MTR_3g005670 | 37.500 | 72 | 45 | 0 | 38 | 109 | 412 | 483 | 2.29e-11 | 65.9 |
| MS.gene44889.t1 | MTR_3g005670 | 37.500 | 72 | 45 | 0 | 38 | 109 | 410 | 481 | 3.46e-11 | 65.5 |
| MS.gene44889.t1 | MTR_3g005670 | 37.500 | 72 | 45 | 0 | 38 | 109 | 412 | 483 | 3.69e-11 | 65.5 |
| MS.gene44889.t1 | MTR_3g005670 | 37.500 | 72 | 45 | 0 | 38 | 109 | 410 | 481 | 7.33e-11 | 64.3 |
| MS.gene44889.t1 | MTR_3g005670 | 37.500 | 72 | 45 | 0 | 38 | 109 | 412 | 483 | 7.95e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44889.t1 | AT3G47120 | 66.827 | 208 | 67 | 1 | 1 | 206 | 1 | 208 | 5.96e-97 | 292 |
| MS.gene44889.t1 | AT3G47120 | 78.182 | 165 | 36 | 0 | 1 | 165 | 1 | 165 | 1.31e-94 | 288 |
| MS.gene44889.t1 | AT4G36690 | 30.534 | 131 | 86 | 2 | 18 | 148 | 343 | 468 | 5.25e-13 | 71.2 |
| MS.gene44889.t1 | AT4G36690 | 30.534 | 131 | 86 | 2 | 18 | 148 | 321 | 446 | 5.51e-13 | 70.9 |
| MS.gene44889.t1 | AT4G36690 | 30.534 | 131 | 86 | 2 | 18 | 148 | 343 | 468 | 6.78e-13 | 70.9 |
| MS.gene44889.t1 | AT4G36690 | 30.534 | 131 | 86 | 2 | 18 | 148 | 343 | 468 | 8.79e-13 | 70.5 |
| MS.gene44889.t1 | AT5G19960 | 35.443 | 79 | 50 | 1 | 34 | 112 | 5 | 82 | 1.52e-11 | 65.9 |
| MS.gene44889.t1 | AT5G64200 | 42.105 | 76 | 44 | 0 | 34 | 109 | 14 | 89 | 5.08e-11 | 63.9 |
| MS.gene44889.t1 | AT5G64200 | 42.105 | 76 | 44 | 0 | 34 | 109 | 14 | 89 | 5.08e-11 | 63.9 |
| MS.gene44889.t1 | AT1G60900 | 38.889 | 72 | 44 | 0 | 38 | 109 | 377 | 448 | 8.92e-11 | 64.3 |
Find 105 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGTTTCAGGTAGGATTATT+AGG | 0.141562 | 5.2:-59350141 | MS.gene44889:CDS |
| GCCATACCTTCTTTCTTTAC+TGG | 0.145333 | 5.2:+59347425 | None:intergenic |
| AGGCGGGATGTTGATGATTT+TGG | 0.164510 | 5.2:-59346934 | MS.gene44889:CDS |
| AGGCGGGATGTTGATGATTT+TGG | 0.164510 | 5.2:-59347003 | MS.gene44889:CDS |
| CTGAATGGAGCTCAGGTTTC+AGG | 0.203125 | 5.2:-59350154 | MS.gene44889:CDS |
| GTCAGAATCATTTCTTCCTT+TGG | 0.232167 | 5.2:+59346765 | None:intergenic |
| CTGAGCCAAGAGATCATAAA+AGG | 0.251327 | 5.2:-59347113 | MS.gene44889:CDS |
| GAATCTCTATCTCTAGTTTC+TGG | 0.272752 | 5.2:+59347381 | None:intergenic |
| CTCTCTTCTATCATTTCTCT+TGG | 0.283326 | 5.2:+59347314 | None:intergenic |
| CTTCTATCATTTCTCTTGGA+TGG | 0.294203 | 5.2:+59347318 | None:intergenic |
| CTGATCTTAGAGAAGATAAA+AGG | 0.316160 | 5.2:-59346963 | MS.gene44889:CDS |
| CCATACCTTCTTTCTTTACT+GGG | 0.318208 | 5.2:+59347426 | None:intergenic |
| CAAGGAATGGTTATGATGAT+AGG | 0.321506 | 5.2:-59347140 | MS.gene44889:CDS |
| CTCCTTTGCCGATCTTCTCT+TGG | 0.324973 | 5.2:+59347177 | None:intergenic |
| CACGAGTACACTCCCCTCTT+TGG | 0.331022 | 5.2:+59350026 | None:intergenic |
| GGTTTCAGGTAGGATTATTA+GGG | 0.354453 | 5.2:-59350140 | MS.gene44889:CDS |
| TCTCAATTGCCATTACCTTC+TGG | 0.356668 | 5.2:+59346723 | None:intergenic |
| TTCTATCATTTCTCTTGGAT+GGG | 0.358687 | 5.2:+59347319 | None:intergenic |
| TTGTAGAGAGCTGCAAATAC+TGG | 0.385773 | 5.2:-59347498 | MS.gene44889:intron |
| ACATAAGCGAAGACGCTTCA+TGG | 0.386973 | 5.2:-59350889 | MS.gene44889:CDS |
| AAGAGGAAGCAAAGCAGAAA+AGG | 0.403194 | 5.2:-59350075 | MS.gene44889:CDS |
| GGAGGCCCGTGGTGTTTGTC+GGG | 0.415526 | 5.2:-59350053 | MS.gene44889:CDS |
| CTAGTTTCTGGAATACGATC+TGG | 0.419183 | 5.2:+59347393 | None:intergenic |
| CAAGAGAAACACACGGTAGC+AGG | 0.422317 | 5.2:-59346903 | MS.gene44889:CDS |
| GGGAGGCCCGTGGTGTTTGT+CGG | 0.430962 | 5.2:-59350054 | MS.gene44889:CDS |
| GGTCAAGAGAAGATCATGAT+AGG | 0.447825 | 5.2:-59346834 | MS.gene44889:CDS |
| TCATCAACATCCCGCCTACT+TGG | 0.448056 | 5.2:+59346940 | None:intergenic |
| TCATCAACATCCCGCCTACT+TGG | 0.449138 | 5.2:+59347009 | None:intergenic |
| TGATCAGAATCTCTTGACTT+AGG | 0.458844 | 5.2:+59347048 | None:intergenic |
| GGTGATAACGGGATTGCAAA+AGG | 0.465841 | 5.2:-59347471 | MS.gene44889:CDS |
| CTTGTAAGAGACAAAGGTAC+TGG | 0.467775 | 5.2:-59350572 | MS.gene44889:CDS |
| GAGAGCTGCAAATACTGGTT+GGG | 0.469783 | 5.2:-59347493 | MS.gene44889:CDS |
| ATACTGGTTGGGGTGATAAC+GGG | 0.475497 | 5.2:-59347482 | MS.gene44889:CDS |
| AATACTGGTTGGGGTGATAA+CGG | 0.477693 | 5.2:-59347483 | MS.gene44889:CDS |
| GGGGAGTGTACTCGTGGAGC+TGG | 0.482249 | 5.2:-59350019 | MS.gene44889:CDS |
| TCATCATCTTGATAGTCTCT+TGG | 0.486677 | 5.2:+59347213 | None:intergenic |
| TTCTTTGATCTTCATATGCT+AGG | 0.490743 | 5.2:+59350528 | None:intergenic |
| GTGATAACGGGATTGCAAAA+GGG | 0.493742 | 5.2:-59347470 | MS.gene44889:CDS |
| GAGATCATAAAAGGGAAGAC+AGG | 0.495058 | 5.2:-59347104 | MS.gene44889:CDS |
| AGATGGCGATAGTAAATTTG+TGG | 0.496993 | 5.2:-59347271 | MS.gene44889:CDS |
| GGAGAGAAGAAATGAGATCA+AGG | 0.498844 | 5.2:-59347158 | MS.gene44889:CDS |
| TGCGCTTCACCAGTGTTAGC+GGG | 0.500198 | 5.2:+59350945 | None:intergenic |
| GATGGAGGAGGAAGATGAAG+AGG | 0.505631 | 5.2:-59350092 | MS.gene44889:CDS |
| AGATAATCTGAATGGAGCTC+AGG | 0.511594 | 5.2:-59350161 | MS.gene44889:CDS |
| AGATAAAAGGCCAAGTAGGC+GGG | 0.513506 | 5.2:-59346950 | MS.gene44889:CDS |
| CCCAGTAAAGAAAGAAGGTA+TGG | 0.517066 | 5.2:-59347426 | MS.gene44889:CDS |
| TTTGTCGGGCTTTCCAAAGA+GGG | 0.528141 | 5.2:-59350039 | MS.gene44889:CDS |
| TTCAGGTAGGATTATTAGGG+TGG | 0.532632 | 5.2:-59350137 | MS.gene44889:CDS |
| GATGGCGATAGTAAATTTGT+GGG | 0.534981 | 5.2:-59347270 | MS.gene44889:CDS |
| AAGGAATGGTTATGATGATA+GGG | 0.535419 | 5.2:-59347139 | MS.gene44889:CDS |
| AGAAGCACTAATCTTGCTGT+TGG | 0.536662 | 5.2:-59350509 | MS.gene44889:intron |
| CTGACCAAAGAGAAGAAAAG+AGG | 0.537828 | 5.2:-59346747 | MS.gene44889:CDS |
| TAAATATAAGAAGATGGAGG+AGG | 0.542000 | 5.2:-59350104 | MS.gene44889:CDS |
| TGATAACGGGATTGCAAAAG+GGG | 0.543460 | 5.2:-59347469 | MS.gene44889:CDS |
| GAGAGGAAAAGATGTTGCGA+AGG | 0.544047 | 5.2:-59347296 | MS.gene44889:CDS |
| TGTTGATAAATATAAGAAGA+TGG | 0.544702 | 5.2:-59350110 | MS.gene44889:CDS |
| ATGCGCTTCACCAGTGTTAG+CGG | 0.545822 | 5.2:+59350944 | None:intergenic |
| GGGGATAATGACAAATATGA+TGG | 0.546189 | 5.2:-59347450 | MS.gene44889:CDS |
| AGAGGAAGCAAAGCAGAAAA+GGG | 0.556582 | 5.2:-59350074 | MS.gene44889:CDS |
| AACAATTGCCAAGAGAAGAT+CGG | 0.556675 | 5.2:-59347185 | MS.gene44889:CDS |
| AGATAAAAGACCAAGTAGGC+GGG | 0.557243 | 5.2:-59347019 | MS.gene44889:CDS |
| CACACGGTAGCAGGGAAGAG+AGG | 0.558042 | 5.2:-59346894 | MS.gene44889:CDS |
| AGAGAGCTGCAAATACTGGT+TGG | 0.561675 | 5.2:-59347494 | MS.gene44889:CDS |
| GAGAAGAAAAGAGGTCCAGA+AGG | 0.562940 | 5.2:-59346738 | MS.gene44889:CDS |
| ATTCCCTTCGATTTCACCGA+GGG | 0.563908 | 5.2:-59350824 | MS.gene44889:CDS |
| GAAGAAATGAGATCAAGGAA+TGG | 0.564228 | 5.2:-59347153 | MS.gene44889:CDS |
| GAGAAGATAAAAGGCCAAGT+AGG | 0.565298 | 5.2:-59346954 | MS.gene44889:CDS |
| AAGAGAAACACACGGTAGCA+GGG | 0.569250 | 5.2:-59346902 | MS.gene44889:CDS |
| TGAGCCAAGAGATCATAAAA+GGG | 0.569269 | 5.2:-59347112 | MS.gene44889:CDS |
| ATGGTCCCAGTAAAGAAAGA+AGG | 0.572440 | 5.2:-59347431 | MS.gene44889:CDS |
| ATTAATCTTGTAAGAGACAA+AGG | 0.574059 | 5.2:-59350578 | MS.gene44889:CDS |
| AAAAGAGGTCCAGAAGGTAA+TGG | 0.576819 | 5.2:-59346732 | None:intergenic |
| CAGAGCCCGTGAAAATGAGA+TGG | 0.577175 | 5.2:-59347352 | MS.gene44889:CDS |
| GTTTGTCGGGCTTTCCAAAG+AGG | 0.577376 | 5.2:-59350040 | MS.gene44889:CDS |
| CAAAGGTACTGGAAAATCGA+AGG | 0.580701 | 5.2:-59350561 | MS.gene44889:CDS |
| ATCACCCTCGGTGAAATCGA+AGG | 0.587004 | 5.2:+59350820 | None:intergenic |
| AGAGCTGCAAATACTGGTTG+GGG | 0.591634 | 5.2:-59347492 | MS.gene44889:CDS |
| AAGATAAAAGGCCAAGTAGG+CGG | 0.592227 | 5.2:-59346951 | MS.gene44889:CDS |
| TGTGTCACAGATAATCTGAA+TGG | 0.593295 | 5.2:-59350169 | MS.gene44889:intron |
| GAGAAGATAAAAGACCAAGT+AGG | 0.594924 | 5.2:-59347023 | MS.gene44889:CDS |
| TGCCAAGAGAAGATCGGCAA+AGG | 0.602431 | 5.2:-59347179 | MS.gene44889:CDS |
| AAGATGTTGCGAAGGCAAGA+TGG | 0.607367 | 5.2:-59347288 | MS.gene44889:CDS |
| TCATGATCTTCTCTTGACCT+CGG | 0.607853 | 5.2:+59346838 | None:intergenic |
| TTGTCGGGCTTTCCAAAGAG+GGG | 0.608582 | 5.2:-59350038 | MS.gene44889:CDS |
| TCACCCTCGGTGAAATCGAA+GGG | 0.609691 | 5.2:+59350821 | None:intergenic |
| GGAAGCAAAGCAGAAAAGGG+AGG | 0.609716 | 5.2:-59350071 | MS.gene44889:CDS |
| CAAGAGAAATGATAGAAGAG+AGG | 0.610710 | 5.2:-59347313 | MS.gene44889:CDS |
| AAAGGTACTGGAAAATCGAA+GGG | 0.617678 | 5.2:-59350560 | MS.gene44889:CDS |
| AGACATGAACCCGCTAACAC+TGG | 0.618621 | 5.2:-59350954 | None:intergenic |
| AAGATAAAAGACCAAGTAGG+CGG | 0.618731 | 5.2:-59347020 | MS.gene44889:CDS |
| GAAAGCCCGACAAACACCAC+GGG | 0.618848 | 5.2:+59350048 | None:intergenic |
| ATCATAAAAGGGAAGACAGG+AGG | 0.621506 | 5.2:-59347101 | MS.gene44889:CDS |
| AACAGCGATCACATCACCCT+CGG | 0.630240 | 5.2:+59350808 | None:intergenic |
| ACTGATCGATCTGAATCCAA+AGG | 0.632548 | 5.2:-59346781 | MS.gene44889:CDS |
| CAAAGAGGGGAGTGTACTCG+TGG | 0.640039 | 5.2:-59350025 | MS.gene44889:CDS |
| GTTGGTGATATCCAGGTATG+GGG | 0.640744 | 5.2:-59350612 | MS.gene44889:intron |
| GGAAAGCCCGACAAACACCA+CGG | 0.645236 | 5.2:+59350047 | None:intergenic |
| GGTGATATCCAGGTATGGGG+AGG | 0.647940 | 5.2:-59350609 | MS.gene44889:intron |
| ACCACCGACGAAAACATAAG+CGG | 0.664303 | 5.2:+59350847 | None:intergenic |
| TGATAAATATAAGAAGATGG+AGG | 0.665787 | 5.2:-59350107 | MS.gene44889:CDS |
| ATGGAGCTCAGGTTTCAGGT+AGG | 0.666007 | 5.2:-59350150 | MS.gene44889:CDS |
| AAGCAGAAAAGGGAGGCCCG+TGG | 0.687506 | 5.2:-59350064 | MS.gene44889:CDS |
| TATTCCCTTCGATTTCACCG+AGG | 0.720373 | 5.2:-59350825 | MS.gene44889:CDS |
| CTGACGATGAATCTATGCCG+AGG | 0.725370 | 5.2:-59346855 | MS.gene44889:CDS |
| AGCAAGTCAAGAGAAACACA+CGG | 0.752914 | 5.2:-59346910 | MS.gene44889:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTAATTTAATTTAA+TGG | - | chr5.2:59349018-59349037 | MS.gene44889:intron | 0.0% |
| !! | TTCAAAAAATAATCAAATAT+CGG | - | chr5.2:59348658-59348677 | MS.gene44889:intron | 10.0% |
| !!! | TGGATATTATTTATATTTTA+AGG | - | chr5.2:59348303-59348322 | MS.gene44889:intron | 10.0% |
| !!! | TTTTAATTTAATTTAATGGT+TGG | - | chr5.2:59349022-59349041 | MS.gene44889:intron | 10.0% |
| !! | TATAAATAATATCCACTATA+AGG | + | chr5.2:59348298-59348317 | None:intergenic | 15.0% |
| !!! | AAAATATAGTTTAGAATTAC+AGG | + | chr5.2:59347215-59347234 | None:intergenic | 15.0% |
| !!! | ACCAAAATGTTTTAAAAATA+GGG | + | chr5.2:59348518-59348537 | None:intergenic | 15.0% |
| !! | AAAAATAATATTCCTGGAAA+GGG | - | chr5.2:59349379-59349398 | MS.gene44889:intron | 20.0% |
| !! | ATTGAAAAGTTCTTCTTTAT+AGG | + | chr5.2:59348847-59348866 | None:intergenic | 20.0% |
| !! | TACTTACAAAAGATACATTA+GGG | + | chr5.2:59347284-59347303 | None:intergenic | 20.0% |
| !! | TGAACAAATTACATGAATAA+TGG | + | chr5.2:59348642-59348661 | None:intergenic | 20.0% |
| !! | TGATAATTCAAAATACTTTG+TGG | + | chr5.2:59347740-59347759 | None:intergenic | 20.0% |
| !! | TGTCTAAATTATCTAACATT+TGG | + | chr5.2:59348260-59348279 | None:intergenic | 20.0% |
| !! | TTACTTACAAAAGATACATT+AGG | + | chr5.2:59347285-59347304 | None:intergenic | 20.0% |
| !!! | AATAGGAATATTTTCACAAT+AGG | + | chr5.2:59349493-59349512 | None:intergenic | 20.0% |
| !!! | ACCCTATTTTTAAAACATTT+TGG | - | chr5.2:59348514-59348533 | MS.gene44889:intron | 20.0% |
| !!! | ACTACTTTTACTTTAATGTA+TGG | + | chr5.2:59348936-59348955 | None:intergenic | 20.0% |
| !!! | ATCTTTTGTAAGTAATTGTA+TGG | - | chr5.2:59347290-59347309 | MS.gene44889:CDS | 20.0% |
| !!! | ATTGATTGATAGTATCTTTA+TGG | - | chr5.2:59346981-59347000 | MS.gene44889:CDS | 20.0% |
| !!! | CACCAAAATGTTTTAAAAAT+AGG | + | chr5.2:59348519-59348538 | None:intergenic | 20.0% |
| !!! | TATGTTATAAAATTTGCTGT+TGG | - | chr5.2:59350076-59350095 | MS.gene44889:CDS | 20.0% |
| !!! | TGTTGATAAATATAAGAAGA+TGG | - | chr5.2:59347575-59347594 | MS.gene44889:intron | 20.0% |
| !!! | TTTAAGGTAAATGATAACTA+GGG | - | chr5.2:59348319-59348338 | MS.gene44889:intron | 20.0% |
| !!! | TTTGATTATCTGTTTTTTTC+AGG | - | chr5.2:59347456-59347475 | MS.gene44889:CDS | 20.0% |
| !!! | TTTTAAAAATAGGGTCAATT+TGG | + | chr5.2:59348509-59348528 | None:intergenic | 20.0% |
| !!! | TTTTAAGGTAAATGATAACT+AGG | - | chr5.2:59348318-59348337 | MS.gene44889:intron | 20.0% |
| !!! | TTTTGAGTTTATAATTGTAG+TGG | - | chr5.2:59349844-59349863 | MS.gene44889:intron | 20.0% |
| ! | AAAATAATATTCCTGGAAAG+GGG | - | chr5.2:59349380-59349399 | MS.gene44889:intron | 25.0% |
| ! | AAGAAATGAATATATTCCAG+AGG | - | chr5.2:59349194-59349213 | MS.gene44889:intron | 25.0% |
| ! | ACACATACACATATAATTCT+TGG | - | chr5.2:59348135-59348154 | MS.gene44889:intron | 25.0% |
| ! | ACATCATTCAATAGTCAATT+CGG | + | chr5.2:59347348-59347367 | None:intergenic | 25.0% |
| ! | ACGAAGAAATTCATTAAAAC+AGG | + | chr5.2:59348115-59348134 | None:intergenic | 25.0% |
| ! | ACGTAGAAAAATAATATTCC+TGG | - | chr5.2:59349373-59349392 | MS.gene44889:intron | 25.0% |
| ! | ACTATATATGACTTAAGAAC+TGG | + | chr5.2:59349110-59349129 | None:intergenic | 25.0% |
| ! | AGAACTGAAAACATACAATA+AGG | + | chr5.2:59350147-59350166 | None:intergenic | 25.0% |
| ! | ATTAATCTTGTAAGAGACAA+AGG | - | chr5.2:59347107-59347126 | MS.gene44889:CDS | 25.0% |
| ! | ATTAGGTGAAATAACTGTAT+AGG | + | chr5.2:59348164-59348183 | None:intergenic | 25.0% |
| ! | CATTTCTTTCAAGATGAATT+TGG | + | chr5.2:59349182-59349201 | None:intergenic | 25.0% |
| ! | GAAAAATAATATTCCTGGAA+AGG | - | chr5.2:59349378-59349397 | MS.gene44889:intron | 25.0% |
| ! | GCATTATATGAAAAGCTATT+AGG | + | chr5.2:59348181-59348200 | None:intergenic | 25.0% |
| ! | GGATTGATAAAATGACAATT+AGG | - | chr5.2:59349043-59349062 | MS.gene44889:intron | 25.0% |
| ! | GTAGTTATATAACCTTATAG+TGG | - | chr5.2:59348283-59348302 | MS.gene44889:intron | 25.0% |
| ! | GTGATATTACTTTCATGATT+AGG | - | chr5.2:59348230-59348249 | MS.gene44889:intron | 25.0% |
| ! | TCAAGTAATAAGAACTTAGA+AGG | + | chr5.2:59349885-59349904 | None:intergenic | 25.0% |
| ! | TGATAAATATAAGAAGATGG+AGG | - | chr5.2:59347578-59347597 | MS.gene44889:intron | 25.0% |
| !!! | ATATATTTTTGCCAAATCAG+TGG | + | chr5.2:59348893-59348912 | None:intergenic | 25.0% |
| !!! | TTGTAGTTTTGATACATTCA+AGG | - | chr5.2:59347382-59347401 | MS.gene44889:CDS | 25.0% |
| !!! | TTTGAAGATGACAAGTTTTT+TGG | - | chr5.2:59347049-59347068 | MS.gene44889:CDS | 25.0% |
| AAAACATACAATAAGGTAGC+AGG | + | chr5.2:59350140-59350159 | None:intergenic | 30.0% | |
| AAGGAATGGTTATGATGATA+GGG | - | chr5.2:59350546-59350565 | MS.gene44889:CDS | 30.0% | |
| ACAACATGACACACATTTAA+GGG | - | chr5.2:59347414-59347433 | MS.gene44889:CDS | 30.0% | |
| ACATGATTCTACAGTCAAAT+TGG | + | chr5.2:59348212-59348231 | None:intergenic | 30.0% | |
| ACTTCTCTGAATATGTTCTT+AGG | - | chr5.2:59349684-59349703 | MS.gene44889:intron | 30.0% | |
| ATCTTGAAAGAATGAAACCT+AGG | - | chr5.2:59349132-59349151 | MS.gene44889:intron | 30.0% | |
| CTGAATTGCTTTGTAATGTT+TGG | - | chr5.2:59347488-59347507 | MS.gene44889:CDS | 30.0% | |
| CTTCTCTGAATATGTTCTTA+GGG | - | chr5.2:59349685-59349704 | MS.gene44889:intron | 30.0% | |
| TAAATATAAGAAGATGGAGG+AGG | - | chr5.2:59347581-59347600 | MS.gene44889:intron | 30.0% | |
| TATGCTGGTAATACATGAAT+TGG | + | chr5.2:59349309-59349328 | None:intergenic | 30.0% | |
| TGAAAGTTTGTATTGAGAAG+TGG | - | chr5.2:59348808-59348827 | MS.gene44889:intron | 30.0% | |
| TTCGTTGTGAGTTATAACTT+GGG | + | chr5.2:59349798-59349817 | None:intergenic | 30.0% | |
| TTCTATCATTTCTCTTGGAT+GGG | + | chr5.2:59350369-59350388 | None:intergenic | 30.0% | |
| TTCTTTGATCTTCATATGCT+AGG | + | chr5.2:59347160-59347179 | None:intergenic | 30.0% | |
| TTGATTATGTATGTTATCGC+TGG | - | chr5.2:59347234-59347253 | MS.gene44889:CDS | 30.0% | |
| TTTCGTTGTGAGTTATAACT+TGG | + | chr5.2:59349799-59349818 | None:intergenic | 30.0% | |
| ! | AGAGGAAGAATTTTATGTGA+AGG | - | chr5.2:59349445-59349464 | MS.gene44889:intron | 30.0% |
| ! | AGGAAGAATTTTATGTGAAG+GGG | - | chr5.2:59349447-59349466 | MS.gene44889:intron | 30.0% |
| ! | CACATAAAGTTTTACATCGA+CGG | + | chr5.2:59346959-59346978 | None:intergenic | 30.0% |
| ! | CTAATTCCATCTCATTTTCA+CGG | + | chr5.2:59350342-59350361 | None:intergenic | 30.0% |
| ! | GAGGAAGAATTTTATGTGAA+GGG | - | chr5.2:59349446-59349465 | MS.gene44889:intron | 30.0% |
| ! | GTTGTACACAAGTTTTTCTT+AGG | - | chr5.2:59347920-59347939 | MS.gene44889:intron | 30.0% |
| ! | TAATTCCATCTCATTTTCAC+GGG | + | chr5.2:59350341-59350360 | None:intergenic | 30.0% |
| AAACTCCTAAACAAAGCCTA+AGG | - | chr5.2:59349632-59349651 | MS.gene44889:intron | 35.0% | |
| AACAATTGCCAAGAGAAGAT+CGG | - | chr5.2:59350500-59350519 | MS.gene44889:intron | 35.0% | |
| AACTCCTAAACAAAGCCTAA+GGG | - | chr5.2:59349633-59349652 | MS.gene44889:intron | 35.0% | |
| AAGATAAAAGACCAAGTAGG+CGG | - | chr5.2:59350665-59350684 | MS.gene44889:intron | 35.0% | |
| AGATGGCGATAGTAAATTTG+TGG | - | chr5.2:59350414-59350433 | MS.gene44889:intron | 35.0% | |
| CAAGAGAAATGATAGAAGAG+AGG | - | chr5.2:59350372-59350391 | MS.gene44889:intron | 35.0% | |
| CAAGGAATGGTTATGATGAT+AGG | - | chr5.2:59350545-59350564 | MS.gene44889:CDS | 35.0% | |
| CCATACCTTCTTTCTTTACT+GGG | + | chr5.2:59350262-59350281 | None:intergenic | 35.0% | |
| CCTCAATCAAATAAGCCAAA+AGG | + | chr5.2:59347866-59347885 | None:intergenic | 35.0% | |
| CTCTCTTCTATCATTTCTCT+TGG | + | chr5.2:59350374-59350393 | None:intergenic | 35.0% | |
| CTTCTATCATTTCTCTTGGA+TGG | + | chr5.2:59350370-59350389 | None:intergenic | 35.0% | |
| GAAGAAATGAGATCAAGGAA+TGG | - | chr5.2:59350532-59350551 | MS.gene44889:CDS | 35.0% | |
| GAATATGTTCTTAGGGAGTT+AGG | - | chr5.2:59349692-59349711 | MS.gene44889:intron | 35.0% | |
| GACAACATGACACACATTTA+AGG | - | chr5.2:59347413-59347432 | MS.gene44889:CDS | 35.0% | |
| GAGAAGATAAAAGACCAAGT+AGG | - | chr5.2:59350662-59350681 | MS.gene44889:intron | 35.0% | |
| GAGTTTACAAGGGTCTATTT+AGG | + | chr5.2:59349264-59349283 | None:intergenic | 35.0% | |
| GATGGCGATAGTAAATTTGT+GGG | - | chr5.2:59350415-59350434 | MS.gene44889:intron | 35.0% | |
| GGAAGCAAGTTACTGTATTT+AGG | + | chr5.2:59349229-59349248 | None:intergenic | 35.0% | |
| GGGGATAATGACAAATATGA+TGG | - | chr5.2:59350235-59350254 | MS.gene44889:intron | 35.0% | |
| GTCAGAATCATTTCTTCCTT+TGG | + | chr5.2:59350923-59350942 | None:intergenic | 35.0% | |
| TAGACCATAGTAGTCAATAG+CGG | - | chr5.2:59348344-59348363 | MS.gene44889:intron | 35.0% | |
| TATAGCGCTATGACAAATAG+TGG | + | chr5.2:59348687-59348706 | None:intergenic | 35.0% | |
| TGAGCCAAGAGATCATAAAA+GGG | - | chr5.2:59350573-59350592 | MS.gene44889:CDS | 35.0% | |
| TGATCAGAATCTCTTGACTT+AGG | + | chr5.2:59350640-59350659 | None:intergenic | 35.0% | |
| TGTGTCACAGATAATCTGAA+TGG | - | chr5.2:59347516-59347535 | MS.gene44889:intron | 35.0% | |
| TTTGACAAGTATGCTAAGAC+TGG | - | chr5.2:59349079-59349098 | MS.gene44889:intron | 35.0% | |
| ! | ACTCAGTTTTGCTTTGCTTA+TGG | - | chr5.2:59350034-59350053 | MS.gene44889:CDS | 35.0% |
| ! | AGGTTTCAGGTAGGATTATT+AGG | - | chr5.2:59347544-59347563 | MS.gene44889:intron | 35.0% |
| ! | ATTTAGGTCATGTTTTCCTC+TGG | + | chr5.2:59349213-59349232 | None:intergenic | 35.0% |
| ! | GAATCTCTATCTCTAGTTTC+TGG | + | chr5.2:59350307-59350326 | None:intergenic | 35.0% |
| ! | GCTTTGTGATTTTCCGTATT+GGG | - | chr5.2:59349526-59349545 | MS.gene44889:intron | 35.0% |
| ! | GGTTTCAGGTAGGATTATTA+GGG | - | chr5.2:59347545-59347564 | MS.gene44889:intron | 35.0% |
| ! | TCAGAAAGTTGGTTAACAAG+AGG | - | chr5.2:59349427-59349446 | MS.gene44889:intron | 35.0% |
| ! | TCATCATCTTGATAGTCTCT+TGG | + | chr5.2:59350475-59350494 | None:intergenic | 35.0% |
| ! | TCTCTTTTCTTCTCTTCTAC+TGG | + | chr5.2:59350452-59350471 | None:intergenic | 35.0% |
| ! | TCTTCCCTTTTATGATCTCT+TGG | + | chr5.2:59350580-59350599 | None:intergenic | 35.0% |
| ! | TGCTTTGTGATTTTCCGTAT+TGG | - | chr5.2:59349525-59349544 | MS.gene44889:intron | 35.0% |
| ! | TGTTCATATGCAATGCCTTT+TGG | - | chr5.2:59347848-59347867 | MS.gene44889:intron | 35.0% |
| ! | TTTCTTGATTGCCACTGATT+TGG | - | chr5.2:59348879-59348898 | MS.gene44889:intron | 35.0% |
| !! | AAAGGTACTGGAAAATCGAA+GGG | - | chr5.2:59347125-59347144 | MS.gene44889:CDS | 35.0% |
| !! | ATTGAGGCGTTTTTGTTTGA+TGG | - | chr5.2:59347879-59347898 | MS.gene44889:intron | 35.0% |
| !! | GCTTTGTTTAGGAGTTTCTA+GGG | + | chr5.2:59349629-59349648 | None:intergenic | 35.0% |
| !! | TTGAGGCGTTTTTGTTTGAT+GGG | - | chr5.2:59347880-59347899 | MS.gene44889:intron | 35.0% |
| !!! | CCTTTTGGCTTATTTGATTG+AGG | - | chr5.2:59347863-59347882 | MS.gene44889:intron | 35.0% |
| !!! | GATGACAAGTTTTTTGGTGT+TGG | - | chr5.2:59347055-59347074 | MS.gene44889:CDS | 35.0% |
| !!! | GATTTTGGGACAAATGTTTC+AGG | - | chr5.2:59349334-59349353 | MS.gene44889:intron | 35.0% |
| AAAGGGGTGAATAGGGTTAT+GGG | - | chr5.2:59349396-59349415 | MS.gene44889:intron | 40.0% | |
| AAGAATGAAACCTAGGCAAG+CGG | - | chr5.2:59349139-59349158 | MS.gene44889:intron | 40.0% | |
| AAGAGGAAGCAAAGCAGAAA+AGG | - | chr5.2:59347610-59347629 | MS.gene44889:intron | 40.0% | |
| AAGATAAAAGGCCAAGTAGG+CGG | - | chr5.2:59350734-59350753 | MS.gene44889:intron | 40.0% | |
| AAGGGTCTATTTAGGTCAGT+CGG | + | chr5.2:59349256-59349275 | None:intergenic | 40.0% | |
| ACTGATCGATCTGAATCCAA+AGG | - | chr5.2:59350904-59350923 | MS.gene44889:CDS | 40.0% | |
| AGAGGAAGCAAAGCAGAAAA+GGG | - | chr5.2:59347611-59347630 | MS.gene44889:intron | 40.0% | |
| AGATAAAAGACCAAGTAGGC+GGG | - | chr5.2:59350666-59350685 | MS.gene44889:intron | 40.0% | |
| AGATAATCTGAATGGAGCTC+AGG | - | chr5.2:59347524-59347543 | MS.gene44889:intron | 40.0% | |
| AGCAAGTCAAGAGAAACACA+CGG | - | chr5.2:59350775-59350794 | MS.gene44889:intron | 40.0% | |
| ATCATAAAAGGGAAGACAGG+AGG | - | chr5.2:59350584-59350603 | MS.gene44889:CDS | 40.0% | |
| ATCCTACTCGTGAGTTTACA+AGG | + | chr5.2:59349275-59349294 | None:intergenic | 40.0% | |
| ATGGTCCCAGTAAAGAAAGA+AGG | - | chr5.2:59350254-59350273 | MS.gene44889:intron | 40.0% | |
| CCCAGTAAAGAAAGAAGGTA+TGG | - | chr5.2:59350259-59350278 | MS.gene44889:intron | 40.0% | |
| CGAACATGCTGAGTTAGATT+TGG | - | chr5.2:59349735-59349754 | MS.gene44889:intron | 40.0% | |
| CTATCCGAGATTGAGTACTA+TGG | - | chr5.2:59348750-59348769 | MS.gene44889:intron | 40.0% | |
| CTATTTAGGTCAGTCGGTAA+GGG | + | chr5.2:59349250-59349269 | None:intergenic | 40.0% | |
| CTGACCAAAGAGAAGAAAAG+AGG | - | chr5.2:59350938-59350957 | MS.gene44889:CDS | 40.0% | |
| CTGAGCCAAGAGATCATAAA+AGG | - | chr5.2:59350572-59350591 | MS.gene44889:CDS | 40.0% | |
| CTGATAGCTATCACCCAATA+CGG | + | chr5.2:59349542-59349561 | None:intergenic | 40.0% | |
| GAGATCATAAAAGGGAAGAC+AGG | - | chr5.2:59350581-59350600 | MS.gene44889:CDS | 40.0% | |
| GCCATACCTTCTTTCTTTAC+TGG | + | chr5.2:59350263-59350282 | None:intergenic | 40.0% | |
| GGAGAGAAGAAATGAGATCA+AGG | - | chr5.2:59350527-59350546 | MS.gene44889:CDS | 40.0% | |
| GGTCAAGAGAAGATCATGAT+AGG | - | chr5.2:59350851-59350870 | MS.gene44889:CDS | 40.0% | |
| TAGGCCATAGTACTCAATCT+CGG | + | chr5.2:59348757-59348776 | None:intergenic | 40.0% | |
| TAGTACTCAATCTCGGATAG+CGG | + | chr5.2:59348750-59348769 | None:intergenic | 40.0% | |
| TCATGATCTTCTCTTGACCT+CGG | + | chr5.2:59350850-59350869 | None:intergenic | 40.0% | |
| TCCTACTCGTGAGTTTACAA+GGG | + | chr5.2:59349274-59349293 | None:intergenic | 40.0% | |
| TCTATTTAGGTCAGTCGGTA+AGG | + | chr5.2:59349251-59349270 | None:intergenic | 40.0% | |
| TTCAGGTAGGATTATTAGGG+TGG | - | chr5.2:59347548-59347567 | MS.gene44889:intron | 40.0% | |
| TTGTAGAGAGCTGCAAATAC+TGG | - | chr5.2:59350187-59350206 | MS.gene44889:intron | 40.0% | |
| ! | AAGCAGCAGCTTTTCACAAT+AGG | + | chr5.2:59349510-59349529 | None:intergenic | 40.0% |
| ! | AATACTGGTTGGGGTGATAA+CGG | - | chr5.2:59350202-59350221 | MS.gene44889:intron | 40.0% |
| ! | ACCAGCATAGCTGTGATTTT+GGG | - | chr5.2:59349320-59349339 | MS.gene44889:intron | 40.0% |
| ! | CTTGTAAGAGACAAAGGTAC+TGG | - | chr5.2:59347113-59347132 | MS.gene44889:CDS | 40.0% |
| ! | CTTTTATGATCTCTTGGCTC+AGG | + | chr5.2:59350574-59350593 | None:intergenic | 40.0% |
| ! | GATTCCGCTTATGTTTTCGT+CGG | - | chr5.2:59346834-59346853 | MS.gene44889:CDS | 40.0% |
| ! | GCTATTGACTACTATGGTCT+AGG | + | chr5.2:59348345-59348364 | None:intergenic | 40.0% |
| ! | TACCAGCATAGCTGTGATTT+TGG | - | chr5.2:59349319-59349338 | MS.gene44889:intron | 40.0% |
| ! | TGGACCTCTTTTCTTCTCTT+TGG | + | chr5.2:59350945-59350964 | None:intergenic | 40.0% |
| ! | TTTGGAGGGTGAGAAGTATA+AGG | + | chr5.2:59349595-59349614 | None:intergenic | 40.0% |
| !! | AGAAGCACTAATCTTGCTGT+TGG | - | chr5.2:59347176-59347195 | MS.gene44889:CDS | 40.0% |
| !! | CAAAGGTACTGGAAAATCGA+AGG | - | chr5.2:59347124-59347143 | MS.gene44889:CDS | 40.0% |
| !! | CTAGTTTCTGGAATACGATC+TGG | + | chr5.2:59350295-59350314 | None:intergenic | 40.0% |
| !! | CTCAGACATTTGTTTCTGCT+TGG | - | chr5.2:59348050-59348069 | MS.gene44889:intron | 40.0% |
| !! | GACATTTGTTTCTGCTTGGT+AGG | - | chr5.2:59348054-59348073 | MS.gene44889:intron | 40.0% |
| !! | GGAAGCTTGTTGTTTGTAGT+AGG | - | chr5.2:59349756-59349775 | MS.gene44889:intron | 40.0% |
| !! | GGCTTTGTTTAGGAGTTTCT+AGG | + | chr5.2:59349630-59349649 | None:intergenic | 40.0% |
| !! | GTGATAACGGGATTGCAAAA+GGG | - | chr5.2:59350215-59350234 | MS.gene44889:intron | 40.0% |
| !! | TGATAACGGGATTGCAAAAG+GGG | - | chr5.2:59350216-59350235 | MS.gene44889:intron | 40.0% |
| !! | TGTTGGTGATATCCAGGTAT+GGG | - | chr5.2:59347072-59347091 | MS.gene44889:CDS | 40.0% |
| !!! | TTTTGGTGTTGGTGATATCC+AGG | - | chr5.2:59347066-59347085 | MS.gene44889:CDS | 40.0% |
| AAGAATTACACAGCAGCAGC+AGG | + | chr5.2:59349934-59349953 | None:intergenic | 45.0% | |
| AAGAGAAACACACGGTAGCA+GGG | - | chr5.2:59350783-59350802 | MS.gene44889:intron | 45.0% | |
| AAGATGTTGCGAAGGCAAGA+TGG | - | chr5.2:59350397-59350416 | MS.gene44889:intron | 45.0% | |
| AAGGGGTGAATAGGGTTATG+GGG | - | chr5.2:59349397-59349416 | MS.gene44889:intron | 45.0% | |
| ACATAAGCGAAGACGCTTCA+TGG | - | chr5.2:59346796-59346815 | MS.gene44889:CDS | 45.0% | |
| ACCACCGACGAAAACATAAG+CGG | + | chr5.2:59346841-59346860 | None:intergenic | 45.0% | |
| ACCCTTGTAAACTCACGAGT+AGG | - | chr5.2:59349270-59349289 | MS.gene44889:intron | 45.0% | |
| AGAAAGCAAGCCAGTCATCA+AGG | + | chr5.2:59348032-59348051 | None:intergenic | 45.0% | |
| AGAATGAAACCTAGGCAAGC+GGG | - | chr5.2:59349140-59349159 | MS.gene44889:intron | 45.0% | |
| AGAATTACACAGCAGCAGCA+GGG | + | chr5.2:59349933-59349952 | None:intergenic | 45.0% | |
| AGAGAGCTGCAAATACTGGT+TGG | - | chr5.2:59350191-59350210 | MS.gene44889:intron | 45.0% | |
| AGATAAAAGGCCAAGTAGGC+GGG | - | chr5.2:59350735-59350754 | MS.gene44889:intron | 45.0% | |
| AGGTAGCAGGACAAATGATC+TGG | + | chr5.2:59350127-59350146 | None:intergenic | 45.0% | |
| ATTCCCTTCGATTTCACCGA+GGG | - | chr5.2:59346861-59346880 | MS.gene44889:CDS | 45.0% | |
| ATTCCTGGAAAGGGGTGAAT+AGG | - | chr5.2:59349388-59349407 | MS.gene44889:intron | 45.0% | |
| CAGATCCTCTACTAGTGTCT+AGG | + | chr5.2:59348776-59348795 | None:intergenic | 45.0% | |
| CGCTATGACGATTAGCGTAA+CGG | + | chr5.2:59348395-59348414 | None:intergenic | 45.0% | |
| CGTTACGCTAATCGTCATAG+CGG | - | chr5.2:59348393-59348412 | MS.gene44889:intron | 45.0% | |
| CTAAACAAAGCCTAAGGGCA+GGG | - | chr5.2:59349638-59349657 | MS.gene44889:intron | 45.0% | |
| CTAGACACTAGTAGAGGATC+TGG | - | chr5.2:59348774-59348793 | MS.gene44889:intron | 45.0% | |
| CTGGCAACTAAGCAGAAGAA+GGG | + | chr5.2:59350108-59350127 | None:intergenic | 45.0% | |
| GAAAGGGGTGAATAGGGTTA+TGG | - | chr5.2:59349395-59349414 | MS.gene44889:intron | 45.0% | |
| GAGAAGAAAAGAGGTCCAGA+AGG | - | chr5.2:59350947-59350966 | MS.gene44889:CDS | 45.0% | |
| GAGAGGAAAAGATGTTGCGA+AGG | - | chr5.2:59350389-59350408 | MS.gene44889:intron | 45.0% | |
| GCTAACAGAAGACACATTCG+AGG | - | chr5.2:59347321-59347340 | MS.gene44889:CDS | 45.0% | |
| TATGGCCTAGACACTAGTAG+AGG | - | chr5.2:59348768-59348787 | MS.gene44889:intron | 45.0% | |
| TATTCCCTTCGATTTCACCG+AGG | - | chr5.2:59346860-59346879 | MS.gene44889:CDS | 45.0% | |
| TCCCAAAATCACAGCTATGC+TGG | + | chr5.2:59349324-59349343 | None:intergenic | 45.0% | |
| TCTGGCAACTAAGCAGAAGA+AGG | + | chr5.2:59350109-59350128 | None:intergenic | 45.0% | |
| TTCCTGGAAAGGGGTGAATA+GGG | - | chr5.2:59349389-59349408 | MS.gene44889:intron | 45.0% | |
| TTTGTCGGGCTTTCCAAAGA+GGG | - | chr5.2:59347646-59347665 | MS.gene44889:intron | 45.0% | |
| ! | AGAGCTGCAAATACTGGTTG+GGG | - | chr5.2:59350193-59350212 | MS.gene44889:intron | 45.0% |
| ! | ATACTGGTTGGGGTGATAAC+GGG | - | chr5.2:59350203-59350222 | MS.gene44889:intron | 45.0% |
| ! | GAGAGCTGCAAATACTGGTT+GGG | - | chr5.2:59350192-59350211 | MS.gene44889:intron | 45.0% |
| ! | TTTTTATTCCCCGCTTGCCT+AGG | + | chr5.2:59349152-59349171 | None:intergenic | 45.0% |
| !! | GGTGATAACGGGATTGCAAA+AGG | - | chr5.2:59350214-59350233 | MS.gene44889:intron | 45.0% |
| !! | GTGTTGGTGATATCCAGGTA+TGG | - | chr5.2:59347071-59347090 | MS.gene44889:CDS | 45.0% |
| !! | GTTGGTGATATCCAGGTATG+GGG | - | chr5.2:59347073-59347092 | MS.gene44889:CDS | 45.0% |
| !! | GTTTAGGAGTTTCTAGGGCA+GGG | + | chr5.2:59349624-59349643 | None:intergenic | 45.0% |
| !! | TGTTTAGGAGTTTCTAGGGC+AGG | + | chr5.2:59349625-59349644 | None:intergenic | 45.0% |
| !! | TTTAGGAGTTTCTAGGGCAG+GGG | + | chr5.2:59349623-59349642 | None:intergenic | 45.0% |
| !!! | AGGCGGGATGTTGATGATTT+TGG | - | chr5.2:59350682-59350701 | MS.gene44889:intron | 45.0% |
| !! | ATAAAAAAAAAAAAAAAAAC+TGG | + | chr5.2:59349975-59349994 | None:intergenic | 5.0% |
| !! | TAAAAAAAAAAAAAAAAACT+GGG | + | chr5.2:59349974-59349993 | None:intergenic | 5.0% |
| !! | TTCATATAAATAAAAAAAAA+AGG | + | chr5.2:59348978-59348997 | None:intergenic | 5.0% |
| AACAGCGATCACATCACCCT+CGG | + | chr5.2:59346880-59346899 | None:intergenic | 50.0% | |
| AACCCTATTCACCCCTTTCC+AGG | + | chr5.2:59349394-59349413 | None:intergenic | 50.0% | |
| AAGCCAGTCATCAAGGCTGT+AGG | + | chr5.2:59348025-59348044 | None:intergenic | 50.0% | |
| ATCAACAACCTCCCCATACC+TGG | + | chr5.2:59347087-59347106 | None:intergenic | 50.0% | |
| ATCACCCTCGGTGAAATCGA+AGG | + | chr5.2:59346868-59346887 | None:intergenic | 50.0% | |
| ATGCGCTTCACCAGTGTTAG+CGG | + | chr5.2:59346744-59346763 | None:intergenic | 50.0% | |
| CAAGAGAAACACACGGTAGC+AGG | - | chr5.2:59350782-59350801 | MS.gene44889:intron | 50.0% | |
| CAGAGCCCGTGAAAATGAGA+TGG | - | chr5.2:59350333-59350352 | MS.gene44889:intron | 50.0% | |
| CATTATTGTGCCCTGCCCTT+AGG | + | chr5.2:59349651-59349670 | None:intergenic | 50.0% | |
| CCTAAACAAAGCCTAAGGGC+AGG | - | chr5.2:59349637-59349656 | MS.gene44889:intron | 50.0% | |
| CTCCTTTGCCGATCTTCTCT+TGG | + | chr5.2:59350511-59350530 | None:intergenic | 50.0% | |
| CTGAATGGAGCTCAGGTTTC+AGG | - | chr5.2:59347531-59347550 | MS.gene44889:intron | 50.0% | |
| CTGACGATGAATCTATGCCG+AGG | - | chr5.2:59350830-59350849 | MS.gene44889:CDS | 50.0% | |
| GAATGAAACCTAGGCAAGCG+GGG | - | chr5.2:59349141-59349160 | MS.gene44889:intron | 50.0% | |
| GATGGAGGAGGAAGATGAAG+AGG | - | chr5.2:59347593-59347612 | MS.gene44889:intron | 50.0% | |
| GGAAGCAAAGCAGAAAAGGG+AGG | - | chr5.2:59347614-59347633 | MS.gene44889:intron | 50.0% | |
| GGGGTGCGATATCAGAAAGT+TGG | - | chr5.2:59349416-59349435 | MS.gene44889:intron | 50.0% | |
| GGTCACTTCAGCTGCTATAG+CGG | - | chr5.2:59348432-59348451 | MS.gene44889:intron | 50.0% | |
| GTTTGTCGGGCTTTCCAAAG+AGG | - | chr5.2:59347645-59347664 | MS.gene44889:intron | 50.0% | |
| TCACCCTCGGTGAAATCGAA+GGG | + | chr5.2:59346867-59346886 | None:intergenic | 50.0% | |
| TCATCAACATCCCGCCTACT+TGG | + | chr5.2:59350679-59350698 | None:intergenic | 50.0% | |
| TGCCAAGAGAAGATCGGCAA+AGG | - | chr5.2:59350506-59350525 | MS.gene44889:intron | 50.0% | |
| TTGTCGGGCTTTCCAAAGAG+GGG | - | chr5.2:59347647-59347666 | MS.gene44889:intron | 50.0% | |
| ! | ATGGAGCTCAGGTTTCAGGT+AGG | - | chr5.2:59347535-59347554 | MS.gene44889:intron | 50.0% |
| ! | CATCTCATTTTCACGGGCTC+TGG | + | chr5.2:59350335-59350354 | None:intergenic | 50.0% |
| ! | TCCGCTTATGTTTTCGTCGG+TGG | - | chr5.2:59346837-59346856 | MS.gene44889:CDS | 50.0% |
| !! | CCTGCCCTTAGGCTTTGTTT+AGG | + | chr5.2:59349640-59349659 | None:intergenic | 50.0% |
| AGCGGTGCGGAATGAGATAG+AGG | - | chr5.2:59348411-59348430 | MS.gene44889:intron | 55.0% | |
| CACGAGTACACTCCCCTCTT+TGG | + | chr5.2:59347662-59347681 | None:intergenic | 55.0% | |
| CCGACTACAAGGTGGGATAG+CGG | + | chr5.2:59348717-59348736 | None:intergenic | 55.0% | |
| CCGCTATCCCACCTTGTAGT+CGG | - | chr5.2:59348714-59348733 | MS.gene44889:intron | 55.0% | |
| CGACTACAAGGTGGGATAGC+GGG | + | chr5.2:59348716-59348735 | None:intergenic | 55.0% | |
| CGCTAATCGTCATAGCGGTG+CGG | - | chr5.2:59348398-59348417 | MS.gene44889:intron | 55.0% | |
| GAAAGCCCGACAAACACCAC+GGG | + | chr5.2:59347640-59347659 | None:intergenic | 55.0% | |
| GGAAAGCCCGACAAACACCA+CGG | + | chr5.2:59347641-59347660 | None:intergenic | 55.0% | |
| GGTGATATCCAGGTATGGGG+AGG | - | chr5.2:59347076-59347095 | MS.gene44889:CDS | 55.0% | |
| GTAGCAGCCGACTACAAGGT+GGG | + | chr5.2:59348724-59348743 | None:intergenic | 55.0% | |
| TGCGCTTCACCAGTGTTAGC+GGG | + | chr5.2:59346743-59346762 | None:intergenic | 55.0% | |
| ! | ACGCCTACAGCCTTGATGAC+TGG | - | chr5.2:59348019-59348038 | MS.gene44889:intron | 55.0% |
| ! | CAAAGAGGGGAGTGTACTCG+TGG | - | chr5.2:59347660-59347679 | MS.gene44889:intron | 55.0% |
| ! | GCGGCCGCTATTGACTACTA+TGG | + | chr5.2:59348351-59348370 | None:intergenic | 55.0% |
| !! | TATAGCGGCGTAGCGGATAG+CGG | - | chr5.2:59348447-59348466 | MS.gene44889:intron | 55.0% |
| !! | TGCTTGGTAGGCTTGCTGTC+AGG | - | chr5.2:59348066-59348085 | MS.gene44889:intron | 55.0% |
| AAGCAGAAAAGGGAGGCCCG+TGG | - | chr5.2:59347621-59347640 | MS.gene44889:intron | 60.0% | |
| CACACGGTAGCAGGGAAGAG+AGG | - | chr5.2:59350791-59350810 | MS.gene44889:intron | 60.0% | |
| CAGCTGCTATAGCGGCGTAG+CGG | - | chr5.2:59348440-59348459 | MS.gene44889:intron | 60.0% | |
| CGTAGCAGCCGACTACAAGG+TGG | + | chr5.2:59348725-59348744 | None:intergenic | 60.0% | |
| GTGCGTAGCAGCCGACTACA+AGG | + | chr5.2:59348728-59348747 | None:intergenic | 60.0% | |
| !! | AGGAGTTTCTAGGGCAGGGG+AGG | + | chr5.2:59349620-59349639 | None:intergenic | 60.0% |
| !! | GGAGTTTCTAGGGCAGGGGA+GGG | + | chr5.2:59349619-59349638 | None:intergenic | 60.0% |
| AATAGCGGCCGCACGTAGCG+TGG | - | chr5.2:59348359-59348378 | MS.gene44889:intron | 65.0% | |
| GGAGGCCCGTGGTGTTTGTC+GGG | - | chr5.2:59347632-59347651 | MS.gene44889:intron | 65.0% | |
| GGGAGGCCCGTGGTGTTTGT+CGG | - | chr5.2:59347631-59347650 | MS.gene44889:intron | 65.0% | |
| ! | GGGGAGTGTACTCGTGGAGC+TGG | - | chr5.2:59347666-59347685 | MS.gene44889:intron | 65.0% |
| ! | TCTAGGGCAGGGGAGGGCTT+TGG | + | chr5.2:59349613-59349632 | None:intergenic | 65.0% |
| CGTCGCAGCCACGCTACGTG+CGG | + | chr5.2:59348370-59348389 | None:intergenic | 70.0% | |
| ! | AGGGCAGGGGAGGGCTTTGG+AGG | + | chr5.2:59349610-59349629 | None:intergenic | 70.0% |
| !! | GGGCAGGGGAGGGCTTTGGA+GGG | + | chr5.2:59349609-59349628 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 59346735 | 59350972 | 59346735 | ID=MS.gene44889 |
| chr5.2 | mRNA | 59346735 | 59350972 | 59346735 | ID=MS.gene44889.t1;Parent=MS.gene44889 |
| chr5.2 | exon | 59350800 | 59350972 | 59350800 | ID=MS.gene44889.t1.exon1;Parent=MS.gene44889.t1 |
| chr5.2 | CDS | 59350800 | 59350972 | 59350800 | ID=cds.MS.gene44889.t1;Parent=MS.gene44889.t1 |
| chr5.2 | exon | 59350510 | 59350619 | 59350510 | ID=MS.gene44889.t1.exon2;Parent=MS.gene44889.t1 |
| chr5.2 | CDS | 59350510 | 59350619 | 59350510 | ID=cds.MS.gene44889.t1;Parent=MS.gene44889.t1 |
| chr5.2 | exon | 59349994 | 59350181 | 59349994 | ID=MS.gene44889.t1.exon3;Parent=MS.gene44889.t1 |
| chr5.2 | CDS | 59349994 | 59350181 | 59349994 | ID=cds.MS.gene44889.t1;Parent=MS.gene44889.t1 |
| chr5.2 | exon | 59346735 | 59347514 | 59346735 | ID=MS.gene44889.t1.exon4;Parent=MS.gene44889.t1 |
| chr5.2 | CDS | 59346735 | 59347514 | 59346735 | ID=cds.MS.gene44889.t1;Parent=MS.gene44889.t1 |
| Gene Sequence |
| Protein sequence |
