Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45571.t1 | XP_003620150.1 | 99.4 | 323 | 2 | 0 | 1 | 323 | 1 | 323 | 9.80E-179 | 636 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45571.t1 | Q6ZL94 | 86.8 | 325 | 37 | 2 | 5 | 323 | 7 | 331 | 7.4e-159 | 561.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45571.t1 | G7KKB4 | 99.4 | 323 | 2 | 0 | 1 | 323 | 1 | 323 | 7.1e-179 | 636.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05212 | MS.gene45571 | 0.903868 | 2.22E-79 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45571.t1 | MTR_6g077820 | 99.381 | 323 | 2 | 0 | 1 | 323 | 1 | 323 | 0.0 | 650 |
| MS.gene45571.t1 | MTR_2g034090 | 32.710 | 214 | 132 | 3 | 116 | 318 | 104 | 316 | 3.05e-22 | 97.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45571.t1 | AT5G23250 | 85.981 | 321 | 40 | 2 | 5 | 323 | 24 | 341 | 0.0 | 559 |
| MS.gene45571.t1 | AT5G08300 | 87.622 | 307 | 36 | 1 | 19 | 323 | 40 | 346 | 0.0 | 555 |
| MS.gene45571.t1 | AT5G23250 | 87.636 | 275 | 29 | 2 | 5 | 277 | 24 | 295 | 6.46e-175 | 486 |
| MS.gene45571.t1 | AT5G23250 | 86.026 | 229 | 27 | 2 | 5 | 231 | 24 | 249 | 2.31e-141 | 400 |
| MS.gene45571.t1 | AT3G06650 | 31.776 | 214 | 134 | 3 | 116 | 318 | 104 | 316 | 2.01e-21 | 95.1 |
| MS.gene45571.t1 | AT3G06650 | 31.776 | 214 | 134 | 3 | 116 | 318 | 104 | 316 | 2.01e-21 | 95.1 |
| MS.gene45571.t1 | AT5G49460 | 32.243 | 214 | 133 | 3 | 116 | 318 | 104 | 316 | 2.86e-21 | 94.7 |
| MS.gene45571.t1 | AT5G49460 | 32.243 | 214 | 133 | 3 | 116 | 318 | 104 | 316 | 2.86e-21 | 94.7 |
Find 96 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCGAACAAGCGATCGAATA+TGG | 0.237150 | 6.4:+52465761 | MS.gene45571:CDS |
| AATTCAGGTATTATTCTTAT+TGG | 0.247983 | 6.4:+52468316 | MS.gene45571:intron |
| AAAGGCGGAACGGAACATTT+AGG | 0.283162 | 6.4:+52465815 | MS.gene45571:CDS |
| ATTATTCTTATTGGAGAGAT+AGG | 0.288969 | 6.4:+52468325 | MS.gene45571:CDS |
| CCTGTTGTTGCATTTATTGC+TGG | 0.315893 | 6.4:+52468985 | MS.gene45571:CDS |
| GATCGAATATGGAACGAATA+TGG | 0.316829 | 6.4:+52465772 | MS.gene45571:CDS |
| TGGTCCTATCAAACGAGTTT+TGG | 0.319821 | 6.4:-52467414 | None:intergenic |
| AAGCCCGGGGAATGTAAAAT+TGG | 0.326008 | 6.4:+52467455 | MS.gene45571:CDS |
| AAGGCGGAACGGAACATTTA+GGG | 0.329459 | 6.4:+52465816 | MS.gene45571:CDS |
| GTGGAGTCCCCAGCTAAAAT+TGG | 0.338774 | 6.4:+52469624 | MS.gene45571:CDS |
| AACGGAACATTTAGGGCTTC+CGG | 0.344291 | 6.4:+52465823 | MS.gene45571:CDS |
| TGTTCCGTTCCGCCTTTCTT+AGG | 0.352042 | 6.4:-52465809 | None:intergenic |
| TCCATATTCGATCGCTTGTT+CGG | 0.380007 | 6.4:-52465762 | None:intergenic |
| ATTGGAATTGTTTCTCGTTC+TGG | 0.384214 | 6.4:+52467512 | MS.gene45571:CDS |
| AAAGATGTACCTTCTGTTTG+AGG | 0.393263 | 6.4:-52468158 | None:intergenic |
| TGAGAAGCTGCGGCGGTTGT+TGG | 0.395590 | 6.4:-52465654 | None:intergenic |
| CAAACAACTGCTGTTGGCCT+TGG | 0.397173 | 6.4:+52468053 | MS.gene45571:CDS |
| AACAAAGTTTGTTCCATTGA+AGG | 0.409176 | 6.4:-52468108 | None:intergenic |
| AGGGATTCCTCAACATGATA+TGG | 0.409706 | 6.4:+52465982 | MS.gene45571:CDS |
| GGACGCTGCTGCTCTAATTA+AGG | 0.414347 | 6.4:+52468363 | MS.gene45571:CDS |
| CAATCCAAAACTCGTTTGAT+AGG | 0.420569 | 6.4:+52467410 | MS.gene45571:CDS |
| AAGACAAAATCAGCACCCTT+AGG | 0.428915 | 6.4:+52469583 | MS.gene45571:CDS |
| CAAGGCCAACAGCAGTTGTT+TGG | 0.431303 | 6.4:-52468052 | None:intergenic |
| ATCAGCACCCTTAGGGAAGC+TGG | 0.437867 | 6.4:+52469591 | MS.gene45571:CDS |
| TTGATGATACCAGGGCAGTT+TGG | 0.446440 | 6.4:-52467434 | None:intergenic |
| TCCACATGTGTGGGCATTGG+AGG | 0.447053 | 6.4:+52468080 | MS.gene45571:CDS |
| CCGGGTTACATTCACAAACC+TGG | 0.447993 | 6.4:+52467485 | MS.gene45571:CDS |
| GCGTGTCCCATACGACGGCC+AGG | 0.457054 | 6.4:-52469021 | None:intergenic |
| TCTTGTGCAGCTATTGTGTC+AGG | 0.457964 | 6.4:+52469543 | MS.gene45571:intron |
| ACAAAGTTTGTTCCATTGAA+GGG | 0.461996 | 6.4:-52468107 | None:intergenic |
| GTGATCTGTCAAGGAATAAC+CGG | 0.473606 | 6.4:+52465719 | MS.gene45571:CDS |
| TGCCCTGGTATCATCAAGCC+CGG | 0.475481 | 6.4:+52467440 | MS.gene45571:CDS |
| ATTCACAAACCTGGGCGCAT+TGG | 0.479565 | 6.4:+52467494 | MS.gene45571:CDS |
| CCAGCAATAAATGCAACAAC+AGG | 0.479962 | 6.4:-52468985 | None:intergenic |
| CTTGTTGTTTGTATTACTGA+AGG | 0.486594 | 6.4:+52465962 | MS.gene45571:CDS |
| GGAAGCGGTTGAAGCGGAGT+TGG | 0.489889 | 6.4:+52465937 | MS.gene45571:CDS |
| CTGTGACTCCAGCTTCCCTA+AGG | 0.494628 | 6.4:-52469599 | None:intergenic |
| TGCTGCTGCTATTATGGAAG+CGG | 0.495050 | 6.4:+52465922 | MS.gene45571:CDS |
| AGCTATTGTGTCAGGTGGCA+AGG | 0.497024 | 6.4:+52469551 | MS.gene45571:intron |
| TCCCCGGGCTTGATGATACC+AGG | 0.502694 | 6.4:-52467443 | None:intergenic |
| CAATCCACATGTGTGGGCAT+TGG | 0.513242 | 6.4:+52468077 | MS.gene45571:CDS |
| GAAGCTGCGGCGGTTGTTGG+AGG | 0.514457 | 6.4:-52465651 | None:intergenic |
| TGTAAAATTGGAATCATGCC+GGG | 0.516403 | 6.4:+52467467 | MS.gene45571:CDS |
| TCCGCAACAGAATTGAAAAC+CGG | 0.517721 | 6.4:-52465842 | None:intergenic |
| GATCTGCTAGGAACTTTGTA+AGG | 0.517985 | 6.4:-52468136 | None:intergenic |
| AGACAAAATCAGCACCCTTA+GGG | 0.519396 | 6.4:+52469584 | MS.gene45571:CDS |
| TCCTCCAATGCCCACACATG+TGG | 0.524542 | 6.4:-52468081 | None:intergenic |
| ATAATAGCAGCAGCAGCAAA+AGG | 0.524930 | 6.4:-52465914 | None:intergenic |
| GCAGCAGCAGCAAAAGGAGG+AGG | 0.535843 | 6.4:-52465908 | None:intergenic |
| GGCGGTGTTACTCCTAAGAA+AGG | 0.542900 | 6.4:+52465797 | MS.gene45571:CDS |
| ATGTAAAATTGGAATCATGC+CGG | 0.544331 | 6.4:+52467466 | MS.gene45571:CDS |
| TCGACGAACACCGCCGGAGA+GGG | 0.545538 | 6.4:-52465683 | None:intergenic |
| CTGCTTGAAAATATCAAACA+TGG | 0.547001 | 6.4:-52469652 | None:intergenic |
| ATTGGAGGAGACCCCTTCAA+TGG | 0.551942 | 6.4:+52468095 | MS.gene45571:CDS |
| TTGTTGTTTGTATTACTGAA+GGG | 0.552535 | 6.4:+52465963 | MS.gene45571:CDS |
| CAAAGTTTGTTCCATTGAAG+GGG | 0.558465 | 6.4:-52468106 | None:intergenic |
| GAATGACTATTCAGGAAAGC+GGG | 0.558880 | 6.4:+52468953 | MS.gene45571:intron |
| GAAACAATTCCAATGCGCCC+AGG | 0.559949 | 6.4:-52467503 | None:intergenic |
| GCCCTGGTATCATCAAGCCC+GGG | 0.561759 | 6.4:+52467441 | MS.gene45571:CDS |
| CGTGTCCCATACGACGGCCA+GGG | 0.564279 | 6.4:-52469020 | None:intergenic |
| GCTATTGTGTCAGGTGGCAA+GGG | 0.565312 | 6.4:+52469552 | MS.gene45571:intron |
| ATTCTTATTGGAGAGATAGG+AGG | 0.566079 | 6.4:+52468328 | MS.gene45571:CDS |
| GAATATGGAACGAATATGGT+TGG | 0.570512 | 6.4:+52465776 | MS.gene45571:CDS |
| GATAGGAGGAACTGCAGAAG+AGG | 0.574249 | 6.4:+52468342 | MS.gene45571:CDS |
| GTTTACCAAACAACTGCTGT+TGG | 0.576485 | 6.4:+52468047 | MS.gene45571:CDS |
| AGCACACGCGTGATCTGTCA+AGG | 0.576838 | 6.4:+52465710 | MS.gene45571:CDS |
| TTGATAGGACCAAACTGCCC+TGG | 0.579975 | 6.4:+52467425 | MS.gene45571:CDS |
| CGGGTTACATTCACAAACCT+GGG | 0.586223 | 6.4:+52467486 | MS.gene45571:CDS |
| CCAGGTTTGTGAATGTAACC+CGG | 0.592655 | 6.4:-52467485 | None:intergenic |
| GGAAGCTGGAGTCACAGTTG+TGG | 0.594495 | 6.4:+52469605 | MS.gene45571:CDS |
| GACGAACACCGCCGGAGAGG+GGG | 0.599014 | 6.4:-52465681 | None:intergenic |
| GGCCGTCGTATGGGACACGC+TGG | 0.604310 | 6.4:+52469024 | MS.gene45571:CDS |
| CCACACATGTGGATTGTCCA+AGG | 0.608972 | 6.4:-52468070 | None:intergenic |
| CTTCTGTTTGAGGATCTGCT+AGG | 0.613418 | 6.4:-52468148 | None:intergenic |
| TGTGACTCCAGCTTCCCTAA+GGG | 0.620490 | 6.4:-52469598 | None:intergenic |
| TGTGCAGCTATTGTGTCAGG+TGG | 0.621206 | 6.4:+52469546 | MS.gene45571:intron |
| TACTCCTAAGAAAGGCGGAA+CGG | 0.626066 | 6.4:+52465805 | MS.gene45571:CDS |
| CTAGCAGATCCTCAAACAGA+AGG | 0.626606 | 6.4:+52468149 | MS.gene45571:CDS |
| TGGAACTTTGACATATGAAG+CGG | 0.628520 | 6.4:+52467532 | MS.gene45571:CDS |
| CGACGAACACCGCCGGAGAG+GGG | 0.629139 | 6.4:-52465682 | None:intergenic |
| TATGGAACGAATATGGTTGG+CGG | 0.631678 | 6.4:+52465779 | MS.gene45571:CDS |
| CGTCGTATGGGACACGCTGG+AGG | 0.636732 | 6.4:+52469027 | MS.gene45571:CDS |
| GGGTTGATGAGAAGCTGCGG+CGG | 0.637350 | 6.4:-52465661 | None:intergenic |
| ATAGCTACCATATCATGTTG+AGG | 0.638728 | 6.4:-52465989 | None:intergenic |
| TGAATGACTATTCAGGAAAG+CGG | 0.638917 | 6.4:+52468952 | MS.gene45571:intron |
| TATTATGGAAGCGGTTGAAG+CGG | 0.641435 | 6.4:+52465931 | MS.gene45571:CDS |
| CCCTGGTATCATCAAGCCCG+GGG | 0.644773 | 6.4:+52467442 | MS.gene45571:CDS |
| CTTGGACAATCCACATGTGT+GGG | 0.646091 | 6.4:+52468071 | MS.gene45571:CDS |
| CCTTGGACAATCCACATGTG+TGG | 0.655816 | 6.4:+52468070 | MS.gene45571:CDS |
| GTGTCCCATACGACGGCCAG+GGG | 0.661520 | 6.4:-52469019 | None:intergenic |
| GTCGACGAACACCGCCGGAG+AGG | 0.665918 | 6.4:-52465684 | None:intergenic |
| CCCCGGGCTTGATGATACCA+GGG | 0.670275 | 6.4:-52467442 | None:intergenic |
| ATAGCAGCAGCAGCAAAAGG+AGG | 0.675861 | 6.4:-52465911 | None:intergenic |
| CTCCAGCGTGTCCCATACGA+CGG | 0.678361 | 6.4:-52469026 | None:intergenic |
| GGTGTTACTCCTAAGAAAGG+CGG | 0.705752 | 6.4:+52465800 | MS.gene45571:CDS |
| TGTCCCATACGACGGCCAGG+GGG | 0.720720 | 6.4:-52469018 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAACTGATAAAATAATAT+AGG | - | chr6.4:52468208-52468227 | None:intergenic | 10.0% |
| !!! | ACTATTTATAAAGTTTTTAA+CGG | + | chr6.4:52468915-52468934 | MS.gene45571:intron | 10.0% |
| !!! | ATTTTAATTTTCTAAAGTTT+TGG | + | chr6.4:52469053-52469072 | MS.gene45571:intron | 10.0% |
| !! | AATAGTTATAAACAAATAGA+TGG | - | chr6.4:52468024-52468043 | None:intergenic | 15.0% |
| !! | GGTATTAATATTTGAAAAAA+CGG | + | chr6.4:52466713-52466732 | MS.gene45571:intron | 15.0% |
| !! | GTAATTATTATTATCGTTAT+AGG | + | chr6.4:52466236-52466255 | MS.gene45571:intron | 15.0% |
| !! | TTTATATAGATGAATGAAAA+CGG | - | chr6.4:52467866-52467885 | None:intergenic | 15.0% |
| !!! | ATAAATTTTTGTCTTTTACT+TGG | + | chr6.4:52468407-52468426 | MS.gene45571:intron | 15.0% |
| !!! | ATTATAATTGTTATTGTCAT+AGG | + | chr6.4:52466580-52466599 | MS.gene45571:intron | 15.0% |
| !!! | TGATTTTCTCAAATTATTAA+CGG | - | chr6.4:52466314-52466333 | None:intergenic | 15.0% |
| !! | AAAGAACTTCAAATTTCAAA+TGG | - | chr6.4:52467966-52467985 | None:intergenic | 20.0% |
| !! | AATGTAAACCAAATATATGT+TGG | + | chr6.4:52466745-52466764 | MS.gene45571:intron | 20.0% |
| !! | AATTCAGGTATTATTCTTAT+TGG | + | chr6.4:52468316-52468335 | MS.gene45571:intron | 20.0% |
| !! | ATATATATTTGACCATGTTT+AGG | + | chr6.4:52469172-52469191 | MS.gene45571:intron | 20.0% |
| !! | ATTAACAGGAATAAATCATT+AGG | - | chr6.4:52468277-52468296 | None:intergenic | 20.0% |
| !! | CTATTTGTTTATAACTATTC+AGG | + | chr6.4:52468025-52468044 | MS.gene45571:intron | 20.0% |
| !! | TATATATTTGACCATGTTTA+GGG | + | chr6.4:52469173-52469192 | MS.gene45571:intron | 20.0% |
| !! | TATATTATGAATGACTATTC+AGG | + | chr6.4:52468945-52468964 | MS.gene45571:intron | 20.0% |
| !!! | AAGTTAAGATTTTTTATGTC+AGG | + | chr6.4:52467361-52467380 | MS.gene45571:intron | 20.0% |
| !!! | ACAATTTTAGAAAATAGAAG+TGG | + | chr6.4:52466214-52466233 | MS.gene45571:intron | 20.0% |
| !!! | TTATGGCTTTTGATAAAATT+GGG | + | chr6.4:52467210-52467229 | MS.gene45571:intron | 20.0% |
| !!! | TTTAGTTTTGAGTTTAATGA+TGG | + | chr6.4:52466945-52466964 | MS.gene45571:intron | 20.0% |
| !!! | TTTATGGCTTTTGATAAAAT+TGG | + | chr6.4:52467209-52467228 | MS.gene45571:intron | 20.0% |
| ! | AACAACAGTAAATTGAGAAA+GGG | - | chr6.4:52467821-52467840 | None:intergenic | 25.0% |
| ! | AATGAATATGTACATGATCT+AGG | - | chr6.4:52469489-52469508 | None:intergenic | 25.0% |
| ! | ATAGGTTAATATGTGATGTA+AGG | + | chr6.4:52466598-52466617 | MS.gene45571:intron | 25.0% |
| ! | ATATATTTGACCATGTTTAG+GGG | + | chr6.4:52469174-52469193 | MS.gene45571:intron | 25.0% |
| ! | ATGAATATGTACATGATCTA+GGG | - | chr6.4:52469488-52469507 | None:intergenic | 25.0% |
| ! | ATTATTCTTATTGGAGAGAT+AGG | + | chr6.4:52468325-52468344 | MS.gene45571:CDS | 25.0% |
| ! | ATTTGAAAAAGTTTGTCTTG+TGG | + | chr6.4:52468446-52468465 | MS.gene45571:intron | 25.0% |
| ! | CTGATAAAATAATATAGGTG+AGG | - | chr6.4:52468203-52468222 | None:intergenic | 25.0% |
| ! | GAGTTAAATTTAAGTCCATT+AGG | + | chr6.4:52468782-52468801 | MS.gene45571:intron | 25.0% |
| ! | GGCTTCTTATATTAATGTAT+CGG | + | chr6.4:52467335-52467354 | MS.gene45571:intron | 25.0% |
| ! | TAACAACAGTAAATTGAGAA+AGG | - | chr6.4:52467822-52467841 | None:intergenic | 25.0% |
| ! | TTTACAATCAAGGATGATAT+GGG | + | chr6.4:52469273-52469292 | MS.gene45571:intron | 25.0% |
| ! | TTTGAAAAAGTTTGTCTTGT+GGG | + | chr6.4:52468447-52468466 | MS.gene45571:intron | 25.0% |
| ! | TTTGTCTATTTGTCTATTAG+TGG | + | chr6.4:52467145-52467164 | MS.gene45571:intron | 25.0% |
| !! | AAATCTTCTTTTGGTGAATA+AGG | + | chr6.4:52468760-52468779 | MS.gene45571:intron | 25.0% |
| !! | AGCAATTTCAGCTTTTATAT+TGG | + | chr6.4:52469458-52469477 | MS.gene45571:intron | 25.0% |
| !! | ATAAAGTGAATTTTGTGATG+CGG | + | chr6.4:52466156-52466175 | MS.gene45571:intron | 25.0% |
| !! | TATTTTCTGTTCTATACGAA+AGG | + | chr6.4:52468845-52468864 | MS.gene45571:intron | 25.0% |
| !! | TCTTTTCAACATCAAAAACA+AGG | - | chr6.4:52467563-52467582 | None:intergenic | 25.0% |
| !! | TTTTACAATCAAGGATGATA+TGG | + | chr6.4:52469272-52469291 | MS.gene45571:intron | 25.0% |
| !!! | ATAAAAGACCTGCTTTTTTT+GGG | + | chr6.4:52467115-52467134 | MS.gene45571:intron | 25.0% |
| !!! | ATTGATGTTGAATTTTAGCA+TGG | + | chr6.4:52469138-52469157 | MS.gene45571:intron | 25.0% |
| !!! | GAAGGTACTTAAATAGAAAT+TGG | + | chr6.4:52468500-52468519 | MS.gene45571:intron | 25.0% |
| !!! | TATAAAAGACCTGCTTTTTT+TGG | + | chr6.4:52467114-52467133 | MS.gene45571:intron | 25.0% |
| !!! | TATGATACAGTTTTGTTACA+TGG | + | chr6.4:52467606-52467625 | MS.gene45571:intron | 25.0% |
| !!! | TTCTAAAGTTTTGGAAATGA+TGG | + | chr6.4:52469062-52469081 | MS.gene45571:intron | 25.0% |
| !!! | TTGATGTTGAATTTTAGCAT+GGG | + | chr6.4:52469139-52469158 | MS.gene45571:intron | 25.0% |
| !!! | TTGTTGTTTGTATTACTGAA+GGG | + | chr6.4:52465963-52465982 | MS.gene45571:CDS | 25.0% |
| !!! | TTTGATATTTTCAAGCAGAA+AGG | + | chr6.4:52469657-52469676 | MS.gene45571:CDS | 25.0% |
| AAAAGCCATAAACAAACCAA+AGG | - | chr6.4:52467201-52467220 | None:intergenic | 30.0% | |
| AAAATAATATAGGTGAGGTG+AGG | - | chr6.4:52468198-52468217 | None:intergenic | 30.0% | |
| AAAGAACAAACATATGCTCA+TGG | + | chr6.4:52468868-52468887 | MS.gene45571:intron | 30.0% | |
| AAAGGGCAAAATAAGAAAGT+TGG | - | chr6.4:52467804-52467823 | None:intergenic | 30.0% | |
| AACAAACGGTAATGATTAAC+AGG | - | chr6.4:52468291-52468310 | None:intergenic | 30.0% | |
| AATAGCTGCACAAGAAAATA+AGG | - | chr6.4:52469538-52469557 | None:intergenic | 30.0% | |
| ACCTGAATTACACAAACAAA+CGG | - | chr6.4:52468305-52468324 | None:intergenic | 30.0% | |
| ATATCAAACCCAAAAAAAGC+AGG | - | chr6.4:52467126-52467145 | None:intergenic | 30.0% | |
| ATCACAGTTAATGAGCATTA+TGG | - | chr6.4:52468631-52468650 | None:intergenic | 30.0% | |
| ATGTAAAATTGGAATCATGC+CGG | + | chr6.4:52467466-52467485 | MS.gene45571:CDS | 30.0% | |
| CGTTATAGGTTAATATGTGT+TGG | + | chr6.4:52466250-52466269 | MS.gene45571:intron | 30.0% | |
| CTGCTTGAAAATATCAAACA+TGG | - | chr6.4:52469655-52469674 | None:intergenic | 30.0% | |
| GATTGATCTAGTGAAAGATA+GGG | + | chr6.4:52466124-52466143 | MS.gene45571:intron | 30.0% | |
| GATTGATCTGGTAAAAGATA+GGG | + | chr6.4:52466420-52466439 | MS.gene45571:intron | 30.0% | |
| GTAAGGTCTAGTTAAAGAAA+GGG | + | chr6.4:52466615-52466634 | MS.gene45571:intron | 30.0% | |
| TAATACCATTTAAGAGTCAG+TGG | - | chr6.4:52466700-52466719 | None:intergenic | 30.0% | |
| TATCGTATTATTATCTGTCG+TGG | + | chr6.4:52467745-52467764 | MS.gene45571:intron | 30.0% | |
| TATGCACAGCTAAATTAAGA+GGG | - | chr6.4:52468390-52468409 | None:intergenic | 30.0% | |
| TCTAGTTAAAGAAAGGGTTT+GGG | + | chr6.4:52466621-52466640 | MS.gene45571:intron | 30.0% | |
| TCTCAAATTATTAACGGTGT+TGG | - | chr6.4:52466308-52466327 | None:intergenic | 30.0% | |
| TGATTGATCTAGTGAAAGAT+AGG | + | chr6.4:52466123-52466142 | MS.gene45571:intron | 30.0% | |
| TGATTGATCTGGTAAAAGAT+AGG | + | chr6.4:52466419-52466438 | MS.gene45571:intron | 30.0% | |
| TGTAAGGTCTAGTTAAAGAA+AGG | + | chr6.4:52466614-52466633 | MS.gene45571:intron | 30.0% | |
| TTACAATCAAGGATGATATG+GGG | + | chr6.4:52469274-52469293 | MS.gene45571:intron | 30.0% | |
| TTATGCACAGCTAAATTAAG+AGG | - | chr6.4:52468391-52468410 | None:intergenic | 30.0% | |
| TTGAAAAAGTTTGTCTTGTG+GGG | + | chr6.4:52468448-52468467 | MS.gene45571:intron | 30.0% | |
| TTGTCTATTAGTGGAAAACT+GGG | + | chr6.4:52467154-52467173 | MS.gene45571:intron | 30.0% | |
| TTTGTCTATTAGTGGAAAAC+TGG | + | chr6.4:52467153-52467172 | MS.gene45571:intron | 30.0% | |
| ! | AACAAAGTTTGTTCCATTGA+AGG | - | chr6.4:52468111-52468130 | None:intergenic | 30.0% |
| ! | ACAAAGTTTGTTCCATTGAA+GGG | - | chr6.4:52468110-52468129 | None:intergenic | 30.0% |
| ! | AGTGCAATTGTTGTTGTTAT+AGG | + | chr6.4:52466089-52466108 | MS.gene45571:intron | 30.0% |
| ! | ATTGCTTTATTGTCATCTGA+AGG | - | chr6.4:52469444-52469463 | None:intergenic | 30.0% |
| ! | CGTAGATGTAAATCTTCTTT+TGG | + | chr6.4:52468751-52468770 | MS.gene45571:intron | 30.0% |
| ! | CTTTTCATGAAACAGAGAAA+AGG | + | chr6.4:52468531-52468550 | MS.gene45571:intron | 30.0% |
| ! | GTGATATTTTCTATGATGAC+AGG | - | chr6.4:52469088-52469107 | None:intergenic | 30.0% |
| !! | CTTGTTGTTTGTATTACTGA+AGG | + | chr6.4:52465962-52465981 | MS.gene45571:CDS | 30.0% |
| !! | GAGTGTAAAAAAGTTCTAAG+AGG | + | chr6.4:52466995-52467014 | MS.gene45571:intron | 30.0% |
| !! | TGGATTGGGCAATTTATTTT+TGG | + | chr6.4:52467314-52467333 | MS.gene45571:intron | 30.0% |
| !!! | ATGAGCTGTTTTTACAATCA+AGG | + | chr6.4:52469263-52469282 | MS.gene45571:intron | 30.0% |
| AAAGATGTACCTTCTGTTTG+AGG | - | chr6.4:52468161-52468180 | None:intergenic | 35.0% | |
| ACAAATAGATGGCTTATCCA+TGG | - | chr6.4:52468013-52468032 | None:intergenic | 35.0% | |
| ACCGTTTGTTTGTGTAATTC+AGG | + | chr6.4:52468301-52468320 | MS.gene45571:intron | 35.0% | |
| AGACAAGTGCTAATGCTAAT+TGG | - | chr6.4:52469232-52469251 | None:intergenic | 35.0% | |
| AGCATTAGCACTTGTCTTAT+AGG | + | chr6.4:52469235-52469254 | MS.gene45571:intron | 35.0% | |
| AGCTGACACCAACATATATT+TGG | - | chr6.4:52466756-52466775 | None:intergenic | 35.0% | |
| ATAGCTACCATATCATGTTG+AGG | - | chr6.4:52465992-52466011 | None:intergenic | 35.0% | |
| ATCTAGTGAAAGATAGGGTT+AGG | + | chr6.4:52466129-52466148 | MS.gene45571:intron | 35.0% | |
| ATCTGGTAAAAGATAGGGTT+GGG | + | chr6.4:52466425-52466444 | MS.gene45571:intron | 35.0% | |
| ATTATGTTTCGACTCTGCTA+TGG | - | chr6.4:52467779-52467798 | None:intergenic | 35.0% | |
| ATTCTTATTGGAGAGATAGG+AGG | + | chr6.4:52468328-52468347 | MS.gene45571:CDS | 35.0% | |
| CAAATAGATGGCTTATCCAT+GGG | - | chr6.4:52468012-52468031 | None:intergenic | 35.0% | |
| CAATCCAAAACTCGTTTGAT+AGG | + | chr6.4:52467410-52467429 | MS.gene45571:CDS | 35.0% | |
| CACCAGTTAATAACACCTAA+TGG | - | chr6.4:52468800-52468819 | None:intergenic | 35.0% | |
| CACCATAGGCAATTTGTAAA+GGG | + | chr6.4:52467666-52467685 | MS.gene45571:intron | 35.0% | |
| CTCCAAAGAGCTAATAGAAA+CGG | - | chr6.4:52469327-52469346 | None:intergenic | 35.0% | |
| GAATATGGAACGAATATGGT+TGG | + | chr6.4:52465776-52465795 | MS.gene45571:CDS | 35.0% | |
| GATCGAATATGGAACGAATA+TGG | + | chr6.4:52465772-52465791 | MS.gene45571:CDS | 35.0% | |
| GTCTAGTTAAAGAAAGGGTT+TGG | + | chr6.4:52466620-52466639 | MS.gene45571:intron | 35.0% | |
| TACAATCAAGGATGATATGG+GGG | + | chr6.4:52469275-52469294 | MS.gene45571:intron | 35.0% | |
| TATTCAAACACCCCTAAACA+TGG | - | chr6.4:52469187-52469206 | None:intergenic | 35.0% | |
| TCTAGTGAAAGATAGGGTTA+GGG | + | chr6.4:52466130-52466149 | MS.gene45571:intron | 35.0% | |
| TGAATGACTATTCAGGAAAG+CGG | + | chr6.4:52468952-52468971 | MS.gene45571:intron | 35.0% | |
| TGGAACTTTGACATATGAAG+CGG | + | chr6.4:52467532-52467551 | MS.gene45571:CDS | 35.0% | |
| TGTAAAATTGGAATCATGCC+GGG | + | chr6.4:52467467-52467486 | MS.gene45571:CDS | 35.0% | |
| TTATGTTTCGACTCTGCTAT+GGG | - | chr6.4:52467778-52467797 | None:intergenic | 35.0% | |
| TTCCATGTAAGACAACTTCA+GGG | - | chr6.4:52468483-52468502 | None:intergenic | 35.0% | |
| ! | ACTGTTGAGTTTGTTCTAGT+AGG | + | chr6.4:52467582-52467601 | MS.gene45571:intron | 35.0% |
| ! | ATGGTGATCTTTATTTGTGC+TGG | + | chr6.4:52468821-52468840 | MS.gene45571:intron | 35.0% |
| ! | ATTCCAATTTTACATTCCCC+GGG | - | chr6.4:52467461-52467480 | None:intergenic | 35.0% |
| ! | ATTGGAATTGTTTCTCGTTC+TGG | + | chr6.4:52467512-52467531 | MS.gene45571:CDS | 35.0% |
| ! | CAAAGTTTGTTCCATTGAAG+GGG | - | chr6.4:52468109-52468128 | None:intergenic | 35.0% |
| ! | CCATTTTCCCAAATTACAAC+CGG | - | chr6.4:52466498-52466517 | None:intergenic | 35.0% |
| ! | CTGTTGAGTTTGTTCTAGTA+GGG | + | chr6.4:52467583-52467602 | MS.gene45571:intron | 35.0% |
| ! | GATTCCAATTTTACATTCCC+CGG | - | chr6.4:52467462-52467481 | None:intergenic | 35.0% |
| ! | GTTGTCTTTTATTGAGTACC+AGG | + | chr6.4:52467921-52467940 | MS.gene45571:intron | 35.0% |
| ! | GTTTCTATTAGCTCTTTGGA+GGG | + | chr6.4:52469326-52469345 | MS.gene45571:intron | 35.0% |
| !! | AAGTTCTAAGAGGTGAGTTA+TGG | + | chr6.4:52467005-52467024 | MS.gene45571:intron | 35.0% |
| !! | AGGTGTTATTAACTGGTGAA+TGG | + | chr6.4:52468802-52468821 | MS.gene45571:intron | 35.0% |
| !! | ATATGCCACTGACTCTTAAA+TGG | + | chr6.4:52466692-52466711 | MS.gene45571:intron | 35.0% |
| !! | GTCCATTAGGTGTTATTAAC+TGG | + | chr6.4:52468795-52468814 | MS.gene45571:intron | 35.0% |
| !! | TTCATAGGTGTTGATTGATC+TGG | + | chr6.4:52466408-52466427 | MS.gene45571:intron | 35.0% |
| !!! | ATGAGAAGAGTTTTGTTACG+CGG | - | chr6.4:52465625-52465644 | None:intergenic | 35.0% |
| !!! | TTTCCTTGCGTTTTGAGTTT+GGG | + | chr6.4:52467257-52467276 | MS.gene45571:intron | 35.0% |
| AAAAGTTTGTCTTGTGGGGA+AGG | + | chr6.4:52468452-52468471 | MS.gene45571:intron | 40.0% | |
| AAAGTTTGTCTTGTGGGGAA+GGG | + | chr6.4:52468453-52468472 | MS.gene45571:intron | 40.0% | |
| AAGACAAAATCAGCACCCTT+AGG | + | chr6.4:52469583-52469602 | MS.gene45571:CDS | 40.0% | |
| ACAACATTGCGGTTTATGGA+AGG | - | chr6.4:52467695-52467714 | None:intergenic | 40.0% | |
| AGAAAGGCTTAGTGCAATAG+TGG | + | chr6.4:52469673-52469692 | MS.gene45571:CDS | 40.0% | |
| AGACAAAATCAGCACCCTTA+GGG | + | chr6.4:52469584-52469603 | MS.gene45571:CDS | 40.0% | |
| AGCAAACCCAGAACTAAAGT+TGG | - | chr6.4:52468681-52468700 | None:intergenic | 40.0% | |
| AGCCAGTTTCTTCATGGATT+GGG | + | chr6.4:52467300-52467319 | MS.gene45571:intron | 40.0% | |
| AGGGATTCCTCAACATGATA+TGG | + | chr6.4:52465982-52466001 | MS.gene45571:CDS | 40.0% | |
| AGTCACAACATTGCGGTTTA+TGG | - | chr6.4:52467699-52467718 | None:intergenic | 40.0% | |
| ATAATAGCAGCAGCAGCAAA+AGG | - | chr6.4:52465917-52465936 | None:intergenic | 40.0% | |
| ATCCCTGAAGTTGTCTTACA+TGG | + | chr6.4:52468478-52468497 | MS.gene45571:intron | 40.0% | |
| ATTAACTCCCAAGATAAGCC+TGG | - | chr6.4:52467942-52467961 | None:intergenic | 40.0% | |
| ATTGAGTACCAGGCTTATCT+TGG | + | chr6.4:52467931-52467950 | MS.gene45571:intron | 40.0% | |
| ATTGCAAGTGTGCCTGTTAA+AGG | + | chr6.4:52468653-52468672 | MS.gene45571:intron | 40.0% | |
| ATTGCTCATTTGTGAGCCTT+TGG | + | chr6.4:52467182-52467201 | MS.gene45571:intron | 40.0% | |
| CAAGGAATAACCGGCAAAAA+CGG | + | chr6.4:52465728-52465747 | MS.gene45571:CDS | 40.0% | |
| CCACCATAGGCAATTTGTAA+AGG | + | chr6.4:52467665-52467684 | MS.gene45571:intron | 40.0% | |
| CCAGCAATAAATGCAACAAC+AGG | - | chr6.4:52468988-52469007 | None:intergenic | 40.0% | |
| CCGGTTGTAATTTGGGAAAA+TGG | + | chr6.4:52466495-52466514 | MS.gene45571:intron | 40.0% | |
| CCTGTTGTTGCATTTATTGC+TGG | + | chr6.4:52468985-52469004 | MS.gene45571:CDS | 40.0% | |
| CCTTTACAAATTGCCTATGG+TGG | - | chr6.4:52467668-52467687 | None:intergenic | 40.0% | |
| CTAAAGTTGGGACCTTTAAC+AGG | - | chr6.4:52468668-52468687 | None:intergenic | 40.0% | |
| CTCCCTTTACAAATTGCCTA+TGG | - | chr6.4:52467671-52467690 | None:intergenic | 40.0% | |
| CTGAAGTTGTCTTACATGGA+AGG | + | chr6.4:52468482-52468501 | MS.gene45571:intron | 40.0% | |
| CTTCCATGTAAGACAACTTC+AGG | - | chr6.4:52468484-52468503 | None:intergenic | 40.0% | |
| GAATGACTATTCAGGAAAGC+GGG | + | chr6.4:52468953-52468972 | MS.gene45571:intron | 40.0% | |
| GATCTGCTAGGAACTTTGTA+AGG | - | chr6.4:52468139-52468158 | None:intergenic | 40.0% | |
| GATCTGGTAAAAGATAGGGT+TGG | + | chr6.4:52466424-52466443 | MS.gene45571:intron | 40.0% | |
| GCAAACCCAGAACTAAAGTT+GGG | - | chr6.4:52468680-52468699 | None:intergenic | 40.0% | |
| GCACAAACACTCTTCAGATT+AGG | - | chr6.4:52466388-52466407 | None:intergenic | 40.0% | |
| GGAGAATAGATGTGAGAACA+AGG | - | chr6.4:52468610-52468629 | None:intergenic | 40.0% | |
| GGAGGGTGAGAACAATTTAT+GGG | + | chr6.4:52469343-52469362 | MS.gene45571:intron | 40.0% | |
| GTGATCTGTCAAGGAATAAC+CGG | + | chr6.4:52465719-52465738 | MS.gene45571:CDS | 40.0% | |
| GTTTACCAAACAACTGCTGT+TGG | + | chr6.4:52468047-52468066 | MS.gene45571:CDS | 40.0% | |
| TACACTAGCCAGTTTCTTCA+TGG | + | chr6.4:52467294-52467313 | MS.gene45571:intron | 40.0% | |
| TAGCCAGTTTCTTCATGGAT+TGG | + | chr6.4:52467299-52467318 | MS.gene45571:intron | 40.0% | |
| TATGGAACGAATATGGTTGG+CGG | + | chr6.4:52465779-52465798 | MS.gene45571:CDS | 40.0% | |
| TATGTTTCGACTCTGCTATG+GGG | - | chr6.4:52467777-52467796 | None:intergenic | 40.0% | |
| TATTATGGAAGCGGTTGAAG+CGG | + | chr6.4:52465931-52465950 | MS.gene45571:CDS | 40.0% | |
| TCCATATTCGATCGCTTGTT+CGG | - | chr6.4:52465765-52465784 | None:intergenic | 40.0% | |
| TCCGCAACAGAATTGAAAAC+CGG | - | chr6.4:52465845-52465864 | None:intergenic | 40.0% | |
| TCTGGTAAAAGATAGGGTTG+GGG | + | chr6.4:52466426-52466445 | MS.gene45571:intron | 40.0% | |
| TGGAGGGTGAGAACAATTTA+TGG | + | chr6.4:52469342-52469361 | MS.gene45571:intron | 40.0% | |
| TTGAGTACCAGGCTTATCTT+GGG | + | chr6.4:52467932-52467951 | MS.gene45571:intron | 40.0% | |
| TTTAACAGGCACACTTGCAA+TGG | - | chr6.4:52468654-52468673 | None:intergenic | 40.0% | |
| TTTGATGCATACAGCACGAT+TGG | + | chr6.4:52467984-52468003 | MS.gene45571:intron | 40.0% | |
| ! | AAAGGTCCCAACTTTAGTTC+TGG | + | chr6.4:52468671-52468690 | MS.gene45571:intron | 40.0% |
| ! | CGTTTCTATTAGCTCTTTGG+AGG | + | chr6.4:52469325-52469344 | MS.gene45571:intron | 40.0% |
| ! | GTAGACACCGGTTGTAATTT+GGG | + | chr6.4:52466488-52466507 | MS.gene45571:intron | 40.0% |
| ! | TAGGTGCTACATGCAAACTA+GGG | + | chr6.4:52466835-52466854 | MS.gene45571:intron | 40.0% |
| ! | TCCGGTTTTCAATTCTGTTG+CGG | + | chr6.4:52465841-52465860 | MS.gene45571:CDS | 40.0% |
| ! | TGCCGTTTCTATTAGCTCTT+TGG | + | chr6.4:52469322-52469341 | MS.gene45571:intron | 40.0% |
| ! | TGGTCCTATCAAACGAGTTT+TGG | - | chr6.4:52467417-52467436 | None:intergenic | 40.0% |
| ! | TGTAGACACCGGTTGTAATT+TGG | + | chr6.4:52466487-52466506 | MS.gene45571:intron | 40.0% |
| ! | TTTTGCTGCTGCTGCTATTA+TGG | + | chr6.4:52465916-52465935 | MS.gene45571:CDS | 40.0% |
| !! | AACTTTAGTTCTGGGTTTGC+TGG | + | chr6.4:52468680-52468699 | MS.gene45571:intron | 40.0% |
| !! | AAGGTCCCAACTTTAGTTCT+GGG | + | chr6.4:52468672-52468691 | MS.gene45571:intron | 40.0% |
| !! | GAAGAGTGTTTGTGCTTCAT+AGG | + | chr6.4:52466393-52466412 | MS.gene45571:intron | 40.0% |
| !! | GTGAGCCTTTGGTTTGTTTA+TGG | + | chr6.4:52467193-52467212 | MS.gene45571:intron | 40.0% |
| !!! | GTTTCCTTGCGTTTTGAGTT+TGG | + | chr6.4:52467256-52467275 | MS.gene45571:intron | 40.0% |
| AAAGGCGGAACGGAACATTT+AGG | + | chr6.4:52465815-52465834 | MS.gene45571:CDS | 45.0% | |
| AAGCCCGGGGAATGTAAAAT+TGG | + | chr6.4:52467455-52467474 | MS.gene45571:CDS | 45.0% | |
| AAGGCGGAACGGAACATTTA+GGG | + | chr6.4:52465816-52465835 | MS.gene45571:CDS | 45.0% | |
| ACCGAACAAGCGATCGAATA+TGG | + | chr6.4:52465761-52465780 | MS.gene45571:CDS | 45.0% | |
| ATGCCCAAACTCAAAACGCA+AGG | - | chr6.4:52467263-52467282 | None:intergenic | 45.0% | |
| ATGTTTCGACTCTGCTATGG+GGG | - | chr6.4:52467776-52467795 | None:intergenic | 45.0% | |
| CCAGGTTTGTGAATGTAACC+CGG | - | chr6.4:52467488-52467507 | None:intergenic | 45.0% | |
| CGGGTTACATTCACAAACCT+GGG | + | chr6.4:52467486-52467505 | MS.gene45571:CDS | 45.0% | |
| CTAGCAGATCCTCAAACAGA+AGG | + | chr6.4:52468149-52468168 | MS.gene45571:CDS | 45.0% | |
| CTTCTGTTTGAGGATCTGCT+AGG | - | chr6.4:52468151-52468170 | None:intergenic | 45.0% | |
| CTTGGACAATCCACATGTGT+GGG | + | chr6.4:52468071-52468090 | MS.gene45571:CDS | 45.0% | |
| GATGTGCAGTCACAACATTG+CGG | - | chr6.4:52467706-52467725 | None:intergenic | 45.0% | |
| GCACCTACATGTCACATCAA+AGG | - | chr6.4:52466822-52466841 | None:intergenic | 45.0% | |
| GCACCTTTGATGTGACATGT+AGG | + | chr6.4:52466816-52466835 | MS.gene45571:intron | 45.0% | |
| GTCAATGTCGTGTCAAGTGT+CGG | - | chr6.4:52466185-52466204 | None:intergenic | 45.0% | |
| TACAAATTGCCTATGGTGGC+TGG | - | chr6.4:52467664-52467683 | None:intergenic | 45.0% | |
| TACTCCTAAGAAAGGCGGAA+CGG | + | chr6.4:52465805-52465824 | MS.gene45571:CDS | 45.0% | |
| TCTTGTGCAGCTATTGTGTC+AGG | + | chr6.4:52469543-52469562 | MS.gene45571:intron | 45.0% | |
| TGCCCAATCCATGAAGAAAC+TGG | - | chr6.4:52467305-52467324 | None:intergenic | 45.0% | |
| TGCTGCTGCTATTATGGAAG+CGG | + | chr6.4:52465922-52465941 | MS.gene45571:CDS | 45.0% | |
| TGGGGTTATGGACATGCAAA+AGG | + | chr6.4:52468706-52468725 | MS.gene45571:intron | 45.0% | |
| ! | AACGGAACATTTAGGGCTTC+CGG | + | chr6.4:52465823-52465842 | MS.gene45571:CDS | 45.0% |
| ! | GTAGGTGCTACATGCAAACT+AGG | + | chr6.4:52466834-52466853 | MS.gene45571:intron | 45.0% |
| ! | TTGATGATACCAGGGCAGTT+TGG | - | chr6.4:52467437-52467456 | None:intergenic | 45.0% |
| !! | ATGGCAGCTCCAATTTTAGC+TGG | - | chr6.4:52469636-52469655 | None:intergenic | 45.0% |
| !! | GGTGTTACTCCTAAGAAAGG+CGG | + | chr6.4:52465800-52465819 | MS.gene45571:CDS | 45.0% |
| !! | GTGAAACGTTCCGTTTTTGC+CGG | - | chr6.4:52465741-52465760 | None:intergenic | 45.0% |
| !!! | AGAAGAGTTTTGTTACGCGG+TGG | - | chr6.4:52465622-52465641 | None:intergenic | 45.0% |
| !!! | GGATTTTTTCCAGCCACCAT+AGG | + | chr6.4:52467652-52467671 | MS.gene45571:intron | 45.0% |
| !!! | TGGCAGCTCCAATTTTAGCT+GGG | - | chr6.4:52469635-52469654 | None:intergenic | 45.0% |
| AGCTATTGTGTCAGGTGGCA+AGG | + | chr6.4:52469551-52469570 | MS.gene45571:intron | 50.0% | |
| ATAGCAGCAGCAGCAAAAGG+AGG | - | chr6.4:52465914-52465933 | None:intergenic | 50.0% | |
| ATTCACAAACCTGGGCGCAT+TGG | + | chr6.4:52467494-52467513 | MS.gene45571:CDS | 50.0% | |
| ATTGGAGGAGACCCCTTCAA+TGG | + | chr6.4:52468095-52468114 | MS.gene45571:CDS | 50.0% | |
| CAAGGCCAACAGCAGTTGTT+TGG | - | chr6.4:52468055-52468074 | None:intergenic | 50.0% | |
| CAATCCACATGTGTGGGCAT+TGG | + | chr6.4:52468077-52468096 | MS.gene45571:CDS | 50.0% | |
| CCGGGTTACATTCACAAACC+TGG | + | chr6.4:52467485-52467504 | MS.gene45571:CDS | 50.0% | |
| CCTTGGACAATCCACATGTG+TGG | + | chr6.4:52468070-52468089 | MS.gene45571:CDS | 50.0% | |
| GAAACAATTCCAATGCGCCC+AGG | - | chr6.4:52467506-52467525 | None:intergenic | 50.0% | |
| GATAGGAGGAACTGCAGAAG+AGG | + | chr6.4:52468342-52468361 | MS.gene45571:CDS | 50.0% | |
| GATTAGGCGTGTACACGTGT+CGG | - | chr6.4:52466372-52466391 | None:intergenic | 50.0% | |
| GCACACACACATGTAGACAC+CGG | + | chr6.4:52466476-52466495 | MS.gene45571:intron | 50.0% | |
| GCTATTGTGTCAGGTGGCAA+GGG | + | chr6.4:52469552-52469571 | MS.gene45571:intron | 50.0% | |
| GGACGCTGCTGCTCTAATTA+AGG | + | chr6.4:52468363-52468382 | MS.gene45571:CDS | 50.0% | |
| GTGCTACATGCAAACTAGGG+TGG | + | chr6.4:52466838-52466857 | MS.gene45571:intron | 50.0% | |
| GTGGAGTCCCCAGCTAAAAT+TGG | + | chr6.4:52469624-52469643 | MS.gene45571:CDS | 50.0% | |
| TACAGCACGATTGGTACCCA+TGG | + | chr6.4:52467993-52468012 | MS.gene45571:intron | 50.0% | |
| TGTGCAGCTATTGTGTCAGG+TGG | + | chr6.4:52469546-52469565 | MS.gene45571:intron | 50.0% | |
| TGTTCCGTTCCGCCTTTCTT+AGG | - | chr6.4:52465812-52465831 | None:intergenic | 50.0% | |
| TTGATAGGACCAAACTGCCC+TGG | + | chr6.4:52467425-52467444 | MS.gene45571:CDS | 50.0% | |
| ! | CAAACAACTGCTGTTGGCCT+TGG | + | chr6.4:52468053-52468072 | MS.gene45571:CDS | 50.0% |
| ! | CCACACATGTGGATTGTCCA+AGG | - | chr6.4:52468073-52468092 | None:intergenic | 50.0% |
| !! | AGTTCTGGGTTTGCTGGTAG+TGG | + | chr6.4:52468686-52468705 | MS.gene45571:intron | 50.0% |
| !! | GGCGGTGTTACTCCTAAGAA+AGG | + | chr6.4:52465797-52465816 | MS.gene45571:CDS | 50.0% |
| !! | GTTCTGGGTTTGCTGGTAGT+GGG | + | chr6.4:52468687-52468706 | MS.gene45571:intron | 50.0% |
| !! | GTTTGCTGGTAGTGGGGTTA+TGG | + | chr6.4:52468694-52468713 | MS.gene45571:intron | 50.0% |
| !! | TTCTGGGTTTGCTGGTAGTG+GGG | + | chr6.4:52468688-52468707 | MS.gene45571:intron | 50.0% |
| !!! | GGCAGCTCCAATTTTAGCTG+GGG | - | chr6.4:52469634-52469653 | None:intergenic | 50.0% |
| AGCACACGCGTGATCTGTCA+AGG | + | chr6.4:52465710-52465729 | MS.gene45571:CDS | 55.0% | |
| CTTCTCATCAACCCCCTCTC+CGG | + | chr6.4:52465670-52465689 | MS.gene45571:CDS | 55.0% | |
| TAGGGTTGGGGTGACTACGA+TGG | + | chr6.4:52466438-52466457 | MS.gene45571:intron | 55.0% | |
| TCCAACACGACACTCTGTCG+TGG | - | chr6.4:52467635-52467654 | None:intergenic | 55.0% | |
| TCCTCCAATGCCCACACATG+TGG | - | chr6.4:52468084-52468103 | None:intergenic | 55.0% | |
| TGCCCTGGTATCATCAAGCC+CGG | + | chr6.4:52467440-52467459 | MS.gene45571:CDS | 55.0% | |
| ! | CTTTTGTCGACGAACACCGC+CGG | - | chr6.4:52465692-52465711 | None:intergenic | 55.0% |
| !! | AGGGGGTTGATGAGAAGCTG+CGG | - | chr6.4:52465667-52465686 | None:intergenic | 55.0% |
| !! | TCCACATGTGTGGGCATTGG+AGG | + | chr6.4:52468080-52468099 | MS.gene45571:CDS | 55.0% |
| CCCTGGTATCATCAAGCCCG+GGG | + | chr6.4:52467442-52467461 | MS.gene45571:CDS | 60.0% | |
| CTCCAGCGTGTCCCATACGA+CGG | - | chr6.4:52469029-52469048 | None:intergenic | 60.0% | |
| GCAGCAGCAGCAAAAGGAGG+AGG | - | chr6.4:52465911-52465930 | None:intergenic | 60.0% | |
| GCCCTGGTATCATCAAGCCC+GGG | + | chr6.4:52467441-52467460 | MS.gene45571:CDS | 60.0% | |
| GCTGGATTAACTGCTCCCCC+TGG | + | chr6.4:52469003-52469022 | MS.gene45571:CDS | 60.0% | |
| GGAAGCGGTTGAAGCGGAGT+TGG | + | chr6.4:52465937-52465956 | MS.gene45571:CDS | 60.0% | |
| TGAGAAGCTGCGGCGGTTGT+TGG | - | chr6.4:52465657-52465676 | None:intergenic | 60.0% | |
| ! | CCCCGGGCTTGATGATACCA+GGG | - | chr6.4:52467445-52467464 | None:intergenic | 60.0% |
| ! | TCCCCGGGCTTGATGATACC+AGG | - | chr6.4:52467446-52467465 | None:intergenic | 60.0% |
| !! | GCCACGACAGAGTGTCGTGT+TGG | + | chr6.4:52467631-52467650 | MS.gene45571:intron | 60.0% |
| !! | GGGTTGATGAGAAGCTGCGG+CGG | - | chr6.4:52465664-52465683 | None:intergenic | 60.0% |
| CGTCGTATGGGACACGCTGG+AGG | + | chr6.4:52469027-52469046 | MS.gene45571:CDS | 65.0% | |
| CGTGTCCCATACGACGGCCA+GGG | - | chr6.4:52469023-52469042 | None:intergenic | 65.0% | |
| CTCATCAACCCCCTCTCCGG+CGG | + | chr6.4:52465673-52465692 | MS.gene45571:CDS | 65.0% | |
| GAAGCTGCGGCGGTTGTTGG+AGG | - | chr6.4:52465654-52465673 | None:intergenic | 65.0% | |
| GTGTCCCATACGACGGCCAG+GGG | - | chr6.4:52469022-52469041 | None:intergenic | 65.0% | |
| TCGACGAACACCGCCGGAGA+GGG | - | chr6.4:52465686-52465705 | None:intergenic | 65.0% | |
| TGTCCCATACGACGGCCAGG+GGG | - | chr6.4:52469021-52469040 | None:intergenic | 65.0% | |
| CGACGAACACCGCCGGAGAG+GGG | - | chr6.4:52465685-52465704 | None:intergenic | 70.0% | |
| GACGAACACCGCCGGAGAGG+GGG | - | chr6.4:52465684-52465703 | None:intergenic | 70.0% | |
| GCGTGTCCCATACGACGGCC+AGG | - | chr6.4:52469024-52469043 | None:intergenic | 70.0% | |
| GCTCCCCCTGGCCGTCGTAT+GGG | + | chr6.4:52469015-52469034 | MS.gene45571:CDS | 70.0% | |
| GGCCGTCGTATGGGACACGC+TGG | + | chr6.4:52469024-52469043 | MS.gene45571:CDS | 70.0% | |
| GTCGACGAACACCGCCGGAG+AGG | - | chr6.4:52465687-52465706 | None:intergenic | 70.0% | |
| TGCTCCCCCTGGCCGTCGTA+TGG | + | chr6.4:52469014-52469033 | MS.gene45571:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 52465611 | 52469692 | 52465611 | ID=MS.gene45571 |
| chr6.4 | mRNA | 52465611 | 52469692 | 52465611 | ID=MS.gene45571.t1;Parent=MS.gene45571 |
| chr6.4 | exon | 52465611 | 52466003 | 52465611 | ID=MS.gene45571.t1.exon1;Parent=MS.gene45571.t1 |
| chr6.4 | CDS | 52465611 | 52466003 | 52465611 | ID=cds.MS.gene45571.t1;Parent=MS.gene45571.t1 |
| chr6.4 | exon | 52467383 | 52467553 | 52467383 | ID=MS.gene45571.t1.exon2;Parent=MS.gene45571.t1 |
| chr6.4 | CDS | 52467383 | 52467553 | 52467383 | ID=cds.MS.gene45571.t1;Parent=MS.gene45571.t1 |
| chr6.4 | exon | 52468047 | 52468170 | 52468047 | ID=MS.gene45571.t1.exon3;Parent=MS.gene45571.t1 |
| chr6.4 | CDS | 52468047 | 52468170 | 52468047 | ID=cds.MS.gene45571.t1;Parent=MS.gene45571.t1 |
| chr6.4 | exon | 52468323 | 52468384 | 52468323 | ID=MS.gene45571.t1.exon4;Parent=MS.gene45571.t1 |
| chr6.4 | CDS | 52468323 | 52468384 | 52468323 | ID=cds.MS.gene45571.t1;Parent=MS.gene45571.t1 |
| chr6.4 | exon | 52468967 | 52469048 | 52468967 | ID=MS.gene45571.t1.exon5;Parent=MS.gene45571.t1 |
| chr6.4 | CDS | 52468967 | 52469048 | 52468967 | ID=cds.MS.gene45571.t1;Parent=MS.gene45571.t1 |
| chr6.4 | exon | 52469553 | 52469692 | 52469553 | ID=MS.gene45571.t1.exon6;Parent=MS.gene45571.t1 |
| chr6.4 | CDS | 52469553 | 52469692 | 52469553 | ID=cds.MS.gene45571.t1;Parent=MS.gene45571.t1 |
| Gene Sequence |
| Protein sequence |
