Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45603.t1 | XP_013459405.1 | 97.9 | 378 | 8 | 0 | 1 | 378 | 84 | 461 | 6.70E-211 | 743 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45603.t1 | D3YY23 | 33.3 | 282 | 179 | 6 | 104 | 378 | 465 | 744 | 1.4e-39 | 165.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45603.t1 | A0A072UVL6 | 97.9 | 378 | 8 | 0 | 1 | 378 | 84 | 461 | 4.8e-211 | 743.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene06000 | MS.gene45603 | 0.802395 | 5.72E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45603.t1 | MTR_3g037230 | 97.884 | 378 | 8 | 0 | 1 | 378 | 37 | 414 | 0.0 | 761 |
| MS.gene45603.t1 | MTR_3g037230 | 97.884 | 378 | 8 | 0 | 1 | 378 | 84 | 461 | 0.0 | 760 |
| MS.gene45603.t1 | MTR_7g035445 | 44.737 | 76 | 40 | 2 | 103 | 177 | 154 | 228 | 6.03e-16 | 79.0 |
| MS.gene45603.t1 | MTR_3g112420 | 31.395 | 172 | 107 | 3 | 205 | 376 | 95 | 255 | 5.05e-15 | 75.1 |
| MS.gene45603.t1 | MTR_1g093975 | 40.000 | 95 | 53 | 3 | 100 | 192 | 15 | 107 | 1.08e-13 | 68.2 |
| MS.gene45603.t1 | MTR_1g094005 | 40.000 | 95 | 53 | 3 | 100 | 192 | 15 | 107 | 1.08e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45603.t1 | AT1G18660 | 67.196 | 378 | 121 | 3 | 2 | 378 | 92 | 467 | 0.0 | 538 |
| MS.gene45603.t1 | AT1G18660 | 67.196 | 378 | 121 | 3 | 2 | 378 | 92 | 467 | 0.0 | 538 |
| MS.gene45603.t1 | AT1G18660 | 67.196 | 378 | 121 | 3 | 2 | 378 | 92 | 467 | 0.0 | 538 |
| MS.gene45603.t1 | AT1G18660 | 67.196 | 378 | 121 | 3 | 2 | 378 | 92 | 467 | 0.0 | 538 |
| MS.gene45603.t1 | AT1G75460 | 31.638 | 177 | 101 | 4 | 205 | 377 | 87 | 247 | 9.80e-16 | 77.0 |
| MS.gene45603.t1 | AT1G19740 | 34.302 | 172 | 101 | 4 | 206 | 377 | 88 | 247 | 8.05e-15 | 74.3 |
| MS.gene45603.t1 | AT3G27330 | 39.024 | 82 | 48 | 2 | 103 | 183 | 720 | 800 | 3.04e-13 | 71.6 |
Find 92 sgRNAs with CRISPR-Local
Find 350 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCGGGATGTTATTCTTTC+TGG | 0.064031 | 3.1:-26915060 | MS.gene45603:CDS |
| TCACCTAATTGAACATGTTC+TGG | 0.282932 | 3.1:+26914543 | None:intergenic |
| TGAACCTCGTTATAGACTTA+TGG | 0.288842 | 3.1:-26913811 | MS.gene45603:intron |
| GAAGGCTAATGCTCTTCTTC+TGG | 0.306462 | 3.1:-26916172 | MS.gene45603:intron |
| GCCCCAGAACATGTTCAATT+AGG | 0.331905 | 3.1:-26914546 | MS.gene45603:intron |
| GTGAATGTGCAATACCTAAA+AGG | 0.332138 | 3.1:+26915024 | None:intergenic |
| ACAGGTTCATTAGCAGAGTT+TGG | 0.343388 | 3.1:-26912870 | MS.gene45603:CDS |
| GATTTCGTAACCTCCGTTCT+TGG | 0.343529 | 3.1:-26912074 | MS.gene45603:CDS |
| ACAGTATCATCTAGTTCAAC+TGG | 0.363109 | 3.1:-26914829 | MS.gene45603:CDS |
| AAAACAGGTAAGAAGAATAA+TGG | 0.364926 | 3.1:-26913042 | MS.gene45603:intron |
| CGAGGTTCAAATATATTTAG+TGG | 0.376203 | 3.1:+26913825 | None:intergenic |
| TTCATGTCTATTTCAGTCAA+TGG | 0.382042 | 3.1:-26914698 | MS.gene45603:CDS |
| TATGATTATGTGCAGATTGA+AGG | 0.391641 | 3.1:-26912105 | MS.gene45603:intron |
| ATTTCGTAACCTCCGTTCTT+GGG | 0.408981 | 3.1:-26912073 | MS.gene45603:CDS |
| TCTATATAAAATCGACCATC+TGG | 0.421960 | 3.1:+26912689 | None:intergenic |
| ACCATTTCAGCTGGGTTTGA+AGG | 0.425497 | 3.1:-26916247 | MS.gene45603:intron |
| GAGAAACTCGTGAATGTTGA+AGG | 0.427907 | 3.1:-26911116 | MS.gene45603:CDS |
| ATCATGTAGTAATTCCCTTC+GGG | 0.432755 | 3.1:-26914872 | MS.gene45603:intron |
| CACCTAATTGAACATGTTCT+GGG | 0.434320 | 3.1:+26914544 | None:intergenic |
| GTTATAATAGATGCTTCAAC+AGG | 0.438756 | 3.1:-26912888 | MS.gene45603:CDS |
| GCAGAACTGTCCTGCACAAT+GGG | 0.462841 | 3.1:+26914575 | None:intergenic |
| TTCCTTTCAGCATATTCCTC+TGG | 0.469774 | 3.1:+26913933 | None:intergenic |
| TATCATGTAGTAATTCCCTT+CGG | 0.471872 | 3.1:-26914873 | MS.gene45603:intron |
| GCATTAGCCTTCAAAAGGTA+TGG | 0.481312 | 3.1:+26916183 | None:intergenic |
| TCGTAGGCCTTCAGAAAGAT+TGG | 0.481468 | 3.1:-26910933 | MS.gene45603:CDS |
| GAAGAGCATTAGCCTTCAAA+AGG | 0.485021 | 3.1:+26916178 | None:intergenic |
| ACATACTTCGGCAAGTGTTG+TGG | 0.498459 | 3.1:+26916349 | None:intergenic |
| TGCAGAAGTTGAATGGATAC+AGG | 0.501411 | 3.1:-26911941 | MS.gene45603:CDS |
| ATCGTGTTGCAGAAGTTGAA+TGG | 0.503817 | 3.1:-26911948 | MS.gene45603:CDS |
| ATTTAGTGGAAACCTTTGAC+AGG | 0.504501 | 3.1:+26913839 | None:intergenic |
| TAGAGAAATATGACGTGGCT+CGG | 0.506027 | 3.1:-26915077 | MS.gene45603:CDS |
| CATACTTCGGCAAGTGTTGT+GGG | 0.506511 | 3.1:+26916350 | None:intergenic |
| GGAACAGATGCCCATTGTGC+AGG | 0.506693 | 3.1:-26914585 | MS.gene45603:CDS |
| CGGGTTCATACAGTAACTTC+AGG | 0.519013 | 3.1:+26914752 | None:intergenic |
| AGAGAAATATGACGTGGCTC+GGG | 0.522480 | 3.1:-26915076 | MS.gene45603:CDS |
| CTGAAGGCCTACGATTCGAG+AGG | 0.527619 | 3.1:+26910942 | None:intergenic |
| CAGCAGAAAGTGCTCGAACA+TGG | 0.534893 | 3.1:-26911277 | MS.gene45603:CDS |
| CTCCGTTCTTGGGATCAAGA+TGG | 0.536161 | 3.1:-26912063 | MS.gene45603:CDS |
| GCGCTCGGGGTCTCTTAATG+AGG | 0.539035 | 3.1:+26911085 | None:intergenic |
| TCCGTTCTTGGGATCAAGAT+GGG | 0.539331 | 3.1:-26912062 | MS.gene45603:intron |
| TCGCTACCCTCTCGAATCGT+AGG | 0.543915 | 3.1:-26910949 | MS.gene45603:CDS |
| CGGCAAAATGAATGTCCACA+TGG | 0.549643 | 3.1:+26914721 | None:intergenic |
| TCAAAGTCATCATTCCGCTC+TGG | 0.550649 | 3.1:+26914787 | None:intergenic |
| TAAAATCGACCATCTGGAAG+TGG | 0.551088 | 3.1:+26912695 | None:intergenic |
| ATGTTGTCTTACCCTGTCAA+AGG | 0.552440 | 3.1:-26913851 | MS.gene45603:CDS |
| GAAAGTGCTCGAACATGGAT+AGG | 0.552863 | 3.1:-26911272 | MS.gene45603:CDS |
| GAAGGATGCTGCAAAGCTTG+TGG | 0.558715 | 3.1:-26916229 | MS.gene45603:CDS |
| TGTCCACATGGGGTTGTGAC+GGG | 0.559838 | 3.1:+26914733 | None:intergenic |
| GTGGGATCAAGCCCACTCAA+TGG | 0.562899 | 3.1:+26916368 | None:intergenic |
| AGCAGAGTTTGGCTGTGAAG+TGG | 0.562998 | 3.1:-26912859 | MS.gene45603:CDS |
| AATGACAGTTTAGTCAACAT+TGG | 0.563013 | 3.1:-26913903 | MS.gene45603:CDS |
| CATCATCATCCTCAGAACAT+AGG | 0.564721 | 3.1:-26916391 | MS.gene45603:CDS |
| AGGCAATCATCGGATGGGAA+TGG | 0.572561 | 3.1:-26913018 | MS.gene45603:intron |
| AATGGAAGGCAATCATCGGA+TGG | 0.575328 | 3.1:-26913024 | MS.gene45603:CDS |
| CAGGATATTATGCCGCCAGA+AGG | 0.576127 | 3.1:-26911922 | MS.gene45603:CDS |
| GAATAATGGAAGGCAATCAT+CGG | 0.577826 | 3.1:-26913028 | MS.gene45603:CDS |
| CGCTCGGGGTCTCTTAATGA+GGG | 0.578663 | 3.1:+26911086 | None:intergenic |
| AGCAGAACTGTCCTGCACAA+TGG | 0.587723 | 3.1:+26914574 | None:intergenic |
| CTCTTTGAAGACATTCCCGA+AGG | 0.588174 | 3.1:+26914857 | None:intergenic |
| CTGTAGTATCTCTAATGCGT+AGG | 0.595814 | 3.1:+26910906 | None:intergenic |
| AGGATATTATGCCGCCAGAA+GGG | 0.596091 | 3.1:-26911921 | MS.gene45603:CDS |
| GCTAAAGAAGCAGCAAGACA+AGG | 0.598996 | 3.1:-26911245 | MS.gene45603:intron |
| TCGGGAATGTCTTCAAAGAG+TGG | 0.601467 | 3.1:-26914854 | MS.gene45603:CDS |
| AGAAGGGACAAAAGAAAGAG+AGG | 0.602984 | 3.1:-26911905 | MS.gene45603:CDS |
| ATGGAAGGCAATCATCGGAT+GGG | 0.603310 | 3.1:-26913023 | MS.gene45603:CDS |
| TTCCAGAGGAATATGCTGAA+AGG | 0.606002 | 3.1:-26913935 | MS.gene45603:CDS |
| AGGAGATCCAATCTTTCTGA+AGG | 0.606145 | 3.1:+26910926 | None:intergenic |
| ACCCATCTTGATCCCAAGAA+CGG | 0.606671 | 3.1:+26912061 | None:intergenic |
| TTTAGTGGAAACCTTTGACA+GGG | 0.610286 | 3.1:+26913840 | None:intergenic |
| ATGTCCACATGGGGTTGTGA+CGG | 0.613672 | 3.1:+26914732 | None:intergenic |
| GGCAAAATGAATGTCCACAT+GGG | 0.614251 | 3.1:+26914722 | None:intergenic |
| CAGTATCATCTAGTTCAACT+GGG | 0.617318 | 3.1:-26914828 | MS.gene45603:CDS |
| CAGGTAAGAAGAATAATGGA+AGG | 0.621017 | 3.1:-26913038 | MS.gene45603:CDS |
| AGGTGTGAGCCACTTCCAGA+TGG | 0.625380 | 3.1:-26912704 | MS.gene45603:CDS |
| ACTCAATGGCCTATGTTCTG+AGG | 0.635518 | 3.1:+26916382 | None:intergenic |
| ATGTGCAGATTGAAGGTCGT+AGG | 0.643466 | 3.1:-26912098 | MS.gene45603:intron |
| TCAGAACATAGGCCATTGAG+TGG | 0.644909 | 3.1:-26916380 | MS.gene45603:CDS |
| CTATTTCAGTCAATGGATCG+TGG | 0.649425 | 3.1:-26914691 | MS.gene45603:intron |
| TGAAGGCCTACGATTCGAGA+GGG | 0.654293 | 3.1:+26910943 | None:intergenic |
| GAACCCGTCACAACCCCATG+TGG | 0.658345 | 3.1:-26914736 | MS.gene45603:CDS |
| TCTTTGAAGACATTCCCGAA+GGG | 0.670281 | 3.1:+26914858 | None:intergenic |
| TTGACTGAAATAGACATGAA+CGG | 0.674075 | 3.1:+26914701 | None:intergenic |
| CAGAACATAGGCCATTGAGT+GGG | 0.678923 | 3.1:-26916379 | MS.gene45603:CDS |
| GCAAAATGAATGTCCACATG+GGG | 0.682181 | 3.1:+26914723 | None:intergenic |
| ACCTAATTGAACATGTTCTG+GGG | 0.682254 | 3.1:+26914545 | None:intergenic |
| CATACAAAAGAACTTTCCAG+AGG | 0.709830 | 3.1:-26913949 | MS.gene45603:CDS |
| CATCTTGATCCCAAGAACGG+AGG | 0.727393 | 3.1:+26912064 | None:intergenic |
| GCAGTTAGAGAAATATGACG+TGG | 0.740709 | 3.1:-26915082 | MS.gene45603:intron |
| CTCACCATAAGTCTATAACG+AGG | 0.744121 | 3.1:+26913807 | None:intergenic |
| TATCATCTAGTTCAACTGGG+AGG | 0.750577 | 3.1:-26914825 | MS.gene45603:CDS |
| GTACACATGCACAACCAGAG+CGG | 0.778485 | 3.1:-26914801 | MS.gene45603:CDS |
| ACGCATTAGAGATACTACAG+AGG | 0.789082 | 3.1:-26910903 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAAAAAAAAAAAAAAAG+TGG | + | chr3.1:26915525-26915544 | None:intergenic | 10.0% |
| !! | AAAAAAAGTGGTTATATATA+AGG | + | chr3.1:26915513-26915532 | None:intergenic | 15.0% |
| !! | AAATAGTTATTGGTATTAAT+AGG | + | chr3.1:26915624-26915643 | None:intergenic | 15.0% |
| !! | AAATATGATGTAAAATTTCT+TGG | + | chr3.1:26913825-26913844 | None:intergenic | 15.0% |
| !! | AAGGAATAATTACTAAATTT+GGG | + | chr3.1:26912908-26912927 | None:intergenic | 15.0% |
| !! | AATAGTTATTGGTATTAATA+GGG | + | chr3.1:26915623-26915642 | None:intergenic | 15.0% |
| !! | AATATGATGTAAAATTTCTT+GGG | + | chr3.1:26913824-26913843 | None:intergenic | 15.0% |
| !! | ATATAACTTAAACAAGAAAA+TGG | + | chr3.1:26914340-26914359 | None:intergenic | 15.0% |
| !!! | AATTTTGAGCTATAAATAAA+TGG | + | chr3.1:26914014-26914033 | None:intergenic | 15.0% |
| !!! | ATTAATACCAATAACTATTT+TGG | - | chr3.1:26915624-26915643 | MS.gene45603:intron | 15.0% |
| !!! | TTTCTAAAACAAAAATATCA+GGG | + | chr3.1:26911213-26911232 | None:intergenic | 15.0% |
| !!! | TTTTCTAAAACAAAAATATC+AGG | + | chr3.1:26911214-26911233 | None:intergenic | 15.0% |
| !! | ACGTAGTAATATATATACAA+TGG | - | chr3.1:26911973-26911992 | MS.gene45603:intron | 20.0% |
| !! | AGGAAAATTTGTATACAAAA+TGG | - | chr3.1:26915692-26915711 | MS.gene45603:intron | 20.0% |
| !! | ATAATAATGCATACAACATA+AGG | + | chr3.1:26915927-26915946 | None:intergenic | 20.0% |
| !! | ATAGTTATTGGTATTAATAG+GGG | + | chr3.1:26915622-26915641 | None:intergenic | 20.0% |
| !! | ATGTATCTAGTAATTTGAAA+TGG | + | chr3.1:26915577-26915596 | None:intergenic | 20.0% |
| !! | CATGATTTATAAACAAATCT+AGG | + | chr3.1:26916107-26916126 | None:intergenic | 20.0% |
| !! | CGTAGTAATATATATACAAT+GGG | - | chr3.1:26911974-26911993 | MS.gene45603:intron | 20.0% |
| !! | GAAGGAATAATTACTAAATT+TGG | + | chr3.1:26912909-26912928 | None:intergenic | 20.0% |
| !! | TAAAAATATATTCTACTGCA+TGG | - | chr3.1:26914575-26914594 | MS.gene45603:CDS | 20.0% |
| !! | TAATAATGCATACAACATAA+GGG | + | chr3.1:26915926-26915945 | None:intergenic | 20.0% |
| !! | TATAGAGGTAAAAAATTAAC+TGG | - | chr3.1:26914633-26914652 | MS.gene45603:intron | 20.0% |
| !!! | AAAACAAAGAAATTGATTCA+AGG | + | chr3.1:26912838-26912857 | None:intergenic | 20.0% |
| !!! | AAATTCAGTTTTTTCTTACT+AGG | - | chr3.1:26911231-26911250 | MS.gene45603:intron | 20.0% |
| !!! | AATTTCTTTGTTTTTCTTGT+TGG | - | chr3.1:26912844-26912863 | MS.gene45603:intron | 20.0% |
| !!! | ACATGAATTTTTTTTTCCTT+TGG | + | chr3.1:26913727-26913746 | None:intergenic | 20.0% |
| !!! | ATGTAAGTTCATTTTAATTC+TGG | - | chr3.1:26915423-26915442 | MS.gene45603:intron | 20.0% |
| !!! | ATGTTGATTATATTTTCCAT+AGG | - | chr3.1:26912650-26912669 | MS.gene45603:intron | 20.0% |
| !!! | ATTATTGTTCTCATTTGTTA+GGG | - | chr3.1:26912699-26912718 | MS.gene45603:CDS | 20.0% |
| !!! | ATTTGTACAGAAGATATTTT+AGG | - | chr3.1:26915672-26915691 | MS.gene45603:intron | 20.0% |
| !!! | CATTAAATAATAAAGCATTG+AGG | + | chr3.1:26915877-26915896 | None:intergenic | 20.0% |
| !!! | TAGTTCTAATACTTTTGAAT+AGG | - | chr3.1:26911702-26911721 | MS.gene45603:intron | 20.0% |
| !!! | TATTGAATCTTTTTTCTCAT+GGG | - | chr3.1:26914238-26914257 | MS.gene45603:intron | 20.0% |
| !!! | TATTTGAGACTATTTTTTTC+AGG | + | chr3.1:26914504-26914523 | None:intergenic | 20.0% |
| !!! | TCATTTTCCAAAATAGTTAT+TGG | + | chr3.1:26915634-26915653 | None:intergenic | 20.0% |
| !!! | TGTATCTAGTAATTTGAAAT+GGG | + | chr3.1:26915576-26915595 | None:intergenic | 20.0% |
| !!! | TTATTGAATCTTTTTTCTCA+TGG | - | chr3.1:26914237-26914256 | MS.gene45603:intron | 20.0% |
| !!! | TTCTAAAACAAAAATATCAG+GGG | + | chr3.1:26911212-26911231 | None:intergenic | 20.0% |
| !!! | TTCTGGAAAAATAATTTGAA+TGG | - | chr3.1:26913969-26913988 | MS.gene45603:CDS | 20.0% |
| ! | AAAACAGGTAAGAAGAATAA+TGG | - | chr3.1:26914263-26914282 | MS.gene45603:intron | 25.0% |
| ! | AACAAGAAAATGGAAAGAAA+TGG | + | chr3.1:26914330-26914349 | None:intergenic | 25.0% |
| ! | AAGTTGTGTATTTAATGCAT+TGG | + | chr3.1:26912954-26912973 | None:intergenic | 25.0% |
| ! | ACAGTCAGTTAATACTAATT+TGG | - | chr3.1:26914113-26914132 | MS.gene45603:intron | 25.0% |
| ! | ACATATCTCATTCTTACAAA+TGG | - | chr3.1:26911678-26911697 | MS.gene45603:intron | 25.0% |
| ! | AGTTAATAGGAACAGAAATT+AGG | + | chr3.1:26913310-26913329 | None:intergenic | 25.0% |
| ! | CAATTCCAGTAACTAAAATA+CGG | + | chr3.1:26915998-26916017 | None:intergenic | 25.0% |
| ! | CAGTCAGTTAATACTAATTT+GGG | - | chr3.1:26914114-26914133 | MS.gene45603:intron | 25.0% |
| ! | CTAATAATCAACCAAACAAA+TGG | - | chr3.1:26911758-26911777 | MS.gene45603:intron | 25.0% |
| ! | GATTATTGTTCTCATTTGTT+AGG | - | chr3.1:26912698-26912717 | MS.gene45603:CDS | 25.0% |
| ! | GATTTCGATAGAAATTTCTA+AGG | + | chr3.1:26915104-26915123 | None:intergenic | 25.0% |
| ! | GTGATTCAAGAGAATAATAA+GGG | - | chr3.1:26911448-26911467 | MS.gene45603:intron | 25.0% |
| ! | TAGTTATTGGTATTAATAGG+GGG | + | chr3.1:26915621-26915640 | None:intergenic | 25.0% |
| ! | TATATAGTTTAGTACTTCTG+AGG | + | chr3.1:26916139-26916158 | None:intergenic | 25.0% |
| ! | TATGATAATTAGTGTAGATG+AGG | - | chr3.1:26914671-26914690 | MS.gene45603:intron | 25.0% |
| ! | TCCATTTAGTTAGTGATAAA+AGG | - | chr3.1:26914166-26914185 | MS.gene45603:intron | 25.0% |
| ! | TGATCCAATAAAACATACTT+CGG | + | chr3.1:26910971-26910990 | None:intergenic | 25.0% |
| ! | TGATTCAAGAGAATAATAAG+GGG | - | chr3.1:26911449-26911468 | MS.gene45603:intron | 25.0% |
| ! | TTTACCACTATTGGAAATAT+AGG | - | chr3.1:26912336-26912355 | MS.gene45603:intron | 25.0% |
| !! | AATAAAACCATACCTTTTGA+AGG | - | chr3.1:26911115-26911134 | MS.gene45603:CDS | 25.0% |
| !! | ACCTTTTATCACTAACTAAA+TGG | + | chr3.1:26914170-26914189 | None:intergenic | 25.0% |
| !! | ATAACTCATTTTACCACTAT+TGG | - | chr3.1:26912327-26912346 | MS.gene45603:intron | 25.0% |
| !! | CATTGAGGATTTTCAATTTT+GGG | + | chr3.1:26915862-26915881 | None:intergenic | 25.0% |
| !! | CTTGTTATATATATTCCAGA+TGG | - | chr3.1:26914952-26914971 | MS.gene45603:intron | 25.0% |
| !! | GCAAATATTGACTATATTTC+TGG | - | chr3.1:26913865-26913884 | MS.gene45603:CDS | 25.0% |
| !! | GTATCTAGTAATTTGAAATG+GGG | + | chr3.1:26915575-26915594 | None:intergenic | 25.0% |
| !! | GTTGTATTTAAAATCACAGA+AGG | + | chr3.1:26911601-26911620 | None:intergenic | 25.0% |
| !! | TCAAATGCTTTCTCTTTTAA+AGG | - | chr3.1:26911284-26911303 | MS.gene45603:CDS | 25.0% |
| !! | TCTAATACTTTTGAATAGGA+AGG | - | chr3.1:26911706-26911725 | MS.gene45603:intron | 25.0% |
| !! | TTAATTCTGGCATACATTTT+AGG | - | chr3.1:26915436-26915455 | MS.gene45603:intron | 25.0% |
| !! | TTCAACCATCTAATTTTTCA+AGG | + | chr3.1:26915835-26915854 | None:intergenic | 25.0% |
| !!! | ATTTTACTTTTAGTCACAGT+TGG | - | chr3.1:26915035-26915054 | MS.gene45603:intron | 25.0% |
| !!! | GATTGGTTATTTGGTTTTAA+TGG | - | chr3.1:26915057-26915076 | MS.gene45603:CDS | 25.0% |
| !!! | TAAAATGTTTTGATTGACCA+TGG | - | chr3.1:26915731-26915750 | MS.gene45603:intron | 25.0% |
| !!! | TGTAATAGTTGACTTTTTGA+AGG | + | chr3.1:26912927-26912946 | None:intergenic | 25.0% |
| AAACAAATCTAGGTGAACAA+TGG | + | chr3.1:26916097-26916116 | None:intergenic | 30.0% | |
| AAGTCCTTTAATACCTACAA+TGG | - | chr3.1:26913188-26913207 | MS.gene45603:intron | 30.0% | |
| AATGACAGTTTAGTCAACAT+TGG | - | chr3.1:26913402-26913421 | MS.gene45603:intron | 30.0% | |
| AATGTCTTGAATGTGAAAGT+TGG | - | chr3.1:26913580-26913599 | MS.gene45603:intron | 30.0% | |
| ACACAGATTAAGGATTTGAT+TGG | - | chr3.1:26911555-26911574 | MS.gene45603:intron | 30.0% | |
| ACATTTCCCATAGTTTATAG+TGG | - | chr3.1:26913025-26913044 | MS.gene45603:CDS | 30.0% | |
| AGTCCTTTAATACCTACAAT+GGG | - | chr3.1:26913189-26913208 | MS.gene45603:intron | 30.0% | |
| ATACCCATTGTAGGTATTAA+AGG | + | chr3.1:26913195-26913214 | None:intergenic | 30.0% | |
| ATTGATAGAGATATGTCAGA+GGG | + | chr3.1:26913765-26913784 | None:intergenic | 30.0% | |
| ATTTGAATCACCTAGCTAAA+TGG | + | chr3.1:26911270-26911289 | None:intergenic | 30.0% | |
| CACGAAACATTCAGATATAA+AGG | + | chr3.1:26915332-26915351 | None:intergenic | 30.0% | |
| CATATCTCTATCAATCTTCT+TGG | - | chr3.1:26913770-26913789 | MS.gene45603:intron | 30.0% | |
| CATCATCATGATATAAAAGC+AGG | + | chr3.1:26912159-26912178 | None:intergenic | 30.0% | |
| CATTTCCCATAGTTTATAGT+GGG | - | chr3.1:26913026-26913045 | MS.gene45603:CDS | 30.0% | |
| CGAGGTTCAAATATATTTAG+TGG | + | chr3.1:26913483-26913502 | None:intergenic | 30.0% | |
| GAAAACATATGATCTGTGTT+AGG | - | chr3.1:26912672-26912691 | MS.gene45603:intron | 30.0% | |
| GAGAAGATATTTCATGGTAT+GGG | + | chr3.1:26914540-26914559 | None:intergenic | 30.0% | |
| GATTTGTCTATTGATCTTCT+AGG | - | chr3.1:26914395-26914414 | MS.gene45603:intron | 30.0% | |
| GGATATAGTTACACAGATTA+AGG | - | chr3.1:26911545-26911564 | MS.gene45603:intron | 30.0% | |
| GGTGATTCAAGAGAATAATA+AGG | - | chr3.1:26911447-26911466 | MS.gene45603:intron | 30.0% | |
| GTATATAATTTCCATGTGTC+AGG | - | chr3.1:26913796-26913815 | MS.gene45603:intron | 30.0% | |
| GTATATGTACAAATGTGAAG+AGG | + | chr3.1:26911807-26911826 | None:intergenic | 30.0% | |
| GTATTAATAGGGGGTTTATT+TGG | + | chr3.1:26915612-26915631 | None:intergenic | 30.0% | |
| GTTATAATAGATGCTTCAAC+AGG | - | chr3.1:26914417-26914436 | MS.gene45603:intron | 30.0% | |
| TAGCAATTGTTACATGGTAA+AGG | - | chr3.1:26913903-26913922 | MS.gene45603:CDS | 30.0% | |
| TAGCTCAAAATTGCAACATT+TGG | - | chr3.1:26914022-26914041 | MS.gene45603:intron | 30.0% | |
| TATCAAATGCAATGAAACAG+TGG | + | chr3.1:26912414-26912433 | None:intergenic | 30.0% | |
| TATCAGATTAAACTGAGTTG+AGG | + | chr3.1:26913232-26913251 | None:intergenic | 30.0% | |
| TATCATGTAGTAATTCCCTT+CGG | - | chr3.1:26912432-26912451 | MS.gene45603:intron | 30.0% | |
| TCAACCTATATTTCCAATAG+TGG | + | chr3.1:26912343-26912362 | None:intergenic | 30.0% | |
| TCACGAATTCGAACTATAAT+AGG | - | chr3.1:26913057-26913076 | MS.gene45603:intron | 30.0% | |
| TCTATATAAAATCGACCATC+TGG | + | chr3.1:26914619-26914638 | None:intergenic | 30.0% | |
| TGAAATGGGGATTATATTGA+GGG | + | chr3.1:26915562-26915581 | None:intergenic | 30.0% | |
| TGTAACAATTGCTAAAACTC+AGG | + | chr3.1:26913897-26913916 | None:intergenic | 30.0% | |
| TTACCAAATAAAGTCTCACA+TGG | - | chr3.1:26914761-26914780 | MS.gene45603:CDS | 30.0% | |
| TTATGTGCATTGTTCTCATA+TGG | - | chr3.1:26914847-26914866 | MS.gene45603:CDS | 30.0% | |
| TTCATGTCTATTTCAGTCAA+TGG | - | chr3.1:26912607-26912626 | MS.gene45603:intron | 30.0% | |
| TTGAAATGGGGATTATATTG+AGG | + | chr3.1:26915563-26915582 | None:intergenic | 30.0% | |
| TTGACTGAAATAGACATGAA+CGG | + | chr3.1:26912607-26912626 | None:intergenic | 30.0% | |
| ! | AAAGAGTACATCTTGCATAT+TGG | + | chr3.1:26915791-26915810 | None:intergenic | 30.0% |
| ! | AAATTGTCTGAAACTCTGAA+TGG | - | chr3.1:26914203-26914222 | MS.gene45603:intron | 30.0% |
| ! | ACAGATCATATGTTTTCCTA+TGG | + | chr3.1:26912669-26912688 | None:intergenic | 30.0% |
| ! | GATCTCTTTGGTAGTTTATA+GGG | - | chr3.1:26911183-26911202 | MS.gene45603:intron | 30.0% |
| ! | GCATTGAGGATTTTCAATTT+TGG | + | chr3.1:26915863-26915882 | None:intergenic | 30.0% |
| ! | GCTTAGATTTTCCTATAAGT+CGG | - | chr3.1:26915896-26915915 | MS.gene45603:intron | 30.0% |
| ! | TATTTTTCCAGAATCCAATC+AGG | + | chr3.1:26913962-26913981 | None:intergenic | 30.0% |
| ! | TCTTTGCCAAAATTTGAAAC+CGG | - | chr3.1:26915806-26915825 | MS.gene45603:intron | 30.0% |
| ! | TGATCTCTTTGGTAGTTTAT+AGG | - | chr3.1:26911182-26911201 | MS.gene45603:intron | 30.0% |
| ! | TTTTAAATACAACCCCTGTA+TGG | - | chr3.1:26911608-26911627 | MS.gene45603:intron | 30.0% |
| ! | TTTTTCTCATGGGAAAAAAC+AGG | - | chr3.1:26914248-26914267 | MS.gene45603:intron | 30.0% |
| !! | AGATGGTCGATTTTATATAG+AGG | - | chr3.1:26914618-26914637 | MS.gene45603:intron | 30.0% |
| !! | GAGTTTTAGCAATTGTTACA+TGG | - | chr3.1:26913897-26913916 | MS.gene45603:CDS | 30.0% |
| !!! | ATCTAATTTTTCAAGGTTCC+CGG | + | chr3.1:26915828-26915847 | None:intergenic | 30.0% |
| !!! | ATGGTTTTATTGAACTGCTT+TGG | + | chr3.1:26911106-26911125 | None:intergenic | 30.0% |
| !!! | TCAGTTTTTTCTTACTAGGT+GGG | - | chr3.1:26911235-26911254 | MS.gene45603:intron | 30.0% |
| !!! | TCTTTCCATTTTTCGAGAAA+GGG | - | chr3.1:26914718-26914737 | MS.gene45603:CDS | 30.0% |
| !!! | TTCAGTTTTTTCTTACTAGG+TGG | - | chr3.1:26911234-26911253 | MS.gene45603:intron | 30.0% |
| !!! | TTCTTTCCATTTTTCGAGAA+AGG | - | chr3.1:26914717-26914736 | MS.gene45603:CDS | 30.0% |
| !!! | TTGGTGATTAGTTTTCCTTT+CGG | - | chr3.1:26913599-26913618 | MS.gene45603:intron | 30.0% |
| !!! | TTGTACCGTATTTTAGTTAC+TGG | - | chr3.1:26915990-26916009 | MS.gene45603:intron | 30.0% |
| AACCATCCCACTATAAACTA+TGG | + | chr3.1:26913035-26913054 | None:intergenic | 35.0% | |
| AACTTCCCTTTCTCGAAAAA+TGG | + | chr3.1:26914726-26914745 | None:intergenic | 35.0% | |
| AAGAGAATAATAAGGGGAAG+TGG | - | chr3.1:26911455-26911474 | MS.gene45603:intron | 35.0% | |
| AAGTCACAAATACCCATTGT+AGG | + | chr3.1:26913204-26913223 | None:intergenic | 35.0% | |
| ACAACATCCATGACAAAAAG+AGG | + | chr3.1:26913441-26913460 | None:intergenic | 35.0% | |
| ACAGACGAGAAGATATTTCA+TGG | + | chr3.1:26914546-26914565 | None:intergenic | 35.0% | |
| ACCATCCCACTATAAACTAT+GGG | + | chr3.1:26913034-26913053 | None:intergenic | 35.0% | |
| ACCTAATTGAACATGTTCTG+GGG | + | chr3.1:26912763-26912782 | None:intergenic | 35.0% | |
| ACTCCATGTGAGACTTTATT+TGG | + | chr3.1:26914767-26914786 | None:intergenic | 35.0% | |
| AGATATTTCATGGTATGGGA+AGG | + | chr3.1:26914536-26914555 | None:intergenic | 35.0% | |
| AGCAAAAAAGTAGACTGCAA+TGG | + | chr3.1:26912024-26912043 | None:intergenic | 35.0% | |
| ATCATGTAGTAATTCCCTTC+GGG | - | chr3.1:26912433-26912452 | MS.gene45603:intron | 35.0% | |
| ATGAAATAGGTACAGACACA+AGG | + | chr3.1:26911375-26911394 | None:intergenic | 35.0% | |
| ATTGTGTCATATGACCATAC+AGG | + | chr3.1:26911625-26911644 | None:intergenic | 35.0% | |
| ATTTAGTGGAAACCTTTGAC+AGG | + | chr3.1:26913469-26913488 | None:intergenic | 35.0% | |
| CAAAAATTACCAGACCTGAT+TGG | - | chr3.1:26913945-26913964 | MS.gene45603:CDS | 35.0% | |
| CAAAATTGCAACATTTGGAG+AGG | - | chr3.1:26914027-26914046 | MS.gene45603:intron | 35.0% | |
| CAACATCCATGACAAAAAGA+GGG | + | chr3.1:26913440-26913459 | None:intergenic | 35.0% | |
| CACCTAATTGAACATGTTCT+GGG | + | chr3.1:26912764-26912783 | None:intergenic | 35.0% | |
| CATACAAAAGAACTTTCCAG+AGG | - | chr3.1:26913356-26913375 | MS.gene45603:intron | 35.0% | |
| CATATGTAAATAGTAGCTGC+TGG | - | chr3.1:26911515-26911534 | MS.gene45603:intron | 35.0% | |
| CGAGAAGATATTTCATGGTA+TGG | + | chr3.1:26914541-26914560 | None:intergenic | 35.0% | |
| GAAATGGGGATTATATTGAG+GGG | + | chr3.1:26915561-26915580 | None:intergenic | 35.0% | |
| GAGAAACAAGAGTGAAGATA+AGG | + | chr3.1:26912133-26912152 | None:intergenic | 35.0% | |
| GATTGATAGAGATATGTCAG+AGG | + | chr3.1:26913766-26913785 | None:intergenic | 35.0% | |
| GCAAAAAAGTAGACTGCAAT+GGG | + | chr3.1:26912023-26912042 | None:intergenic | 35.0% | |
| GCACACTAAATGACTAGTAA+AGG | + | chr3.1:26912382-26912401 | None:intergenic | 35.0% | |
| GGGAACCTTGAAAAATTAGA+TGG | - | chr3.1:26915827-26915846 | MS.gene45603:intron | 35.0% | |
| GTGAATGTGCAATACCTAAA+AGG | + | chr3.1:26912284-26912303 | None:intergenic | 35.0% | |
| GTTATAGACTTATGGTGAGT+TGG | - | chr3.1:26913502-26913521 | MS.gene45603:intron | 35.0% | |
| TAAATGCTTGTGTATGAGCT+TGG | - | chr3.1:26911922-26911941 | MS.gene45603:CDS | 35.0% | |
| TAATGCTCTTCTTCTGGTAA+GGG | - | chr3.1:26911139-26911158 | MS.gene45603:intron | 35.0% | |
| TATAACTGCATAAACCAACG+TGG | + | chr3.1:26914888-26914907 | None:intergenic | 35.0% | |
| TATATTCTACTGCATGGTGT+AGG | - | chr3.1:26914581-26914600 | MS.gene45603:CDS | 35.0% | |
| TATCTATTGCAGCTAATCCA+TGG | + | chr3.1:26915751-26915770 | None:intergenic | 35.0% | |
| TCACCTAATTGAACATGTTC+TGG | + | chr3.1:26912765-26912784 | None:intergenic | 35.0% | |
| TGAACCTCGTTATAGACTTA+TGG | - | chr3.1:26913494-26913513 | MS.gene45603:intron | 35.0% | |
| TGCATTGTTCTCATATGGTT+TGG | - | chr3.1:26914852-26914871 | MS.gene45603:CDS | 35.0% | |
| TGTGTCTGTACCTATTTCAT+GGG | - | chr3.1:26911375-26911394 | MS.gene45603:intron | 35.0% | |
| TGTTGAAGAGTCAATGTTCA+TGG | - | chr3.1:26915004-26915023 | MS.gene45603:intron | 35.0% | |
| TTGGAAAAATTCAACCACGT+TGG | - | chr3.1:26914871-26914890 | MS.gene45603:intron | 35.0% | |
| TTGTGTCATATGACCATACA+GGG | + | chr3.1:26911624-26911643 | None:intergenic | 35.0% | |
| TTGTGTCTGTACCTATTTCA+TGG | - | chr3.1:26911374-26911393 | MS.gene45603:intron | 35.0% | |
| TTGTTCTCACTTGATCTCTT+TGG | - | chr3.1:26911171-26911190 | MS.gene45603:intron | 35.0% | |
| TTTAGTGGAAACCTTTGACA+GGG | + | chr3.1:26913468-26913487 | None:intergenic | 35.0% | |
| ! | AAATTGCTTCACCCTGTTTT+TGG | - | chr3.1:26912088-26912107 | MS.gene45603:CDS | 35.0% |
| ! | ACAGTATCATCTAGTTCAAC+TGG | - | chr3.1:26912476-26912495 | MS.gene45603:intron | 35.0% |
| ! | ACATCTTGCATATTGGTCTA+AGG | + | chr3.1:26915784-26915803 | None:intergenic | 35.0% |
| ! | ACTTTTAGTCACAGTTGGAT+TGG | - | chr3.1:26915040-26915059 | MS.gene45603:CDS | 35.0% |
| ! | ATATATTCCAGATGGTCTTG+AGG | - | chr3.1:26914960-26914979 | MS.gene45603:intron | 35.0% |
| ! | ATTGATTCAAGGCTACGATT+TGG | + | chr3.1:26912827-26912846 | None:intergenic | 35.0% |
| ! | ATTTAAAGTGCTTAAACCCC+GGG | - | chr3.1:26912991-26913010 | MS.gene45603:intron | 35.0% |
| ! | CAGGTAAGAAGAATAATGGA+AGG | - | chr3.1:26914267-26914286 | MS.gene45603:intron | 35.0% |
| ! | CAGTATCATCTAGTTCAACT+GGG | - | chr3.1:26912477-26912496 | MS.gene45603:intron | 35.0% |
| ! | CATTTAAAGTGCTTAAACCC+CGG | - | chr3.1:26912990-26913009 | MS.gene45603:intron | 35.0% |
| ! | CTTGCCGAAGTATGTTTTAT+TGG | - | chr3.1:26910964-26910983 | MS.gene45603:intron | 35.0% |
| ! | CTTTGCCAAAATTTGAAACC+GGG | - | chr3.1:26915807-26915826 | MS.gene45603:intron | 35.0% |
| ! | GAATAATGGAAGGCAATCAT+CGG | - | chr3.1:26914277-26914296 | MS.gene45603:intron | 35.0% |
| !! | AGATATGTACAAGTACCGAA+AGG | + | chr3.1:26913617-26913636 | None:intergenic | 35.0% |
| !! | AGGAGCTTTGAAAGTATACT+TGG | + | chr3.1:26915084-26915103 | None:intergenic | 35.0% |
| !! | TCACAGTTGGATTGGTTATT+TGG | - | chr3.1:26915048-26915067 | MS.gene45603:CDS | 35.0% |
| !!! | AGTTTTTTCTTACTAGGTGG+GGG | - | chr3.1:26911237-26911256 | MS.gene45603:intron | 35.0% |
| !!! | CAGTTTTTTCTTACTAGGTG+GGG | - | chr3.1:26911236-26911255 | MS.gene45603:intron | 35.0% |
| !!! | CTATCATGTGCTTTTTCCAA+AGG | - | chr3.1:26913708-26913727 | MS.gene45603:intron | 35.0% |
| !!! | GACTTCAAGTTGATCCTTTT+AGG | - | chr3.1:26912267-26912286 | MS.gene45603:intron | 35.0% |
| AAACCCAAGAATCGCTGTAA+AGG | + | chr3.1:26911733-26911752 | None:intergenic | 40.0% | |
| AAATAGGTACAGACACAAGG+TGG | + | chr3.1:26911372-26911391 | None:intergenic | 40.0% | |
| AAATCACACACAGTGACAGA+TGG | + | chr3.1:26914380-26914399 | None:intergenic | 40.0% | |
| AATAGGTACAGACACAAGGT+GGG | + | chr3.1:26911371-26911390 | None:intergenic | 40.0% | |
| AATAGTAGCTGCTGGCATTT+AGG | - | chr3.1:26911523-26911542 | MS.gene45603:intron | 40.0% | |
| ACAGGTTCATTAGCAGAGTT+TGG | - | chr3.1:26914435-26914454 | MS.gene45603:intron | 40.0% | |
| AGAAGGGACAAAAGAAAGAG+AGG | - | chr3.1:26915400-26915419 | MS.gene45603:intron | 40.0% | |
| AGGAGATCCAATCTTTCTGA+AGG | + | chr3.1:26916382-26916401 | None:intergenic | 40.0% | |
| AGGCTTCTTCATAATCACAG+TGG | + | chr3.1:26911787-26911806 | None:intergenic | 40.0% | |
| ATAAGGGTCATCCGACTTAT+AGG | + | chr3.1:26915910-26915929 | None:intergenic | 40.0% | |
| ATAGTAGCTGCTGGCATTTA+GGG | - | chr3.1:26911524-26911543 | MS.gene45603:intron | 40.0% | |
| ATCGTGTTGCAGAAGTTGAA+TGG | - | chr3.1:26915357-26915376 | MS.gene45603:intron | 40.0% | |
| ATGGACAAAGGCCAAAAACA+GGG | + | chr3.1:26912102-26912121 | None:intergenic | 40.0% | |
| ATGGGGAACTCTTGAATGTA+GGG | - | chr3.1:26911393-26911412 | MS.gene45603:intron | 40.0% | |
| ATGTTGTCTTACCCTGTCAA+AGG | - | chr3.1:26913454-26913473 | MS.gene45603:intron | 40.0% | |
| ATTTCATGGTATGGGAAGGA+GGG | + | chr3.1:26914532-26914551 | None:intergenic | 40.0% | |
| ATTTCGTAACCTCCGTTCTT+GGG | - | chr3.1:26915232-26915251 | MS.gene45603:intron | 40.0% | |
| CACAGTGGTAACCATTTGTT+TGG | + | chr3.1:26911772-26911791 | None:intergenic | 40.0% | |
| CATCATCATCCTCAGAACAT+AGG | - | chr3.1:26910914-26910933 | MS.gene45603:CDS | 40.0% | |
| CGGGGTTTAAGCACTTTAAA+TGG | + | chr3.1:26912992-26913011 | None:intergenic | 40.0% | |
| CTAATGCTCTTCTTCTGGTA+AGG | - | chr3.1:26911138-26911157 | MS.gene45603:intron | 40.0% | |
| CTATTTCAGTCAATGGATCG+TGG | - | chr3.1:26912614-26912633 | MS.gene45603:intron | 40.0% | |
| CTCACCATAAGTCTATAACG+AGG | + | chr3.1:26913501-26913520 | None:intergenic | 40.0% | |
| CTGTAGTATCTCTAATGCGT+AGG | + | chr3.1:26916402-26916421 | None:intergenic | 40.0% | |
| GAAATCACAGAGTAAGTGCT+TGG | - | chr3.1:26914468-26914487 | MS.gene45603:intron | 40.0% | |
| GAGAAACTCGTGAATGTTGA+AGG | - | chr3.1:26916189-26916208 | MS.gene45603:CDS | 40.0% | |
| GCAAAATGAATGTCCACATG+GGG | + | chr3.1:26912585-26912604 | None:intergenic | 40.0% | |
| GCAGTTAGAGAAATATGACG+TGG | - | chr3.1:26912223-26912242 | MS.gene45603:intron | 40.0% | |
| GGCAAAATGAATGTCCACAT+GGG | + | chr3.1:26912586-26912605 | None:intergenic | 40.0% | |
| GTGCAGTACAAAGTACATCA+AGG | + | chr3.1:26911948-26911967 | None:intergenic | 40.0% | |
| GTGTCTGTACCTATTTCATG+GGG | - | chr3.1:26911376-26911395 | MS.gene45603:intron | 40.0% | |
| TAAAATCGACCATCTGGAAG+TGG | + | chr3.1:26914613-26914632 | None:intergenic | 40.0% | |
| TAGAGAAATATGACGTGGCT+CGG | - | chr3.1:26912228-26912247 | MS.gene45603:intron | 40.0% | |
| TATTTCATGGTATGGGAAGG+AGG | + | chr3.1:26914533-26914552 | None:intergenic | 40.0% | |
| TCAAGAGTTCCCCATGAAAT+AGG | + | chr3.1:26911388-26911407 | None:intergenic | 40.0% | |
| TCACACTAGCAGCAGTTAAT+AGG | + | chr3.1:26913323-26913342 | None:intergenic | 40.0% | |
| TCTTGACAACCATTTCAGCT+GGG | - | chr3.1:26911050-26911069 | MS.gene45603:intron | 40.0% | |
| TGCAGAAGTTGAATGGATAC+AGG | - | chr3.1:26915364-26915383 | MS.gene45603:intron | 40.0% | |
| TGTGTCATATGACCATACAG+GGG | + | chr3.1:26911623-26911642 | None:intergenic | 40.0% | |
| TTCCAGAGGAATATGCTGAA+AGG | - | chr3.1:26913370-26913389 | MS.gene45603:intron | 40.0% | |
| TTCCTTTCAGCATATTCCTC+TGG | + | chr3.1:26913375-26913394 | None:intergenic | 40.0% | |
| TTCTTGACAACCATTTCAGC+TGG | - | chr3.1:26911049-26911068 | MS.gene45603:intron | 40.0% | |
| ! | AGGTTCCCGGTTTCAAATTT+TGG | + | chr3.1:26915815-26915834 | None:intergenic | 40.0% |
| ! | GCATACATTTTAGGCTGCAT+AGG | - | chr3.1:26915445-26915464 | MS.gene45603:intron | 40.0% |
| ! | GGGTTGATTTCCATTTAGCT+AGG | - | chr3.1:26911257-26911276 | MS.gene45603:CDS | 40.0% |
| ! | TACATTTTAGGCTGCATAGG+AGG | - | chr3.1:26915448-26915467 | MS.gene45603:intron | 40.0% |
| ! | TATCATCTAGTTCAACTGGG+AGG | - | chr3.1:26912480-26912499 | MS.gene45603:intron | 40.0% |
| ! | TATGCTCCCTCTTTTTGTCA+TGG | - | chr3.1:26913431-26913450 | MS.gene45603:intron | 40.0% |
| ! | TCCCATAGTTTATAGTGGGA+TGG | - | chr3.1:26913030-26913049 | MS.gene45603:CDS | 40.0% |
| ! | TCTCTTTCTTTTGTCCCTTC+TGG | + | chr3.1:26915401-26915420 | None:intergenic | 40.0% |
| ! | TCTTTGAAGACATTCCCGAA+GGG | + | chr3.1:26912450-26912469 | None:intergenic | 40.0% |
| ! | TTTAAAGTGCTTAAACCCCG+GGG | - | chr3.1:26912992-26913011 | MS.gene45603:intron | 40.0% |
| !! | ACTTATGGTGAGTTGGTCAA+TGG | - | chr3.1:26913509-26913528 | MS.gene45603:intron | 40.0% |
| !! | GAAGAGCATTAGCCTTCAAA+AGG | + | chr3.1:26911130-26911149 | None:intergenic | 40.0% |
| !! | GCATTAGCCTTCAAAAGGTA+TGG | + | chr3.1:26911125-26911144 | None:intergenic | 40.0% |
| !!! | TGTTTTTGGCCTTTGTCCAT+GGG | - | chr3.1:26912102-26912121 | MS.gene45603:intron | 40.0% |
| AATGGAAGGCAATCATCGGA+TGG | - | chr3.1:26914281-26914300 | MS.gene45603:intron | 45.0% | |
| ACCATTTCAGCTGGGTTTGA+AGG | - | chr3.1:26911058-26911077 | MS.gene45603:intron | 45.0% | |
| ACCCATCTTGATCCCAAGAA+CGG | + | chr3.1:26915247-26915266 | None:intergenic | 45.0% | |
| ACTCAATGGCCTATGTTCTG+AGG | + | chr3.1:26910926-26910945 | None:intergenic | 45.0% | |
| AGAGAAATATGACGTGGCTC+GGG | - | chr3.1:26912229-26912248 | MS.gene45603:intron | 45.0% | |
| AGGACCTTTACAGCGATTCT+TGG | - | chr3.1:26911726-26911745 | MS.gene45603:intron | 45.0% | |
| AGGATATTATGCCGCCAGAA+GGG | - | chr3.1:26915384-26915403 | MS.gene45603:intron | 45.0% | |
| ATGGAAGGCAATCATCGGAT+GGG | - | chr3.1:26914282-26914301 | MS.gene45603:intron | 45.0% | |
| ATGTGCAGATTGAAGGTCGT+AGG | - | chr3.1:26915207-26915226 | MS.gene45603:intron | 45.0% | |
| CACACAGTGACAGATGGATA+TGG | + | chr3.1:26914374-26914393 | None:intergenic | 45.0% | |
| CAGAACATAGGCCATTGAGT+GGG | - | chr3.1:26910926-26910945 | MS.gene45603:CDS | 45.0% | |
| CATGGACAAAGGCCAAAAAC+AGG | + | chr3.1:26912103-26912122 | None:intergenic | 45.0% | |
| CATGGGGAACTCTTGAATGT+AGG | - | chr3.1:26911392-26911411 | MS.gene45603:intron | 45.0% | |
| CGGCAAAATGAATGTCCACA+TGG | + | chr3.1:26912587-26912606 | None:intergenic | 45.0% | |
| CGGGTTCATACAGTAACTTC+AGG | + | chr3.1:26912556-26912575 | None:intergenic | 45.0% | |
| GAAGGCTAATGCTCTTCTTC+TGG | - | chr3.1:26911133-26911152 | MS.gene45603:CDS | 45.0% | |
| GAGAAATCCTCAAGACCATC+TGG | + | chr3.1:26914970-26914989 | None:intergenic | 45.0% | |
| GATTTCGTAACCTCCGTTCT+TGG | - | chr3.1:26915231-26915250 | MS.gene45603:intron | 45.0% | |
| GCCCCAGAACATGTTCAATT+AGG | - | chr3.1:26912759-26912778 | MS.gene45603:intron | 45.0% | |
| GCTAAAGAAGCAGCAAGACA+AGG | - | chr3.1:26916060-26916079 | MS.gene45603:intron | 45.0% | |
| GCTCGGGATGTTATTCTTTC+TGG | - | chr3.1:26912245-26912264 | MS.gene45603:intron | 45.0% | |
| GGACCTTTACAGCGATTCTT+GGG | - | chr3.1:26911727-26911746 | MS.gene45603:intron | 45.0% | |
| GTTGGACATGGCATGTGTTA+TGG | - | chr3.1:26911426-26911445 | MS.gene45603:intron | 45.0% | |
| TAACCCATGTCGCTAGTTGA+GGG | - | chr3.1:26911338-26911357 | MS.gene45603:intron | 45.0% | |
| TACCAGACCTGATTGGATTC+TGG | - | chr3.1:26913952-26913971 | MS.gene45603:CDS | 45.0% | |
| TCAAAGTCATCATTCCGCTC+TGG | + | chr3.1:26912521-26912540 | None:intergenic | 45.0% | |
| TCAGAACATAGGCCATTGAG+TGG | - | chr3.1:26910925-26910944 | MS.gene45603:CDS | 45.0% | |
| TCCGTTCTTGGGATCAAGAT+GGG | - | chr3.1:26915243-26915262 | MS.gene45603:intron | 45.0% | |
| TCCTTCAAACCCAGCTGAAA+TGG | + | chr3.1:26911062-26911081 | None:intergenic | 45.0% | |
| TCGGGAATGTCTTCAAAGAG+TGG | - | chr3.1:26912451-26912470 | MS.gene45603:intron | 45.0% | |
| TCGTAGGCCTTCAGAAAGAT+TGG | - | chr3.1:26916372-26916391 | MS.gene45603:CDS | 45.0% | |
| TCTTGAATGTAGGGCAAGTG+TGG | - | chr3.1:26911402-26911421 | MS.gene45603:intron | 45.0% | |
| TGAAGATAAGGATCTGCCCA+TGG | + | chr3.1:26912121-26912140 | None:intergenic | 45.0% | |
| TTAACCCATGTCGCTAGTTG+AGG | - | chr3.1:26911337-26911356 | MS.gene45603:intron | 45.0% | |
| TTCCAGAATCCAATCAGGTC+TGG | + | chr3.1:26913957-26913976 | None:intergenic | 45.0% | |
| TTTCTTGGGTTCCTGACACA+TGG | + | chr3.1:26913810-26913829 | None:intergenic | 45.0% | |
| ! | ACATACTTCGGCAAGTGTTG+TGG | + | chr3.1:26910959-26910978 | None:intergenic | 45.0% |
| ! | ACCCAAAAACTAAAGCGCTC+GGG | + | chr3.1:26916237-26916256 | None:intergenic | 45.0% |
| ! | CACCCAAAAACTAAAGCGCT+CGG | + | chr3.1:26916238-26916257 | None:intergenic | 45.0% |
| ! | CATACTTCGGCAAGTGTTGT+GGG | + | chr3.1:26910958-26910977 | None:intergenic | 45.0% |
| ! | CTCTTTGAAGACATTCCCGA+AGG | + | chr3.1:26912451-26912470 | None:intergenic | 45.0% |
| ! | CTTTCTTTTGTCCCTTCTGG+CGG | + | chr3.1:26915398-26915417 | None:intergenic | 45.0% |
| ! | TTAAAGTGCTTAAACCCCGG+GGG | - | chr3.1:26912993-26913012 | MS.gene45603:intron | 45.0% |
| !! | GAAAGTGCTCGAACATGGAT+AGG | - | chr3.1:26916033-26916052 | MS.gene45603:intron | 45.0% |
| !! | GAATGCCTAGAGAAGTGCTA+TGG | + | chr3.1:26913689-26913708 | None:intergenic | 45.0% |
| !!! | CGCTGCAGTTTTGTTGTGTT+TGG | - | chr3.1:26915299-26915318 | MS.gene45603:intron | 45.0% |
| !!! | CTGTTTTTGGCCTTTGTCCA+TGG | - | chr3.1:26912101-26912120 | MS.gene45603:intron | 45.0% |
| !! | TTTAATTAATATATTCTATT+AGG | + | chr3.1:26911893-26911912 | None:intergenic | 5.0% |
| AAATGTTAACGAGTGCCCCC+GGG | + | chr3.1:26913011-26913030 | None:intergenic | 50.0% | |
| AACCCATGTCGCTAGTTGAG+GGG | - | chr3.1:26911339-26911358 | MS.gene45603:intron | 50.0% | |
| AAGGATCTGCCCATGGACAA+AGG | + | chr3.1:26912114-26912133 | None:intergenic | 50.0% | |
| ACAGTGCAAAGTAGCGAGTG+TGG | + | chr3.1:26912055-26912074 | None:intergenic | 50.0% | |
| ACCGTCCATAGCACTTCTCT+AGG | - | chr3.1:26913681-26913700 | MS.gene45603:intron | 50.0% | |
| AGCAGAACTGTCCTGCACAA+TGG | + | chr3.1:26912734-26912753 | None:intergenic | 50.0% | |
| AGCAGAGTTTGGCTGTGAAG+TGG | - | chr3.1:26914446-26914465 | MS.gene45603:intron | 50.0% | |
| AGGCAATCATCGGATGGGAA+TGG | - | chr3.1:26914287-26914306 | MS.gene45603:intron | 50.0% | |
| ATGTAGGGCAAGTGTGGAGT+TGG | - | chr3.1:26911408-26911427 | MS.gene45603:intron | 50.0% | |
| ATGTCCACATGGGGTTGTGA+CGG | + | chr3.1:26912576-26912595 | None:intergenic | 50.0% | |
| ATTCCCCTCAACTAGCGACA+TGG | + | chr3.1:26911345-26911364 | None:intergenic | 50.0% | |
| ATTTGGAGAGGATCGAGGAC+TGG | - | chr3.1:26914039-26914058 | MS.gene45603:intron | 50.0% | |
| CAGGATATTATGCCGCCAGA+AGG | - | chr3.1:26915383-26915402 | MS.gene45603:intron | 50.0% | |
| CATCTTGATCCCAAGAACGG+AGG | + | chr3.1:26915244-26915263 | None:intergenic | 50.0% | |
| CTCCGTTCTTGGGATCAAGA+TGG | - | chr3.1:26915242-26915261 | MS.gene45603:intron | 50.0% | |
| GAAATGTTAACGAGTGCCCC+CGG | + | chr3.1:26913012-26913031 | None:intergenic | 50.0% | |
| GAAGGATGCTGCAAAGCTTG+TGG | - | chr3.1:26911076-26911095 | MS.gene45603:CDS | 50.0% | |
| GCAACATTTGGAGAGGATCG+AGG | - | chr3.1:26914034-26914053 | MS.gene45603:intron | 50.0% | |
| GCAGAACTGTCCTGCACAAT+GGG | + | chr3.1:26912733-26912752 | None:intergenic | 50.0% | |
| GTACACATGCACAACCAGAG+CGG | - | chr3.1:26912504-26912523 | MS.gene45603:intron | 50.0% | |
| TGAAGGCCTACGATTCGAGA+GGG | + | chr3.1:26916365-26916384 | None:intergenic | 50.0% | |
| TTCCCCTCAACTAGCGACAT+GGG | + | chr3.1:26911344-26911363 | None:intergenic | 50.0% | |
| ! | CCCAAAAACTAAAGCGCTCG+GGG | + | chr3.1:26916236-26916255 | None:intergenic | 50.0% |
| !! | CAGCAGAAAGTGCTCGAACA+TGG | - | chr3.1:26916028-26916047 | MS.gene45603:intron | 50.0% |
| !! | GCCTAGAGAAGTGCTATGGA+CGG | + | chr3.1:26913685-26913704 | None:intergenic | 50.0% |
| !!! | ACCCCGAGCGCTTTAGTTTT+TGG | - | chr3.1:26916232-26916251 | MS.gene45603:CDS | 50.0% |
| !!! | CCCCGAGCGCTTTAGTTTTT+GGG | - | chr3.1:26916233-26916252 | MS.gene45603:CDS | 50.0% |
| AATGTTAACGAGTGCCCCCG+GGG | + | chr3.1:26913010-26913029 | None:intergenic | 55.0% | |
| AGGTGTGAGCCACTTCCAGA+TGG | - | chr3.1:26914601-26914620 | MS.gene45603:intron | 55.0% | |
| CGCTCGGGGTCTCTTAATGA+GGG | + | chr3.1:26916222-26916241 | None:intergenic | 55.0% | |
| CTGAAGGCCTACGATTCGAG+AGG | + | chr3.1:26916366-26916385 | None:intergenic | 55.0% | |
| GGAACAGATGCCCATTGTGC+AGG | - | chr3.1:26912720-26912739 | MS.gene45603:intron | 55.0% | |
| GGCAAGTGTGGAGTTGGACA+TGG | - | chr3.1:26911414-26911433 | MS.gene45603:intron | 55.0% | |
| GTGGGATCAAGCCCACTCAA+TGG | + | chr3.1:26910940-26910959 | None:intergenic | 55.0% | |
| TCGCTACCCTCTCGAATCGT+AGG | - | chr3.1:26916356-26916375 | MS.gene45603:CDS | 55.0% | |
| TGTCCACATGGGGTTGTGAC+GGG | + | chr3.1:26912575-26912594 | None:intergenic | 55.0% | |
| ! | GTCTTGTTATCGAGTGCCCC+CGG | - | chr3.1:26912866-26912885 | MS.gene45603:CDS | 55.0% |
| ! | TCTTGTTATCGAGTGCCCCC+GGG | - | chr3.1:26912867-26912886 | MS.gene45603:CDS | 55.0% |
| !! | ATCCTTAAAGAGTGCCCCGG+GGG | + | chr3.1:26912885-26912904 | None:intergenic | 55.0% |
| !! | GATCCTTAAAGAGTGCCCCG+GGG | + | chr3.1:26912886-26912905 | None:intergenic | 55.0% |
| !! | GGATCCTTAAAGAGTGCCCC+GGG | + | chr3.1:26912887-26912906 | None:intergenic | 55.0% |
| !! | GGGATCCTTAAAGAGTGCCC+CGG | + | chr3.1:26912888-26912907 | None:intergenic | 55.0% |
| GAACCCGTCACAACCCCATG+TGG | - | chr3.1:26912569-26912588 | MS.gene45603:intron | 60.0% | |
| GCGCTCGGGGTCTCTTAATG+AGG | + | chr3.1:26916223-26916242 | None:intergenic | 60.0% | |
| ! | CTTGTTATCGAGTGCCCCCG+GGG | - | chr3.1:26912868-26912887 | MS.gene45603:CDS | 60.0% |
| ! | TGCCCCCGGGGCACTCTTTA+AGG | - | chr3.1:26912880-26912899 | MS.gene45603:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 26910904 | 26916423 | 26910904 | ID=MS.gene45603 |
| chr3.1 | mRNA | 26910904 | 26916423 | 26910904 | ID=MS.gene45603.t1;Parent=MS.gene45603 |
| chr3.1 | exon | 26916355 | 26916423 | 26916355 | ID=MS.gene45603.t1.exon1;Parent=MS.gene45603.t1 |
| chr3.1 | CDS | 26916355 | 26916423 | 26916355 | ID=cds.MS.gene45603.t1;Parent=MS.gene45603.t1 |
| chr3.1 | exon | 26916173 | 26916259 | 26916173 | ID=MS.gene45603.t1.exon2;Parent=MS.gene45603.t1 |
| chr3.1 | CDS | 26916173 | 26916259 | 26916173 | ID=cds.MS.gene45603.t1;Parent=MS.gene45603.t1 |
| chr3.1 | exon | 26915039 | 26915100 | 26915039 | ID=MS.gene45603.t1.exon3;Parent=MS.gene45603.t1 |
| chr3.1 | CDS | 26915039 | 26915100 | 26915039 | ID=cds.MS.gene45603.t1;Parent=MS.gene45603.t1 |
| chr3.1 | exon | 26914692 | 26914885 | 26914692 | ID=MS.gene45603.t1.exon4;Parent=MS.gene45603.t1 |
| chr3.1 | CDS | 26914692 | 26914885 | 26914692 | ID=cds.MS.gene45603.t1;Parent=MS.gene45603.t1 |
| chr3.1 | exon | 26914547 | 26914607 | 26914547 | ID=MS.gene45603.t1.exon5;Parent=MS.gene45603.t1 |
| chr3.1 | CDS | 26914547 | 26914607 | 26914547 | ID=cds.MS.gene45603.t1;Parent=MS.gene45603.t1 |
| chr3.1 | exon | 26913812 | 26913989 | 26913812 | ID=MS.gene45603.t1.exon6;Parent=MS.gene45603.t1 |
| chr3.1 | CDS | 26913812 | 26913989 | 26913812 | ID=cds.MS.gene45603.t1;Parent=MS.gene45603.t1 |
| chr3.1 | exon | 26913019 | 26913057 | 26913019 | ID=MS.gene45603.t1.exon7;Parent=MS.gene45603.t1 |
| chr3.1 | CDS | 26913019 | 26913057 | 26913019 | ID=cds.MS.gene45603.t1;Parent=MS.gene45603.t1 |
| chr3.1 | exon | 26912849 | 26912910 | 26912849 | ID=MS.gene45603.t1.exon8;Parent=MS.gene45603.t1 |
| chr3.1 | CDS | 26912849 | 26912910 | 26912849 | ID=cds.MS.gene45603.t1;Parent=MS.gene45603.t1 |
| chr3.1 | exon | 26912688 | 26912724 | 26912688 | ID=MS.gene45603.t1.exon9;Parent=MS.gene45603.t1 |
| chr3.1 | CDS | 26912688 | 26912724 | 26912688 | ID=cds.MS.gene45603.t1;Parent=MS.gene45603.t1 |
| chr3.1 | exon | 26912063 | 26912112 | 26912063 | ID=MS.gene45603.t1.exon10;Parent=MS.gene45603.t1 |
| chr3.1 | CDS | 26912063 | 26912112 | 26912063 | ID=cds.MS.gene45603.t1;Parent=MS.gene45603.t1 |
| chr3.1 | exon | 26911903 | 26911972 | 26911903 | ID=MS.gene45603.t1.exon11;Parent=MS.gene45603.t1 |
| chr3.1 | CDS | 26911903 | 26911972 | 26911903 | ID=cds.MS.gene45603.t1;Parent=MS.gene45603.t1 |
| chr3.1 | exon | 26911246 | 26911321 | 26911246 | ID=MS.gene45603.t1.exon12;Parent=MS.gene45603.t1 |
| chr3.1 | CDS | 26911246 | 26911321 | 26911246 | ID=cds.MS.gene45603.t1;Parent=MS.gene45603.t1 |
| chr3.1 | exon | 26911073 | 26911152 | 26911073 | ID=MS.gene45603.t1.exon13;Parent=MS.gene45603.t1 |
| chr3.1 | CDS | 26911073 | 26911152 | 26911073 | ID=cds.MS.gene45603.t1;Parent=MS.gene45603.t1 |
| chr3.1 | exon | 26910904 | 26910972 | 26910904 | ID=MS.gene45603.t1.exon14;Parent=MS.gene45603.t1 |
| chr3.1 | CDS | 26910904 | 26910972 | 26910904 | ID=cds.MS.gene45603.t1;Parent=MS.gene45603.t1 |
| Gene Sequence |
| Protein sequence |
